Rmu_sc0014846.1_g000004

Domain of unknown function (DUF4283)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0014846.1
OG0000044
Physical Location & Seq
Reverse (-)
13066 .. 17591
4526 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0014846.1_g000004.1.cds

Sequence Viewer

Length: 1926 bp
atgagctcaatctgcctatggccgttcttggatactgggatgctcggggctcttcgcttctatgcatctgtggttgcgaaactggtagtctccatagcaagtcttctgcctactgagatccatgatgacaaaatgactgtcacaatttctgaagaagggtatcaagccggtctggaaaagtgtaagcacatgctcctggctagcctccatttagcttatggggaaaagtattctcttactgacctgcgcaagaagttgtccattgtttggggtgagattggtaattggagcatcattccaatggggaaggggtacttttccttcaacttttcttcagatgatgtgatttcgatggtttggggaaaaggagtgatcgccctaagacctggtattttacgttttatgagttggacgacaaacttctcgccggccaatcaacataacaccaacgcacatgtgtggattcacttgtgggatctgcaattttggaagccaataacactatttgagatagcaaacggaatcggggttccggtgaaaattgatgagaatactttggaaaggaagtatgggctttatgttagggttctggtggacgtggatttgtcctcggatcttccttgtgattcaacttgggataccccggaaattcgtatttatttttcgagaattttccggaatctaaattgtgtggacgctgcaaggccgagaagaaaccgcgttagggacgaaatcgtcttcttcggaactggaggttccggccacctttgtcgttactcatacgagcttgcaaaaacttaccgggtttgttgtgtggcaacccagtgcaccattcaaacggtgtatgggttaatcctgcaagtcagggaaatcgtggctgaatatgaggggcgtgacacgactgttagtagaaaaaatggggaggtcattgtggtcgaatttgaatatgaacggctccctgactattgtctccattgtggcaacatagatcatagggtctcaacttataaggtagtccagaagcctacatgttctattctaccagagaaggccgatggcggtcgtggacgcttacacaagtctcatcgccgcctccggcataaatctaagcagacgtatgttccaaaacaatcagtgaaagagactgggaagcaggttccttgtcaagttcctacgttggagcctacattggtgaatggctctacggacaccactttcactgtggttcaagaagttgtgaagccaattggtttggctaccgacaccgttgttggtgatggtggccctcgatgtgtgaacgatgctactggtggaaataggagtgatttttctactagtgcttccgagatgaatgaggaatctgatcatgatgttaatattacttctttggttcatatacatccagacagttggtatgaggaggttgaacgtgaaggccctgggctagttttcagagatttcaacgcagtgctaggagctcatgaaaagaaaagaggcgctccgccttgtcaacgatcttgtgctgaatttcaagccatgtcagatatttgtgaacttgtccacattgatactaaaggggctaagtttacctgggtttgttggcatcgagtccaaagtaatgttcagatcagcaaccatccacttcttaggaccttttctaagaccgcaggagctcgccaaagcctttttcgttctgatcttaatgcattggaagttctacaacaagaaatttctttatcggggcgctctgatgatgattttgctaaagagaatgagcttcatgctaatttgaatgaatctataaggttgcaggagttattctggcatgagaagtctaggttaagatggttatcagaagctgatcagaatactttttttttcatgctcaatgtcaagcctggaggatgcgatttacaatttctttga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF4283 zf-CCHC_4

Protein Analysis

641

Amino Acids

72.55

Weight (kDa)

6.5

Isoelectric Point (pI)

38.17

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000044)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G07760 AT5G28823
fragaria_vesca FvH4_1g13572 FvH4_2g03281 FvH4_2g04691 FvH4_2g08332 FvH4_2g08333 FvH4_2g15313 FvH4_2g26101 FvH4_2g29541 FvH4_3g06911 FvH4_3g34351 FvH4_3g43733 FvH4_4g02432 FvH4_4g05601 FvH4_4g08213 FvH4_4g09961 FvH4_4g10131 FvH4_4g20001 FvH4_4g20002 FvH4_5g01051 FvH4_5g01401 FvH4_5g27943 FvH4_6g09220 FvH4_6g17383 FvH4_6g35491 FvH4_6g46421 FvH4_7g04151 FvH4_7g13962 FvH4_7g18611 FvH4_7g19491 FvH4_7g19511 FvH4_7g26562
malus_domestica MD06G1221600.v1.1
pyrus_communis pycom10g21150
rosa_chinensis RchiOBHm_Chr1g0337571 RchiOBHm_Chr2g0168771 RchiOBHm_Chr3g0453631 RchiOBHm_Chr6g0278581
rosa_laevigata RLG00000001899 RLG00000001925 RLG00000002026 RLG00000003410 RLG00000003767 RLG00000004304 RLG00000004473 RLG00000004677 RLG00000006856 RLG00000007994 RLG00000009888 RLG00000011627 RLG00000012174 RLG00000012217 RLG00000013118 RLG00000013736 RLG00000014194 RLG00000014251 RLG00000015011 RLG00000015057 RLG00000015235 RLG00000017416 RLG00000018052 RLG00000018537 RLG00000019968 RLG00000020096 RLG00000020263 RLG00000022606 RLG00000023119 RLG00000028111 RLG00000029686 RLG00000030126 RLG00000031124 RLG00000031236 RLG00000032766 RLG00000033171 RLG00000033548 RLG00000033987 RLG00000034062 RLG00000035115 RLG00000035863
rosa_multiflora Rmu_co8036712.1_g000001 Rmu_co8080248.1_g000001 Rmu_co8208334.1_g000001 Rmu_co8253451.1_g000001 Rmu_co8393241.1_g000001 Rmu_co8522225.1_g000005 Rmu_sc0000060.1_g000030 Rmu_sc0000060.1_g000031 Rmu_sc0000060.1_g000032 Rmu_sc0000090.1_g000008 Rmu_sc0000149.1_g000051 Rmu_sc0000149.1_g000058 Rmu_sc0000309.1_g000050 Rmu_sc0000370.1_g000022 Rmu_sc0000370.1_g000023 Rmu_sc0000370.1_g000024 Rmu_sc0000418.1_g000018 Rmu_sc0000427.1_g000014 Rmu_sc0000427.1_g000015 Rmu_sc0000434.1_g000008 Rmu_sc0000487.1_g000038 Rmu_sc0000487.1_g000039 Rmu_sc0000569.1_g000029 Rmu_sc0000580.1_g000097 Rmu_sc0000595.1_g000068 Rmu_sc0000607.1_g000027 Rmu_sc0000738.1_g000004 Rmu_sc0000758.1_g000001 Rmu_sc0000758.1_g000002 Rmu_sc0000870.1_g000019 Rmu_sc0000924.1_g000040 Rmu_sc0000924.1_g000041 Rmu_sc0000999.1_g000037 Rmu_sc0001001.1_g000001 Rmu_sc0001010.1_g000080 Rmu_sc0001075.1_g000041 Rmu_sc0001097.1_g000016 Rmu_sc0001173.1_g000020 Rmu_sc0001258.1_g000010 Rmu_sc0001425.1_g000031 Rmu_sc0001493.1_g000020 Rmu_sc0001493.1_g000021 Rmu_sc0001644.1_g000024 Rmu_sc0001648.1_g000039 Rmu_sc0001662.1_g000002 Rmu_sc0001849.1_g000046 Rmu_sc0001851.1_g000038 Rmu_sc0001861.1_g000006 Rmu_sc0001899.1_g000008 Rmu_sc0002231.1_g000023 Rmu_sc0002393.1_g000012 Rmu_sc0002515.1_g000010 Rmu_sc0002551.1_g000013 Rmu_sc0002680.1_g000029 Rmu_sc0002700.1_g000030 Rmu_sc0002700.1_g000031 Rmu_sc0002709.1_g000035 Rmu_sc0002779.1_g000017 Rmu_sc0003267.1_g000040 Rmu_sc0003306.1_g000009 Rmu_sc0003338.1_g000014 Rmu_sc0003522.1_g000038 Rmu_sc0003522.1_g000039 Rmu_sc0003653.1_g000031 Rmu_sc0003901.1_g000003 Rmu_sc0003920.1_g000009 Rmu_sc0004014.1_g000009 Rmu_sc0004016.1_g000013 Rmu_sc0004031.1_g000002 Rmu_sc0004106.1_g000001 Rmu_sc0004432.1_g000004 Rmu_sc0004481.1_g000020 Rmu_sc0004874.1_g000005 Rmu_sc0004928.1_g000005 Rmu_sc0005065.1_g000053 Rmu_sc0005091.1_g000005 Rmu_sc0005217.1_g000015 Rmu_sc0005242.1_g000002 Rmu_sc0005300.1_g000011 Rmu_sc0005400.1_g000004 Rmu_sc0005486.1_g000007 Rmu_sc0005527.1_g000015 Rmu_sc0006059.1_g000021 Rmu_sc0006087.1_g000004 Rmu_sc0006184.1_g000006 Rmu_sc0006184.1_g000007 Rmu_sc0006578.1_g000006 Rmu_sc0006730.1_g000010 Rmu_sc0006736.1_g000030 Rmu_sc0006736.1_g000033 Rmu_sc0007333.1_g000018 Rmu_sc0007856.1_g000010 Rmu_sc0008231.1_g000003 Rmu_sc0009862.1_g000012 Rmu_sc0010547.1_g000001 Rmu_sc0010547.1_g000003 Rmu_sc0010632.1_g000012 Rmu_sc0010747.1_g000008 Rmu_sc0011075.1_g000009 Rmu_sc0011565.1_g000004 Rmu_sc0011641.1_g000003 Rmu_sc0013102.1_g000013 Rmu_sc0013160.1_g000006 Rmu_sc0014846.1_g000004 Rmu_sc0017037.1_g000003 Rmu_sc0018203.1_g000001 Rmu_sc0018204.1_g000001 Rmu_sc0018348.1_g000001 Rmu_sc0019354.1_g000002 Rmu_sc0021630.1_g000002 Rmu_sc0022987.1_g000002 Rmu_sc0024469.1_g000005 Rmu_sc0033519.1_g000001 Rmu_sc0033519.1_g000002 Rmu_sc0033519.1_g000003 Rmu_sc0042775.1_g000001 Rmu_ssc0000110.1_g000003 Rmu_ssc0000110.1_g000004 Rmu_ssc0000126.1_g000068 Rmu_ssc0000200.1_g000007 Rmu_ssc0000295.1_g000003 Rmu_ssc0000295.1_g000004 Rmu_ssc0000299.1_g000010 Rmu_ssc0000308.1_g000024 Rmu_ssc0000339.1_g000006 Rmu_ssc0000385.1_g000012 Rmu_ssc0000409.1_g000004 Rmu_ssc0000421.1_g000004
rosa_roxburghii Rroxscaffold_156G00440360 Rroxscaffold_166G00440800 Rroxscaffold_1G00039040 Rroxscaffold_1G00039050 Rroxscaffold_1G00073950 Rroxscaffold_2G00091710 Rroxscaffold_2G00120050 Rroxscaffold_2G00122590 Rroxscaffold_3G00219700 Rroxscaffold_3G00264140 Rroxscaffold_4G00290600 Rroxscaffold_4G00323610 Rroxscaffold_4G00328460 Rroxscaffold_5G00343440 Rroxscaffold_5G00343570 Rroxscaffold_5G00378540 Rroxscaffold_5G00385090 Rroxscaffold_7G00169130 Rroxscaffold_7G00216420
rosa_rugosa Rorug01G0065800 Rorug01G0073500 Rorug01G0091700 Rorug01G0096500 Rorug01G0204700.1 Rorug01G0249100 Rorug01G0333800 Rorug01G0333900 Rorug01G0339500 Rorug01G0431300 Rorug02G0085400 Rorug02G0117500 Rorug02G0130900 Rorug02G0178800 Rorug02G0226700 Rorug02G0336300 Rorug02G0338700 Rorug02G0351400 Rorug02G0459900 Rorug03G0187000 Rorug03G0223700 Rorug03G0291300 Rorug03G0291300 Rorug03G0311100 Rorug03G0316900 Rorug03G0346000 Rorug04G0014500 Rorug04G0014600 Rorug04G0124100 Rorug04G0136500 Rorug04G0302000 Rorug04G0338100 Rorug04G0338200 Rorug04G0413100 Rorug05G0182200 Rorug05G0226500 Rorug05G0273300 Rorug05G0292200 Rorug05G0292200 Rorug05G0392500 Rorug05G0394500 Rorug05G0394600 Rorug05G0505600.1 Rorug06G0351400 Rorug06G0393400 Rorug06G0393600 Rorug06G0470000 Rorug07G0063100 Rorug07G0086800 Rorug07G0109200 Rorug07G0236100
rosa_samantha Rh1AG010800 Rh1AG011100 Rh1AG064900 Rh1AG088000 Rh1AG207100 Rh1AG262000 Rh1AG300800 Rh1BG043000 Rh1BG144600 Rh1BG180700 Rh1BG180800 Rh1BG328800 Rh1BG399400 Rh1CG041400 Rh1CG047300 Rh1CG379700 Rh1DG036500 Rh1DG083000 Rh1DG210700 Rh1DG210800 Rh1DG231100 Rh2AG007900 Rh2AG055500 Rh2AG339100 Rh2AG368100 Rh2BG243300 Rh2BG258900 Rh2BG292000 Rh2BG333500 Rh2BG387300 Rh2BG612800 Rh2BG619100 Rh2CG026500 Rh2CG163600 Rh2CG535700 Rh2DG186400 Rh2DG235000 Rh2DG314500 Rh2DG388500 Rh2DG391400 Rh2DG496900 Rh2DG526700 Rh2DG570700 Rh3AG330700 Rh3BG266900 Rh3CG236000 Rh3CG340400 Rh3DG090000 Rh3DG278400 Rh3DG297600 Rh3DG362600 Rh4AG001300 Rh4AG023300 Rh4AG097100 Rh4AG427000 Rh4BG029400 Rh4BG032400 Rh4BG086000 Rh4BG249200 Rh4CG001900 Rh4CG040600 Rh4CG093000 Rh4CG106300 Rh4CG113200 Rh4CG113900 Rh4DG002300 Rh4DG144400 Rh4DG234200 Rh5AG043700 Rh5AG084900 Rh5AG161500 Rh5AG409000 Rh5AG457200 Rh5AG457900 Rh5AG473700 Rh5AG520600 Rh5BG042100 Rh5BG124100 Rh5BG323500 Rh5BG417200 Rh5BG443700 Rh5BG451500 Rh5BG464900 Rh5BG470400 Rh5BG522500 Rh5CG068800 Rh5CG178300 Rh5CG231000 Rh5CG258600 Rh5CG394500 Rh5CG473700 Rh5DG164700 Rh5DG235400 Rh5DG261300 Rh5DG304900 Rh5DG334500 Rh5DG424300 Rh5DG458400 Rh5DG478600 Rh5DG552300 Rh5DG552700 Rh6AG037000 Rh6AG042100 Rh6AG255500 Rh6AG283400 Rh6AG291800 Rh6BG049600 Rh6BG080700 Rh6BG114600 Rh6BG128900 Rh6BG352500 Rh6CG052400 Rh6CG112900 Rh6CG113000 Rh6CG131300 Rh6CG157700 Rh6CG243200 Rh6CG254100 Rh6CG275700 Rh6CG299700 Rh6CG309100 Rh6CG317600 Rh6CG342600 Rh6CG471900 Rh6DG038200 Rh6DG102300 Rh6DG114400 Rh6DG225900 Rh6DG292900 Rh6DG320700 Rh6DG512800 Rh7AG217700 Rh7AG313900 Rh7AG446000 Rh7AG472600 Rh7BG223100 Rh7BG349900 Rh7BG352000 Rh7CG160200 Rh7CG233900 Rh7CG242700 Rh7CG273900 Rh7CG306400 Rh7CG322200 Rh7DG053800 Rh7DG077800 Rh7DG227700 Rh7DG404800
rosa_wichuraiana Rw0G003990 Rw2G022110 Rw2G024890 Rw6G005700 Rw7G008770

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1008
AasI GACNNNNNNGTC 1 cut(s) 734
Acc16I TGCGCA 1 cut(s) 248
Acc36I ACCTGC 2 cut(s) 252, 1144
AccB7I CCANNNNNTGG 1 cut(s) 267
AccII CGCG 1 cut(s) 720
AccIII TCCGGA 1 cut(s) 675
AciI CCGC 5 cut(s) 718, 1059, 1090, 1502, 1665
AclWI GGATC 3 cut(s) 112, 483, 621
AcoI YGGCCR 3 cut(s) 20, 429, 760
AcsI RAATTY 5 cut(s) 648, 669, 938, 1526, 1728
AcuI CTGAAG 2 cut(s) 171, 318
AfaI GTAC 1 cut(s) 314
AfiI CCNNNNNNNGG 2 cut(s) 267, 724
AflIII ACRYGT 2 cut(s) 454, 1028
AgsI TTSAA 9 cut(s) 325, 630, 836, 944, 1229, 1427, 1462, 1532, 1792
AhlI ACTAGT 1 cut(s) 1334
AjiI CACGTC 1 cut(s) 598
AjnI CCWGG 5 cut(s) 195, 385, 1438, 1589, 1897
AjuI GAANNNNNNNTTGG 4 cut(s) 1605, 1637, 1671, 1703
AleI CACNNNNGTG 1 cut(s) 457
AloI GAACNNNNNNTCC 2 cut(s) 513, 545
AluBI AGCT 7 cut(s) 6, 215, 787, 1478, 1673, 1777, 1859
AluI AGCT 7 cut(s) 6, 215, 787, 1478, 1673, 1777, 1859
Alw21I GWGCWC 4 cut(s) 8, 830, 1480, 1675
Alw26I GTCTC 5 cut(s) 94, 974, 1003, 1086, 1136
Alw44I GTGCAC 1 cut(s) 826
AlwI GGATC 3 cut(s) 112, 483, 621
AlwNI CAGNNNCTG 1 cut(s) 1859
Ama87I CYCGRG 1 cut(s) 44
Aor13HI TCCGGA 1 cut(s) 675
AoxI GGCC 7 cut(s) 20, 429, 704, 760, 1050, 1282, 1435
ApaLI GTGCAC 1 cut(s) 826
ApeKI GCWGC 1 cut(s) 698
ApoI RAATTY 5 cut(s) 648, 669, 938, 1526, 1728
ArsI GACNNNNNNTTYG 2 cut(s) 123, 155
AspLEI GCGC 3 cut(s) 249, 1499, 1746
AspS9I GGNCC 3 cut(s) 1283, 1436, 1650
AsuC2I CCSGG 2 cut(s) 644, 803
AsuHPI GGTGA 4 cut(s) 284, 547, 1204, 1286
AsuNHI GCTAGC 1 cut(s) 200
AvaI CYCGRG 1 cut(s) 44
AvaII GGWCC 1 cut(s) 1650
BaeGI GKGCMC 1 cut(s) 830
BanII GRGCYC 4 cut(s) 8, 52, 1480, 1675
BarI GAAGNNNNNNTAC 2 cut(s) 305, 337
BbsI GAAGAC 2 cut(s) 95, 730
Bbv12I GWGCWC 4 cut(s) 8, 830, 1480, 1675
BbvI GCAGC 1 cut(s) 685
BccI CCATC 5 cut(s) 346, 1049, 1271, 1644, 1839
BceAI ACGGC 2 cut(s) 7, 968
BciT130I CCWGG 5 cut(s) 197, 387, 1440, 1591, 1899
BciVI GTATCC 2 cut(s) 25, 631
BclI TGATCA 2 cut(s) 1363, 1861
BcnI CCSGG 2 cut(s) 644, 803
BcoDI GTCTC 5 cut(s) 94, 974, 1003, 1086, 1136
BcuI ACTAGT 1 cut(s) 1334
BfaI CTAG 5 cut(s) 201, 1335, 1445, 1472, 1836
BfoI RGCGCY 2 cut(s) 1500, 1747
BfuAI ACCTGC 2 cut(s) 252, 1144
BfuI GTATCC 2 cut(s) 25, 631
BisI GCNGC 2 cut(s) 699, 1090
BlsI GCNGC 2 cut(s) 700, 1091
Bme1390I CCNGG 7 cut(s) 197, 387, 644, 803, 1440, 1591, 1899
Bme18I GGWCC 1 cut(s) 1650
BmeT110I CYCGRG 1 cut(s) 44
BmgBI CACGTC 1 cut(s) 598
BmgT120I GGNCC 3 cut(s) 1283, 1436, 1650
BmiI GGNNCC 5 cut(s) 531, 757, 956, 1158, 1182
BmrFI CCNGG 7 cut(s) 197, 387, 644, 803, 1440, 1591, 1899
BmrI ACTGGG 3 cut(s) 45, 817, 1155
BmsI GCATC 6 cut(s) 30, 74, 300, 1291, 1612, 1895
BmtI GCTAGC 1 cut(s) 204
BmuI ACTGGG 3 cut(s) 45, 817, 1155
BoxI GACNNNNGTC 1 cut(s) 966
BpiI GAAGAC 2 cut(s) 95, 730
BpmI CTGGAG 2 cut(s) 771, 1920
BpuMI CCSGG 2 cut(s) 644, 803
BsaBI GATNNNNATC 1 cut(s) 1849
BsaI GGTCTC 1 cut(s) 1003
BsaJI CCNNGG 5 cut(s) 609, 642, 1438, 1439, 1590
BsaWI WCCGGW 2 cut(s) 532, 675
Bsc4I CCNNNNNNNGG 2 cut(s) 267, 724
Bse118I RCCGGY 2 cut(s) 167, 427
Bse1I ACTGG 6 cut(s) 40, 87, 754, 823, 1150, 1312
Bse8I GATNNNNATC 1 cut(s) 1849
BseAI TCCGGA 1 cut(s) 675
BseBI CCWGG 5 cut(s) 197, 387, 1440, 1591, 1899
BseDI CCNNGG 5 cut(s) 609, 642, 1438, 1439, 1590
BseGI GGATG 4 cut(s) 45, 1399, 1636, 1910
BseJI GATNNNNATC 1 cut(s) 1849
BseLI CCNNNNNNNGG 2 cut(s) 267, 724
BseMII CTCAG 1 cut(s) 105
BseNI ACTGG 6 cut(s) 40, 87, 754, 823, 1150, 1312
BseRI GAGGAG 1 cut(s) 1433
BseSI GKGCMC 1 cut(s) 830
BseXI GCAGC 1 cut(s) 685
Bsh1236I CGCG 1 cut(s) 720
Bsh1285I CGRYCG 1 cut(s) 1063
BshFI GGCC 7 cut(s) 22, 431, 706, 762, 1052, 1284, 1437
BsiEI CGRYCG 1 cut(s) 1063
BsiHKAI GWGCWC 4 cut(s) 8, 830, 1480, 1675
BsiHKCI CYCGRG 1 cut(s) 44
BsiSI CCGG 8 cut(s) 168, 428, 533, 644, 676, 759, 802, 1096
BslFI GGGAC 1 cut(s) 740
BslI CCNNNNNNNGG 2 cut(s) 267, 724
BsmAI GTCTC 5 cut(s) 94, 974, 1003, 1086, 1136
BsmFI GGGAC 1 cut(s) 740
BsnI GGCC 7 cut(s) 22, 431, 706, 762, 1052, 1284, 1437
Bso31I GGTCTC 1 cut(s) 1003
BsoBI CYCGRG 1 cut(s) 44
Bsp1286I GDGCHC 5 cut(s) 8, 52, 830, 1480, 1675
Bsp13I TCCGGA 1 cut(s) 675
BspACI CCGC 5 cut(s) 718, 1059, 1090, 1502, 1665
BspANI GGCC 7 cut(s) 22, 431, 706, 762, 1052, 1284, 1437
BspCNI CTCAG 1 cut(s) 106
BspEI TCCGGA 1 cut(s) 675
BspFNI CGCG 1 cut(s) 720
BspHI TCATGA 2 cut(s) 1366, 1480
BspLI GGNNCC 5 cut(s) 531, 757, 956, 1158, 1182
BspMI ACCTGC 2 cut(s) 252, 1144
BspOI GCTAGC 1 cut(s) 204
BspPI GGATC 3 cut(s) 112, 483, 621
BspQI GCTCTTC 1 cut(s) 57
BspTNI GGTCTC 1 cut(s) 1003
BsrFI RCCGGY 2 cut(s) 167, 427
BsrI ACTGG 6 cut(s) 40, 87, 754, 823, 1150, 1312
BssAI RCCGGY 2 cut(s) 167, 427
BssECI CCNNGG 5 cut(s) 609, 642, 1438, 1439, 1590
Bst2UI CCWGG 5 cut(s) 197, 387, 1440, 1591, 1899
Bst4CI ACNGT 6 cut(s) 139, 841, 904, 1222, 1267, 1409
Bst6I CTCTTC 1 cut(s) 57
BstC8I GCNNGC 4 cut(s) 202, 429, 789, 1675
BstDEI CTNAG 6 cut(s) 114, 380, 1107, 1581, 1646, 1659
BstF5I GGATG 4 cut(s) 45, 1399, 1636, 1910
BstFNI CGCG 1 cut(s) 720
BstH2I RGCGCY 2 cut(s) 1500, 1747
BstHHI GCGC 3 cut(s) 249, 1499, 1746
BstMAI GTCTC 5 cut(s) 94, 974, 1003, 1086, 1136
BstMCI CGRYCG 1 cut(s) 1063
BstMWI GCNNNNNNNGC 1 cut(s) 12
BstNI CCWGG 5 cut(s) 197, 387, 1440, 1591, 1899
BstNSI RCATGY 3 cut(s) 193, 458, 1032
BstPAI GACNNNNGTC 1 cut(s) 966
BstSCI CCNGG 7 cut(s) 195, 385, 642, 801, 1438, 1589, 1897
BstSLI GKGCMC 1 cut(s) 830
BstUI CGCG 1 cut(s) 720
BstV1I GCAGC 1 cut(s) 685
BstV2I GAAGAC 2 cut(s) 95, 730
BstX2I RGATCY 3 cut(s) 117, 475, 613
BstXI CCANNNNNNTGG 1 cut(s) 1410
BstYI RGATCY 3 cut(s) 117, 475, 613
BsuI GTATCC 2 cut(s) 25, 631
BsuRI GGCC 7 cut(s) 22, 431, 706, 762, 1052, 1284, 1437
BtgZI GCGATG 1 cut(s) 1070
BtrI CACGTC 1 cut(s) 598
BtsCI GGATG 4 cut(s) 45, 1399, 1636, 1910
BtsI GCAGTG 1 cut(s) 1473
BtsIMutI CAGTG 4 cut(s) 830, 1140, 1218, 1473
BveI ACCTGC 2 cut(s) 252, 1144
Cac8I GCNNGC 4 cut(s) 202, 429, 789, 1675
CaiI CAGNNNCTG 1 cut(s) 1859
CciI TCATGA 2 cut(s) 1366, 1480
CfoI GCGC 3 cut(s) 249, 1499, 1746
Cfr10I RCCGGY 2 cut(s) 167, 427
Cfr13I GGNCC 3 cut(s) 1283, 1436, 1650
CseI GACGC 2 cut(s) 704, 1077
CsiI ACCWGGT 1 cut(s) 385
Csp6I GTAC 1 cut(s) 313
CviQI GTAC 1 cut(s) 313
DdeI CTNAG 6 cut(s) 114, 380, 1107, 1581, 1646, 1659
DrdI GACNNNNNNGTC 1 cut(s) 734
DseDI GACNNNNNNGTC 1 cut(s) 734
EaeI YGGCCR 3 cut(s) 20, 429, 760
Eam1104I CTCTTC 1 cut(s) 57
EarI CTCTTC 1 cut(s) 57
EciI GGCGGA 1 cut(s) 1491
Ecl136II GAGCTC 3 cut(s) 6, 1478, 1673
Eco24I GRGCYC 4 cut(s) 8, 52, 1480, 1675
Eco31I GGTCTC 1 cut(s) 1003
Eco47I GGWCC 1 cut(s) 1650
Eco53kI GAGCTC 3 cut(s) 6, 1478, 1673
Eco57I CTGAAG 2 cut(s) 171, 318
Eco88I CYCGRG 1 cut(s) 44
EcoICRI GAGCTC 3 cut(s) 6, 1478, 1673
EcoO109I RGGNCCY 2 cut(s) 1436, 1650
EcoRII CCWGG 5 cut(s) 195, 385, 1438, 1589, 1897
EcoT22I ATGCAT 2 cut(s) 67, 1708
EcoT38I GRGCYC 4 cut(s) 8, 52, 1480, 1675
FalI AAGNNNNNCTT 2 cut(s) 299, 331
FaqI GGGAC 1 cut(s) 740
FbaI TGATCA 2 cut(s) 1363, 1861
Fnu4HI GCNGC 2 cut(s) 699, 1090
FokI GGATG 4 cut(s) 52, 1386, 1623, 1917
FriOI GRGCYC 4 cut(s) 8, 52, 1480, 1675
Fsp4HI GCNGC 2 cut(s) 699, 1090
FspBI CTAG 5 cut(s) 201, 1335, 1445, 1472, 1836
FspI TGCGCA 1 cut(s) 248
GlaI GCGC 3 cut(s) 248, 1498, 1745
GluI GCNGC 2 cut(s) 699, 1090
GsuI CTGGAG 2 cut(s) 771, 1920
HaeII RGCGCY 2 cut(s) 1500, 1747
HaeIII GGCC 7 cut(s) 22, 431, 706, 762, 1052, 1284, 1437
HapII CCGG 8 cut(s) 168, 428, 533, 644, 676, 759, 802, 1096
HgaI GACGC 2 cut(s) 704, 1077
HhaI GCGC 3 cut(s) 249, 1499, 1746
Hin6I GCGC 3 cut(s) 247, 1497, 1744
HinP1I GCGC 3 cut(s) 247, 1497, 1744
HincII GTYRAC 1 cut(s) 1511
HindII GTYRAC 1 cut(s) 1511
HinfI GANTC 7 cut(s) 463, 522, 626, 679, 1358, 1608, 1796
HpaII CCGG 8 cut(s) 168, 428, 533, 644, 676, 759, 802, 1096
HphI GGTGA 4 cut(s) 284, 547, 1204, 1286
Hpy166II GTNNAC 9 cut(s) 595, 694, 828, 1067, 1297, 1511, 1553, 1561, 1587
Hpy188III TCNNGA 8 cut(s) 173, 666, 676, 1018, 1229, 1367, 1403, 1481
Hpy8I GTNNAC 9 cut(s) 595, 694, 828, 1067, 1297, 1511, 1553, 1561, 1587
HpyAV CCTTC 5 cut(s) 149, 301, 331, 1042, 1427
HpyCH4III ACNGT 6 cut(s) 139, 841, 904, 1222, 1267, 1409
HpyCH4IV ACGT 5 cut(s) 397, 597, 1115, 1175, 1429
HpyCH4V TGCA 8 cut(s) 65, 481, 701, 791, 828, 859, 1706, 1810
HpyF10VI GCNNNNNNNGC 1 cut(s) 12
HpyF3I CTNAG 6 cut(s) 114, 380, 1107, 1581, 1646, 1659
HpySE526I ACGT 5 cut(s) 397, 597, 1115, 1175, 1429
HspAI GCGC 3 cut(s) 247, 1497, 1744
Kpn2I TCCGGA 1 cut(s) 675
KroI GCCGGC 1 cut(s) 427
KroNI GCCGGC 1 cut(s) 429
Ksp22I TGATCA 2 cut(s) 1363, 1861
LguI GCTCTTC 1 cut(s) 57
LmnI GCTCC 7 cut(s) 198, 288, 960, 1180, 1475, 1504, 1670
Lsp1109I GCAGC 1 cut(s) 685
LweI GCATC 6 cut(s) 30, 74, 300, 1291, 1612, 1895
MabI ACCWGGT 1 cut(s) 385
MaeI CTAG 5 cut(s) 201, 1335, 1445, 1472, 1836
MaeII ACGT 5 cut(s) 397, 597, 1115, 1175, 1429
MaeIII GTNAC 3 cut(s) 139, 773, 893
MboII GAAGA 8 cut(s) 44, 95, 164, 324, 608, 723, 730, 733
MfeI CAATTG 1 cut(s) 1245
MflI RGATCY 3 cut(s) 117, 475, 613
MhlI GDGCHC 5 cut(s) 8, 52, 830, 1480, 1675
MlyI GAGTC 1 cut(s) 1617
MmeI TCCRAC 2 cut(s) 389, 1158
Mph1103I ATGCAT 2 cut(s) 67, 1708
MroI TCCGGA 1 cut(s) 675
MroNI GCCGGC 1 cut(s) 427
MseI TTAA 4 cut(s) 851, 1374, 1701, 1841
MslI CAYNNNNRTG 2 cut(s) 299, 457
MspI CCGG 8 cut(s) 168, 428, 533, 644, 676, 759, 802, 1096
MspR9I CCNGG 7 cut(s) 197, 387, 644, 803, 1440, 1591, 1899
MunI CAATTG 1 cut(s) 1245
MvaI CCWGG 5 cut(s) 197, 387, 1440, 1591, 1899
MvnI CGCG 1 cut(s) 720
MwoI GCNNNNNNNGC 1 cut(s) 12
NaeI GCCGGC 1 cut(s) 429
NciI CCSGG 2 cut(s) 644, 803
NgoMIV GCCGGC 1 cut(s) 427
NheI GCTAGC 1 cut(s) 200
NlaIV GGNNCC 5 cut(s) 531, 757, 956, 1158, 1182
NmeAIII GCCGAG 1 cut(s) 732
NmuCI GTSAC 2 cut(s) 139, 893
NsbI TGCGCA 1 cut(s) 248
NsiI ATGCAT 2 cut(s) 67, 1708
NspI RCATGY 3 cut(s) 193, 458, 1032
OliI CACNNNNGTG 1 cut(s) 457
PagI TCATGA 2 cut(s) 1366, 1480
PasI CCCWGGG 1 cut(s) 1439
PciI ACATGT 2 cut(s) 454, 1028
PciSI GCTCTTC 1 cut(s) 57
PdiI GCCGGC 1 cut(s) 429
PfeI GAWTC 6 cut(s) 463, 522, 626, 679, 1358, 1796
PflMI CCANNNNNTGG 1 cut(s) 267
PkrI GCNGC 2 cut(s) 700, 1091
PleI GAGTC 1 cut(s) 1616
PpsI GAGTC 1 cut(s) 1616
PpuMI RGGWCCY 1 cut(s) 1650
PscI ACATGT 2 cut(s) 454, 1028
PshAI GACNNNNGTC 1 cut(s) 966
PsiI TTATAA 1 cut(s) 1008
Psp124BI GAGCTC 3 cut(s) 8, 1480, 1675
Psp5II RGGWCCY 1 cut(s) 1650
Psp6I CCWGG 5 cut(s) 195, 385, 1438, 1589, 1897
PspGI CCWGG 5 cut(s) 195, 385, 1438, 1589, 1897
PspN4I GGNNCC 5 cut(s) 531, 757, 956, 1158, 1182
PspPI GGNCC 3 cut(s) 1283, 1436, 1650
PspPPI RGGWCCY 1 cut(s) 1650
PstNI CAGNNNCTG 1 cut(s) 1859
PsuI RGATCY 3 cut(s) 117, 475, 613
RsaI GTAC 1 cut(s) 314
RsaNI GTAC 1 cut(s) 313
RseI CAYNNNNRTG 2 cut(s) 299, 457
SacI GAGCTC 3 cut(s) 8, 1480, 1675
SapI GCTCTTC 1 cut(s) 57
SaqAI TTAA 4 cut(s) 851, 1374, 1701, 1841
SatI GCNGC 2 cut(s) 699, 1090
Sau96I GGNCC 3 cut(s) 1283, 1436, 1650
SchI GAGTC 1 cut(s) 1617
ScrFI CCNGG 7 cut(s) 197, 387, 644, 803, 1440, 1591, 1899
SduI GDGCHC 5 cut(s) 8, 52, 830, 1480, 1675
SexAI ACCWGGT 1 cut(s) 385
SfaNI GCATC 6 cut(s) 30, 74, 300, 1291, 1612, 1895
SinI GGWCC 1 cut(s) 1650
SmiMI CAYNNNNRTG 2 cut(s) 299, 457
SpeI ACTAGT 1 cut(s) 1334
SsiI CCGC 5 cut(s) 718, 1059, 1090, 1502, 1665
SspI AATATT 1 cut(s) 1378
SspMI CTAG 5 cut(s) 201, 1335, 1445, 1472, 1836
SstI GAGCTC 3 cut(s) 8, 1480, 1675
StyD4I CCNGG 7 cut(s) 195, 385, 642, 801, 1438, 1589, 1897
TaaI ACNGT 6 cut(s) 139, 841, 904, 1222, 1267, 1409
TaiI ACGT 5 cut(s) 400, 600, 1118, 1178, 1432
TaqI TCGA 5 cut(s) 350, 665, 936, 1288, 1606
TauI GCSGC 1 cut(s) 1092
TfiI GAWTC 6 cut(s) 463, 522, 626, 679, 1358, 1796
Tru1I TTAA 4 cut(s) 851, 1374, 1701, 1841
Tru9I TTAA 4 cut(s) 851, 1374, 1701, 1841
TscAI CASTG 4 cut(s) 830, 1140, 1225, 1473
TseFI GTSAC 2 cut(s) 139, 893
TseI GCWGC 1 cut(s) 698
Tsp45I GTSAC 2 cut(s) 139, 893
TspDTI ATGAA 7 cut(s) 963, 1364, 1382, 1497, 1769, 1809, 1870
TspGWI ACGGA 2 cut(s) 534, 1220
TspRI CASTG 4 cut(s) 830, 1140, 1225, 1473
Van91I CCANNNNNTGG 1 cut(s) 267
VneI GTGCAC 1 cut(s) 826
VpaK11BI GGWCC 1 cut(s) 1650
XapI RAATTY 5 cut(s) 648, 669, 938, 1526, 1728
XceI RCATGY 3 cut(s) 193, 458, 1032
XcmI CCANNNNNNNNNTGG 2 cut(s) 215, 1219
XspI CTAG 5 cut(s) 201, 1335, 1445, 1472, 1836
Zsp2I ATGCAT 2 cut(s) 67, 1708
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.