Rh5AG457900

ABC transporter C family member

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5A
Physical Location & Seq
Forward (+)
78530561 .. 78541743
11183 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5AG457900.1

Sequence Viewer

Length: 1173 bp
ATGCAAAGGCACGAAAGGAATAATTGCAGGCAACTAAAGTCCAAGGAGGTTCCTGCGAAGCGTAAAGAGGTTCGTCAAGAATATCGTATAAAGAATAAAGTGCAGGAAACCCATGTTCAAGAGGCTAGCTTCTATGACGCACATGCCATTAACGATATTGACAGTAATGTTGTTACTTTGAATGCCATAGAGCAACCTTTGGCAGGTGATCAAGCTCTCCATTCCGGTAATGATCAAGTGGCTTCACCTAATGAGACTTCAATTCAGGCTCCCATCCAAAGTGATGTTGTTGTGGCTCTTGTAAATACTGTTTTGGAGGAAGCAGCGACAGAGGTTATGGAGGAACAAGCTCAAAGGGTAATGGAGGAGAATAATTCTAACCTAGCCTCTAATGATGCATCGGAGGCTTCAGACACAGATATTAGTGATTCACCTACTCGTACCTGGGGGAATATTTTTGAGGAGGAGAGGGTTGAAGGTTTGATCAGAGAGGCTCCTTCTAGTGCTCCACCAAGCCTGGGTCCACCTCCTGGTTTTGTCAAATCTCATGTGGCTTCAGAAATTGATGCGGTTGCAAGATTTGTTAATGGTGAGGATATGGATGGGTTTATTCCGCTTCAGAAGATGGATTCCGTGGACTTGACACTCACACTCCGTTTGCCGTCTGCCGAGGATGATCACAACAATGATCATCCTCAAGTTTTTCAGCATCCTCAATTTCCTCAGCTCGTCAACGCACCTGGTTCCCCCAACCTTACTCAGCGCTGCGGTTATGGAGCATCTGGGAATGTTCATGCGGGACAAAACTCTAGAATGAGTATTATTGACTTCCAGAGGTCAGTCTCTGTATCCCAGAGAAGGCAATCTGTGCTCCCTCACCCAACAAAAATGAAGGAGTACTGTGTCATAAACATCTCTAACCACAAAGCGAACGTCGGGGGATCTAGAAAAACAACAACACACTGTCGACGCCCTGTACCGAAGCCTGATAATCAGAACAGAATTTGCACGAACTTTAACTGTCGTGTAAGCGAAACTCCAATGTGGCGTAGAGGACCTTTGGGGCCAAAGACACTTTGCAACGCTTGCGGGATCAAGTATCGCAAGCTCAAGCTCAAGGAGGAGCAAGGGGAGGACCGGGAGGTATCTGCAGGAGAGGGCAGCTCTAATTGA

Protein Analysis

390

Amino Acids

43.2

Weight (kDa)

5.88

Isoelectric Point (pI)

52.85

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
GATA PF00320 340 - 372 3.3e-14 GATA zinc finger
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000044)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G07760 AT5G28823
fragaria_vesca FvH4_1g13572 FvH4_2g03281 FvH4_2g04691 FvH4_2g08332 FvH4_2g08333 FvH4_2g15313 FvH4_2g26101 FvH4_2g29541 FvH4_3g06911 FvH4_3g34351 FvH4_3g43733 FvH4_4g02432 FvH4_4g05601 FvH4_4g08213 FvH4_4g09961 FvH4_4g10131 FvH4_4g20001 FvH4_4g20002 FvH4_5g01051 FvH4_5g01401 FvH4_5g27943 FvH4_6g09220 FvH4_6g17383 FvH4_6g35491 FvH4_6g46421 FvH4_7g04151 FvH4_7g13962 FvH4_7g18611 FvH4_7g19491 FvH4_7g19511 FvH4_7g26562
malus_domestica MD06G1221600.v1.1
pyrus_communis pycom10g21150
rosa_chinensis RchiOBHm_Chr1g0337571 RchiOBHm_Chr2g0168771 RchiOBHm_Chr3g0453631 RchiOBHm_Chr6g0278581
rosa_laevigata RLG00000001899 RLG00000001925 RLG00000002026 RLG00000003410 RLG00000003767 RLG00000004304 RLG00000004473 RLG00000004677 RLG00000006856 RLG00000007994 RLG00000009888 RLG00000011627 RLG00000012174 RLG00000012217 RLG00000013118 RLG00000013736 RLG00000014194 RLG00000014251 RLG00000015011 RLG00000015057 RLG00000015235 RLG00000017416 RLG00000018052 RLG00000018537 RLG00000019968 RLG00000020096 RLG00000020263 RLG00000022606 RLG00000023119 RLG00000028111 RLG00000029686 RLG00000030126 RLG00000031124 RLG00000031236 RLG00000032766 RLG00000033171 RLG00000033548 RLG00000033987 RLG00000034062 RLG00000035115 RLG00000035863
rosa_multiflora Rmu_co8036712.1_g000001 Rmu_co8080248.1_g000001 Rmu_co8208334.1_g000001 Rmu_co8253451.1_g000001 Rmu_co8393241.1_g000001 Rmu_co8522225.1_g000005 Rmu_sc0000060.1_g000030 Rmu_sc0000060.1_g000031 Rmu_sc0000060.1_g000032 Rmu_sc0000090.1_g000008 Rmu_sc0000149.1_g000051 Rmu_sc0000149.1_g000058 Rmu_sc0000309.1_g000050 Rmu_sc0000370.1_g000022 Rmu_sc0000370.1_g000023 Rmu_sc0000370.1_g000024 Rmu_sc0000418.1_g000018 Rmu_sc0000427.1_g000014 Rmu_sc0000427.1_g000015 Rmu_sc0000434.1_g000008 Rmu_sc0000487.1_g000038 Rmu_sc0000487.1_g000039 Rmu_sc0000569.1_g000029 Rmu_sc0000580.1_g000097 Rmu_sc0000595.1_g000068 Rmu_sc0000607.1_g000027 Rmu_sc0000738.1_g000004 Rmu_sc0000758.1_g000001 Rmu_sc0000758.1_g000002 Rmu_sc0000870.1_g000019 Rmu_sc0000924.1_g000040 Rmu_sc0000924.1_g000041 Rmu_sc0000999.1_g000037 Rmu_sc0001001.1_g000001 Rmu_sc0001010.1_g000080 Rmu_sc0001075.1_g000041 Rmu_sc0001097.1_g000016 Rmu_sc0001173.1_g000020 Rmu_sc0001258.1_g000010 Rmu_sc0001425.1_g000031 Rmu_sc0001493.1_g000020 Rmu_sc0001493.1_g000021 Rmu_sc0001644.1_g000024 Rmu_sc0001648.1_g000039 Rmu_sc0001662.1_g000002 Rmu_sc0001849.1_g000046 Rmu_sc0001851.1_g000038 Rmu_sc0001861.1_g000006 Rmu_sc0001899.1_g000008 Rmu_sc0002231.1_g000023 Rmu_sc0002393.1_g000012 Rmu_sc0002515.1_g000010 Rmu_sc0002551.1_g000013 Rmu_sc0002680.1_g000029 Rmu_sc0002700.1_g000030 Rmu_sc0002700.1_g000031 Rmu_sc0002709.1_g000035 Rmu_sc0002779.1_g000017 Rmu_sc0003267.1_g000040 Rmu_sc0003306.1_g000009 Rmu_sc0003338.1_g000014 Rmu_sc0003522.1_g000038 Rmu_sc0003522.1_g000039 Rmu_sc0003653.1_g000031 Rmu_sc0003901.1_g000003 Rmu_sc0003920.1_g000009 Rmu_sc0004014.1_g000009 Rmu_sc0004016.1_g000013 Rmu_sc0004031.1_g000002 Rmu_sc0004106.1_g000001 Rmu_sc0004432.1_g000004 Rmu_sc0004481.1_g000020 Rmu_sc0004874.1_g000005 Rmu_sc0004928.1_g000005 Rmu_sc0005065.1_g000053 Rmu_sc0005091.1_g000005 Rmu_sc0005217.1_g000015 Rmu_sc0005242.1_g000002 Rmu_sc0005300.1_g000011 Rmu_sc0005400.1_g000004 Rmu_sc0005486.1_g000007 Rmu_sc0005527.1_g000015 Rmu_sc0006059.1_g000021 Rmu_sc0006087.1_g000004 Rmu_sc0006184.1_g000006 Rmu_sc0006184.1_g000007 Rmu_sc0006578.1_g000006 Rmu_sc0006730.1_g000010 Rmu_sc0006736.1_g000030 Rmu_sc0006736.1_g000033 Rmu_sc0007333.1_g000018 Rmu_sc0007856.1_g000010 Rmu_sc0008231.1_g000003 Rmu_sc0009862.1_g000012 Rmu_sc0010547.1_g000001 Rmu_sc0010547.1_g000003 Rmu_sc0010632.1_g000012 Rmu_sc0010747.1_g000008 Rmu_sc0011075.1_g000009 Rmu_sc0011565.1_g000004 Rmu_sc0011641.1_g000003 Rmu_sc0013102.1_g000013 Rmu_sc0013160.1_g000006 Rmu_sc0014846.1_g000004 Rmu_sc0017037.1_g000003 Rmu_sc0018203.1_g000001 Rmu_sc0018204.1_g000001 Rmu_sc0018348.1_g000001 Rmu_sc0019354.1_g000002 Rmu_sc0021630.1_g000002 Rmu_sc0022987.1_g000002 Rmu_sc0024469.1_g000005 Rmu_sc0033519.1_g000001 Rmu_sc0033519.1_g000002 Rmu_sc0033519.1_g000003 Rmu_sc0042775.1_g000001 Rmu_ssc0000110.1_g000003 Rmu_ssc0000110.1_g000004 Rmu_ssc0000126.1_g000068 Rmu_ssc0000200.1_g000007 Rmu_ssc0000295.1_g000003 Rmu_ssc0000295.1_g000004 Rmu_ssc0000299.1_g000010 Rmu_ssc0000308.1_g000024 Rmu_ssc0000339.1_g000006 Rmu_ssc0000385.1_g000012 Rmu_ssc0000409.1_g000004 Rmu_ssc0000421.1_g000004
rosa_roxburghii Rroxscaffold_156G00440360 Rroxscaffold_166G00440800 Rroxscaffold_1G00039040 Rroxscaffold_1G00039050 Rroxscaffold_1G00073950 Rroxscaffold_2G00091710 Rroxscaffold_2G00120050 Rroxscaffold_2G00122590 Rroxscaffold_3G00219700 Rroxscaffold_3G00264140 Rroxscaffold_4G00290600 Rroxscaffold_4G00323610 Rroxscaffold_4G00328460 Rroxscaffold_5G00343440 Rroxscaffold_5G00343570 Rroxscaffold_5G00378540 Rroxscaffold_5G00385090 Rroxscaffold_7G00169130 Rroxscaffold_7G00216420
rosa_rugosa Rorug01G0065800 Rorug01G0073500 Rorug01G0091700 Rorug01G0096500 Rorug01G0204700.1 Rorug01G0249100 Rorug01G0333800 Rorug01G0333900 Rorug01G0339500 Rorug01G0431300 Rorug02G0085400 Rorug02G0117500 Rorug02G0130900 Rorug02G0178800 Rorug02G0226700 Rorug02G0336300 Rorug02G0338700 Rorug02G0351400 Rorug02G0459900 Rorug03G0187000 Rorug03G0223700 Rorug03G0291300 Rorug03G0291300 Rorug03G0311100 Rorug03G0316900 Rorug03G0346000 Rorug04G0014500 Rorug04G0014600 Rorug04G0124100 Rorug04G0136500 Rorug04G0302000 Rorug04G0338100 Rorug04G0338200 Rorug04G0413100 Rorug05G0182200 Rorug05G0226500 Rorug05G0273300 Rorug05G0292200 Rorug05G0292200 Rorug05G0392500 Rorug05G0394500 Rorug05G0394600 Rorug05G0505600.1 Rorug06G0351400 Rorug06G0393400 Rorug06G0393600 Rorug06G0470000 Rorug07G0063100 Rorug07G0086800 Rorug07G0109200 Rorug07G0236100
rosa_samantha Rh1AG010800 Rh1AG011100 Rh1AG064900 Rh1AG088000 Rh1AG207100 Rh1AG262000 Rh1AG300800 Rh1BG043000 Rh1BG144600 Rh1BG180700 Rh1BG180800 Rh1BG328800 Rh1BG399400 Rh1CG041400 Rh1CG047300 Rh1CG379700 Rh1DG036500 Rh1DG083000 Rh1DG210700 Rh1DG210800 Rh1DG231100 Rh2AG007900 Rh2AG055500 Rh2AG339100 Rh2AG368100 Rh2BG243300 Rh2BG258900 Rh2BG292000 Rh2BG333500 Rh2BG387300 Rh2BG612800 Rh2BG619100 Rh2CG026500 Rh2CG163600 Rh2CG535700 Rh2DG186400 Rh2DG235000 Rh2DG314500 Rh2DG388500 Rh2DG391400 Rh2DG496900 Rh2DG526700 Rh2DG570700 Rh3AG330700 Rh3BG266900 Rh3CG236000 Rh3CG340400 Rh3DG090000 Rh3DG278400 Rh3DG297600 Rh3DG362600 Rh4AG001300 Rh4AG023300 Rh4AG097100 Rh4AG427000 Rh4BG029400 Rh4BG032400 Rh4BG086000 Rh4BG249200 Rh4CG001900 Rh4CG040600 Rh4CG093000 Rh4CG106300 Rh4CG113200 Rh4CG113900 Rh4DG002300 Rh4DG144400 Rh4DG234200 Rh5AG043700 Rh5AG084900 Rh5AG161500 Rh5AG409000 Rh5AG457200 Rh5AG457900 Rh5AG473700 Rh5AG520600 Rh5BG042100 Rh5BG124100 Rh5BG323500 Rh5BG417200 Rh5BG443700 Rh5BG451500 Rh5BG464900 Rh5BG470400 Rh5BG522500 Rh5CG068800 Rh5CG178300 Rh5CG231000 Rh5CG258600 Rh5CG394500 Rh5CG473700 Rh5DG164700 Rh5DG235400 Rh5DG261300 Rh5DG304900 Rh5DG334500 Rh5DG424300 Rh5DG458400 Rh5DG478600 Rh5DG552300 Rh5DG552700 Rh6AG037000 Rh6AG042100 Rh6AG255500 Rh6AG283400 Rh6AG291800 Rh6BG049600 Rh6BG080700 Rh6BG114600 Rh6BG128900 Rh6BG352500 Rh6CG052400 Rh6CG112900 Rh6CG113000 Rh6CG131300 Rh6CG157700 Rh6CG243200 Rh6CG254100 Rh6CG275700 Rh6CG299700 Rh6CG309100 Rh6CG317600 Rh6CG342600 Rh6CG471900 Rh6DG038200 Rh6DG102300 Rh6DG114400 Rh6DG225900 Rh6DG292900 Rh6DG320700 Rh6DG512800 Rh7AG217700 Rh7AG313900 Rh7AG446000 Rh7AG472600 Rh7BG223100 Rh7BG349900 Rh7BG352000 Rh7CG160200 Rh7CG233900 Rh7CG242700 Rh7CG273900 Rh7CG306400 Rh7CG322200 Rh7DG053800 Rh7DG077800 Rh7DG227700 Rh7DG404800
rosa_wichuraiana Rw0G003990 Rw2G022110 Rw2G024890 Rw6G005700 Rw7G008770

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 194
Acc36I ACCTGC 1 cut(s) 194
AccB7I CCANNNNNTGG 1 cut(s) 530
AccI GTMKAC 1 cut(s) 967
AciI CCGC 5 cut(s) 569, 614, 768, 797, 1089
AclWI GGATC 2 cut(s) 949, 1100
AcsI RAATTY 1 cut(s) 1002
AcuI CTGAAG 3 cut(s) 393, 540, 602
AcyI GRCGYC 1 cut(s) 970
AfaI GTAC 3 cut(s) 442, 899, 978
AfeI AGCGCT 1 cut(s) 764
AfiI CCNNNNNNNGG 4 cut(s) 203, 518, 530, 858
AgsI TTSAA 4 cut(s) 119, 181, 261, 476
AjnI CCWGG 4 cut(s) 443, 516, 529, 739
AluBI AGCT 7 cut(s) 129, 215, 350, 727, 1108, 1114, 1164
AluI AGCT 7 cut(s) 129, 215, 350, 727, 1108, 1114, 1164
Alw21I GWGCWC 2 cut(s) 508, 873
Alw26I GTCTC 2 cut(s) 248, 847
AlwI GGATC 2 cut(s) 949, 1100
AlwNI CAGNNNCTG 1 cut(s) 845
Aor51HI AGCGCT 1 cut(s) 764
AoxI GGCC 1 cut(s) 1064
ApeKI GCWGC 3 cut(s) 323, 765, 1161
ApoI RAATTY 1 cut(s) 1002
ArsI GACNNNNNNTTYG 2 cut(s) 918, 950
AspLEI GCGC 1 cut(s) 765
AspS9I GGNCC 4 cut(s) 521, 1055, 1064, 1135
AsuC2I CCSGG 1 cut(s) 1139
AsuHPI GGTGA 5 cut(s) 218, 237, 423, 602, 869
AsuNHI GCTAGC 1 cut(s) 125
AvaII GGWCC 3 cut(s) 521, 1055, 1135
Bbv12I GWGCWC 2 cut(s) 508, 873
BbvCI CCTCAGC 1 cut(s) 723
BbvI GCAGC 2 cut(s) 335, 752
BccI CCATC 3 cut(s) 281, 596, 619
BceAI ACGGC 1 cut(s) 646
BciT130I CCWGG 4 cut(s) 445, 518, 531, 741
BciVI GTATCC 1 cut(s) 859
BclI TGATCA 5 cut(s) 208, 232, 483, 676, 688
BcnI CCSGG 1 cut(s) 1139
BcoDI GTCTC 2 cut(s) 248, 847
BfaI CTAG 5 cut(s) 126, 383, 501, 810, 945
BfmI CTRYAG 1 cut(s) 1149
BfoI RGCGCY 1 cut(s) 766
BfuAI ACCTGC 1 cut(s) 194
BfuI GTATCC 1 cut(s) 859
BisI GCNGC 3 cut(s) 324, 766, 1162
BlsI GCNGC 3 cut(s) 325, 767, 1163
BmcAI AGTACT 1 cut(s) 899
Bme1390I CCNGG 5 cut(s) 445, 518, 531, 741, 1139
Bme18I GGWCC 3 cut(s) 521, 1055, 1135
BmgT120I GGNCC 4 cut(s) 521, 1055, 1064, 1135
BmiI GGNNCC 6 cut(s) 51, 270, 495, 522, 745, 1065
BmrFI CCNGG 5 cut(s) 445, 518, 531, 741, 1139
BmsI GCATC 5 cut(s) 385, 407, 556, 718, 788
BmtI GCTAGC 1 cut(s) 129
BplI GAGNNNNNCTC 1 cut(s) 1148
Bpu10I CCTNAGC 1 cut(s) 723
BpuEI CTTGAG 3 cut(s) 681, 1094, 1100
BpuMI CCSGG 1 cut(s) 1139
BsaHI GRCGYC 1 cut(s) 970
BsaJI CCNNGG 5 cut(s) 42, 444, 517, 633, 669
BsaWI WCCGGW 1 cut(s) 224
BsaXI ACNNNNNCTCC 2 cut(s) 636, 666
Bsc4I CCNNNNNNNGG 4 cut(s) 203, 518, 530, 858
BseBI CCWGG 4 cut(s) 445, 518, 531, 741
BseDI CCNNGG 5 cut(s) 42, 444, 517, 633, 669
BseGI GGATG 5 cut(s) 273, 607, 679, 691, 709
BseLI CCNNNNNNNGG 4 cut(s) 203, 518, 530, 858
BseMII CTCAG 2 cut(s) 737, 773
BseRI GAGGAG 4 cut(s) 380, 476, 479, 1136
BseXI GCAGC 2 cut(s) 335, 752
BsgI GTGCAG 1 cut(s) 122
BshFI GGCC 1 cut(s) 1066
BsiHKAI GWGCWC 2 cut(s) 508, 873
BsiSI CCGG 2 cut(s) 225, 1138
BslFI GGGAC 1 cut(s) 813
BslI CCNNNNNNNGG 4 cut(s) 203, 518, 530, 858
BsmAI GTCTC 2 cut(s) 248, 847
BsmFI GGGAC 1 cut(s) 813
BsmI GAATGC 1 cut(s) 187
BsnI GGCC 1 cut(s) 1066
Bsp1286I GDGCHC 2 cut(s) 508, 873
Bsp143I GATC 7 cut(s) 208, 232, 483, 676, 688, 941, 1092
BspACI CCGC 5 cut(s) 569, 614, 768, 797, 1089
BspANI GGCC 1 cut(s) 1066
BspCNI CTCAG 2 cut(s) 736, 772
BspLI GGNNCC 6 cut(s) 51, 270, 495, 522, 745, 1065
BspMAI CTGCAG 1 cut(s) 1153
BspMI ACCTGC 1 cut(s) 194
BspOI GCTAGC 1 cut(s) 129
BspPI GGATC 2 cut(s) 949, 1100
BssECI CCNNGG 5 cut(s) 42, 444, 517, 633, 669
BssMI GATC 7 cut(s) 208, 232, 483, 676, 688, 941, 1092
BssNI GRCGYC 1 cut(s) 970
BssT1I CCWWGG 1 cut(s) 42
Bst2UI CCWGG 4 cut(s) 445, 518, 531, 741
Bst4CI ACNGT 5 cut(s) 164, 310, 902, 965, 1022
BstACI GRCGYC 1 cut(s) 970
BstAPI GCANNNNNTGC 2 cut(s) 868, 1086
BstC8I GCNNGC 4 cut(s) 29, 127, 1087, 1106
BstDEI CTNAG 2 cut(s) 723, 759
BstDSI CCRYGG 1 cut(s) 633
BstENI CCTNNNNNAGG 1 cut(s) 201
BstF5I GGATG 5 cut(s) 273, 607, 679, 691, 709
BstH2I RGCGCY 1 cut(s) 766
BstHHI GCGC 1 cut(s) 765
BstKTI GATC 7 cut(s) 211, 235, 486, 679, 691, 944, 1095
BstMAI GTCTC 2 cut(s) 248, 847
BstMBI GATC 7 cut(s) 208, 232, 483, 676, 688, 941, 1092
BstMWI GCNNNNNNNGC 3 cut(s) 404, 868, 1086
BstNI CCWGG 4 cut(s) 445, 518, 531, 741
BstNSI RCATGY 1 cut(s) 146
BstSCI CCNGG 5 cut(s) 443, 516, 529, 739, 1137
BstSFI CTRYAG 1 cut(s) 1149
BstV1I GCAGC 2 cut(s) 335, 752
BstX2I RGATCY 1 cut(s) 941
BstYI RGATCY 1 cut(s) 941
BsuI GTATCC 1 cut(s) 859
BsuRI GGCC 1 cut(s) 1066
BtgI CCRYGG 1 cut(s) 633
BtsCI GGATG 5 cut(s) 273, 607, 679, 691, 709
BtsIMutI CAGTG 1 cut(s) 961
BveI ACCTGC 1 cut(s) 194
Cac8I GCNNGC 4 cut(s) 29, 127, 1087, 1106
CaiI CAGNNNCTG 1 cut(s) 845
CfoI GCGC 1 cut(s) 765
Cfr13I GGNCC 4 cut(s) 521, 1055, 1064, 1135
CseI GACGC 2 cut(s) 146, 978
CsiI ACCWGGT 1 cut(s) 739
Csp6I GTAC 3 cut(s) 441, 898, 977
CviAII CATG 4 cut(s) 113, 143, 548, 794
CviQI GTAC 3 cut(s) 441, 898, 977
DdeI CTNAG 2 cut(s) 723, 759
DpnI GATC 7 cut(s) 210, 234, 485, 678, 690, 943, 1094
DpnII GATC 7 cut(s) 208, 232, 483, 676, 688, 941, 1092
Eco130I CCWWGG 1 cut(s) 42
Eco47I GGWCC 3 cut(s) 521, 1055, 1135
Eco47III AGCGCT 1 cut(s) 764
Eco57I CTGAAG 3 cut(s) 393, 540, 602
EcoNI CCTNNNNNAGG 1 cut(s) 201
EcoO109I RGGNCCY 1 cut(s) 1055
EcoRII CCWGG 4 cut(s) 443, 516, 529, 739
EcoT14I CCWWGG 1 cut(s) 42
EcoT22I ATGCAT 1 cut(s) 400
ErhI CCWWGG 1 cut(s) 42
FaeI CATG 4 cut(s) 116, 146, 551, 797
FaqI GGGAC 1 cut(s) 813
FatI CATG 4 cut(s) 112, 142, 547, 793
FauI CCCGC 2 cut(s) 790, 1082
FbaI TGATCA 5 cut(s) 208, 232, 483, 676, 688
FblI GTMKAC 1 cut(s) 967
Fnu4HI GCNGC 3 cut(s) 324, 766, 1162
FokI GGATG 5 cut(s) 260, 614, 678, 686, 696
Fsp4HI GCNGC 3 cut(s) 324, 766, 1162
FspBI CTAG 5 cut(s) 126, 383, 501, 810, 945
GlaI GCGC 1 cut(s) 764
GluI GCNGC 3 cut(s) 324, 766, 1162
HaeII RGCGCY 1 cut(s) 766
HaeIII GGCC 1 cut(s) 1066
HapII CCGG 2 cut(s) 225, 1138
HgaI GACGC 2 cut(s) 146, 978
HhaI GCGC 1 cut(s) 765
Hin1I GRCGYC 1 cut(s) 970
Hin1II CATG 4 cut(s) 116, 146, 551, 797
Hin6I GCGC 1 cut(s) 763
HinP1I GCGC 1 cut(s) 763
HincII GTYRAC 2 cut(s) 733, 968
HindII GTYRAC 2 cut(s) 733, 968
HinfI GANTC 2 cut(s) 428, 629
HpaII CCGG 2 cut(s) 225, 1138
HphI GGTGA 5 cut(s) 218, 237, 423, 602, 869
Hpy166II GTNNAC 4 cut(s) 524, 637, 733, 968
Hpy188I TCNGA 6 cut(s) 403, 412, 488, 559, 621, 996
Hpy188III TCNNGA 5 cut(s) 77, 119, 810, 832, 945
Hpy8I GTNNAC 4 cut(s) 524, 637, 733, 968
Hpy99I CGWCG 2 cut(s) 938, 972
HpyAV CCTTC 4 cut(s) 470, 507, 852, 886
HpyCH4III ACNGT 5 cut(s) 164, 310, 902, 965, 1022
HpyCH4IV ACGT 1 cut(s) 933
HpyCH4V TGCA 8 cut(s) 4, 27, 103, 398, 575, 1008, 1080, 1151
HpyF10VI GCNNNNNNNGC 3 cut(s) 404, 868, 1086
HpyF3I CTNAG 2 cut(s) 723, 759
HpySE526I ACGT 1 cut(s) 933
Hsp92I GRCGYC 1 cut(s) 970
Hsp92II CATG 4 cut(s) 116, 146, 551, 797
HspAI GCGC 1 cut(s) 763
Ksp22I TGATCA 5 cut(s) 208, 232, 483, 676, 688
Kzo9I GATC 7 cut(s) 208, 232, 483, 676, 688, 941, 1092
LmnI GCTCC 6 cut(s) 274, 499, 511, 776, 876, 1123
Lsp1109I GCAGC 2 cut(s) 335, 752
LweI GCATC 5 cut(s) 385, 407, 556, 718, 788
MabI ACCWGGT 1 cut(s) 739
MaeI CTAG 5 cut(s) 126, 383, 501, 810, 945
MaeII ACGT 1 cut(s) 933
MaeIII GTNAC 1 cut(s) 172
MalI GATC 7 cut(s) 210, 234, 485, 678, 690, 943, 1094
MboI GATC 7 cut(s) 208, 232, 483, 676, 688, 941, 1092
MboII GAAGA 1 cut(s) 634
MflI RGATCY 1 cut(s) 941
MhlI GDGCHC 2 cut(s) 508, 873
MluCI AATT 7 cut(s) 22, 261, 373, 561, 716, 1002, 1168
Mph1103I ATGCAT 1 cut(s) 400
MseI TTAA 3 cut(s) 150, 585, 1017
MslI CAYNNNNRTG 1 cut(s) 684
MspI CCGG 2 cut(s) 225, 1138
MspR9I CCNGG 5 cut(s) 445, 518, 531, 741, 1139
Mva1269I GAATGC 1 cut(s) 187
MvaI CCWGG 4 cut(s) 445, 518, 531, 741
MwoI GCNNNNNNNGC 3 cut(s) 404, 868, 1086
NciI CCSGG 1 cut(s) 1139
NdeII GATC 7 cut(s) 208, 232, 483, 676, 688, 941, 1092
NheI GCTAGC 1 cut(s) 125
NlaIII CATG 4 cut(s) 116, 146, 551, 797
NlaIV GGNNCC 6 cut(s) 51, 270, 495, 522, 745, 1065
NmeAIII GCCGAG 1 cut(s) 694
NsiI ATGCAT 1 cut(s) 400
NspI RCATGY 1 cut(s) 146
PaqCI CACCTGC 1 cut(s) 194
PctI GAATGC 1 cut(s) 187
PfeI GAWTC 2 cut(s) 428, 629
PflMI CCANNNNNTGG 1 cut(s) 530
PkrI GCNGC 3 cut(s) 325, 767, 1163
PpuMI RGGWCCY 1 cut(s) 1055
Psp5II RGGWCCY 1 cut(s) 1055
Psp6I CCWGG 4 cut(s) 443, 516, 529, 739
PspGI CCWGG 4 cut(s) 443, 516, 529, 739
PspN4I GGNNCC 6 cut(s) 51, 270, 495, 522, 745, 1065
PspPI GGNCC 4 cut(s) 521, 1055, 1064, 1135
PspPPI RGGWCCY 1 cut(s) 1055
PstI CTGCAG 1 cut(s) 1153
PstNI CAGNNNCTG 1 cut(s) 845
PsuI RGATCY 1 cut(s) 941
RsaI GTAC 3 cut(s) 442, 899, 978
RsaNI GTAC 3 cut(s) 441, 898, 977
RseI CAYNNNNRTG 1 cut(s) 684
SalI GTCGAC 1 cut(s) 966
SaqAI TTAA 3 cut(s) 150, 585, 1017
SatI GCNGC 3 cut(s) 324, 766, 1162
Sau3AI GATC 7 cut(s) 208, 232, 483, 676, 688, 941, 1092
Sau96I GGNCC 4 cut(s) 521, 1055, 1064, 1135
ScaI AGTACT 1 cut(s) 899
ScrFI CCNGG 5 cut(s) 445, 518, 531, 741, 1139
SduI GDGCHC 2 cut(s) 508, 873
SexAI ACCWGGT 1 cut(s) 739
SfaNI GCATC 5 cut(s) 385, 407, 556, 718, 788
SfcI CTRYAG 1 cut(s) 1149
SinI GGWCC 3 cut(s) 521, 1055, 1135
SmiMI CAYNNNNRTG 1 cut(s) 684
SmlI CTYRAG 3 cut(s) 696, 1109, 1115
SmoI CTYRAG 3 cut(s) 696, 1109, 1115
Sse9I AATT 7 cut(s) 22, 261, 373, 561, 716, 1002, 1168
SsiI CCGC 5 cut(s) 569, 614, 768, 797, 1089
SspI AATATT 1 cut(s) 454
SspMI CTAG 5 cut(s) 126, 383, 501, 810, 945
StyD4I CCNGG 5 cut(s) 443, 516, 529, 739, 1137
StyI CCWWGG 1 cut(s) 42
TaaI ACNGT 5 cut(s) 164, 310, 902, 965, 1022
TaiI ACGT 1 cut(s) 936
TaqI TCGA 1 cut(s) 967
TasI AATT 7 cut(s) 22, 261, 373, 561, 716, 1002, 1168
TatI WGTACW 1 cut(s) 897
TfiI GAWTC 2 cut(s) 428, 629
Tru1I TTAA 3 cut(s) 150, 585, 1017
Tru9I TTAA 3 cut(s) 150, 585, 1017
TscAI CASTG 1 cut(s) 968
TseI GCWGC 3 cut(s) 323, 765, 1161
TspDTI ATGAA 2 cut(s) 782, 905
TspGWI ACGGA 2 cut(s) 622, 644
TspRI CASTG 1 cut(s) 968
Van91I CCANNNNNTGG 1 cut(s) 530
VpaK11BI GGWCC 3 cut(s) 521, 1055, 1135
XagI CCTNNNNNAGG 1 cut(s) 201
XapI RAATTY 1 cut(s) 1002
XbaI TCTAGA 2 cut(s) 809, 944
XceI RCATGY 1 cut(s) 146
XmiI GTMKAC 1 cut(s) 967
XspI CTAG 5 cut(s) 126, 383, 501, 810, 945
ZrmI AGTACT 1 cut(s) 899
Zsp2I ATGCAT 1 cut(s) 400
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.