Rh4DG002300

Domain of unknown function (DUF4283)

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4D
Physical Location & Seq
Forward (+)
473942 .. 481809
7868 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh4DG002300.1

Sequence Viewer

Length: 1047 bp
ATGGCGGTCGACGTCTCTACGACGCCGCAACCATACAAACCCTCATATGCTGCATCCCTGAGTGCGGCTTCTCCGCTTCCTTTTGCAATCTCAGACCTGCCAGCCCCGTTCACGGAGGAGGGGTTGGTTTCGATTAGAATCTCTGAAGAACCTTACCTCCGAGGGCTTGATAGATGCAAAACAAATTTGATTGGTCGGGTTTCTTCTCCTATCAAAACACATGACCTGGTCCAACAACTGAATATGCATTGGTCTGGCCTAGAAAATTGGACTGCCGCTCCCCTTGGAAGGGGTTTCTTCATGCTGCAATTTAAAACCATGGTGGACATGCAACGTTCTTGTCGCTCCAGTGTGGTTGAGCAGAGTCAGGATGTAATTGTCAGGGGAAGGTCTGTGGAGAGATCAAACCACGGAAACAAAAAGAGAAACGCCAAGTCTCGCAAGAATAGGGTTCATTCTCGTATGGATAATGCGACCCAGACTCCGCATGCAGACGCGGTCAACTCTCCTCCATCAGACGCGGTCCACGATCTGCCCACAAACTCAGTCATGGTTTCCAGTCCGGTGGCTGCAACGTCGTACCTTCCGGCTCCTGTAATCCAAGCTGACTCCAGCGATAGCATCCCCCCTGGTTTCACGAGGCGTGAAACTAACTTAGCGCTGCCAGCTGCAAGCTCTACCTCTACTCCGGTGGCAGCAGGATTTATTCCTCCATTGGTTCATAATCATAGTCAAAGCATCTCGGAAGATGGTCAGTTGGATATGTCAGATGAGGTTCAGGAAGAGGGTGAATTCACTCCAGTTATTTCTAAAAAATCCAAGAAACTGCAGAAACAAGTTGAAAAGAGTAAGAAGAAAACCCTAGCCCGGAAGCCATCTGGACGTGCTGCCCTTACCAAGGGAGCTAGTCTAAAAGATATAGTAGAAGGCAACCGCGCTAATCTGGTACACACTGCATGGGCTTTATTGTCCCTCATCGATGCCGGGCAGATCGAGGAAGTTAAATCAAATGGTTCACACTCAAAAGTGAAGTGTACTTTCTGCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

348

Amino Acids

37.75

Weight (kDa)

9.28

Isoelectric Point (pI)

55.58

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000044)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G07760 AT5G28823
fragaria_vesca FvH4_1g13572 FvH4_2g03281 FvH4_2g04691 FvH4_2g08332 FvH4_2g08333 FvH4_2g15313 FvH4_2g26101 FvH4_2g29541 FvH4_3g06911 FvH4_3g34351 FvH4_3g43733 FvH4_4g02432 FvH4_4g05601 FvH4_4g08213 FvH4_4g09961 FvH4_4g10131 FvH4_4g20001 FvH4_4g20002 FvH4_5g01051 FvH4_5g01401 FvH4_5g27943 FvH4_6g09220 FvH4_6g17383 FvH4_6g35491 FvH4_6g46421 FvH4_7g04151 FvH4_7g13962 FvH4_7g18611 FvH4_7g19491 FvH4_7g19511 FvH4_7g26562
malus_domestica MD06G1221600.v1.1
pyrus_communis pycom10g21150
rosa_chinensis RchiOBHm_Chr1g0337571 RchiOBHm_Chr2g0168771 RchiOBHm_Chr3g0453631 RchiOBHm_Chr6g0278581
rosa_laevigata RLG00000001899 RLG00000001925 RLG00000002026 RLG00000003410 RLG00000003767 RLG00000004304 RLG00000004473 RLG00000004677 RLG00000006856 RLG00000007994 RLG00000009888 RLG00000011627 RLG00000012174 RLG00000012217 RLG00000013118 RLG00000013736 RLG00000014194 RLG00000014251 RLG00000015011 RLG00000015057 RLG00000015235 RLG00000017416 RLG00000018052 RLG00000018537 RLG00000019968 RLG00000020096 RLG00000020263 RLG00000022606 RLG00000023119 RLG00000028111 RLG00000029686 RLG00000030126 RLG00000031124 RLG00000031236 RLG00000032766 RLG00000033171 RLG00000033548 RLG00000033987 RLG00000034062 RLG00000035115 RLG00000035863
rosa_multiflora Rmu_co8036712.1_g000001 Rmu_co8080248.1_g000001 Rmu_co8208334.1_g000001 Rmu_co8253451.1_g000001 Rmu_co8393241.1_g000001 Rmu_co8522225.1_g000005 Rmu_sc0000060.1_g000030 Rmu_sc0000060.1_g000031 Rmu_sc0000060.1_g000032 Rmu_sc0000090.1_g000008 Rmu_sc0000149.1_g000051 Rmu_sc0000149.1_g000058 Rmu_sc0000309.1_g000050 Rmu_sc0000370.1_g000022 Rmu_sc0000370.1_g000023 Rmu_sc0000370.1_g000024 Rmu_sc0000418.1_g000018 Rmu_sc0000427.1_g000014 Rmu_sc0000427.1_g000015 Rmu_sc0000434.1_g000008 Rmu_sc0000487.1_g000038 Rmu_sc0000487.1_g000039 Rmu_sc0000569.1_g000029 Rmu_sc0000580.1_g000097 Rmu_sc0000595.1_g000068 Rmu_sc0000607.1_g000027 Rmu_sc0000738.1_g000004 Rmu_sc0000758.1_g000001 Rmu_sc0000758.1_g000002 Rmu_sc0000870.1_g000019 Rmu_sc0000924.1_g000040 Rmu_sc0000924.1_g000041 Rmu_sc0000999.1_g000037 Rmu_sc0001001.1_g000001 Rmu_sc0001010.1_g000080 Rmu_sc0001075.1_g000041 Rmu_sc0001097.1_g000016 Rmu_sc0001173.1_g000020 Rmu_sc0001258.1_g000010 Rmu_sc0001425.1_g000031 Rmu_sc0001493.1_g000020 Rmu_sc0001493.1_g000021 Rmu_sc0001644.1_g000024 Rmu_sc0001648.1_g000039 Rmu_sc0001662.1_g000002 Rmu_sc0001849.1_g000046 Rmu_sc0001851.1_g000038 Rmu_sc0001861.1_g000006 Rmu_sc0001899.1_g000008 Rmu_sc0002231.1_g000023 Rmu_sc0002393.1_g000012 Rmu_sc0002515.1_g000010 Rmu_sc0002551.1_g000013 Rmu_sc0002680.1_g000029 Rmu_sc0002700.1_g000030 Rmu_sc0002700.1_g000031 Rmu_sc0002709.1_g000035 Rmu_sc0002779.1_g000017 Rmu_sc0003267.1_g000040 Rmu_sc0003306.1_g000009 Rmu_sc0003338.1_g000014 Rmu_sc0003522.1_g000038 Rmu_sc0003522.1_g000039 Rmu_sc0003653.1_g000031 Rmu_sc0003901.1_g000003 Rmu_sc0003920.1_g000009 Rmu_sc0004014.1_g000009 Rmu_sc0004016.1_g000013 Rmu_sc0004031.1_g000002 Rmu_sc0004106.1_g000001 Rmu_sc0004432.1_g000004 Rmu_sc0004481.1_g000020 Rmu_sc0004874.1_g000005 Rmu_sc0004928.1_g000005 Rmu_sc0005065.1_g000053 Rmu_sc0005091.1_g000005 Rmu_sc0005217.1_g000015 Rmu_sc0005242.1_g000002 Rmu_sc0005300.1_g000011 Rmu_sc0005400.1_g000004 Rmu_sc0005486.1_g000007 Rmu_sc0005527.1_g000015 Rmu_sc0006059.1_g000021 Rmu_sc0006087.1_g000004 Rmu_sc0006184.1_g000006 Rmu_sc0006184.1_g000007 Rmu_sc0006578.1_g000006 Rmu_sc0006730.1_g000010 Rmu_sc0006736.1_g000030 Rmu_sc0006736.1_g000033 Rmu_sc0007333.1_g000018 Rmu_sc0007856.1_g000010 Rmu_sc0008231.1_g000003 Rmu_sc0009862.1_g000012 Rmu_sc0010547.1_g000001 Rmu_sc0010547.1_g000003 Rmu_sc0010632.1_g000012 Rmu_sc0010747.1_g000008 Rmu_sc0011075.1_g000009 Rmu_sc0011565.1_g000004 Rmu_sc0011641.1_g000003 Rmu_sc0013102.1_g000013 Rmu_sc0013160.1_g000006 Rmu_sc0014846.1_g000004 Rmu_sc0017037.1_g000003 Rmu_sc0018203.1_g000001 Rmu_sc0018204.1_g000001 Rmu_sc0018348.1_g000001 Rmu_sc0019354.1_g000002 Rmu_sc0021630.1_g000002 Rmu_sc0022987.1_g000002 Rmu_sc0024469.1_g000005 Rmu_sc0033519.1_g000001 Rmu_sc0033519.1_g000002 Rmu_sc0033519.1_g000003 Rmu_sc0042775.1_g000001 Rmu_ssc0000110.1_g000003 Rmu_ssc0000110.1_g000004 Rmu_ssc0000126.1_g000068 Rmu_ssc0000200.1_g000007 Rmu_ssc0000295.1_g000003 Rmu_ssc0000295.1_g000004 Rmu_ssc0000299.1_g000010 Rmu_ssc0000308.1_g000024 Rmu_ssc0000339.1_g000006 Rmu_ssc0000385.1_g000012 Rmu_ssc0000409.1_g000004 Rmu_ssc0000421.1_g000004
rosa_roxburghii Rroxscaffold_156G00440360 Rroxscaffold_166G00440800 Rroxscaffold_1G00039040 Rroxscaffold_1G00039050 Rroxscaffold_1G00073950 Rroxscaffold_2G00091710 Rroxscaffold_2G00120050 Rroxscaffold_2G00122590 Rroxscaffold_3G00219700 Rroxscaffold_3G00264140 Rroxscaffold_4G00290600 Rroxscaffold_4G00323610 Rroxscaffold_4G00328460 Rroxscaffold_5G00343440 Rroxscaffold_5G00343570 Rroxscaffold_5G00378540 Rroxscaffold_5G00385090 Rroxscaffold_7G00169130 Rroxscaffold_7G00216420
rosa_rugosa Rorug01G0065800 Rorug01G0073500 Rorug01G0091700 Rorug01G0096500 Rorug01G0204700.1 Rorug01G0249100 Rorug01G0333800 Rorug01G0333900 Rorug01G0339500 Rorug01G0431300 Rorug02G0085400 Rorug02G0117500 Rorug02G0130900 Rorug02G0178800 Rorug02G0226700 Rorug02G0336300 Rorug02G0338700 Rorug02G0351400 Rorug02G0459900 Rorug03G0187000 Rorug03G0223700 Rorug03G0291300 Rorug03G0291300 Rorug03G0311100 Rorug03G0316900 Rorug03G0346000 Rorug04G0014500 Rorug04G0014600 Rorug04G0124100 Rorug04G0136500 Rorug04G0302000 Rorug04G0338100 Rorug04G0338200 Rorug04G0413100 Rorug05G0182200 Rorug05G0226500 Rorug05G0273300 Rorug05G0292200 Rorug05G0292200 Rorug05G0392500 Rorug05G0394500 Rorug05G0394600 Rorug05G0505600.1 Rorug06G0351400 Rorug06G0393400 Rorug06G0393600 Rorug06G0470000 Rorug07G0063100 Rorug07G0086800 Rorug07G0109200 Rorug07G0236100
rosa_samantha Rh1AG010800 Rh1AG011100 Rh1AG064900 Rh1AG088000 Rh1AG207100 Rh1AG262000 Rh1AG300800 Rh1BG043000 Rh1BG144600 Rh1BG180700 Rh1BG180800 Rh1BG328800 Rh1BG399400 Rh1CG041400 Rh1CG047300 Rh1CG379700 Rh1DG036500 Rh1DG083000 Rh1DG210700 Rh1DG210800 Rh1DG231100 Rh2AG007900 Rh2AG055500 Rh2AG339100 Rh2AG368100 Rh2BG243300 Rh2BG258900 Rh2BG292000 Rh2BG333500 Rh2BG387300 Rh2BG612800 Rh2BG619100 Rh2CG026500 Rh2CG163600 Rh2CG535700 Rh2DG186400 Rh2DG235000 Rh2DG314500 Rh2DG388500 Rh2DG391400 Rh2DG496900 Rh2DG526700 Rh2DG570700 Rh3AG330700 Rh3BG266900 Rh3CG236000 Rh3CG340400 Rh3DG090000 Rh3DG278400 Rh3DG297600 Rh3DG362600 Rh4AG001300 Rh4AG023300 Rh4AG097100 Rh4AG427000 Rh4BG029400 Rh4BG032400 Rh4BG086000 Rh4BG249200 Rh4CG001900 Rh4CG040600 Rh4CG093000 Rh4CG106300 Rh4CG113200 Rh4CG113900 Rh4DG002300 Rh4DG144400 Rh4DG234200 Rh5AG043700 Rh5AG084900 Rh5AG161500 Rh5AG409000 Rh5AG457200 Rh5AG457900 Rh5AG473700 Rh5AG520600 Rh5BG042100 Rh5BG124100 Rh5BG323500 Rh5BG417200 Rh5BG443700 Rh5BG451500 Rh5BG464900 Rh5BG470400 Rh5BG522500 Rh5CG068800 Rh5CG178300 Rh5CG231000 Rh5CG258600 Rh5CG394500 Rh5CG473700 Rh5DG164700 Rh5DG235400 Rh5DG261300 Rh5DG304900 Rh5DG334500 Rh5DG424300 Rh5DG458400 Rh5DG478600 Rh5DG552300 Rh5DG552700 Rh6AG037000 Rh6AG042100 Rh6AG255500 Rh6AG283400 Rh6AG291800 Rh6BG049600 Rh6BG080700 Rh6BG114600 Rh6BG128900 Rh6BG352500 Rh6CG052400 Rh6CG112900 Rh6CG113000 Rh6CG131300 Rh6CG157700 Rh6CG243200 Rh6CG254100 Rh6CG275700 Rh6CG299700 Rh6CG309100 Rh6CG317600 Rh6CG342600 Rh6CG471900 Rh6DG038200 Rh6DG102300 Rh6DG114400 Rh6DG225900 Rh6DG292900 Rh6DG320700 Rh6DG512800 Rh7AG217700 Rh7AG313900 Rh7AG446000 Rh7AG472600 Rh7BG223100 Rh7BG349900 Rh7BG352000 Rh7CG160200 Rh7CG233900 Rh7CG242700 Rh7CG273900 Rh7CG306400 Rh7CG322200 Rh7DG053800 Rh7DG077800 Rh7DG227700 Rh7DG404800
rosa_wichuraiana Rw0G003990 Rw2G022110 Rw2G024890 Rw6G005700 Rw7G008770

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 15
Acc36I ACCTGC 1 cut(s) 105
AccBSI CCGCTC 1 cut(s) 278
AccI GTMKAC 1 cut(s) 9
AccII CGCG 3 cut(s) 497, 521, 936
AciI CCGC 9 cut(s) 5, 26, 65, 74, 276, 485, 497, 521, 934
AclI AACGTT 1 cut(s) 334
AcsI RAATTY 2 cut(s) 184, 791
AcuI CTGAAG 1 cut(s) 165
AcyI GRCGYC 2 cut(s) 12, 23
AfaI GTAC 3 cut(s) 581, 948, 1036
AfeI AGCGCT 1 cut(s) 660
AfiI CCNNNNNNNGG 6 cut(s) 64, 112, 288, 289, 867, 898
AgsI TTSAA 1 cut(s) 842
AjiI CACGTC 1 cut(s) 884
AjnI CCWGG 2 cut(s) 225, 628
AloI GAACNNNNNNTCC 2 cut(s) 141, 173
AluBI AGCT 4 cut(s) 605, 668, 675, 905
AluI AGCT 4 cut(s) 605, 668, 675, 905
Alw26I GTCTC 2 cut(s) 19, 441
Aor51HI AGCGCT 1 cut(s) 660
AoxI GGCC 1 cut(s) 256
ApeKI GCWGC 7 cut(s) 50, 304, 569, 661, 668, 695, 887
ApoI RAATTY 2 cut(s) 184, 791
AspLEI GCGC 2 cut(s) 661, 938
AspS9I GGNCC 2 cut(s) 229, 523
AsuC2I CCSGG 2 cut(s) 868, 985
AsuHPI GGTGA 1 cut(s) 800
AvaII GGWCC 2 cut(s) 229, 523
BauI CACGAG 1 cut(s) 637
BbvI GCAGC 7 cut(s) 37, 291, 556, 648, 655, 707, 874
BccI CCATC 3 cut(s) 520, 743, 883
BciT130I CCWGG 2 cut(s) 227, 630
BcnI CCSGG 2 cut(s) 868, 985
BcoDI GTCTC 2 cut(s) 19, 441
BfaI CTAG 3 cut(s) 260, 863, 906
BfmI CTRYAG 1 cut(s) 827
BfoI RGCGCY 1 cut(s) 662
BfuAI ACCTGC 1 cut(s) 105
Bme1390I CCNGG 4 cut(s) 227, 630, 868, 985
Bme18I GGWCC 2 cut(s) 229, 523
BmgBI CACGTC 1 cut(s) 884
BmgT120I GGNCC 2 cut(s) 229, 523
BmiI GGNNCC 1 cut(s) 591
BmrFI CCNGG 4 cut(s) 227, 630, 868, 985
BmsI GCATC 5 cut(s) 62, 164, 630, 747, 970
BpmI CTGGAG 3 cut(s) 331, 595, 783
BpuMI CCSGG 2 cut(s) 868, 985
Bsa29I ATCGAT 1 cut(s) 978
BsaBI GATNNNNATC 1 cut(s) 137
BsaHI GRCGYC 2 cut(s) 12, 23
BsaJI CCNNGG 6 cut(s) 160, 283, 318, 409, 628, 897
BsaWI WCCGGW 2 cut(s) 562, 688
Bsc4I CCNNNNNNNGG 6 cut(s) 64, 112, 288, 289, 867, 898
Bse1I ACTGG 3 cut(s) 348, 558, 800
Bse8I GATNNNNATC 1 cut(s) 137
BseBI CCWGG 2 cut(s) 227, 630
BseCI ATCGAT 1 cut(s) 978
BseDI CCNNGG 6 cut(s) 160, 283, 318, 409, 628, 897
BseGI GGATG 3 cut(s) 53, 376, 621
BseJI GATNNNNATC 1 cut(s) 137
BseLI CCNNNNNNNGG 6 cut(s) 64, 112, 288, 289, 867, 898
BseMII CTCAG 3 cut(s) 50, 105, 558
BseNI ACTGG 3 cut(s) 348, 558, 800
BseRI GAGGAG 2 cut(s) 131, 498
BseXI GCAGC 7 cut(s) 37, 291, 556, 648, 655, 707, 874
Bsh1236I CGCG 3 cut(s) 497, 521, 936
Bsh1285I CGRYCG 1 cut(s) 9
BshFI GGCC 1 cut(s) 258
BshVI ATCGAT 1 cut(s) 978
BsiEI CGRYCG 1 cut(s) 9
BsiSI CCGG 5 cut(s) 563, 587, 689, 868, 984
BslFI GGGAC 1 cut(s) 955
BslI CCNNNNNNNGG 6 cut(s) 64, 112, 288, 289, 867, 898
BsmAI GTCTC 2 cut(s) 19, 441
BsmBI CGTCTC 1 cut(s) 19
BsmFI GGGAC 1 cut(s) 955
BsnI GGCC 1 cut(s) 258
Bsp143I GATC 3 cut(s) 401, 529, 990
Bsp19I CCATGG 1 cut(s) 318
BspACI CCGC 9 cut(s) 5, 26, 65, 74, 276, 485, 497, 521, 934
BspANI GGCC 1 cut(s) 258
BspCNI CTCAG 3 cut(s) 51, 104, 557
BspDI ATCGAT 1 cut(s) 978
BspFNI CGCG 3 cut(s) 497, 521, 936
BspLI GGNNCC 1 cut(s) 591
BspMAI CTGCAG 1 cut(s) 831
BspMI ACCTGC 1 cut(s) 105
BsrBI CCGCTC 1 cut(s) 278
BsrI ACTGG 3 cut(s) 348, 558, 800
BssECI CCNNGG 6 cut(s) 160, 283, 318, 409, 628, 897
BssMI GATC 3 cut(s) 401, 529, 990
BssNI GRCGYC 2 cut(s) 12, 23
BssSI CACGAG 1 cut(s) 637
BssT1I CCWWGG 3 cut(s) 283, 318, 897
Bst2BI CACGAG 1 cut(s) 637
Bst2UI CCWGG 2 cut(s) 227, 630
Bst6I CTCTTC 1 cut(s) 777
BstACI GRCGYC 2 cut(s) 12, 23
BstC8I GCNNGC 4 cut(s) 102, 489, 666, 673
BstDEI CTNAG 4 cut(s) 59, 91, 544, 655
BstDSI CCRYGG 2 cut(s) 318, 409
BstENI CCTNNNNNAGG 1 cut(s) 896
BstF5I GGATG 3 cut(s) 53, 376, 621
BstFNI CGCG 3 cut(s) 497, 521, 936
BstH2I RGCGCY 1 cut(s) 662
BstHHI GCGC 2 cut(s) 661, 938
BstKTI GATC 3 cut(s) 404, 532, 993
BstMAI GTCTC 2 cut(s) 19, 441
BstMBI GATC 3 cut(s) 401, 529, 990
BstMCI CGRYCG 1 cut(s) 9
BstMWI GCNNNNNNNGC 1 cut(s) 665
BstNI CCWGG 2 cut(s) 227, 630
BstNSI RCATGY 2 cut(s) 331, 491
BstSCI CCNGG 4 cut(s) 225, 628, 866, 983
BstSFI CTRYAG 1 cut(s) 827
BstUI CGCG 3 cut(s) 497, 521, 936
BstV1I GCAGC 7 cut(s) 37, 291, 556, 648, 655, 707, 874
BstXI CCANNNNNNTGG 1 cut(s) 565
Bsu15I ATCGAT 1 cut(s) 978
BsuRI GGCC 1 cut(s) 258
BsuTUI ATCGAT 1 cut(s) 978
BtgI CCRYGG 2 cut(s) 318, 409
BtrI CACGTC 1 cut(s) 884
BtsCI GGATG 3 cut(s) 53, 376, 621
BtsI GCAGTG 1 cut(s) 951
BtsIMutI CAGTG 2 cut(s) 355, 951
BveI ACCTGC 1 cut(s) 105
Cac8I GCNNGC 4 cut(s) 102, 489, 666, 673
CfoI GCGC 2 cut(s) 661, 938
Cfr13I GGNCC 2 cut(s) 229, 523
ClaI ATCGAT 1 cut(s) 978
CseI GACGC 3 cut(s) 31, 503, 527
CsiI ACCWGGT 1 cut(s) 225
Csp6I GTAC 3 cut(s) 580, 947, 1035
CviAII CATG 7 cut(s) 221, 301, 319, 328, 488, 550, 957
CviQI GTAC 3 cut(s) 580, 947, 1035
DdeI CTNAG 4 cut(s) 59, 91, 544, 655
DpnI GATC 3 cut(s) 403, 531, 992
DpnII GATC 3 cut(s) 401, 529, 990
DraI TTTAAA 1 cut(s) 313
Eam1104I CTCTTC 1 cut(s) 777
EarI CTCTTC 1 cut(s) 777
Eco130I CCWWGG 3 cut(s) 283, 318, 897
Eco47I GGWCC 2 cut(s) 229, 523
Eco47III AGCGCT 1 cut(s) 660
Eco57I CTGAAG 1 cut(s) 165
EcoNI CCTNNNNNAGG 1 cut(s) 896
EcoRI GAATTC 1 cut(s) 791
EcoRII CCWGG 2 cut(s) 225, 628
EcoT14I CCWWGG 3 cut(s) 283, 318, 897
EcoT22I ATGCAT 1 cut(s) 249
ErhI CCWWGG 3 cut(s) 283, 318, 897
Esp3I CGTCTC 1 cut(s) 19
FaeI CATG 7 cut(s) 224, 304, 322, 331, 491, 553, 960
FaqI GGGAC 1 cut(s) 955
FatI CATG 7 cut(s) 220, 300, 318, 327, 487, 549, 956
FauNDI CATATG 1 cut(s) 46
FblI GTMKAC 1 cut(s) 9
FokI GGATG 3 cut(s) 40, 383, 608
FspBI CTAG 3 cut(s) 260, 863, 906
GlaI GCGC 2 cut(s) 660, 937
GsuI CTGGAG 3 cut(s) 331, 595, 783
HaeII RGCGCY 1 cut(s) 662
HaeIII GGCC 1 cut(s) 258
HapII CCGG 5 cut(s) 563, 587, 689, 868, 984
HgaI GACGC 3 cut(s) 31, 503, 527
HhaI GCGC 2 cut(s) 661, 938
Hin1I GRCGYC 2 cut(s) 12, 23
Hin1II CATG 7 cut(s) 224, 304, 322, 331, 491, 553, 960
Hin6I GCGC 2 cut(s) 659, 936
HinP1I GCGC 2 cut(s) 659, 936
HincII GTYRAC 2 cut(s) 10, 502
HindII GTYRAC 2 cut(s) 10, 502
HinfI GANTC 4 cut(s) 138, 364, 481, 608
HpaII CCGG 5 cut(s) 563, 587, 689, 868, 984
HphI GGTGA 1 cut(s) 800
Hpy166II GTNNAC 8 cut(s) 10, 111, 325, 502, 526, 949, 1016, 1035
Hpy188I TCNGA 6 cut(s) 94, 145, 161, 517, 745, 769
Hpy188III TCNNGA 4 cut(s) 368, 637, 779, 879
Hpy8I GTNNAC 8 cut(s) 10, 111, 325, 502, 526, 949, 1016, 1035
Hpy99I CGWCG 3 cut(s) 14, 25, 580
HpyAV CCTTC 4 cut(s) 282, 381, 593, 920
HpyCH4IV ACGT 4 cut(s) 12, 334, 575, 883
HpyF10VI GCNNNNNNNGC 1 cut(s) 665
HpyF3I CTNAG 4 cut(s) 59, 91, 544, 655
HpySE526I ACGT 4 cut(s) 12, 334, 575, 883
Hsp92I GRCGYC 2 cut(s) 12, 23
Hsp92II CATG 7 cut(s) 224, 304, 322, 331, 491, 553, 960
HspAI GCGC 2 cut(s) 659, 936
Kzo9I GATC 3 cut(s) 401, 529, 990
LmnI GCTCC 4 cut(s) 283, 350, 595, 902
Lsp1109I GCAGC 7 cut(s) 37, 291, 556, 648, 655, 707, 874
LweI GCATC 5 cut(s) 62, 164, 630, 747, 970
MabI ACCWGGT 1 cut(s) 225
MaeI CTAG 3 cut(s) 260, 863, 906
MaeII ACGT 4 cut(s) 12, 334, 575, 883
MalI GATC 3 cut(s) 403, 531, 992
MbiI CCGCTC 1 cut(s) 278
MboI GATC 3 cut(s) 401, 529, 990
MboII GAAGA 6 cut(s) 158, 195, 289, 758, 794, 865
MluCI AATT 5 cut(s) 184, 265, 308, 375, 791
MlyI GAGTC 3 cut(s) 373, 475, 602
MmeI TCCRAC 2 cut(s) 256, 738
Mph1103I ATGCAT 1 cut(s) 249
MseI TTAA 2 cut(s) 312, 1002
MspA1I CMGCKG 1 cut(s) 668
MspI CCGG 5 cut(s) 563, 587, 689, 868, 984
MspR9I CCNGG 4 cut(s) 227, 630, 868, 985
MvaI CCWGG 2 cut(s) 227, 630
MvnI CGCG 3 cut(s) 497, 521, 936
MwoI GCNNNNNNNGC 1 cut(s) 665
NciI CCSGG 2 cut(s) 868, 985
NcoI CCATGG 1 cut(s) 318
NdeI CATATG 1 cut(s) 46
NdeII GATC 3 cut(s) 401, 529, 990
NlaIII CATG 7 cut(s) 224, 304, 322, 331, 491, 553, 960
NlaIV GGNNCC 1 cut(s) 591
NsiI ATGCAT 1 cut(s) 249
NspI RCATGY 2 cut(s) 331, 491
PaeI GCATGC 1 cut(s) 491
PcsI WCGNNNNNNNCGW 1 cut(s) 525
PfeI GAWTC 1 cut(s) 138
PflFI GACNNNGTC 3 cut(s) 227, 497, 521
PleI GAGTC 3 cut(s) 372, 475, 602
PpsI GAGTC 3 cut(s) 372, 475, 602
Psp1406I AACGTT 1 cut(s) 334
Psp6I CCWGG 2 cut(s) 225, 628
PspGI CCWGG 2 cut(s) 225, 628
PspN4I GGNNCC 1 cut(s) 591
PspPI GGNCC 2 cut(s) 229, 523
PstI CTGCAG 1 cut(s) 831
PsyI GACNNNGTC 3 cut(s) 227, 497, 521
PvuII CAGCTG 1 cut(s) 668
RsaI GTAC 3 cut(s) 581, 948, 1036
RsaNI GTAC 3 cut(s) 580, 947, 1035
SalI GTCGAC 1 cut(s) 8
SaqAI TTAA 2 cut(s) 312, 1002
Sau3AI GATC 3 cut(s) 401, 529, 990
Sau96I GGNCC 2 cut(s) 229, 523
SchI GAGTC 3 cut(s) 373, 475, 602
ScrFI CCNGG 4 cut(s) 227, 630, 868, 985
SexAI ACCWGGT 1 cut(s) 225
SfaNI GCATC 5 cut(s) 62, 164, 630, 747, 970
SfcI CTRYAG 1 cut(s) 827
SinI GGWCC 2 cut(s) 229, 523
SphI GCATGC 1 cut(s) 491
Sse9I AATT 5 cut(s) 184, 265, 308, 375, 791
SsiI CCGC 9 cut(s) 5, 26, 65, 74, 276, 485, 497, 521, 934
SspMI CTAG 3 cut(s) 260, 863, 906
StyD4I CCNGG 4 cut(s) 225, 628, 866, 983
StyI CCWWGG 3 cut(s) 283, 318, 897
TaiI ACGT 4 cut(s) 15, 337, 578, 886
TaqI TCGA 4 cut(s) 9, 131, 978, 993
TasI AATT 5 cut(s) 184, 265, 308, 375, 791
TatI WGTACW 1 cut(s) 1034
TauI GCSGC 3 cut(s) 28, 68, 278
TfiI GAWTC 1 cut(s) 138
Tru1I TTAA 2 cut(s) 312, 1002
Tru9I TTAA 2 cut(s) 312, 1002
TscAI CASTG 2 cut(s) 355, 958
TseI GCWGC 7 cut(s) 50, 304, 569, 661, 668, 695, 887
TspDTI ATGAA 3 cut(s) 289, 443, 710
TspGWI ACGGA 2 cut(s) 128, 426
TspRI CASTG 2 cut(s) 355, 958
Tth111I GACNNNGTC 3 cut(s) 227, 497, 521
VpaK11BI GGWCC 2 cut(s) 229, 523
XagI CCTNNNNNAGG 1 cut(s) 896
XapI RAATTY 2 cut(s) 184, 791
XceI RCATGY 2 cut(s) 331, 491
XmiI GTMKAC 1 cut(s) 9
XspI CTAG 3 cut(s) 260, 863, 906
ZraI GACGTC 1 cut(s) 13
Zsp2I ATGCAT 1 cut(s) 249
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.