Rmu_sc0000309.1_g000050

Domain of unknown function (DUF4283)

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000309.1
Physical Location & Seq
Reverse (-)
268036 .. 269553
1518 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0000309.1_g000050.1.cds

Sequence Viewer

Length: 1518 bp
atgacggcaatttgcccttggacgtttctggcagatgatgctccacagatgccagcagcgccatcgcctccgaaggctaagtctttcgcttccatcctcagaaattcgatggaaacatcaatcacgtatagccaattgccgcctcccatggtgagaggtggaaagacgtatgtgaaaattagtgaagatttgtaccaggatcaactgaaatcatttaagactaacttaattggtagattgctgctaagaaagggttcgcctccttgcaaggctactgatccaaaggttgtgctgcacaagctttggcagcctatttccccatggcgtttggtgcctctaaggaaggggttttttgatattcactttgaaactgaggaagacatgcgacgcgtttggggcggaggcacatgtaccctaactaatggaattttccggttatcgcagtggaaacaagattttaaacctggagatacttgtcctcaaacgcatgctcaggtctgggttcgcatacttggccttagccaagactattggcatccaaggcatctgcttgaaattgcgcgaggtattggtactccattgcagttagatcgagctactaaagagagggcctttggatactttgcccgggttctagtagatgttgacctcactggttctcttccatctactctcatggtggaaagagaaggctatgaatttgaggttagtttggagtatgaaaggctcccaccaatttgtagctgctgtggtttggttggtcatgatgtcaatcactgtcgacagcgtaaatctacggaggatccgaagaagaatgtgaaaactactgaagcatccaagcaagttgcagggaagcaagaatatcggcctgtcaagtctatagttgttaaagctcccattgctactgcactgattcccacggaattgatcgttaattccccaattgcagaggacattattgagaatgcacagcttggtaataacagagactcaagcgcggtggagcagtttgtgaaccaagtaattgctgaggcggcaaatgaagaaattgatcgtattgcacaggtggtggctgctgaaccattggttgagaatatctctcagggagagaatgtagctatcaattcaactgatttgtctagaagtcctactcatgtgagcaacactattccatatccgtccaagtcatggttcgataaggtggaagaggaacagaatactagtacgagtgttagtcctgagttccctcccggtttcaccccggcaaatgcttgtcaccttgagggctcttcttcgtcctctactgctttaccacagcatgtacagaaggatattgcagtagttaattcatggttgttgggtaaggatttcattgaggatcatgctttgtcatacttgggccctaataaaatcctcacgcgttctcaacggaaaaggttacgaaagaaaattcgagatacaatcagtcagaatggaaacccctcctctggtggggctcttgctctctcttcaaaatga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

505

Amino Acids

56.08

Weight (kDa)

8.26

Isoelectric Point (pI)

49.09

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000044)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G07760 AT5G28823
fragaria_vesca FvH4_1g13572 FvH4_2g03281 FvH4_2g04691 FvH4_2g08332 FvH4_2g08333 FvH4_2g15313 FvH4_2g26101 FvH4_2g29541 FvH4_3g06911 FvH4_3g34351 FvH4_3g43733 FvH4_4g02432 FvH4_4g05601 FvH4_4g08213 FvH4_4g09961 FvH4_4g10131 FvH4_4g20001 FvH4_4g20002 FvH4_5g01051 FvH4_5g01401 FvH4_5g27943 FvH4_6g09220 FvH4_6g17383 FvH4_6g35491 FvH4_6g46421 FvH4_7g04151 FvH4_7g13962 FvH4_7g18611 FvH4_7g19491 FvH4_7g19511 FvH4_7g26562
malus_domestica MD06G1221600.v1.1
pyrus_communis pycom10g21150
rosa_chinensis RchiOBHm_Chr1g0337571 RchiOBHm_Chr2g0168771 RchiOBHm_Chr3g0453631 RchiOBHm_Chr6g0278581
rosa_laevigata RLG00000001899 RLG00000001925 RLG00000002026 RLG00000003410 RLG00000003767 RLG00000004304 RLG00000004473 RLG00000004677 RLG00000006856 RLG00000007994 RLG00000009888 RLG00000011627 RLG00000012174 RLG00000012217 RLG00000013118 RLG00000013736 RLG00000014194 RLG00000014251 RLG00000015011 RLG00000015057 RLG00000015235 RLG00000017416 RLG00000018052 RLG00000018537 RLG00000019968 RLG00000020096 RLG00000020263 RLG00000022606 RLG00000023119 RLG00000028111 RLG00000029686 RLG00000030126 RLG00000031124 RLG00000031236 RLG00000032766 RLG00000033171 RLG00000033548 RLG00000033987 RLG00000034062 RLG00000035115 RLG00000035863
rosa_multiflora Rmu_co8036712.1_g000001 Rmu_co8080248.1_g000001 Rmu_co8208334.1_g000001 Rmu_co8253451.1_g000001 Rmu_co8393241.1_g000001 Rmu_co8522225.1_g000005 Rmu_sc0000060.1_g000030 Rmu_sc0000060.1_g000031 Rmu_sc0000060.1_g000032 Rmu_sc0000090.1_g000008 Rmu_sc0000149.1_g000051 Rmu_sc0000149.1_g000058 Rmu_sc0000309.1_g000050 Rmu_sc0000370.1_g000022 Rmu_sc0000370.1_g000023 Rmu_sc0000370.1_g000024 Rmu_sc0000418.1_g000018 Rmu_sc0000427.1_g000014 Rmu_sc0000427.1_g000015 Rmu_sc0000434.1_g000008 Rmu_sc0000487.1_g000038 Rmu_sc0000487.1_g000039 Rmu_sc0000569.1_g000029 Rmu_sc0000580.1_g000097 Rmu_sc0000595.1_g000068 Rmu_sc0000607.1_g000027 Rmu_sc0000738.1_g000004 Rmu_sc0000758.1_g000001 Rmu_sc0000758.1_g000002 Rmu_sc0000870.1_g000019 Rmu_sc0000924.1_g000040 Rmu_sc0000924.1_g000041 Rmu_sc0000999.1_g000037 Rmu_sc0001001.1_g000001 Rmu_sc0001010.1_g000080 Rmu_sc0001075.1_g000041 Rmu_sc0001097.1_g000016 Rmu_sc0001173.1_g000020 Rmu_sc0001258.1_g000010 Rmu_sc0001425.1_g000031 Rmu_sc0001493.1_g000020 Rmu_sc0001493.1_g000021 Rmu_sc0001644.1_g000024 Rmu_sc0001648.1_g000039 Rmu_sc0001662.1_g000002 Rmu_sc0001849.1_g000046 Rmu_sc0001851.1_g000038 Rmu_sc0001861.1_g000006 Rmu_sc0001899.1_g000008 Rmu_sc0002231.1_g000023 Rmu_sc0002393.1_g000012 Rmu_sc0002515.1_g000010 Rmu_sc0002551.1_g000013 Rmu_sc0002680.1_g000029 Rmu_sc0002700.1_g000030 Rmu_sc0002700.1_g000031 Rmu_sc0002709.1_g000035 Rmu_sc0002779.1_g000017 Rmu_sc0003267.1_g000040 Rmu_sc0003306.1_g000009 Rmu_sc0003338.1_g000014 Rmu_sc0003522.1_g000038 Rmu_sc0003522.1_g000039 Rmu_sc0003653.1_g000031 Rmu_sc0003901.1_g000003 Rmu_sc0003920.1_g000009 Rmu_sc0004014.1_g000009 Rmu_sc0004016.1_g000013 Rmu_sc0004031.1_g000002 Rmu_sc0004106.1_g000001 Rmu_sc0004432.1_g000004 Rmu_sc0004481.1_g000020 Rmu_sc0004874.1_g000005 Rmu_sc0004928.1_g000005 Rmu_sc0005065.1_g000053 Rmu_sc0005091.1_g000005 Rmu_sc0005217.1_g000015 Rmu_sc0005242.1_g000002 Rmu_sc0005300.1_g000011 Rmu_sc0005400.1_g000004 Rmu_sc0005486.1_g000007 Rmu_sc0005527.1_g000015 Rmu_sc0006059.1_g000021 Rmu_sc0006087.1_g000004 Rmu_sc0006184.1_g000006 Rmu_sc0006184.1_g000007 Rmu_sc0006578.1_g000006 Rmu_sc0006730.1_g000010 Rmu_sc0006736.1_g000030 Rmu_sc0006736.1_g000033 Rmu_sc0007333.1_g000018 Rmu_sc0007856.1_g000010 Rmu_sc0008231.1_g000003 Rmu_sc0009862.1_g000012 Rmu_sc0010547.1_g000001 Rmu_sc0010547.1_g000003 Rmu_sc0010632.1_g000012 Rmu_sc0010747.1_g000008 Rmu_sc0011075.1_g000009 Rmu_sc0011565.1_g000004 Rmu_sc0011641.1_g000003 Rmu_sc0013102.1_g000013 Rmu_sc0013160.1_g000006 Rmu_sc0014846.1_g000004 Rmu_sc0017037.1_g000003 Rmu_sc0018203.1_g000001 Rmu_sc0018204.1_g000001 Rmu_sc0018348.1_g000001 Rmu_sc0019354.1_g000002 Rmu_sc0021630.1_g000002 Rmu_sc0022987.1_g000002 Rmu_sc0024469.1_g000005 Rmu_sc0033519.1_g000001 Rmu_sc0033519.1_g000002 Rmu_sc0033519.1_g000003 Rmu_sc0042775.1_g000001 Rmu_ssc0000110.1_g000003 Rmu_ssc0000110.1_g000004 Rmu_ssc0000126.1_g000068 Rmu_ssc0000200.1_g000007 Rmu_ssc0000295.1_g000003 Rmu_ssc0000295.1_g000004 Rmu_ssc0000299.1_g000010 Rmu_ssc0000308.1_g000024 Rmu_ssc0000339.1_g000006 Rmu_ssc0000385.1_g000012 Rmu_ssc0000409.1_g000004 Rmu_ssc0000421.1_g000004
rosa_roxburghii Rroxscaffold_156G00440360 Rroxscaffold_166G00440800 Rroxscaffold_1G00039040 Rroxscaffold_1G00039050 Rroxscaffold_1G00073950 Rroxscaffold_2G00091710 Rroxscaffold_2G00120050 Rroxscaffold_2G00122590 Rroxscaffold_3G00219700 Rroxscaffold_3G00264140 Rroxscaffold_4G00290600 Rroxscaffold_4G00323610 Rroxscaffold_4G00328460 Rroxscaffold_5G00343440 Rroxscaffold_5G00343570 Rroxscaffold_5G00378540 Rroxscaffold_5G00385090 Rroxscaffold_7G00169130 Rroxscaffold_7G00216420
rosa_rugosa Rorug01G0065800 Rorug01G0073500 Rorug01G0091700 Rorug01G0096500 Rorug01G0204700.1 Rorug01G0249100 Rorug01G0333800 Rorug01G0333900 Rorug01G0339500 Rorug01G0431300 Rorug02G0085400 Rorug02G0117500 Rorug02G0130900 Rorug02G0178800 Rorug02G0226700 Rorug02G0336300 Rorug02G0338700 Rorug02G0351400 Rorug02G0459900 Rorug03G0187000 Rorug03G0223700 Rorug03G0291300 Rorug03G0291300 Rorug03G0311100 Rorug03G0316900 Rorug03G0346000 Rorug04G0014500 Rorug04G0014600 Rorug04G0124100 Rorug04G0136500 Rorug04G0302000 Rorug04G0338100 Rorug04G0338200 Rorug04G0413100 Rorug05G0182200 Rorug05G0226500 Rorug05G0273300 Rorug05G0292200 Rorug05G0292200 Rorug05G0392500 Rorug05G0394500 Rorug05G0394600 Rorug05G0505600.1 Rorug06G0351400 Rorug06G0393400 Rorug06G0393600 Rorug06G0470000 Rorug07G0063100 Rorug07G0086800 Rorug07G0109200 Rorug07G0236100
rosa_samantha Rh1AG010800 Rh1AG011100 Rh1AG064900 Rh1AG088000 Rh1AG207100 Rh1AG262000 Rh1AG300800 Rh1BG043000 Rh1BG144600 Rh1BG180700 Rh1BG180800 Rh1BG328800 Rh1BG399400 Rh1CG041400 Rh1CG047300 Rh1CG379700 Rh1DG036500 Rh1DG083000 Rh1DG210700 Rh1DG210800 Rh1DG231100 Rh2AG007900 Rh2AG055500 Rh2AG339100 Rh2AG368100 Rh2BG243300 Rh2BG258900 Rh2BG292000 Rh2BG333500 Rh2BG387300 Rh2BG612800 Rh2BG619100 Rh2CG026500 Rh2CG163600 Rh2CG535700 Rh2DG186400 Rh2DG235000 Rh2DG314500 Rh2DG388500 Rh2DG391400 Rh2DG496900 Rh2DG526700 Rh2DG570700 Rh3AG330700 Rh3BG266900 Rh3CG236000 Rh3CG340400 Rh3DG090000 Rh3DG278400 Rh3DG297600 Rh3DG362600 Rh4AG001300 Rh4AG023300 Rh4AG097100 Rh4AG427000 Rh4BG029400 Rh4BG032400 Rh4BG086000 Rh4BG249200 Rh4CG001900 Rh4CG040600 Rh4CG093000 Rh4CG106300 Rh4CG113200 Rh4CG113900 Rh4DG002300 Rh4DG144400 Rh4DG234200 Rh5AG043700 Rh5AG084900 Rh5AG161500 Rh5AG409000 Rh5AG457200 Rh5AG457900 Rh5AG473700 Rh5AG520600 Rh5BG042100 Rh5BG124100 Rh5BG323500 Rh5BG417200 Rh5BG443700 Rh5BG451500 Rh5BG464900 Rh5BG470400 Rh5BG522500 Rh5CG068800 Rh5CG178300 Rh5CG231000 Rh5CG258600 Rh5CG394500 Rh5CG473700 Rh5DG164700 Rh5DG235400 Rh5DG261300 Rh5DG304900 Rh5DG334500 Rh5DG424300 Rh5DG458400 Rh5DG478600 Rh5DG552300 Rh5DG552700 Rh6AG037000 Rh6AG042100 Rh6AG255500 Rh6AG283400 Rh6AG291800 Rh6BG049600 Rh6BG080700 Rh6BG114600 Rh6BG128900 Rh6BG352500 Rh6CG052400 Rh6CG112900 Rh6CG113000 Rh6CG131300 Rh6CG157700 Rh6CG243200 Rh6CG254100 Rh6CG275700 Rh6CG299700 Rh6CG309100 Rh6CG317600 Rh6CG342600 Rh6CG471900 Rh6DG038200 Rh6DG102300 Rh6DG114400 Rh6DG225900 Rh6DG292900 Rh6DG320700 Rh6DG512800 Rh7AG217700 Rh7AG313900 Rh7AG446000 Rh7AG472600 Rh7BG223100 Rh7BG349900 Rh7BG352000 Rh7CG160200 Rh7CG233900 Rh7CG242700 Rh7CG273900 Rh7CG306400 Rh7CG322200 Rh7DG053800 Rh7DG077800 Rh7DG227700 Rh7DG404800
rosa_wichuraiana Rw0G003990 Rw2G022110 Rw2G024890 Rw6G005700 Rw7G008770

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 331
AccB7I CCANNNNNTGG 1 cut(s) 1188
AccI GTMKAC 1 cut(s) 781
AccII CGCG 4 cut(s) 390, 562, 998, 1420
AciI CCGC 4 cut(s) 140, 399, 998, 1034
AclWI GGATC 5 cut(s) 207, 272, 797, 810, 1386
AcsI RAATTY 4 cut(s) 103, 426, 698, 1449
AcuI CTGAAG 1 cut(s) 849
AfaI GTAC 5 cut(s) 194, 412, 574, 1225, 1323
AfiI CCNNNNNNNGG 3 cut(s) 1188, 1487, 1491
AflIII ACRYGT 3 cut(s) 388, 407, 1418
AgsI TTSAA 4 cut(s) 368, 554, 1128, 1512
AhlI ACTAGT 1 cut(s) 1220
AjnI CCWGG 2 cut(s) 195, 463
AjuI GAANNNNNNNTTGG 2 cut(s) 1175, 1207
AluBI AGCT 6 cut(s) 301, 596, 744, 893, 973, 1118
AluI AGCT 6 cut(s) 301, 596, 744, 893, 973, 1118
Alw26I GTCTC 1 cut(s) 981
AlwI GGATC 5 cut(s) 207, 272, 797, 810, 1386
Ama87I CYCGRG 1 cut(s) 627
AoxI GGCC 4 cut(s) 514, 609, 866, 1399
ApaI GGGCCC 1 cut(s) 1403
ApeKI GCWGC 6 cut(s) 56, 241, 292, 307, 744, 1073
ApoI RAATTY 4 cut(s) 103, 426, 698, 1449
ArsI GACNNNNNNTTYG 2 cut(s) 65, 97
Asp700I GAANNNNTTC 1 cut(s) 253
AspLEI GCGC 3 cut(s) 61, 562, 998
AspS9I GGNCC 3 cut(s) 609, 1399, 1400
AsuC2I CCSGG 4 cut(s) 628, 629, 1251, 1262
AsuHPI GGTGA 3 cut(s) 163, 1249, 1268
AvaI CYCGRG 1 cut(s) 627
BaeGI GKGCMC 1 cut(s) 1403
BamHI GGATCC 1 cut(s) 802
BanI GGYRCC 1 cut(s) 331
BanII GRGCYC 3 cut(s) 1289, 1403, 1498
BbsI GAAGAC 1 cut(s) 384
BbvCI CCTCAGC 1 cut(s) 1029
BbvI GCAGC 6 cut(s) 68, 228, 279, 319, 731, 1060
BccI CCATC 4 cut(s) 70, 101, 103, 673
BceAI ACGGC 1 cut(s) 21
BcgI CGANNNNNNTGC 6 cut(s) 45, 79, 572, 606, 845, 879
BciT130I CCWGG 2 cut(s) 197, 465
BciVI GTATCC 1 cut(s) 611
BcnI CCSGG 4 cut(s) 628, 629, 1251, 1262
BcoDI GTCTC 1 cut(s) 981
BcuI ACTAGT 1 cut(s) 1220
BfaI CTAG 3 cut(s) 635, 1140, 1221
BfmI CTRYAG 1 cut(s) 879
BfoI RGCGCY 1 cut(s) 62
BfuI GTATCC 1 cut(s) 611
BisI GCNGC 8 cut(s) 57, 140, 242, 293, 308, 745, 1035, 1074
BlsI GCNGC 8 cut(s) 58, 141, 243, 294, 309, 746, 1036, 1075
Bme1390I CCNGG 6 cut(s) 197, 465, 628, 629, 1251, 1262
BmeT110I CYCGRG 1 cut(s) 627
BmgT120I GGNCC 3 cut(s) 609, 1399, 1400
BmiI GGNNCC 4 cut(s) 333, 728, 804, 1401
BmrFI CCNGG 6 cut(s) 197, 465, 628, 629, 1251, 1262
BmsI GCATC 5 cut(s) 28, 39, 544, 553, 842
BpiI GAAGAC 1 cut(s) 384
BplI GAGNNNNNCTC 2 cut(s) 1082, 1114
BpmI CTGGAG 1 cut(s) 486
Bpu10I CCTNAGC 3 cut(s) 492, 518, 1029
BpuEI CTTGAG 2 cut(s) 976, 1301
BpuMI CCSGG 4 cut(s) 628, 629, 1251, 1262
BsaAI YACGTR 1 cut(s) 126
BsaBI GATNNNNATC 1 cut(s) 771
BsaJI CCNNGG 7 cut(s) 17, 147, 320, 539, 627, 918, 1260
BsaWI WCCGGW 1 cut(s) 432
BsaXI ACNNNNNCTCC 2 cut(s) 1098, 1128
Bsc4I CCNNNNNNNGG 3 cut(s) 1188, 1487, 1491
Bse1I ACTGG 1 cut(s) 658
Bse3DI GCAATG 2 cut(s) 578, 897
Bse8I GATNNNNATC 1 cut(s) 771
BseBI CCWGG 2 cut(s) 197, 465
BseDI CCNNGG 7 cut(s) 17, 147, 320, 539, 627, 918, 1260
BseGI GGATG 3 cut(s) 93, 535, 833
BseJI GATNNNNATC 1 cut(s) 771
BseLI CCNNNNNNNGG 3 cut(s) 1188, 1487, 1491
BseMI GCAATG 2 cut(s) 578, 897
BseMII CTCAG 6 cut(s) 112, 363, 506, 1020, 1115, 1230
BseNI ACTGG 1 cut(s) 658
BseRI GAGGAG 1 cut(s) 1474
BseSI GKGCMC 1 cut(s) 1403
BseXI GCAGC 6 cut(s) 68, 228, 279, 319, 731, 1060
BsgI GTGCAG 2 cut(s) 278, 891
Bsh1236I CGCG 4 cut(s) 390, 562, 998, 1420
BshFI GGCC 4 cut(s) 516, 611, 868, 1401
BshNI GGYRCC 1 cut(s) 331
BsiHKCI CYCGRG 1 cut(s) 627
BsiSI CCGG 4 cut(s) 433, 628, 1251, 1262
BslI CCNNNNNNNGG 3 cut(s) 1188, 1487, 1491
BsmAI GTCTC 1 cut(s) 981
BsmI GAATGC 1 cut(s) 970
BsnI GGCC 4 cut(s) 516, 611, 868, 1401
BsoBI CYCGRG 1 cut(s) 627
Bsp120I GGGCCC 1 cut(s) 1399
Bsp1286I GDGCHC 3 cut(s) 1289, 1403, 1498
Bsp1407I TGTACA 1 cut(s) 1321
Bsp143I GATC 7 cut(s) 199, 277, 589, 802, 927, 1051, 1378
Bsp19I CCATGG 2 cut(s) 147, 320
BspACI CCGC 4 cut(s) 140, 399, 998, 1034
BspANI GGCC 4 cut(s) 516, 611, 868, 1401
BspCNI CTCAG 6 cut(s) 111, 364, 505, 1021, 1114, 1231
BspFNI CGCG 4 cut(s) 390, 562, 998, 1420
BspHI TCATGA 1 cut(s) 763
BspLI GGNNCC 4 cut(s) 333, 728, 804, 1401
BspPI GGATC 5 cut(s) 207, 272, 797, 810, 1386
BspQI GCTCTTC 1 cut(s) 1294
BspT107I GGYRCC 1 cut(s) 331
BsrDI GCAATG 2 cut(s) 578, 897
BsrGI TGTACA 1 cut(s) 1321
BsrI ACTGG 1 cut(s) 658
BssECI CCNNGG 7 cut(s) 17, 147, 320, 539, 627, 918, 1260
BssMI GATC 7 cut(s) 199, 277, 589, 802, 927, 1051, 1378
BssT1I CCWWGG 4 cut(s) 17, 147, 320, 539
Bst2UI CCWGG 2 cut(s) 197, 465
Bst4CI ACNGT 1 cut(s) 779
Bst6I CTCTTC 4 cut(s) 666, 1200, 1294, 1513
BstAPI GCANNNNNTGC 1 cut(s) 38
BstAUI TGTACA 1 cut(s) 1321
BstBAI YACGTR 1 cut(s) 126
BstC8I GCNNGC 2 cut(s) 54, 489
BstDSI CCRYGG 3 cut(s) 147, 320, 918
BstF5I GGATG 3 cut(s) 93, 535, 833
BstFNI CGCG 4 cut(s) 390, 562, 998, 1420
BstH2I RGCGCY 1 cut(s) 62
BstHHI GCGC 3 cut(s) 61, 562, 998
BstKTI GATC 7 cut(s) 202, 280, 592, 805, 930, 1054, 1381
BstMAI GTCTC 1 cut(s) 981
BstMBI GATC 7 cut(s) 199, 277, 589, 802, 927, 1051, 1378
BstNI CCWGG 2 cut(s) 197, 465
BstNSI RCATGY 4 cut(s) 385, 411, 491, 1322
BstSCI CCNGG 6 cut(s) 195, 463, 626, 627, 1249, 1260
BstSFI CTRYAG 1 cut(s) 879
BstSLI GKGCMC 1 cut(s) 1403
BstUI CGCG 4 cut(s) 390, 562, 998, 1420
BstV1I GCAGC 6 cut(s) 68, 228, 279, 319, 731, 1060
BstV2I GAAGAC 1 cut(s) 384
BstX2I RGATCY 1 cut(s) 802
BstYI RGATCY 1 cut(s) 802
BsuI GTATCC 1 cut(s) 611
BsuRI GGCC 4 cut(s) 516, 611, 868, 1401
BtgI CCRYGG 3 cut(s) 147, 320, 918
BtgZI GCGATG 1 cut(s) 48
BtsCI GGATG 3 cut(s) 93, 535, 833
BtsI GCAGTG 1 cut(s) 449
BtsIMutI CAGTG 4 cut(s) 449, 651, 775, 908
Cac8I GCNNGC 2 cut(s) 54, 489
CciI TCATGA 1 cut(s) 763
CfoI GCGC 3 cut(s) 61, 562, 998
Cfr13I GGNCC 3 cut(s) 609, 1399, 1400
Cfr9I CCCGGG 1 cut(s) 627
CseI GACGC 1 cut(s) 396
Csp6I GTAC 5 cut(s) 193, 411, 573, 1224, 1322
CspCI CAANNNNNGTGG 2 cut(s) 981, 1016
CviQI GTAC 5 cut(s) 193, 411, 573, 1224, 1322
DpnI GATC 7 cut(s) 201, 279, 591, 804, 929, 1053, 1380
DpnII GATC 7 cut(s) 199, 277, 589, 802, 927, 1051, 1378
DraI TTTAAA 1 cut(s) 460
Eam1104I CTCTTC 4 cut(s) 666, 1200, 1294, 1513
EarI CTCTTC 4 cut(s) 666, 1200, 1294, 1513
EciI GGCGGA 1 cut(s) 414
Eco130I CCWWGG 4 cut(s) 17, 147, 320, 539
Eco24I GRGCYC 3 cut(s) 1289, 1403, 1498
Eco57I CTGAAG 1 cut(s) 849
Eco88I CYCGRG 1 cut(s) 627
EcoO109I RGGNCCY 2 cut(s) 609, 1400
EcoRII CCWGG 2 cut(s) 195, 463
EcoT14I CCWWGG 4 cut(s) 17, 147, 320, 539
EcoT38I GRGCYC 3 cut(s) 1289, 1403, 1498
ErhI CCWWGG 4 cut(s) 17, 147, 320, 539
FalI AAGNNNNNCTT 2 cut(s) 209, 241
FblI GTMKAC 1 cut(s) 781
Fnu4HI GCNGC 8 cut(s) 57, 140, 242, 293, 308, 745, 1035, 1074
FokI GGATG 3 cut(s) 80, 522, 820
FriOI GRGCYC 3 cut(s) 1289, 1403, 1498
Fsp4HI GCNGC 8 cut(s) 57, 140, 242, 293, 308, 745, 1035, 1074
FspBI CTAG 3 cut(s) 635, 1140, 1221
GlaI GCGC 3 cut(s) 60, 561, 997
GluI GCNGC 8 cut(s) 57, 140, 242, 293, 308, 745, 1035, 1074
GsuI CTGGAG 1 cut(s) 486
HaeII RGCGCY 1 cut(s) 62
HaeIII GGCC 4 cut(s) 516, 611, 868, 1401
HapII CCGG 4 cut(s) 433, 628, 1251, 1262
HgaI GACGC 1 cut(s) 396
HhaI GCGC 3 cut(s) 61, 562, 998
Hin6I GCGC 3 cut(s) 59, 560, 996
HinP1I GCGC 3 cut(s) 59, 560, 996
HincII GTYRAC 2 cut(s) 646, 782
HindII GTYRAC 2 cut(s) 646, 782
HindIII AAGCTT 1 cut(s) 299
HinfI GANTC 2 cut(s) 913, 989
HpaII CCGG 4 cut(s) 433, 628, 1251, 1262
HphI GGTGA 3 cut(s) 163, 1249, 1268
Hpy166II GTNNAC 3 cut(s) 646, 782, 1015
Hpy188I TCNGA 4 cut(s) 72, 101, 807, 1470
Hpy188III TCNNGA 4 cut(s) 764, 1140, 1238, 1454
Hpy8I GTNNAC 3 cut(s) 646, 782, 1015
Hpy99I CGWCG 1 cut(s) 390
HpyAV CCTTC 4 cut(s) 67, 337, 683, 1321
HpyCH4III ACNGT 1 cut(s) 779
HpyCH4IV ACGT 3 cut(s) 23, 125, 167
HpyCH4V TGCA 9 cut(s) 267, 295, 583, 848, 908, 947, 968, 1061, 1337
HpySE526I ACGT 3 cut(s) 23, 125, 167
HspAI GCGC 3 cut(s) 59, 560, 996
Kzo9I GATC 7 cut(s) 199, 277, 589, 802, 927, 1051, 1378
LguI GCTCTTC 1 cut(s) 1294
LmnI GCTCC 4 cut(s) 46, 732, 898, 1003
Lsp1109I GCAGC 6 cut(s) 68, 228, 279, 319, 731, 1060
LweI GCATC 5 cut(s) 28, 39, 544, 553, 842
MaeI CTAG 3 cut(s) 635, 1140, 1221
MaeII ACGT 3 cut(s) 23, 125, 167
MaeIII GTNAC 2 cut(s) 1274, 1437
MalI GATC 7 cut(s) 201, 279, 591, 804, 929, 1053, 1380
MboI GATC 7 cut(s) 199, 277, 589, 802, 927, 1051, 1378
MfeI CAATTG 2 cut(s) 134, 942
MflI RGATCY 1 cut(s) 802
MhlI GDGCHC 3 cut(s) 1289, 1403, 1498
MluI ACGCGT 2 cut(s) 388, 1418
MlyI GAGTC 1 cut(s) 983
MroXI GAANNNNTTC 1 cut(s) 253
MseI TTAA 6 cut(s) 216, 227, 459, 888, 933, 1344
MspI CCGG 4 cut(s) 433, 628, 1251, 1262
MspR9I CCNGG 6 cut(s) 197, 465, 628, 629, 1251, 1262
MunI CAATTG 2 cut(s) 134, 942
Mva1269I GAATGC 1 cut(s) 970
MvaI CCWGG 2 cut(s) 197, 465
MvnI CGCG 4 cut(s) 390, 562, 998, 1420
NciI CCSGG 4 cut(s) 628, 629, 1251, 1262
NcoI CCATGG 2 cut(s) 147, 320
NdeII GATC 7 cut(s) 199, 277, 589, 802, 927, 1051, 1378
NlaIV GGNNCC 4 cut(s) 333, 728, 804, 1401
NmuCI GTSAC 1 cut(s) 1274
NspI RCATGY 4 cut(s) 385, 411, 491, 1322
PaeI GCATGC 1 cut(s) 491
PagI TCATGA 1 cut(s) 763
PciI ACATGT 1 cut(s) 407
PciSI GCTCTTC 1 cut(s) 1294
PcsI WCGNNNNNNNCGW 1 cut(s) 803
PctI GAATGC 1 cut(s) 970
PdmI GAANNNNTTC 1 cut(s) 253
PfeI GAWTC 1 cut(s) 913
PflMI CCANNNNNTGG 1 cut(s) 1188
PkrI GCNGC 8 cut(s) 58, 141, 243, 294, 309, 746, 1036, 1075
PleI GAGTC 1 cut(s) 983
PpsI GAGTC 1 cut(s) 983
Ppu21I YACGTR 1 cut(s) 126
PscI ACATGT 1 cut(s) 407
Psp6I CCWGG 2 cut(s) 195, 463
PspGI CCWGG 2 cut(s) 195, 463
PspN4I GGNNCC 4 cut(s) 333, 728, 804, 1401
PspOMI GGGCCC 1 cut(s) 1399
PspPI GGNCC 3 cut(s) 609, 1399, 1400
PsuI RGATCY 1 cut(s) 802
RsaI GTAC 5 cut(s) 194, 412, 574, 1225, 1323
RsaNI GTAC 5 cut(s) 193, 411, 573, 1224, 1322
SalI GTCGAC 1 cut(s) 780
SapI GCTCTTC 1 cut(s) 1294
SaqAI TTAA 6 cut(s) 216, 227, 459, 888, 933, 1344
SatI GCNGC 8 cut(s) 57, 140, 242, 293, 308, 745, 1035, 1074
Sau3AI GATC 7 cut(s) 199, 277, 589, 802, 927, 1051, 1378
Sau96I GGNCC 3 cut(s) 609, 1399, 1400
SchI GAGTC 1 cut(s) 983
ScrFI CCNGG 6 cut(s) 197, 465, 628, 629, 1251, 1262
SduI GDGCHC 3 cut(s) 1289, 1403, 1498
SfaNI GCATC 5 cut(s) 28, 39, 544, 553, 842
SfcI CTRYAG 1 cut(s) 879
SmaI CCCGGG 1 cut(s) 629
SmlI CTYRAG 2 cut(s) 991, 1280
SmoI CTYRAG 2 cut(s) 991, 1280
SpeI ACTAGT 1 cut(s) 1220
SphI GCATGC 1 cut(s) 491
SsiI CCGC 4 cut(s) 140, 399, 998, 1034
SspMI CTAG 3 cut(s) 635, 1140, 1221
StyD4I CCNGG 6 cut(s) 195, 463, 626, 627, 1249, 1260
StyI CCWWGG 4 cut(s) 17, 147, 320, 539
TaaI ACNGT 1 cut(s) 779
TaiI ACGT 3 cut(s) 26, 128, 170
TaqI TCGA 5 cut(s) 107, 592, 781, 1194, 1453
TatI WGTACW 1 cut(s) 1321
TauI GCSGC 2 cut(s) 142, 1037
TfiI GAWTC 1 cut(s) 913
Tru1I TTAA 6 cut(s) 216, 227, 459, 888, 933, 1344
Tru9I TTAA 6 cut(s) 216, 227, 459, 888, 933, 1344
TscAI CASTG 4 cut(s) 449, 658, 782, 915
TseFI GTSAC 1 cut(s) 1274
TseI GCWGC 6 cut(s) 56, 241, 292, 307, 744, 1073
Tsp45I GTSAC 1 cut(s) 1274
TspDTI ATGAA 5 cut(s) 711, 735, 1056, 1338, 1360
TspGWI ACGGA 4 cut(s) 812, 935, 1167, 1444
TspMI CCCGGG 1 cut(s) 627
TspRI CASTG 4 cut(s) 449, 658, 782, 915
Van91I CCANNNNNTGG 1 cut(s) 1188
XapI RAATTY 4 cut(s) 103, 426, 698, 1449
XbaI TCTAGA 1 cut(s) 1139
XceI RCATGY 4 cut(s) 385, 411, 491, 1322
XmaI CCCGGG 1 cut(s) 627
XmiI GTMKAC 1 cut(s) 781
XmnI GAANNNNTTC 1 cut(s) 253
XspI CTAG 3 cut(s) 635, 1140, 1221
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.