Rmu_sc0005091.1_g000005

Domain of unknown function (DUF4283)

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0005091.1
Physical Location & Seq
Reverse (-)
14951 .. 16223
1273 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0005091.1_g000005.1.cds

Sequence Viewer

Length: 1173 bp
atgatttatgtcaggattagtgaggatttatattatgaacaattgaagaattttcgcactaatctcattggtagacttctacttcgtaaagggtcagttcctatgagaactgattctctgaaagtatctcttgcagctcaatggaaccctatgaacccatggcacttgggtcctttgggcaaaggtttctttgacattcatttcaatagtgaagatgacatgagaagaatttggagaagtggtacatgttcccttgctaatggaatattttggttattcgaatggaaaccagacttcaaaccaggtgttaaccttcctcaaacacatactcaagtgtggattcgaattttaggattaagccaggactattggcatcctcgccatctcatgaagattgcccgtggggtagggacaccattgcttattgataaagctacgaaagagcgtcaatttggttattatgcccgcatctcggttgatattgaactaagtcaagatctgccaacttctcttatgctggaaaaaggtagtcatgctttctctgtaggtattgcttatgagaaattgccatggcagtttaaggaacaagagaagccaagaggtcgctctcgtgatgaccatgctgagggtagtagaggtaaaaaagttcgtcaagaatataggatcaaggctactccaaatattgtctcacatgttgaacaaccaaaaactaagcttgcttctccagagaatgtccacattgaagataccattgagaataaggtatccacggagctatttaatccattggttgctcaaagcactgataataggcttgctttagttgatgcatctattgatgagattgggcctattgattcaaatgtgactgtgttggctggtccaagtgaaccatatgtggagagcatagctccaataggatctgcagtgaaacatagtgttcaaaagttttgttggggtgatttggaaaatgaagaacctcttggtcatataatttatgctcaatctaagatcaattatgaaacttggtttgatgagggtgaagcagctttagatgagaatacacttcgcgctctcccaaagtctcagcacaaaaaatctaaggcaaaatgtcaaacgagttcaaggtatcctgcacgtaatcggacacctacgatgcgtctcaacctttag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

390

Amino Acids

44.58

Weight (kDa)

8.88

Isoelectric Point (pI)

37.09

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000044)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G07760 AT5G28823
fragaria_vesca FvH4_1g13572 FvH4_2g03281 FvH4_2g04691 FvH4_2g08332 FvH4_2g08333 FvH4_2g15313 FvH4_2g26101 FvH4_2g29541 FvH4_3g06911 FvH4_3g34351 FvH4_3g43733 FvH4_4g02432 FvH4_4g05601 FvH4_4g08213 FvH4_4g09961 FvH4_4g10131 FvH4_4g20001 FvH4_4g20002 FvH4_5g01051 FvH4_5g01401 FvH4_5g27943 FvH4_6g09220 FvH4_6g17383 FvH4_6g35491 FvH4_6g46421 FvH4_7g04151 FvH4_7g13962 FvH4_7g18611 FvH4_7g19491 FvH4_7g19511 FvH4_7g26562
malus_domestica MD06G1221600.v1.1
pyrus_communis pycom10g21150
rosa_chinensis RchiOBHm_Chr1g0337571 RchiOBHm_Chr2g0168771 RchiOBHm_Chr3g0453631 RchiOBHm_Chr6g0278581
rosa_laevigata RLG00000001899 RLG00000001925 RLG00000002026 RLG00000003410 RLG00000003767 RLG00000004304 RLG00000004473 RLG00000004677 RLG00000006856 RLG00000007994 RLG00000009888 RLG00000011627 RLG00000012174 RLG00000012217 RLG00000013118 RLG00000013736 RLG00000014194 RLG00000014251 RLG00000015011 RLG00000015057 RLG00000015235 RLG00000017416 RLG00000018052 RLG00000018537 RLG00000019968 RLG00000020096 RLG00000020263 RLG00000022606 RLG00000023119 RLG00000028111 RLG00000029686 RLG00000030126 RLG00000031124 RLG00000031236 RLG00000032766 RLG00000033171 RLG00000033548 RLG00000033987 RLG00000034062 RLG00000035115 RLG00000035863
rosa_multiflora Rmu_co8036712.1_g000001 Rmu_co8080248.1_g000001 Rmu_co8208334.1_g000001 Rmu_co8253451.1_g000001 Rmu_co8393241.1_g000001 Rmu_co8522225.1_g000005 Rmu_sc0000060.1_g000030 Rmu_sc0000060.1_g000031 Rmu_sc0000060.1_g000032 Rmu_sc0000090.1_g000008 Rmu_sc0000149.1_g000051 Rmu_sc0000149.1_g000058 Rmu_sc0000309.1_g000050 Rmu_sc0000370.1_g000022 Rmu_sc0000370.1_g000023 Rmu_sc0000370.1_g000024 Rmu_sc0000418.1_g000018 Rmu_sc0000427.1_g000014 Rmu_sc0000427.1_g000015 Rmu_sc0000434.1_g000008 Rmu_sc0000487.1_g000038 Rmu_sc0000487.1_g000039 Rmu_sc0000569.1_g000029 Rmu_sc0000580.1_g000097 Rmu_sc0000595.1_g000068 Rmu_sc0000607.1_g000027 Rmu_sc0000738.1_g000004 Rmu_sc0000758.1_g000001 Rmu_sc0000758.1_g000002 Rmu_sc0000870.1_g000019 Rmu_sc0000924.1_g000040 Rmu_sc0000924.1_g000041 Rmu_sc0000999.1_g000037 Rmu_sc0001001.1_g000001 Rmu_sc0001010.1_g000080 Rmu_sc0001075.1_g000041 Rmu_sc0001097.1_g000016 Rmu_sc0001173.1_g000020 Rmu_sc0001258.1_g000010 Rmu_sc0001425.1_g000031 Rmu_sc0001493.1_g000020 Rmu_sc0001493.1_g000021 Rmu_sc0001644.1_g000024 Rmu_sc0001648.1_g000039 Rmu_sc0001662.1_g000002 Rmu_sc0001849.1_g000046 Rmu_sc0001851.1_g000038 Rmu_sc0001861.1_g000006 Rmu_sc0001899.1_g000008 Rmu_sc0002231.1_g000023 Rmu_sc0002393.1_g000012 Rmu_sc0002515.1_g000010 Rmu_sc0002551.1_g000013 Rmu_sc0002680.1_g000029 Rmu_sc0002700.1_g000030 Rmu_sc0002700.1_g000031 Rmu_sc0002709.1_g000035 Rmu_sc0002779.1_g000017 Rmu_sc0003267.1_g000040 Rmu_sc0003306.1_g000009 Rmu_sc0003338.1_g000014 Rmu_sc0003522.1_g000038 Rmu_sc0003522.1_g000039 Rmu_sc0003653.1_g000031 Rmu_sc0003901.1_g000003 Rmu_sc0003920.1_g000009 Rmu_sc0004014.1_g000009 Rmu_sc0004016.1_g000013 Rmu_sc0004031.1_g000002 Rmu_sc0004106.1_g000001 Rmu_sc0004432.1_g000004 Rmu_sc0004481.1_g000020 Rmu_sc0004874.1_g000005 Rmu_sc0004928.1_g000005 Rmu_sc0005065.1_g000053 Rmu_sc0005091.1_g000005 Rmu_sc0005217.1_g000015 Rmu_sc0005242.1_g000002 Rmu_sc0005300.1_g000011 Rmu_sc0005400.1_g000004 Rmu_sc0005486.1_g000007 Rmu_sc0005527.1_g000015 Rmu_sc0006059.1_g000021 Rmu_sc0006087.1_g000004 Rmu_sc0006184.1_g000006 Rmu_sc0006184.1_g000007 Rmu_sc0006578.1_g000006 Rmu_sc0006730.1_g000010 Rmu_sc0006736.1_g000030 Rmu_sc0006736.1_g000033 Rmu_sc0007333.1_g000018 Rmu_sc0007856.1_g000010 Rmu_sc0008231.1_g000003 Rmu_sc0009862.1_g000012 Rmu_sc0010547.1_g000001 Rmu_sc0010547.1_g000003 Rmu_sc0010632.1_g000012 Rmu_sc0010747.1_g000008 Rmu_sc0011075.1_g000009 Rmu_sc0011565.1_g000004 Rmu_sc0011641.1_g000003 Rmu_sc0013102.1_g000013 Rmu_sc0013160.1_g000006 Rmu_sc0014846.1_g000004 Rmu_sc0017037.1_g000003 Rmu_sc0018203.1_g000001 Rmu_sc0018204.1_g000001 Rmu_sc0018348.1_g000001 Rmu_sc0019354.1_g000002 Rmu_sc0021630.1_g000002 Rmu_sc0022987.1_g000002 Rmu_sc0024469.1_g000005 Rmu_sc0033519.1_g000001 Rmu_sc0033519.1_g000002 Rmu_sc0033519.1_g000003 Rmu_sc0042775.1_g000001 Rmu_ssc0000110.1_g000003 Rmu_ssc0000110.1_g000004 Rmu_ssc0000126.1_g000068 Rmu_ssc0000200.1_g000007 Rmu_ssc0000295.1_g000003 Rmu_ssc0000295.1_g000004 Rmu_ssc0000299.1_g000010 Rmu_ssc0000308.1_g000024 Rmu_ssc0000339.1_g000006 Rmu_ssc0000385.1_g000012 Rmu_ssc0000409.1_g000004 Rmu_ssc0000421.1_g000004
rosa_roxburghii Rroxscaffold_156G00440360 Rroxscaffold_166G00440800 Rroxscaffold_1G00039040 Rroxscaffold_1G00039050 Rroxscaffold_1G00073950 Rroxscaffold_2G00091710 Rroxscaffold_2G00120050 Rroxscaffold_2G00122590 Rroxscaffold_3G00219700 Rroxscaffold_3G00264140 Rroxscaffold_4G00290600 Rroxscaffold_4G00323610 Rroxscaffold_4G00328460 Rroxscaffold_5G00343440 Rroxscaffold_5G00343570 Rroxscaffold_5G00378540 Rroxscaffold_5G00385090 Rroxscaffold_7G00169130 Rroxscaffold_7G00216420
rosa_rugosa Rorug01G0065800 Rorug01G0073500 Rorug01G0091700 Rorug01G0096500 Rorug01G0204700.1 Rorug01G0249100 Rorug01G0333800 Rorug01G0333900 Rorug01G0339500 Rorug01G0431300 Rorug02G0085400 Rorug02G0117500 Rorug02G0130900 Rorug02G0178800 Rorug02G0226700 Rorug02G0336300 Rorug02G0338700 Rorug02G0351400 Rorug02G0459900 Rorug03G0187000 Rorug03G0223700 Rorug03G0291300 Rorug03G0291300 Rorug03G0311100 Rorug03G0316900 Rorug03G0346000 Rorug04G0014500 Rorug04G0014600 Rorug04G0124100 Rorug04G0136500 Rorug04G0302000 Rorug04G0338100 Rorug04G0338200 Rorug04G0413100 Rorug05G0182200 Rorug05G0226500 Rorug05G0273300 Rorug05G0292200 Rorug05G0292200 Rorug05G0392500 Rorug05G0394500 Rorug05G0394600 Rorug05G0505600.1 Rorug06G0351400 Rorug06G0393400 Rorug06G0393600 Rorug06G0470000 Rorug07G0063100 Rorug07G0086800 Rorug07G0109200 Rorug07G0236100
rosa_samantha Rh1AG010800 Rh1AG011100 Rh1AG064900 Rh1AG088000 Rh1AG207100 Rh1AG262000 Rh1AG300800 Rh1BG043000 Rh1BG144600 Rh1BG180700 Rh1BG180800 Rh1BG328800 Rh1BG399400 Rh1CG041400 Rh1CG047300 Rh1CG379700 Rh1DG036500 Rh1DG083000 Rh1DG210700 Rh1DG210800 Rh1DG231100 Rh2AG007900 Rh2AG055500 Rh2AG339100 Rh2AG368100 Rh2BG243300 Rh2BG258900 Rh2BG292000 Rh2BG333500 Rh2BG387300 Rh2BG612800 Rh2BG619100 Rh2CG026500 Rh2CG163600 Rh2CG535700 Rh2DG186400 Rh2DG235000 Rh2DG314500 Rh2DG388500 Rh2DG391400 Rh2DG496900 Rh2DG526700 Rh2DG570700 Rh3AG330700 Rh3BG266900 Rh3CG236000 Rh3CG340400 Rh3DG090000 Rh3DG278400 Rh3DG297600 Rh3DG362600 Rh4AG001300 Rh4AG023300 Rh4AG097100 Rh4AG427000 Rh4BG029400 Rh4BG032400 Rh4BG086000 Rh4BG249200 Rh4CG001900 Rh4CG040600 Rh4CG093000 Rh4CG106300 Rh4CG113200 Rh4CG113900 Rh4DG002300 Rh4DG144400 Rh4DG234200 Rh5AG043700 Rh5AG084900 Rh5AG161500 Rh5AG409000 Rh5AG457200 Rh5AG457900 Rh5AG473700 Rh5AG520600 Rh5BG042100 Rh5BG124100 Rh5BG323500 Rh5BG417200 Rh5BG443700 Rh5BG451500 Rh5BG464900 Rh5BG470400 Rh5BG522500 Rh5CG068800 Rh5CG178300 Rh5CG231000 Rh5CG258600 Rh5CG394500 Rh5CG473700 Rh5DG164700 Rh5DG235400 Rh5DG261300 Rh5DG304900 Rh5DG334500 Rh5DG424300 Rh5DG458400 Rh5DG478600 Rh5DG552300 Rh5DG552700 Rh6AG037000 Rh6AG042100 Rh6AG255500 Rh6AG283400 Rh6AG291800 Rh6BG049600 Rh6BG080700 Rh6BG114600 Rh6BG128900 Rh6BG352500 Rh6CG052400 Rh6CG112900 Rh6CG113000 Rh6CG131300 Rh6CG157700 Rh6CG243200 Rh6CG254100 Rh6CG275700 Rh6CG299700 Rh6CG309100 Rh6CG317600 Rh6CG342600 Rh6CG471900 Rh6DG038200 Rh6DG102300 Rh6DG114400 Rh6DG225900 Rh6DG292900 Rh6DG320700 Rh6DG512800 Rh7AG217700 Rh7AG313900 Rh7AG446000 Rh7AG472600 Rh7BG223100 Rh7BG349900 Rh7BG352000 Rh7CG160200 Rh7CG233900 Rh7CG242700 Rh7CG273900 Rh7CG306400 Rh7CG322200 Rh7DG053800 Rh7DG077800 Rh7DG227700 Rh7DG404800
rosa_wichuraiana Rw0G003990 Rw2G022110 Rw2G024890 Rw6G005700 Rw7G008770

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 73
AccII CGCG 1 cut(s) 1071
AciI CCGC 1 cut(s) 466
AclWI GGATC 2 cut(s) 671, 928
AcsI RAATTY 3 cut(s) 49, 228, 345
AfaI GTAC 1 cut(s) 244
AfiI CCNNNNNNNGG 2 cut(s) 472, 625
AflIII ACRYGT 2 cut(s) 245, 691
AgsI TTSAA 9 cut(s) 46, 205, 298, 485, 698, 743, 861, 944, 1125
AjnI CCWGG 2 cut(s) 301, 360
AjuI GAANNNNNNNTTGG 2 cut(s) 966, 998
AluBI AGCT 6 cut(s) 137, 434, 715, 775, 911, 1049
AluI AGCT 6 cut(s) 137, 434, 715, 775, 911, 1049
Alw26I GTCTC 3 cut(s) 691, 1089, 1166
AlwI GGATC 2 cut(s) 671, 928
AoxI GGCC 1 cut(s) 848
ApeKI GCWGC 2 cut(s) 134, 1046
ApoI RAATTY 3 cut(s) 49, 228, 345
ArsI GACNNNNNNTTYG 2 cut(s) 66, 98
Asp700I GAANNNNTTC 1 cut(s) 112
AspLEI GCGC 1 cut(s) 1073
AspS9I GGNCC 3 cut(s) 170, 848, 881
AsuHPI GGTGA 2 cut(s) 971, 1052
AsuII TTCGAA 2 cut(s) 279, 343
AvaII GGWCC 2 cut(s) 170, 881
BauI CACGAG 1 cut(s) 609
BbvCI CCTCAGC 1 cut(s) 624
BbvI GCAGC 2 cut(s) 146, 1058
BccI CCATC 1 cut(s) 390
BciT130I CCWGG 2 cut(s) 303, 362
BciVI GTATCC 2 cut(s) 775, 1140
BcoDI GTCTC 3 cut(s) 691, 1089, 1166
BfmI CTRYAG 2 cut(s) 543, 924
BfuI GTATCC 2 cut(s) 775, 1140
BglII AGATCT 1 cut(s) 496
BisI GCNGC 2 cut(s) 135, 1047
BlsI GCNGC 2 cut(s) 136, 1048
Bme1390I CCNGG 2 cut(s) 303, 362
Bme18I GGWCC 2 cut(s) 170, 881
BmgT120I GGNCC 3 cut(s) 170, 848, 881
BmiI GGNNCC 2 cut(s) 146, 171
BmrFI CCNGG 2 cut(s) 303, 362
BmsI GCATC 5 cut(s) 382, 477, 817, 839, 1146
BplI GAGNNNNNCTC 2 cut(s) 895, 927
BpmI CTGGAG 1 cut(s) 708
Bpu10I CCTNAGC 1 cut(s) 624
Bpu14I TTCGAA 2 cut(s) 279, 343
BpuEI CTTGAG 1 cut(s) 315
BsaAI YACGTR 1 cut(s) 1139
BsaJI CCNNGG 4 cut(s) 158, 400, 569, 768
BsaXI ACNNNNNCTCC 2 cut(s) 226, 256
Bsc4I CCNNNNNNNGG 2 cut(s) 472, 625
Bse3DI GCAATG 1 cut(s) 416
BseBI CCWGG 2 cut(s) 303, 362
BseDI CCNNGG 4 cut(s) 158, 400, 569, 768
BseGI GGATG 1 cut(s) 373
BseLI CCNNNNNNNGG 2 cut(s) 472, 625
BseMI GCAATG 1 cut(s) 416
BseMII CTCAG 2 cut(s) 615, 1100
BseXI GCAGC 2 cut(s) 146, 1058
BsgI GTGCAG 1 cut(s) 1119
Bsh1236I CGCG 1 cut(s) 1071
BshFI GGCC 1 cut(s) 850
BslFI GGGAC 1 cut(s) 424
BslI CCNNNNNNNGG 2 cut(s) 472, 625
BsmAI GTCTC 3 cut(s) 691, 1089, 1166
BsmBI CGTCTC 1 cut(s) 1166
BsmFI GGGAC 1 cut(s) 424
BsnI GGCC 1 cut(s) 850
Bsp119I TTCGAA 2 cut(s) 279, 343
Bsp143I GATC 4 cut(s) 496, 663, 920, 1011
Bsp19I CCATGG 2 cut(s) 158, 569
BspACI CCGC 1 cut(s) 466
BspANI GGCC 1 cut(s) 850
BspCNI CTCAG 2 cut(s) 616, 1099
BspFNI CGCG 1 cut(s) 1071
BspHI TCATGA 1 cut(s) 387
BspLI GGNNCC 2 cut(s) 146, 171
BspMAI CTGCAG 1 cut(s) 928
BspPI GGATC 2 cut(s) 671, 928
BspT104I TTCGAA 2 cut(s) 279, 343
BsrDI GCAATG 1 cut(s) 416
BssECI CCNNGG 4 cut(s) 158, 400, 569, 768
BssMI GATC 4 cut(s) 496, 663, 920, 1011
BssSI CACGAG 1 cut(s) 609
BssT1I CCWWGG 2 cut(s) 158, 569
Bst2BI CACGAG 1 cut(s) 609
Bst2UI CCWGG 2 cut(s) 303, 362
Bst4CI ACNGT 1 cut(s) 871
BstBAI YACGTR 1 cut(s) 1139
BstBI TTCGAA 2 cut(s) 279, 343
BstC8I GCNNGC 3 cut(s) 466, 717, 816
BstDEI CTNAG 6 cut(s) 488, 624, 711, 1008, 1086, 1101
BstDSI CCRYGG 4 cut(s) 158, 400, 569, 768
BstF5I GGATG 1 cut(s) 373
BstFNI CGCG 1 cut(s) 1071
BstHHI GCGC 1 cut(s) 1073
BstKTI GATC 4 cut(s) 499, 666, 923, 1014
BstMAI GTCTC 3 cut(s) 691, 1089, 1166
BstMBI GATC 4 cut(s) 496, 663, 920, 1011
BstNI CCWGG 2 cut(s) 303, 362
BstNSI RCATGY 2 cut(s) 249, 695
BstSCI CCNGG 2 cut(s) 301, 360
BstSFI CTRYAG 2 cut(s) 543, 924
BstUI CGCG 1 cut(s) 1071
BstV1I GCAGC 2 cut(s) 146, 1058
BstX2I RGATCY 2 cut(s) 496, 920
BstYI RGATCY 2 cut(s) 496, 920
BsuI GTATCC 2 cut(s) 775, 1140
BsuRI GGCC 1 cut(s) 850
BtgI CCRYGG 4 cut(s) 158, 400, 569, 768
BtsCI GGATG 1 cut(s) 373
BtsI GCAGTG 1 cut(s) 933
BtsIMutI CAGTG 2 cut(s) 801, 933
Cac8I GCNNGC 3 cut(s) 466, 717, 816
CciI TCATGA 1 cut(s) 387
CfoI GCGC 1 cut(s) 1073
Cfr13I GGNCC 3 cut(s) 170, 848, 881
CseI GACGC 2 cut(s) 434, 1148
CsiI ACCWGGT 1 cut(s) 301
Csp6I GTAC 1 cut(s) 243
CviAII CATG 8 cut(s) 159, 220, 246, 388, 533, 570, 620, 692
CviQI GTAC 1 cut(s) 243
DdeI CTNAG 6 cut(s) 488, 624, 711, 1008, 1086, 1101
DpnI GATC 4 cut(s) 498, 665, 922, 1013
DpnII GATC 4 cut(s) 496, 663, 920, 1011
Eco130I CCWWGG 2 cut(s) 158, 569
Eco47I GGWCC 2 cut(s) 170, 881
EcoO109I RGGNCCY 1 cut(s) 170
EcoRII CCWGG 2 cut(s) 301, 360
EcoT14I CCWWGG 2 cut(s) 158, 569
EcoT22I ATGCAT 1 cut(s) 832
ErhI CCWWGG 2 cut(s) 158, 569
Esp3I CGTCTC 1 cut(s) 1166
FaeI CATG 8 cut(s) 162, 223, 249, 391, 536, 573, 623, 695
FalI AAGNNNNNCTT 4 cut(s) 114, 146, 966, 998
FaqI GGGAC 1 cut(s) 424
FatI CATG 8 cut(s) 158, 219, 245, 387, 532, 569, 619, 691
FauI CCCGC 1 cut(s) 473
FauNDI CATATG 1 cut(s) 895
FblI GTMKAC 1 cut(s) 73
Fnu4HI GCNGC 2 cut(s) 135, 1047
FokI GGATG 1 cut(s) 360
Fsp4HI GCNGC 2 cut(s) 135, 1047
GlaI GCGC 1 cut(s) 1072
GluI GCNGC 2 cut(s) 135, 1047
GsuI CTGGAG 1 cut(s) 708
HaeIII GGCC 1 cut(s) 850
HgaI GACGC 2 cut(s) 434, 1148
HhaI GCGC 1 cut(s) 1073
Hin1II CATG 8 cut(s) 162, 223, 249, 391, 536, 573, 623, 695
Hin6I GCGC 1 cut(s) 1071
HinP1I GCGC 1 cut(s) 1071
HincII GTYRAC 1 cut(s) 310
HindII GTYRAC 1 cut(s) 310
HindIII AAGCTT 1 cut(s) 713
HinfI GANTC 3 cut(s) 113, 340, 857
HpaI GTTAAC 1 cut(s) 310
HphI GGTGA 2 cut(s) 971, 1052
Hpy166II GTNNAC 4 cut(s) 74, 310, 736, 890
Hpy188I TCNGA 2 cut(s) 120, 1146
Hpy188III TCNNGA 6 cut(s) 13, 388, 494, 611, 653, 725
Hpy8I GTNNAC 4 cut(s) 74, 310, 736, 890
HpyAV CCTTC 1 cut(s) 323
HpyCH4III ACNGT 1 cut(s) 871
HpyCH4IV ACGT 1 cut(s) 1138
HpyCH4V TGCA 4 cut(s) 134, 830, 926, 1136
HpyF3I CTNAG 6 cut(s) 488, 624, 711, 1008, 1086, 1101
HpySE526I ACGT 1 cut(s) 1138
Hsp92II CATG 8 cut(s) 162, 223, 249, 391, 536, 573, 623, 695
HspAI GCGC 1 cut(s) 1071
KspAI GTTAAC 1 cut(s) 310
Kzo9I GATC 4 cut(s) 496, 663, 920, 1011
LmnI GCTCC 2 cut(s) 772, 916
LpnPI CCDG 9 cut(s) 288, 303, 315, 347, 374, 503, 738, 864, 1146
Lsp1109I GCAGC 2 cut(s) 146, 1058
LweI GCATC 5 cut(s) 382, 477, 817, 839, 1146
MabI ACCWGGT 1 cut(s) 301
MaeII ACGT 1 cut(s) 1138
MaeIII GTNAC 1 cut(s) 865
MalI GATC 4 cut(s) 498, 665, 922, 1013
MboI GATC 4 cut(s) 496, 663, 920, 1011
MboII GAAGA 6 cut(s) 58, 224, 237, 403, 755, 986
MfeI CAATTG 1 cut(s) 41
MflI RGATCY 2 cut(s) 496, 920
MluCI AATT 8 cut(s) 41, 49, 228, 345, 449, 563, 993, 1015
MnlI CCTC 8 cut(s) 16, 327, 387, 593, 619, 629, 990, 1030
Mph1103I ATGCAT 1 cut(s) 832
MroXI GAANNNNTTC 1 cut(s) 112
MseI TTAA 4 cut(s) 309, 356, 579, 780
MspR9I CCNGG 2 cut(s) 303, 362
MunI CAATTG 1 cut(s) 41
MvaI CCWGG 2 cut(s) 303, 362
MvnI CGCG 1 cut(s) 1071
NcoI CCATGG 2 cut(s) 158, 569
NdeI CATATG 1 cut(s) 895
NdeII GATC 4 cut(s) 496, 663, 920, 1011
NlaIII CATG 8 cut(s) 162, 223, 249, 391, 536, 573, 623, 695
NlaIV GGNNCC 2 cut(s) 146, 171
NmuCI GTSAC 1 cut(s) 865
NsiI ATGCAT 1 cut(s) 832
NspI RCATGY 2 cut(s) 249, 695
NspV TTCGAA 2 cut(s) 279, 343
PagI TCATGA 1 cut(s) 387
PciI ACATGT 2 cut(s) 245, 691
PdmI GAANNNNTTC 1 cut(s) 112
PfeI GAWTC 3 cut(s) 113, 340, 857
PkrI GCNGC 2 cut(s) 136, 1048
Ppu21I YACGTR 1 cut(s) 1139
PpuMI RGGWCCY 1 cut(s) 170
PscI ACATGT 2 cut(s) 245, 691
Psp5II RGGWCCY 1 cut(s) 170
Psp6I CCWGG 2 cut(s) 301, 360
PspGI CCWGG 2 cut(s) 301, 360
PspN4I GGNNCC 2 cut(s) 146, 171
PspPI GGNCC 3 cut(s) 170, 848, 881
PspPPI RGGWCCY 1 cut(s) 170
PstI CTGCAG 1 cut(s) 928
PsuI RGATCY 2 cut(s) 496, 920
RsaI GTAC 1 cut(s) 244
RsaNI GTAC 1 cut(s) 243
SaqAI TTAA 4 cut(s) 309, 356, 579, 780
SatI GCNGC 2 cut(s) 135, 1047
Sau3AI GATC 4 cut(s) 496, 663, 920, 1011
Sau96I GGNCC 3 cut(s) 170, 848, 881
ScrFI CCNGG 2 cut(s) 303, 362
SexAI ACCWGGT 1 cut(s) 301
SfaNI GCATC 5 cut(s) 382, 477, 817, 839, 1146
SfcI CTRYAG 2 cut(s) 543, 924
SfuI TTCGAA 2 cut(s) 279, 343
SinI GGWCC 2 cut(s) 170, 881
SmlI CTYRAG 1 cut(s) 330
SmoI CTYRAG 1 cut(s) 330
Sse9I AATT 8 cut(s) 41, 49, 228, 345, 449, 563, 993, 1015
SsiI CCGC 1 cut(s) 466
SspI AATATT 2 cut(s) 267, 682
StyD4I CCNGG 2 cut(s) 301, 360
StyI CCWWGG 2 cut(s) 158, 569
TaaI ACNGT 1 cut(s) 871
TaiI ACGT 1 cut(s) 1141
TaqI TCGA 2 cut(s) 279, 343
TasI AATT 8 cut(s) 41, 49, 228, 345, 449, 563, 993, 1015
TfiI GAWTC 3 cut(s) 113, 340, 857
Tru1I TTAA 4 cut(s) 309, 356, 579, 780
Tru9I TTAA 4 cut(s) 309, 356, 579, 780
TscAI CASTG 2 cut(s) 808, 933
TseFI GTSAC 1 cut(s) 865
TseI GCWGC 2 cut(s) 134, 1046
Tsp45I GTSAC 1 cut(s) 865
TspDTI ATGAA 6 cut(s) 51, 167, 188, 404, 987, 1035
TspGWI ACGGA 1 cut(s) 785
TspRI CASTG 2 cut(s) 808, 933
VpaK11BI GGWCC 2 cut(s) 170, 881
XapI RAATTY 3 cut(s) 49, 228, 345
XceI RCATGY 2 cut(s) 249, 695
XmiI GTMKAC 1 cut(s) 73
XmnI GAANNNNTTC 1 cut(s) 112
Zsp2I ATGCAT 1 cut(s) 832
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.