Rroxscaffold_4G00328460

Domain of unknown function (DUF4283)

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000004
Physical Location & Seq
Reverse (-)
61480723 .. 61482158
1436 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_4G00328460.1

Sequence Viewer

Length: 1086 bp
ATGGGTTTGATCTGTCCATGGTCGTTCTTGGCTCCCCAGACGCCCAGGGCTCTTCGCTCCTACGCGTCTGTGGTGGCTAAACCGACAGTCTCCATTGCAAGCCTGCCGCCTCCTGAGATCCACGATGGCAAAATGACTGTCACCATTTCCGAAGAAGGGTATCAGGCCGGTCTGGAGAAGTGTAAGCACATGCTCCTAGCTCGCCTCCATCTGGCCTCCGGGGAGAAGTATTCTCTTCCTGACCTGCGCAAGAAGTTGTCCATTGTTTGGGGTGAGATTGGTAACTGGAGCATCATTCCAATGGGGAAGGGATACTTCACCTTCCGCTTTTCTTCAGATGACGTGCTCTCGATGGTTTGGGAGAAAGGTGCGATTTCCCTAAGACCTGTTGTGGTCGAAGTTGAATATGAACGTCTTCCTGACTATTGCCTCCACTGTCGTAACATTGGTCATAGGCTTTCAGATTGCAAACTTGTCCAGACACCTACAGGTTCGCTTCCACCAGATGTGGCTGATGTGGGTCTTGGACGCTCACGTAAGCCTCGTCGCCGACGGCGGCCCAAATCTAAGCAAAAGCATGTTCCAAAACAATCAGTGAAAGAGATTGGGAAGCAGGTTATAGTTGATAGTACTCCTCCTGTAGTGGAAGACCCTGGAGAGTGTCCTTCCTTCTCTAAGCGGACTTTTTCTCAGGTTCCTTGTCTTCTCCCTACATTGGAGAATAGGAATGGCTCTACGGATGTCACTGTCACTGCGGTTCATGATGTTGTGAGGCCAATTGGTTTCGCTACCGACACTGTGGTAGTGGCTACGACTGAGAACTCGACTGATGCACTACAGATAGTCACTCTTCCTAGTGCTAATGGACACATTGAACAGGTGGGTGATGTTGGCCCTCAATGTGTGGAGGATGCAGCTGGTGGAAATGGAAGGACTTTTTCTACTAGGGGTTCCGAGAGGAATGAGGAGTATGAGCATGATGTTAATCTTACCTCTTTAGTTCGTATACATCCACAGAGTTGGTATGAGGAGGCTGAACGAGAAGAACAGGGAGGCCTATCTCCGCCGTACCAAAGAAGCATCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

361

Amino Acids

39.87

Weight (kDa)

7.13

Isoelectric Point (pI)

52.02

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF4283 PF14111 59 - 128 4.3e-08 Domain of unknown function (DUF4283)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000044)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G07760 AT5G28823
fragaria_vesca FvH4_1g13572 FvH4_2g03281 FvH4_2g04691 FvH4_2g08332 FvH4_2g08333 FvH4_2g15313 FvH4_2g26101 FvH4_2g29541 FvH4_3g06911 FvH4_3g34351 FvH4_3g43733 FvH4_4g02432 FvH4_4g05601 FvH4_4g08213 FvH4_4g09961 FvH4_4g10131 FvH4_4g20001 FvH4_4g20002 FvH4_5g01051 FvH4_5g01401 FvH4_5g27943 FvH4_6g09220 FvH4_6g17383 FvH4_6g35491 FvH4_6g46421 FvH4_7g04151 FvH4_7g13962 FvH4_7g18611 FvH4_7g19491 FvH4_7g19511 FvH4_7g26562
malus_domestica MD06G1221600.v1.1
pyrus_communis pycom10g21150
rosa_chinensis RchiOBHm_Chr1g0337571 RchiOBHm_Chr2g0168771 RchiOBHm_Chr3g0453631 RchiOBHm_Chr6g0278581
rosa_laevigata RLG00000001899 RLG00000001925 RLG00000002026 RLG00000003410 RLG00000003767 RLG00000004304 RLG00000004473 RLG00000004677 RLG00000006856 RLG00000007994 RLG00000009888 RLG00000011627 RLG00000012174 RLG00000012217 RLG00000013118 RLG00000013736 RLG00000014194 RLG00000014251 RLG00000015011 RLG00000015057 RLG00000015235 RLG00000017416 RLG00000018052 RLG00000018537 RLG00000019968 RLG00000020096 RLG00000020263 RLG00000022606 RLG00000023119 RLG00000028111 RLG00000029686 RLG00000030126 RLG00000031124 RLG00000031236 RLG00000032766 RLG00000033171 RLG00000033548 RLG00000033987 RLG00000034062 RLG00000035115 RLG00000035863
rosa_multiflora Rmu_co8036712.1_g000001 Rmu_co8080248.1_g000001 Rmu_co8208334.1_g000001 Rmu_co8253451.1_g000001 Rmu_co8393241.1_g000001 Rmu_co8522225.1_g000005 Rmu_sc0000060.1_g000030 Rmu_sc0000060.1_g000031 Rmu_sc0000060.1_g000032 Rmu_sc0000090.1_g000008 Rmu_sc0000149.1_g000051 Rmu_sc0000149.1_g000058 Rmu_sc0000309.1_g000050 Rmu_sc0000370.1_g000022 Rmu_sc0000370.1_g000023 Rmu_sc0000370.1_g000024 Rmu_sc0000418.1_g000018 Rmu_sc0000427.1_g000014 Rmu_sc0000427.1_g000015 Rmu_sc0000434.1_g000008 Rmu_sc0000487.1_g000038 Rmu_sc0000487.1_g000039 Rmu_sc0000569.1_g000029 Rmu_sc0000580.1_g000097 Rmu_sc0000595.1_g000068 Rmu_sc0000607.1_g000027 Rmu_sc0000738.1_g000004 Rmu_sc0000758.1_g000001 Rmu_sc0000758.1_g000002 Rmu_sc0000870.1_g000019 Rmu_sc0000924.1_g000040 Rmu_sc0000924.1_g000041 Rmu_sc0000999.1_g000037 Rmu_sc0001001.1_g000001 Rmu_sc0001010.1_g000080 Rmu_sc0001075.1_g000041 Rmu_sc0001097.1_g000016 Rmu_sc0001173.1_g000020 Rmu_sc0001258.1_g000010 Rmu_sc0001425.1_g000031 Rmu_sc0001493.1_g000020 Rmu_sc0001493.1_g000021 Rmu_sc0001644.1_g000024 Rmu_sc0001648.1_g000039 Rmu_sc0001662.1_g000002 Rmu_sc0001849.1_g000046 Rmu_sc0001851.1_g000038 Rmu_sc0001861.1_g000006 Rmu_sc0001899.1_g000008 Rmu_sc0002231.1_g000023 Rmu_sc0002393.1_g000012 Rmu_sc0002515.1_g000010 Rmu_sc0002551.1_g000013 Rmu_sc0002680.1_g000029 Rmu_sc0002700.1_g000030 Rmu_sc0002700.1_g000031 Rmu_sc0002709.1_g000035 Rmu_sc0002779.1_g000017 Rmu_sc0003267.1_g000040 Rmu_sc0003306.1_g000009 Rmu_sc0003338.1_g000014 Rmu_sc0003522.1_g000038 Rmu_sc0003522.1_g000039 Rmu_sc0003653.1_g000031 Rmu_sc0003901.1_g000003 Rmu_sc0003920.1_g000009 Rmu_sc0004014.1_g000009 Rmu_sc0004016.1_g000013 Rmu_sc0004031.1_g000002 Rmu_sc0004106.1_g000001 Rmu_sc0004432.1_g000004 Rmu_sc0004481.1_g000020 Rmu_sc0004874.1_g000005 Rmu_sc0004928.1_g000005 Rmu_sc0005065.1_g000053 Rmu_sc0005091.1_g000005 Rmu_sc0005217.1_g000015 Rmu_sc0005242.1_g000002 Rmu_sc0005300.1_g000011 Rmu_sc0005400.1_g000004 Rmu_sc0005486.1_g000007 Rmu_sc0005527.1_g000015 Rmu_sc0006059.1_g000021 Rmu_sc0006087.1_g000004 Rmu_sc0006184.1_g000006 Rmu_sc0006184.1_g000007 Rmu_sc0006578.1_g000006 Rmu_sc0006730.1_g000010 Rmu_sc0006736.1_g000030 Rmu_sc0006736.1_g000033 Rmu_sc0007333.1_g000018 Rmu_sc0007856.1_g000010 Rmu_sc0008231.1_g000003 Rmu_sc0009862.1_g000012 Rmu_sc0010547.1_g000001 Rmu_sc0010547.1_g000003 Rmu_sc0010632.1_g000012 Rmu_sc0010747.1_g000008 Rmu_sc0011075.1_g000009 Rmu_sc0011565.1_g000004 Rmu_sc0011641.1_g000003 Rmu_sc0013102.1_g000013 Rmu_sc0013160.1_g000006 Rmu_sc0014846.1_g000004 Rmu_sc0017037.1_g000003 Rmu_sc0018203.1_g000001 Rmu_sc0018204.1_g000001 Rmu_sc0018348.1_g000001 Rmu_sc0019354.1_g000002 Rmu_sc0021630.1_g000002 Rmu_sc0022987.1_g000002 Rmu_sc0024469.1_g000005 Rmu_sc0033519.1_g000001 Rmu_sc0033519.1_g000002 Rmu_sc0033519.1_g000003 Rmu_sc0042775.1_g000001 Rmu_ssc0000110.1_g000003 Rmu_ssc0000110.1_g000004 Rmu_ssc0000126.1_g000068 Rmu_ssc0000200.1_g000007 Rmu_ssc0000295.1_g000003 Rmu_ssc0000295.1_g000004 Rmu_ssc0000299.1_g000010 Rmu_ssc0000308.1_g000024 Rmu_ssc0000339.1_g000006 Rmu_ssc0000385.1_g000012 Rmu_ssc0000409.1_g000004 Rmu_ssc0000421.1_g000004
rosa_roxburghii Rroxscaffold_156G00440360 Rroxscaffold_166G00440800 Rroxscaffold_1G00039040 Rroxscaffold_1G00039050 Rroxscaffold_1G00073950 Rroxscaffold_2G00091710 Rroxscaffold_2G00120050 Rroxscaffold_2G00122590 Rroxscaffold_3G00219700 Rroxscaffold_3G00264140 Rroxscaffold_4G00290600 Rroxscaffold_4G00323610 Rroxscaffold_4G00328460 Rroxscaffold_5G00343440 Rroxscaffold_5G00343570 Rroxscaffold_5G00378540 Rroxscaffold_5G00385090 Rroxscaffold_7G00169130 Rroxscaffold_7G00216420
rosa_rugosa Rorug01G0065800 Rorug01G0073500 Rorug01G0091700 Rorug01G0096500 Rorug01G0204700.1 Rorug01G0249100 Rorug01G0333800 Rorug01G0333900 Rorug01G0339500 Rorug01G0431300 Rorug02G0085400 Rorug02G0117500 Rorug02G0130900 Rorug02G0178800 Rorug02G0226700 Rorug02G0336300 Rorug02G0338700 Rorug02G0351400 Rorug02G0459900 Rorug03G0187000 Rorug03G0223700 Rorug03G0291300 Rorug03G0291300 Rorug03G0311100 Rorug03G0316900 Rorug03G0346000 Rorug04G0014500 Rorug04G0014600 Rorug04G0124100 Rorug04G0136500 Rorug04G0302000 Rorug04G0338100 Rorug04G0338200 Rorug04G0413100 Rorug05G0182200 Rorug05G0226500 Rorug05G0273300 Rorug05G0292200 Rorug05G0292200 Rorug05G0392500 Rorug05G0394500 Rorug05G0394600 Rorug05G0505600.1 Rorug06G0351400 Rorug06G0393400 Rorug06G0393600 Rorug06G0470000 Rorug07G0063100 Rorug07G0086800 Rorug07G0109200 Rorug07G0236100
rosa_samantha Rh1AG010800 Rh1AG011100 Rh1AG064900 Rh1AG088000 Rh1AG207100 Rh1AG262000 Rh1AG300800 Rh1BG043000 Rh1BG144600 Rh1BG180700 Rh1BG180800 Rh1BG328800 Rh1BG399400 Rh1CG041400 Rh1CG047300 Rh1CG379700 Rh1DG036500 Rh1DG083000 Rh1DG210700 Rh1DG210800 Rh1DG231100 Rh2AG007900 Rh2AG055500 Rh2AG339100 Rh2AG368100 Rh2BG243300 Rh2BG258900 Rh2BG292000 Rh2BG333500 Rh2BG387300 Rh2BG612800 Rh2BG619100 Rh2CG026500 Rh2CG163600 Rh2CG535700 Rh2DG186400 Rh2DG235000 Rh2DG314500 Rh2DG388500 Rh2DG391400 Rh2DG496900 Rh2DG526700 Rh2DG570700 Rh3AG330700 Rh3BG266900 Rh3CG236000 Rh3CG340400 Rh3DG090000 Rh3DG278400 Rh3DG297600 Rh3DG362600 Rh4AG001300 Rh4AG023300 Rh4AG097100 Rh4AG427000 Rh4BG029400 Rh4BG032400 Rh4BG086000 Rh4BG249200 Rh4CG001900 Rh4CG040600 Rh4CG093000 Rh4CG106300 Rh4CG113200 Rh4CG113900 Rh4DG002300 Rh4DG144400 Rh4DG234200 Rh5AG043700 Rh5AG084900 Rh5AG161500 Rh5AG409000 Rh5AG457200 Rh5AG457900 Rh5AG473700 Rh5AG520600 Rh5BG042100 Rh5BG124100 Rh5BG323500 Rh5BG417200 Rh5BG443700 Rh5BG451500 Rh5BG464900 Rh5BG470400 Rh5BG522500 Rh5CG068800 Rh5CG178300 Rh5CG231000 Rh5CG258600 Rh5CG394500 Rh5CG473700 Rh5DG164700 Rh5DG235400 Rh5DG261300 Rh5DG304900 Rh5DG334500 Rh5DG424300 Rh5DG458400 Rh5DG478600 Rh5DG552300 Rh5DG552700 Rh6AG037000 Rh6AG042100 Rh6AG255500 Rh6AG283400 Rh6AG291800 Rh6BG049600 Rh6BG080700 Rh6BG114600 Rh6BG128900 Rh6BG352500 Rh6CG052400 Rh6CG112900 Rh6CG113000 Rh6CG131300 Rh6CG157700 Rh6CG243200 Rh6CG254100 Rh6CG275700 Rh6CG299700 Rh6CG309100 Rh6CG317600 Rh6CG342600 Rh6CG471900 Rh6DG038200 Rh6DG102300 Rh6DG114400 Rh6DG225900 Rh6DG292900 Rh6DG320700 Rh6DG512800 Rh7AG217700 Rh7AG313900 Rh7AG446000 Rh7AG472600 Rh7BG223100 Rh7BG349900 Rh7BG352000 Rh7CG160200 Rh7CG233900 Rh7CG242700 Rh7CG273900 Rh7CG306400 Rh7CG322200 Rh7DG053800 Rh7DG077800 Rh7DG227700 Rh7DG404800
rosa_wichuraiana Rw0G003990 Rw2G022110 Rw2G024890 Rw6G005700 Rw7G008770

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 248
Acc36I ACCTGC 2 cut(s) 252, 604
AccB7I CCANNNNNTGG 1 cut(s) 267
AccI GTMKAC 1 cut(s) 1006
AccII CGCG 1 cut(s) 65
AciI CCGC 6 cut(s) 107, 325, 556, 679, 755, 1064
AclWI GGATC 1 cut(s) 112
AcuI CTGAAG 1 cut(s) 318
AcyI GRCGYC 1 cut(s) 41
AfaI GTAC 2 cut(s) 631, 1070
AfiI CCNNNNNNNGG 4 cut(s) 156, 211, 267, 715
AflIII ACRYGT 1 cut(s) 63
AgsI TTSAA 2 cut(s) 404, 875
AjiI CACGTC 1 cut(s) 343
AjnI CCWGG 2 cut(s) 44, 652
AluBI AGCT 2 cut(s) 200, 917
AluI AGCT 2 cut(s) 200, 917
Alw21I GWGCWC 1 cut(s) 348
Alw26I GTCTC 1 cut(s) 94
AlwI GGATC 1 cut(s) 112
AoxI GGCC 6 cut(s) 165, 213, 557, 773, 892, 1054
ApeKI GCWGC 1 cut(s) 914
ArsI GACNNNNNNTTYG 2 cut(s) 123, 155
Asp700I GAANNNNTTC 1 cut(s) 414
AspLEI GCGC 1 cut(s) 249
AspS9I GGNCC 2 cut(s) 558, 893
AsuC2I CCSGG 1 cut(s) 220
AsuHPI GGTGA 4 cut(s) 133, 284, 310, 896
BanII GRGCYC 1 cut(s) 52
BbsI GAAGAC 3 cut(s) 407, 654, 695
Bbv12I GWGCWC 1 cut(s) 348
BbvI GCAGC 1 cut(s) 926
BccI CCATC 3 cut(s) 119, 216, 346
BceAI ACGGC 2 cut(s) 569, 1051
BciT130I CCWGG 2 cut(s) 46, 654
BciVI GTATCC 1 cut(s) 305
BcnI CCSGG 1 cut(s) 220
BcoDI GTCTC 1 cut(s) 94
BfaI CTAG 3 cut(s) 197, 855, 945
BfmI CTRYAG 3 cut(s) 486, 639, 836
BfuAI ACCTGC 2 cut(s) 252, 604
BfuI GTATCC 1 cut(s) 305
BisI GCNGC 3 cut(s) 107, 557, 915
BlsI GCNGC 3 cut(s) 108, 558, 916
BmcAI AGTACT 1 cut(s) 631
Bme1390I CCNGG 3 cut(s) 46, 220, 654
BmgBI CACGTC 1 cut(s) 343
BmgT120I GGNCC 2 cut(s) 558, 893
BmiI GGNNCC 3 cut(s) 33, 696, 952
BmrFI CCNGG 3 cut(s) 46, 220, 654
BmsI GCATC 3 cut(s) 300, 820, 901
BpiI GAAGAC 3 cut(s) 407, 654, 695
BpmI CTGGAG 3 cut(s) 194, 307, 675
BpuMI CCSGG 1 cut(s) 220
BsaAI YACGTR 1 cut(s) 536
BsaBI GATNNNNATC 1 cut(s) 984
BsaHI GRCGYC 1 cut(s) 41
BsaJI CCNNGG 5 cut(s) 17, 44, 45, 219, 652
Bsc4I CCNNNNNNNGG 4 cut(s) 156, 211, 267, 715
Bse118I RCCGGY 1 cut(s) 167
Bse1I ACTGG 1 cut(s) 290
Bse3DI GCAATG 1 cut(s) 93
Bse8I GATNNNNATC 1 cut(s) 984
BseBI CCWGG 2 cut(s) 46, 654
BseDI CCNNGG 5 cut(s) 17, 44, 45, 219, 652
BseGI GGATG 3 cut(s) 745, 916, 1009
BseJI GATNNNNATC 1 cut(s) 984
BseLI CCNNNNNNNGG 4 cut(s) 156, 211, 267, 715
BseMI GCAATG 1 cut(s) 93
BseMII CTCAG 3 cut(s) 105, 704, 807
BseNI ACTGG 1 cut(s) 290
BseRI GAGGAG 3 cut(s) 624, 980, 1043
BseXI GCAGC 1 cut(s) 926
Bsh1236I CGCG 1 cut(s) 65
BshFI GGCC 6 cut(s) 167, 215, 559, 775, 894, 1056
BsiHKAI GWGCWC 1 cut(s) 348
BsiSI CCGG 2 cut(s) 168, 219
BslI CCNNNNNNNGG 4 cut(s) 156, 211, 267, 715
BsmAI GTCTC 1 cut(s) 94
BsnI GGCC 6 cut(s) 167, 215, 559, 775, 894, 1056
Bsp1286I GDGCHC 2 cut(s) 52, 348
Bsp143I GATC 2 cut(s) 9, 117
Bsp19I CCATGG 1 cut(s) 17
BspACI CCGC 6 cut(s) 107, 325, 556, 679, 755, 1064
BspANI GGCC 6 cut(s) 167, 215, 559, 775, 894, 1056
BspCNI CTCAG 3 cut(s) 106, 703, 808
BspFNI CGCG 1 cut(s) 65
BspHI TCATGA 1 cut(s) 760
BspLI GGNNCC 3 cut(s) 33, 696, 952
BspMI ACCTGC 2 cut(s) 252, 604
BspPI GGATC 1 cut(s) 112
BspQI GCTCTTC 1 cut(s) 57
BsrDI GCAATG 1 cut(s) 93
BsrFI RCCGGY 1 cut(s) 167
BsrI ACTGG 1 cut(s) 290
BssAI RCCGGY 1 cut(s) 167
BssECI CCNNGG 5 cut(s) 17, 44, 45, 219, 652
BssMI GATC 2 cut(s) 9, 117
BssNAI GTATAC 1 cut(s) 1007
BssNI GRCGYC 1 cut(s) 41
BssT1I CCWWGG 1 cut(s) 17
Bst1107I GTATAC 1 cut(s) 1007
Bst2UI CCWGG 2 cut(s) 46, 654
Bst4CI ACNGT 5 cut(s) 88, 139, 437, 748, 799
Bst6I CTCTTC 3 cut(s) 57, 240, 855
BstACI GRCGYC 1 cut(s) 41
BstBAI YACGTR 1 cut(s) 536
BstC8I GCNNGC 3 cut(s) 100, 104, 202
BstDEI CTNAG 6 cut(s) 114, 380, 567, 675, 690, 816
BstDSI CCRYGG 1 cut(s) 17
BstF5I GGATG 3 cut(s) 745, 916, 1009
BstFNI CGCG 1 cut(s) 65
BstHHI GCGC 1 cut(s) 249
BstKTI GATC 2 cut(s) 12, 120
BstMAI GTCTC 1 cut(s) 94
BstMBI GATC 2 cut(s) 9, 117
BstNI CCWGG 2 cut(s) 46, 654
BstNSI RCATGY 2 cut(s) 193, 581
BstSCI CCNGG 3 cut(s) 44, 218, 652
BstSFI CTRYAG 3 cut(s) 486, 639, 836
BstUI CGCG 1 cut(s) 65
BstV1I GCAGC 1 cut(s) 926
BstV2I GAAGAC 3 cut(s) 407, 654, 695
BstX2I RGATCY 1 cut(s) 117
BstXI CCANNNNNNTGG 1 cut(s) 1020
BstYI RGATCY 1 cut(s) 117
BstZ17I GTATAC 1 cut(s) 1007
BsuI GTATCC 1 cut(s) 305
BsuRI GGCC 6 cut(s) 167, 215, 559, 775, 894, 1056
BtgI CCRYGG 1 cut(s) 17
BtrI CACGTC 1 cut(s) 343
BtsCI GGATG 3 cut(s) 745, 916, 1009
BtsI GCAGTG 1 cut(s) 750
BtsIMutI CAGTG 5 cut(s) 433, 600, 744, 750, 795
BveI ACCTGC 2 cut(s) 252, 604
Cac8I GCNNGC 3 cut(s) 100, 104, 202
CciI TCATGA 1 cut(s) 760
CfoI GCGC 1 cut(s) 249
Cfr10I RCCGGY 1 cut(s) 167
Cfr13I GGNCC 2 cut(s) 558, 893
CseI GACGC 3 cut(s) 49, 54, 537
Csp6I GTAC 2 cut(s) 630, 1069
CviAII CATG 5 cut(s) 18, 190, 578, 761, 977
CviQI GTAC 2 cut(s) 630, 1069
DdeI CTNAG 6 cut(s) 114, 380, 567, 675, 690, 816
DpnI GATC 2 cut(s) 11, 119
DpnII GATC 2 cut(s) 9, 117
Eam1104I CTCTTC 3 cut(s) 57, 240, 855
EarI CTCTTC 3 cut(s) 57, 240, 855
EciI GGCGGA 1 cut(s) 1053
Eco130I CCWWGG 1 cut(s) 17
Eco147I AGGCCT 1 cut(s) 1056
Eco24I GRGCYC 1 cut(s) 52
Eco57I CTGAAG 1 cut(s) 318
EcoRII CCWGG 2 cut(s) 44, 652
EcoT14I CCWWGG 1 cut(s) 17
EcoT38I GRGCYC 1 cut(s) 52
ErhI CCWWGG 1 cut(s) 17
FaeI CATG 5 cut(s) 21, 193, 581, 764, 980
FalI AAGNNNNNCTT 2 cut(s) 299, 331
FatI CATG 5 cut(s) 17, 189, 577, 760, 976
FblI GTMKAC 1 cut(s) 1006
Fnu4HI GCNGC 3 cut(s) 107, 557, 915
FokI GGATG 3 cut(s) 752, 923, 996
FriOI GRGCYC 1 cut(s) 52
Fsp4HI GCNGC 3 cut(s) 107, 557, 915
FspBI CTAG 3 cut(s) 197, 855, 945
FspI TGCGCA 1 cut(s) 248
GlaI GCGC 1 cut(s) 248
GluI GCNGC 3 cut(s) 107, 557, 915
GsuI CTGGAG 3 cut(s) 194, 307, 675
HaeIII GGCC 6 cut(s) 167, 215, 559, 775, 894, 1056
HapII CCGG 2 cut(s) 168, 219
HgaI GACGC 3 cut(s) 49, 54, 537
HhaI GCGC 1 cut(s) 249
Hin1I GRCGYC 1 cut(s) 41
Hin1II CATG 5 cut(s) 21, 193, 581, 764, 980
Hin6I GCGC 1 cut(s) 247
HinP1I GCGC 1 cut(s) 247
HpaII CCGG 2 cut(s) 168, 219
HphI GGTGA 4 cut(s) 133, 284, 310, 896
Hpy166II GTNNAC 1 cut(s) 1007
Hpy188I TCNGA 4 cut(s) 151, 337, 463, 955
Hpy188III TCNNGA 7 cut(s) 113, 173, 239, 349, 419, 478, 761
Hpy8I GTNNAC 1 cut(s) 1007
Hpy99I CGWCG 2 cut(s) 549, 555
HpyAV CCTTC 6 cut(s) 149, 301, 331, 675, 679, 924
HpyCH4III ACNGT 5 cut(s) 88, 139, 437, 748, 799
HpyCH4IV ACGT 3 cut(s) 342, 412, 535
HpyCH4V TGCA 4 cut(s) 98, 468, 833, 914
HpyF3I CTNAG 6 cut(s) 114, 380, 567, 675, 690, 816
HpySE526I ACGT 3 cut(s) 342, 412, 535
Hsp92I GRCGYC 1 cut(s) 41
Hsp92II CATG 5 cut(s) 21, 193, 581, 764, 980
HspAI GCGC 1 cut(s) 247
Kzo9I GATC 2 cut(s) 9, 117
LguI GCTCTTC 1 cut(s) 57
LmnI GCTCC 4 cut(s) 37, 62, 198, 288
Lsp1109I GCAGC 1 cut(s) 926
LweI GCATC 3 cut(s) 300, 820, 901
MaeI CTAG 3 cut(s) 197, 855, 945
MaeII ACGT 3 cut(s) 342, 412, 535
MaeIII GTNAC 6 cut(s) 139, 281, 440, 742, 748, 844
MalI GATC 2 cut(s) 11, 119
MboI GATC 2 cut(s) 9, 117
MboII GAAGA 9 cut(s) 44, 164, 227, 324, 407, 659, 695, 842, 1055
MfeI CAATTG 1 cut(s) 777
MflI RGATCY 1 cut(s) 117
MhlI GDGCHC 2 cut(s) 52, 348
MluCI AATT 1 cut(s) 777
MluI ACGCGT 1 cut(s) 63
MroXI GAANNNNTTC 1 cut(s) 414
MseI TTAA 1 cut(s) 984
MslI CAYNNNNRTG 1 cut(s) 299
MspA1I CMGCKG 1 cut(s) 917
MspI CCGG 2 cut(s) 168, 219
MspR9I CCNGG 3 cut(s) 46, 220, 654
MunI CAATTG 1 cut(s) 777
MvaI CCWGG 2 cut(s) 46, 654
MvnI CGCG 1 cut(s) 65
NciI CCSGG 1 cut(s) 220
NcoI CCATGG 1 cut(s) 17
NdeII GATC 2 cut(s) 9, 117
NlaIII CATG 5 cut(s) 21, 193, 581, 764, 980
NlaIV GGNNCC 3 cut(s) 33, 696, 952
NmuCI GTSAC 4 cut(s) 139, 742, 748, 844
NsbI TGCGCA 1 cut(s) 248
NspI RCATGY 2 cut(s) 193, 581
PagI TCATGA 1 cut(s) 760
PasI CCCWGGG 1 cut(s) 45
PceI AGGCCT 1 cut(s) 1056
PciSI GCTCTTC 1 cut(s) 57
PcsI WCGNNNNNNNCGW 1 cut(s) 541
PdmI GAANNNNTTC 1 cut(s) 414
PflMI CCANNNNNTGG 1 cut(s) 267
PkrI GCNGC 3 cut(s) 108, 558, 916
Ppu21I YACGTR 1 cut(s) 536
Psp6I CCWGG 2 cut(s) 44, 652
PspGI CCWGG 2 cut(s) 44, 652
PspN4I GGNNCC 3 cut(s) 33, 696, 952
PspPI GGNCC 2 cut(s) 558, 893
PsuI RGATCY 1 cut(s) 117
PvuII CAGCTG 1 cut(s) 917
RsaI GTAC 2 cut(s) 631, 1070
RsaNI GTAC 2 cut(s) 630, 1069
RseI CAYNNNNRTG 1 cut(s) 299
SapI GCTCTTC 1 cut(s) 57
SaqAI TTAA 1 cut(s) 984
SatI GCNGC 3 cut(s) 107, 557, 915
Sau3AI GATC 2 cut(s) 9, 117
Sau96I GGNCC 2 cut(s) 558, 893
ScaI AGTACT 1 cut(s) 631
ScrFI CCNGG 3 cut(s) 46, 220, 654
SduI GDGCHC 2 cut(s) 52, 348
SfaNI GCATC 3 cut(s) 300, 820, 901
SfcI CTRYAG 3 cut(s) 486, 639, 836
SmiMI CAYNNNNRTG 1 cut(s) 299
Sse9I AATT 1 cut(s) 777
SseBI AGGCCT 1 cut(s) 1056
SsiI CCGC 6 cut(s) 107, 325, 556, 679, 755, 1064
SspMI CTAG 3 cut(s) 197, 855, 945
StuI AGGCCT 1 cut(s) 1056
StyD4I CCNGG 3 cut(s) 44, 218, 652
StyI CCWWGG 1 cut(s) 17
TaaI ACNGT 5 cut(s) 88, 139, 437, 748, 799
TaiI ACGT 3 cut(s) 345, 415, 538
TaqI TCGA 3 cut(s) 350, 396, 824
TasI AATT 1 cut(s) 777
TatI WGTACW 1 cut(s) 629
TauI GCSGC 2 cut(s) 109, 559
Tru1I TTAA 1 cut(s) 984
Tru9I TTAA 1 cut(s) 984
TscAI CASTG 5 cut(s) 440, 600, 751, 757, 802
TseFI GTSAC 4 cut(s) 139, 742, 748, 844
TseI GCWGC 1 cut(s) 914
Tsp45I GTSAC 4 cut(s) 139, 742, 748, 844
TspDTI ATGAA 2 cut(s) 423, 749
TspGWI ACGGA 1 cut(s) 752
TspRI CASTG 5 cut(s) 440, 600, 751, 757, 802
Van91I CCANNNNNTGG 1 cut(s) 267
XceI RCATGY 2 cut(s) 193, 581
XmiI GTMKAC 1 cut(s) 1006
XmnI GAANNNNTTC 1 cut(s) 414
XspI CTAG 3 cut(s) 197, 855, 945
ZrmI AGTACT 1 cut(s) 631
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.