FvH4_7g13962

Domain of unknown function (DUF4283)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb7
OG0000044
Physical Location & Seq
Forward (+)
12427020 .. 12428310
1291 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_7g13962.t1

Sequence Viewer

Length: 1131 bp
ATGGACGAGCCCAGGGCCTTCTGCCCATGGGGTTTTCTCAATCCTCTTTCAGATCAACCATTGCCCAAAAAGTTGGAGACATCGAAATTGCAACAACCAAAAACTTTTGCTGCAGTTCTTACTAGTGAAGAGGAATCCCATGTTCCTATCAGTAAATTATCAACACCTACAATTAAAGGTGATATTGTCTATGTGAAGATCAATGAGCAAATCTATCAAGATCAAATCAAAGCGTGCCGCACCAATCTCATTGGGCGGTTACTTCTCCGAAAGGGAACAACGCCCTTGAAGACTGAATTTTTGAAGCAGGCACTTCATTCTCTATGGCAGCCTTTGGGTCCTTGGCGGCTGGTCCCTATTGGTAAGGGTAATTTTGATATACACTTCAATTCTGAGGCTGATATGCTCAAGGTTTGGGGCGGTGGAACATGTACCCTGGCCTTTGGATTGTTTTGCTTATCCCAGTGGCAACCAGATTTCCAACCTGGTGAGTTTTTGCCTCAAACTCATGCTCAAGTGTGGATTAAGATGTATGGCCTTAGTCAGGAGTATTGGTACCATCATCACATCATGGAGATTGCCCATGGAGTTGGCACCCCTCTTCAATTGGATGCTGCCACCAAAGAACAACGCTTTGGATACTATGCTAGAGTTTTGGTGGATGTTGACTTGCTTGGGGCTCTCCCAACCTCTGTTATGGAACGTAAGGTCAGACAAGAGTATCGTGTGAAAGTTCCTATGGTGGCTAGTATGGCTTCTCCTCTACAGAATGCAGTTCCAATTGTTTCAGACGAGGATGGTAAACTAGCCAATAACGTTGGTTTGTTGGAGAGGAGTGAACGTGAACAAATGGTTAATAACTCCAACACTCTTGAGATTGGAGATTCTACCCTTGCACAGGTCATCATACCAAATCAGGGTGCTATTCATGATTCTCTCGTTGTAGGGGAGGCGGAGGCGTCTCAAAAGATTGCCTCTTTTGTAGACCAAATTTTGGTTGAAGCGGGGACAAAATTGATTGAAAACTTAGCTGATAAGGTCCTTAATGAGGGGAATGAGGATGAGCAATTCTCTGATTCTGATCATGCTTCTCTTGAATCTGCACATTCAGATACTGATTGCTCTATATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF4283 zf-CCHC_4

Protein Analysis

377

Amino Acids

41.9

Weight (kDa)

5.19

Isoelectric Point (pI)

32.78

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000044)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G07760 AT5G28823
fragaria_vesca FvH4_1g13572 FvH4_2g03281 FvH4_2g04691 FvH4_2g08332 FvH4_2g08333 FvH4_2g15313 FvH4_2g26101 FvH4_2g29541 FvH4_3g06911 FvH4_3g34351 FvH4_3g43733 FvH4_4g02432 FvH4_4g05601 FvH4_4g08213 FvH4_4g09961 FvH4_4g10131 FvH4_4g20001 FvH4_4g20002 FvH4_5g01051 FvH4_5g01401 FvH4_5g27943 FvH4_6g09220 FvH4_6g17383 FvH4_6g35491 FvH4_6g46421 FvH4_7g04151 FvH4_7g13962 FvH4_7g18611 FvH4_7g19491 FvH4_7g19511 FvH4_7g26562
malus_domestica MD06G1221600.v1.1
pyrus_communis pycom10g21150
rosa_chinensis RchiOBHm_Chr1g0337571 RchiOBHm_Chr2g0168771 RchiOBHm_Chr3g0453631 RchiOBHm_Chr6g0278581
rosa_laevigata RLG00000001899 RLG00000001925 RLG00000002026 RLG00000003410 RLG00000003767 RLG00000004304 RLG00000004473 RLG00000004677 RLG00000006856 RLG00000007994 RLG00000009888 RLG00000011627 RLG00000012174 RLG00000012217 RLG00000013118 RLG00000013736 RLG00000014194 RLG00000014251 RLG00000015011 RLG00000015057 RLG00000015235 RLG00000017416 RLG00000018052 RLG00000018537 RLG00000019968 RLG00000020096 RLG00000020263 RLG00000022606 RLG00000023119 RLG00000028111 RLG00000029686 RLG00000030126 RLG00000031124 RLG00000031236 RLG00000032766 RLG00000033171 RLG00000033548 RLG00000033987 RLG00000034062 RLG00000035115 RLG00000035863
rosa_multiflora Rmu_co8036712.1_g000001 Rmu_co8080248.1_g000001 Rmu_co8208334.1_g000001 Rmu_co8253451.1_g000001 Rmu_co8393241.1_g000001 Rmu_co8522225.1_g000005 Rmu_sc0000060.1_g000030 Rmu_sc0000060.1_g000031 Rmu_sc0000060.1_g000032 Rmu_sc0000090.1_g000008 Rmu_sc0000149.1_g000051 Rmu_sc0000149.1_g000058 Rmu_sc0000309.1_g000050 Rmu_sc0000370.1_g000022 Rmu_sc0000370.1_g000023 Rmu_sc0000370.1_g000024 Rmu_sc0000418.1_g000018 Rmu_sc0000427.1_g000014 Rmu_sc0000427.1_g000015 Rmu_sc0000434.1_g000008 Rmu_sc0000487.1_g000038 Rmu_sc0000487.1_g000039 Rmu_sc0000569.1_g000029 Rmu_sc0000580.1_g000097 Rmu_sc0000595.1_g000068 Rmu_sc0000607.1_g000027 Rmu_sc0000738.1_g000004 Rmu_sc0000758.1_g000001 Rmu_sc0000758.1_g000002 Rmu_sc0000870.1_g000019 Rmu_sc0000924.1_g000040 Rmu_sc0000924.1_g000041 Rmu_sc0000999.1_g000037 Rmu_sc0001001.1_g000001 Rmu_sc0001010.1_g000080 Rmu_sc0001075.1_g000041 Rmu_sc0001097.1_g000016 Rmu_sc0001173.1_g000020 Rmu_sc0001258.1_g000010 Rmu_sc0001425.1_g000031 Rmu_sc0001493.1_g000020 Rmu_sc0001493.1_g000021 Rmu_sc0001644.1_g000024 Rmu_sc0001648.1_g000039 Rmu_sc0001662.1_g000002 Rmu_sc0001849.1_g000046 Rmu_sc0001851.1_g000038 Rmu_sc0001861.1_g000006 Rmu_sc0001899.1_g000008 Rmu_sc0002231.1_g000023 Rmu_sc0002393.1_g000012 Rmu_sc0002515.1_g000010 Rmu_sc0002551.1_g000013 Rmu_sc0002680.1_g000029 Rmu_sc0002700.1_g000030 Rmu_sc0002700.1_g000031 Rmu_sc0002709.1_g000035 Rmu_sc0002779.1_g000017 Rmu_sc0003267.1_g000040 Rmu_sc0003306.1_g000009 Rmu_sc0003338.1_g000014 Rmu_sc0003522.1_g000038 Rmu_sc0003522.1_g000039 Rmu_sc0003653.1_g000031 Rmu_sc0003901.1_g000003 Rmu_sc0003920.1_g000009 Rmu_sc0004014.1_g000009 Rmu_sc0004016.1_g000013 Rmu_sc0004031.1_g000002 Rmu_sc0004106.1_g000001 Rmu_sc0004432.1_g000004 Rmu_sc0004481.1_g000020 Rmu_sc0004874.1_g000005 Rmu_sc0004928.1_g000005 Rmu_sc0005065.1_g000053 Rmu_sc0005091.1_g000005 Rmu_sc0005217.1_g000015 Rmu_sc0005242.1_g000002 Rmu_sc0005300.1_g000011 Rmu_sc0005400.1_g000004 Rmu_sc0005486.1_g000007 Rmu_sc0005527.1_g000015 Rmu_sc0006059.1_g000021 Rmu_sc0006087.1_g000004 Rmu_sc0006184.1_g000006 Rmu_sc0006184.1_g000007 Rmu_sc0006578.1_g000006 Rmu_sc0006730.1_g000010 Rmu_sc0006736.1_g000030 Rmu_sc0006736.1_g000033 Rmu_sc0007333.1_g000018 Rmu_sc0007856.1_g000010 Rmu_sc0008231.1_g000003 Rmu_sc0009862.1_g000012 Rmu_sc0010547.1_g000001 Rmu_sc0010547.1_g000003 Rmu_sc0010632.1_g000012 Rmu_sc0010747.1_g000008 Rmu_sc0011075.1_g000009 Rmu_sc0011565.1_g000004 Rmu_sc0011641.1_g000003 Rmu_sc0013102.1_g000013 Rmu_sc0013160.1_g000006 Rmu_sc0014846.1_g000004 Rmu_sc0017037.1_g000003 Rmu_sc0018203.1_g000001 Rmu_sc0018204.1_g000001 Rmu_sc0018348.1_g000001 Rmu_sc0019354.1_g000002 Rmu_sc0021630.1_g000002 Rmu_sc0022987.1_g000002 Rmu_sc0024469.1_g000005 Rmu_sc0033519.1_g000001 Rmu_sc0033519.1_g000002 Rmu_sc0033519.1_g000003 Rmu_sc0042775.1_g000001 Rmu_ssc0000110.1_g000003 Rmu_ssc0000110.1_g000004 Rmu_ssc0000126.1_g000068 Rmu_ssc0000200.1_g000007 Rmu_ssc0000295.1_g000003 Rmu_ssc0000295.1_g000004 Rmu_ssc0000299.1_g000010 Rmu_ssc0000308.1_g000024 Rmu_ssc0000339.1_g000006 Rmu_ssc0000385.1_g000012 Rmu_ssc0000409.1_g000004 Rmu_ssc0000421.1_g000004
rosa_roxburghii Rroxscaffold_156G00440360 Rroxscaffold_166G00440800 Rroxscaffold_1G00039040 Rroxscaffold_1G00039050 Rroxscaffold_1G00073950 Rroxscaffold_2G00091710 Rroxscaffold_2G00120050 Rroxscaffold_2G00122590 Rroxscaffold_3G00219700 Rroxscaffold_3G00264140 Rroxscaffold_4G00290600 Rroxscaffold_4G00323610 Rroxscaffold_4G00328460 Rroxscaffold_5G00343440 Rroxscaffold_5G00343570 Rroxscaffold_5G00378540 Rroxscaffold_5G00385090 Rroxscaffold_7G00169130 Rroxscaffold_7G00216420
rosa_rugosa Rorug01G0065800 Rorug01G0073500 Rorug01G0091700 Rorug01G0096500 Rorug01G0204700.1 Rorug01G0249100 Rorug01G0333800 Rorug01G0333900 Rorug01G0339500 Rorug01G0431300 Rorug02G0085400 Rorug02G0117500 Rorug02G0130900 Rorug02G0178800 Rorug02G0226700 Rorug02G0336300 Rorug02G0338700 Rorug02G0351400 Rorug02G0459900 Rorug03G0187000 Rorug03G0223700 Rorug03G0291300 Rorug03G0291300 Rorug03G0311100 Rorug03G0316900 Rorug03G0346000 Rorug04G0014500 Rorug04G0014600 Rorug04G0124100 Rorug04G0136500 Rorug04G0302000 Rorug04G0338100 Rorug04G0338200 Rorug04G0413100 Rorug05G0182200 Rorug05G0226500 Rorug05G0273300 Rorug05G0292200 Rorug05G0292200 Rorug05G0392500 Rorug05G0394500 Rorug05G0394600 Rorug05G0505600.1 Rorug06G0351400 Rorug06G0393400 Rorug06G0393600 Rorug06G0470000 Rorug07G0063100 Rorug07G0086800 Rorug07G0109200 Rorug07G0236100
rosa_samantha Rh1AG010800 Rh1AG011100 Rh1AG064900 Rh1AG088000 Rh1AG207100 Rh1AG262000 Rh1AG300800 Rh1BG043000 Rh1BG144600 Rh1BG180700 Rh1BG180800 Rh1BG328800 Rh1BG399400 Rh1CG041400 Rh1CG047300 Rh1CG379700 Rh1DG036500 Rh1DG083000 Rh1DG210700 Rh1DG210800 Rh1DG231100 Rh2AG007900 Rh2AG055500 Rh2AG339100 Rh2AG368100 Rh2BG243300 Rh2BG258900 Rh2BG292000 Rh2BG333500 Rh2BG387300 Rh2BG612800 Rh2BG619100 Rh2CG026500 Rh2CG163600 Rh2CG535700 Rh2DG186400 Rh2DG235000 Rh2DG314500 Rh2DG388500 Rh2DG391400 Rh2DG496900 Rh2DG526700 Rh2DG570700 Rh3AG330700 Rh3BG266900 Rh3CG236000 Rh3CG340400 Rh3DG090000 Rh3DG278400 Rh3DG297600 Rh3DG362600 Rh4AG001300 Rh4AG023300 Rh4AG097100 Rh4AG427000 Rh4BG029400 Rh4BG032400 Rh4BG086000 Rh4BG249200 Rh4CG001900 Rh4CG040600 Rh4CG093000 Rh4CG106300 Rh4CG113200 Rh4CG113900 Rh4DG002300 Rh4DG144400 Rh4DG234200 Rh5AG043700 Rh5AG084900 Rh5AG161500 Rh5AG409000 Rh5AG457200 Rh5AG457900 Rh5AG473700 Rh5AG520600 Rh5BG042100 Rh5BG124100 Rh5BG323500 Rh5BG417200 Rh5BG443700 Rh5BG451500 Rh5BG464900 Rh5BG470400 Rh5BG522500 Rh5CG068800 Rh5CG178300 Rh5CG231000 Rh5CG258600 Rh5CG394500 Rh5CG473700 Rh5DG164700 Rh5DG235400 Rh5DG261300 Rh5DG304900 Rh5DG334500 Rh5DG424300 Rh5DG458400 Rh5DG478600 Rh5DG552300 Rh5DG552700 Rh6AG037000 Rh6AG042100 Rh6AG255500 Rh6AG283400 Rh6AG291800 Rh6BG049600 Rh6BG080700 Rh6BG114600 Rh6BG128900 Rh6BG352500 Rh6CG052400 Rh6CG112900 Rh6CG113000 Rh6CG131300 Rh6CG157700 Rh6CG243200 Rh6CG254100 Rh6CG275700 Rh6CG299700 Rh6CG309100 Rh6CG317600 Rh6CG342600 Rh6CG471900 Rh6DG038200 Rh6DG102300 Rh6DG114400 Rh6DG225900 Rh6DG292900 Rh6DG320700 Rh6DG512800 Rh7AG217700 Rh7AG313900 Rh7AG446000 Rh7AG472600 Rh7BG223100 Rh7BG349900 Rh7BG352000 Rh7CG160200 Rh7CG233900 Rh7CG242700 Rh7CG273900 Rh7CG306400 Rh7CG322200 Rh7DG053800 Rh7DG077800 Rh7DG227700 Rh7DG404800
rosa_wichuraiana Rw0G003990 Rw2G022110 Rw2G024890 Rw6G005700 Rw7G008770

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 555
AccB1I GGYRCC 2 cut(s) 555, 593
AccB7I CCANNNNNTGG 1 cut(s) 994
AccI GTMKAC 1 cut(s) 984
AciI CCGC 6 cut(s) 238, 256, 346, 420, 953, 1004
AclI AACGTT 1 cut(s) 816
AcsI RAATTY 2 cut(s) 296, 990
AcyI GRCGYC 1 cut(s) 959
AfaI GTAC 2 cut(s) 433, 557
AfiI CCNNNNNNNGG 5 cut(s) 544, 898, 917, 994, 1048
AflIII ACRYGT 1 cut(s) 428
AgsI TTSAA 7 cut(s) 289, 304, 388, 605, 1001, 1022, 1097
AhlI ACTAGT 1 cut(s) 122
AjnI CCWGG 3 cut(s) 11, 435, 484
AjuI GAANNNNNNNTTGG 2 cut(s) 618, 650
AluBI AGCT 1 cut(s) 1031
AluI AGCT 1 cut(s) 1031
Alw26I GTCTC 2 cut(s) 71, 966
AlwNI CAGNNNCTG 1 cut(s) 1115
AoxI GGCC 3 cut(s) 15, 438, 535
ApeKI GCWGC 3 cut(s) 110, 328, 614
ApoI RAATTY 2 cut(s) 296, 990
ArsI GACNNNNNNTTYG 2 cut(s) 283, 315
Asp718I GGTACC 1 cut(s) 555
AspS9I GGNCC 4 cut(s) 15, 338, 352, 1039
AsuHPI GGTGA 2 cut(s) 191, 500
AvaII GGWCC 3 cut(s) 338, 352, 1039
BaeI ACNNNNGTAYC 2 cut(s) 704, 737
BanI GGYRCC 2 cut(s) 555, 593
BanII GRGCYC 2 cut(s) 12, 682
BbsI GAAGAC 1 cut(s) 296
BbvI GCAGC 3 cut(s) 97, 340, 601
BccI CCATC 2 cut(s) 567, 791
BciT130I CCWGG 3 cut(s) 13, 437, 486
BciVI GTATCC 1 cut(s) 632
BclI TGATCA 1 cut(s) 1081
BcoDI GTCTC 2 cut(s) 71, 966
BcuI ACTAGT 1 cut(s) 122
BfaI CTAG 4 cut(s) 123, 648, 747, 806
BfmI CTRYAG 2 cut(s) 111, 764
BfuI GTATCC 1 cut(s) 632
BisI GCNGC 5 cut(s) 111, 238, 329, 347, 615
BlsI GCNGC 5 cut(s) 112, 239, 330, 348, 616
Bme1390I CCNGG 3 cut(s) 13, 437, 486
Bme18I GGWCC 3 cut(s) 338, 352, 1039
BmgT120I GGNCC 4 cut(s) 15, 338, 352, 1039
BmiI GGNNCC 4 cut(s) 339, 354, 557, 595
BmrFI CCNGG 3 cut(s) 13, 437, 486
BmrI ACTGGG 1 cut(s) 457
BmsI GCATC 1 cut(s) 601
BmuI ACTGGG 1 cut(s) 457
BpiI GAAGAC 1 cut(s) 296
BplI GAGNNNNNCTC 2 cut(s) 1055, 1087
BpuEI CTTGAG 3 cut(s) 392, 498, 893
BsaBI GATNNNNATC 1 cut(s) 1080
BsaHI GRCGYC 1 cut(s) 959
BsaJI CCNNGG 6 cut(s) 11, 12, 26, 341, 435, 583
BsaXI ACNNNNNCTCC 4 cut(s) 539, 569, 826, 856
Bsc4I CCNNNNNNNGG 5 cut(s) 544, 898, 917, 994, 1048
Bse1I ACTGG 1 cut(s) 463
Bse3DI GCAATG 1 cut(s) 59
Bse8I GATNNNNATC 1 cut(s) 1080
BseBI CCWGG 3 cut(s) 13, 437, 486
BseDI CCNNGG 6 cut(s) 11, 12, 26, 341, 435, 583
BseGI GGATG 4 cut(s) 616, 667, 802, 1066
BseJI GATNNNNATC 1 cut(s) 1080
BseLI CCNNNNNNNGG 5 cut(s) 544, 898, 917, 994, 1048
BseMI GCAATG 1 cut(s) 59
BseMII CTCAG 1 cut(s) 384
BseNI ACTGG 1 cut(s) 463
BseRI GAGGAG 2 cut(s) 750, 847
BseXI GCAGC 3 cut(s) 97, 340, 601
BsgI GTGCAG 1 cut(s) 1086
BshFI GGCC 3 cut(s) 17, 440, 537
BshNI GGYRCC 2 cut(s) 555, 593
BslFI GGGAC 2 cut(s) 338, 1021
BslI CCNNNNNNNGG 5 cut(s) 544, 898, 917, 994, 1048
BsmAI GTCTC 2 cut(s) 71, 966
BsmBI CGTCTC 1 cut(s) 966
BsmFI GGGAC 2 cut(s) 338, 1021
BsmI GAATGC 1 cut(s) 775
BsnI GGCC 3 cut(s) 17, 440, 537
Bsp1286I GDGCHC 2 cut(s) 12, 682
Bsp143I GATC 4 cut(s) 52, 198, 220, 1081
Bsp19I CCATGG 2 cut(s) 26, 583
BspACI CCGC 6 cut(s) 238, 256, 346, 420, 953, 1004
BspANI GGCC 3 cut(s) 17, 440, 537
BspCNI CTCAG 1 cut(s) 385
BspHI TCATGA 1 cut(s) 928
BspLI GGNNCC 4 cut(s) 339, 354, 557, 595
BspMAI CTGCAG 1 cut(s) 115
BspT107I GGYRCC 2 cut(s) 555, 593
BsrDI GCAATG 1 cut(s) 59
BsrI ACTGG 1 cut(s) 463
BssECI CCNNGG 6 cut(s) 11, 12, 26, 341, 435, 583
BssMI GATC 4 cut(s) 52, 198, 220, 1081
BssNI GRCGYC 1 cut(s) 959
BssT1I CCWWGG 3 cut(s) 26, 341, 583
Bst2UI CCWGG 3 cut(s) 13, 437, 486
Bst6I CTCTTC 2 cut(s) 123, 606
BstACI GRCGYC 1 cut(s) 959
BstC8I GCNNGC 2 cut(s) 235, 309
BstDEI CTNAG 3 cut(s) 393, 539, 1027
BstDSI CCRYGG 2 cut(s) 26, 583
BstENI CCTNNNNNAGG 3 cut(s) 542, 896, 1046
BstF5I GGATG 4 cut(s) 616, 667, 802, 1066
BstKTI GATC 4 cut(s) 55, 201, 223, 1084
BstMAI GTCTC 2 cut(s) 71, 966
BstMBI GATC 4 cut(s) 52, 198, 220, 1081
BstMWI GCNNNNNNNGC 1 cut(s) 752
BstNI CCWGG 3 cut(s) 13, 437, 486
BstNSI RCATGY 1 cut(s) 432
BstSCI CCNGG 3 cut(s) 11, 435, 484
BstSFI CTRYAG 2 cut(s) 111, 764
BstV1I GCAGC 3 cut(s) 97, 340, 601
BstV2I GAAGAC 1 cut(s) 296
BstXI CCANNNNNNTGG 2 cut(s) 73, 590
BsuI GTATCC 1 cut(s) 632
BsuRI GGCC 3 cut(s) 17, 440, 537
BtgI CCRYGG 2 cut(s) 26, 583
BtsCI GGATG 4 cut(s) 616, 667, 802, 1066
BtsIMutI CAGTG 1 cut(s) 470
Cac8I GCNNGC 2 cut(s) 235, 309
CaiI CAGNNNCTG 1 cut(s) 1115
CciI TCATGA 1 cut(s) 928
Cfr13I GGNCC 4 cut(s) 15, 338, 352, 1039
CseI GACGC 1 cut(s) 948
CsiI ACCWGGT 1 cut(s) 484
Csp6I GTAC 2 cut(s) 432, 556
CviAII CATG 8 cut(s) 27, 140, 429, 509, 571, 584, 929, 1085
CviQI GTAC 2 cut(s) 432, 556
DdeI CTNAG 3 cut(s) 393, 539, 1027
DpnI GATC 4 cut(s) 54, 200, 222, 1083
DpnII GATC 4 cut(s) 52, 198, 220, 1081
Eam1104I CTCTTC 2 cut(s) 123, 606
EarI CTCTTC 2 cut(s) 123, 606
EciI GGCGGA 1 cut(s) 968
Eco130I CCWWGG 3 cut(s) 26, 341, 583
Eco24I GRGCYC 2 cut(s) 12, 682
Eco47I GGWCC 3 cut(s) 338, 352, 1039
EcoNI CCTNNNNNAGG 3 cut(s) 542, 896, 1046
EcoO109I RGGNCCY 3 cut(s) 15, 338, 1039
EcoRII CCWGG 3 cut(s) 11, 435, 484
EcoT14I CCWWGG 3 cut(s) 26, 341, 583
EcoT38I GRGCYC 2 cut(s) 12, 682
ErhI CCWWGG 3 cut(s) 26, 341, 583
Esp3I CGTCTC 1 cut(s) 966
FaeI CATG 8 cut(s) 30, 143, 432, 512, 574, 587, 932, 1088
FaqI GGGAC 2 cut(s) 338, 1021
FatI CATG 8 cut(s) 26, 139, 428, 508, 570, 583, 928, 1084
FauI CCCGC 1 cut(s) 997
FbaI TGATCA 1 cut(s) 1081
FblI GTMKAC 1 cut(s) 984
Fnu4HI GCNGC 5 cut(s) 111, 238, 329, 347, 615
FokI GGATG 4 cut(s) 623, 674, 809, 1073
FriOI GRGCYC 2 cut(s) 12, 682
Fsp4HI GCNGC 5 cut(s) 111, 238, 329, 347, 615
FspBI CTAG 4 cut(s) 123, 648, 747, 806
GluI GCNGC 5 cut(s) 111, 238, 329, 347, 615
HaeIII GGCC 3 cut(s) 17, 440, 537
HgaI GACGC 1 cut(s) 948
Hin1I GRCGYC 1 cut(s) 959
Hin1II CATG 8 cut(s) 30, 143, 432, 512, 574, 587, 932, 1088
HincII GTYRAC 1 cut(s) 667
HindII GTYRAC 1 cut(s) 667
HinfI GANTC 5 cut(s) 134, 884, 932, 1076, 1097
HphI GGTGA 2 cut(s) 191, 500
Hpy166II GTNNAC 5 cut(s) 667, 803, 839, 845, 985
Hpy188I TCNGA 8 cut(s) 52, 269, 394, 713, 790, 1075, 1081, 1111
Hpy188III TCNNGA 5 cut(s) 218, 545, 872, 929, 1094
Hpy8I GTNNAC 5 cut(s) 667, 803, 839, 845, 985
HpyAV CCTTC 1 cut(s) 28
HpyCH4IV ACGT 3 cut(s) 703, 816, 841
HpyCH4V TGCA 5 cut(s) 91, 113, 773, 896, 1103
HpyF10VI GCNNNNNNNGC 1 cut(s) 752
HpyF3I CTNAG 3 cut(s) 393, 539, 1027
HpySE526I ACGT 3 cut(s) 703, 816, 841
Hsp92I GRCGYC 1 cut(s) 959
Hsp92II CATG 8 cut(s) 30, 143, 432, 512, 574, 587, 932, 1088
KpnI GGTACC 1 cut(s) 559
Ksp22I TGATCA 1 cut(s) 1081
Kzo9I GATC 4 cut(s) 52, 198, 220, 1081
Lsp1109I GCAGC 3 cut(s) 97, 340, 601
LweI GCATC 1 cut(s) 601
MabI ACCWGGT 1 cut(s) 484
MaeI CTAG 4 cut(s) 123, 648, 747, 806
MaeII ACGT 3 cut(s) 703, 816, 841
MaeIII GTNAC 1 cut(s) 258
MalI GATC 4 cut(s) 54, 200, 222, 1083
MboI GATC 4 cut(s) 52, 198, 220, 1081
MboII GAAGA 4 cut(s) 140, 208, 301, 593
MfeI CAATTG 2 cut(s) 605, 780
MhlI GDGCHC 2 cut(s) 12, 682
MmeI TCCRAC 4 cut(s) 54, 505, 807, 888
MseI TTAA 4 cut(s) 174, 525, 855, 1044
MspR9I CCNGG 3 cut(s) 13, 437, 486
MunI CAATTG 2 cut(s) 605, 780
Mva1269I GAATGC 1 cut(s) 775
MvaI CCWGG 3 cut(s) 13, 437, 486
MwoI GCNNNNNNNGC 1 cut(s) 752
NcoI CCATGG 2 cut(s) 26, 583
NdeII GATC 4 cut(s) 52, 198, 220, 1081
NlaIII CATG 8 cut(s) 30, 143, 432, 512, 574, 587, 932, 1088
NlaIV GGNNCC 4 cut(s) 339, 354, 557, 595
NspI RCATGY 1 cut(s) 432
PagI TCATGA 1 cut(s) 928
PasI CCCWGGG 1 cut(s) 12
PciI ACATGT 1 cut(s) 428
PctI GAATGC 1 cut(s) 775
PfeI GAWTC 5 cut(s) 134, 884, 932, 1076, 1097
PflMI CCANNNNNTGG 1 cut(s) 994
PkrI GCNGC 5 cut(s) 112, 239, 330, 348, 616
PpuMI RGGWCCY 2 cut(s) 338, 1039
PscI ACATGT 1 cut(s) 428
Psp1406I AACGTT 1 cut(s) 816
Psp5II RGGWCCY 2 cut(s) 338, 1039
Psp6I CCWGG 3 cut(s) 11, 435, 484
PspGI CCWGG 3 cut(s) 11, 435, 484
PspN4I GGNNCC 4 cut(s) 339, 354, 557, 595
PspPI GGNCC 4 cut(s) 15, 338, 352, 1039
PspPPI RGGWCCY 2 cut(s) 338, 1039
PstI CTGCAG 1 cut(s) 115
PstNI CAGNNNCTG 1 cut(s) 1115
RsaI GTAC 2 cut(s) 433, 557
RsaNI GTAC 2 cut(s) 432, 556
SaqAI TTAA 4 cut(s) 174, 525, 855, 1044
SatI GCNGC 5 cut(s) 111, 238, 329, 347, 615
Sau3AI GATC 4 cut(s) 52, 198, 220, 1081
Sau96I GGNCC 4 cut(s) 15, 338, 352, 1039
ScrFI CCNGG 3 cut(s) 13, 437, 486
SduI GDGCHC 2 cut(s) 12, 682
SexAI ACCWGGT 1 cut(s) 484
SfaNI GCATC 1 cut(s) 601
SfcI CTRYAG 2 cut(s) 111, 764
SinI GGWCC 3 cut(s) 338, 352, 1039
SmlI CTYRAG 3 cut(s) 407, 513, 872
SmoI CTYRAG 3 cut(s) 407, 513, 872
SpeI ACTAGT 1 cut(s) 122
SsiI CCGC 6 cut(s) 238, 256, 346, 420, 953, 1004
SspMI CTAG 4 cut(s) 123, 648, 747, 806
StyD4I CCNGG 3 cut(s) 11, 435, 484
StyI CCWWGG 3 cut(s) 26, 341, 583
TaiI ACGT 3 cut(s) 706, 819, 844
TaqI TCGA 1 cut(s) 83
TauI GCSGC 2 cut(s) 240, 349
TfiI GAWTC 5 cut(s) 134, 884, 932, 1076, 1097
Tru1I TTAA 4 cut(s) 174, 525, 855, 1044
Tru9I TTAA 4 cut(s) 174, 525, 855, 1044
TscAI CASTG 1 cut(s) 470
TseI GCWGC 3 cut(s) 110, 328, 614
TspDTI ATGAA 2 cut(s) 305, 917
TspRI CASTG 1 cut(s) 470
Van91I CCANNNNNTGG 1 cut(s) 994
VpaK11BI GGWCC 3 cut(s) 338, 352, 1039
XagI CCTNNNNNAGG 3 cut(s) 542, 896, 1046
XapI RAATTY 2 cut(s) 296, 990
XceI RCATGY 1 cut(s) 432
XmiI GTMKAC 1 cut(s) 984
XspI CTAG 4 cut(s) 123, 648, 747, 806
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.