Rh4CG093000

This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the transport of calcium

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4C
Physical Location & Seq
Forward (+)
16859190 .. 16872709
13520 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh4CG093000.1

Sequence Viewer

Length: 1983 bp
ATGGAAATCGCTCGGGGTGTCGGAACTCCATTGCAAATTGATAAAGCCACAAGGGAAAGGCAATTCGGGTATTTTGCTCGAGTCTTGATTGATGTGGATCTTGCAGGTGACTTACCACCTTCTTTGATGGTGGAGCGGGAAACTCATTGTTTTCCGATTGAAGTGGTCTATGAGAATGTGTGTACTCATTGTGGGAAGGTTGGCCACATGGTTGATCAATGCAGGTTCTTGAAGAGCTCTAACAATGAGCAAAATGCTCAAGAACATAAGGCTGCTAAAAAAACTTCTCGCATTGGGCGTCAAGAGTATCGTCCCAAGACGGCTGTAAACAAGGTTTCTGACCAAAATTTGAACACTACCCCTCAGGTGCAACACTCCCCTGAGGTTGCAAACAATGATCAGATTACTAAATTTGTAGAAGATGTTCTCACTGAGGCCGTTGAACAGGAACTGGATTGTATTGCTGATCTGGTCATTAATGAACCCATAGTCAACAGGAAGCCTGAATGTTGTAAAGGCAACATGTCTCCTCTGATCAATAAGAATAAGTTTACCATCCTTGCAAGCAAGGAAACTGAAGCAGTGGTTGACACTATTCCTAATGAATTTGCTCCAGTTGTTGGAACAACTAGTTTGGAGGACCCTACGGTTCACATTACTGATGGAGATGATGAAGTTGACAGTGATAATGAAATGTGTGATGAAGAGGAAAGTCTGTTTGATCTGGTTGATTTACCTGCGGTAACTCATGGCTCCGGCCGGAATTGGAAGAACCCACTCTCCAACCGAAAATTTCGGCTTGGTGCAGGAGGAGACTCTTCTCTCTCCAACAGCGAAATCTCAGAGAAAGAGTTGGAAGCAGACAAGCAGGTTGACTTTACGGTCGCGTGGATCCTGAAGTGGACCTCAATAGTCAATATAGCACTGTGCTGTACGGACCAGCATATGAGTCACCCAATAAGCAGCTCGCCTGACCGACCAAACCACGATTTAGAGGCCGGAACCAGTCGCTCAGGCAACGTGAACGACGATGAGTCGTGGACTAATCCTTTTGATATGAACAGTACCAAGTATGCTTCTGTTGAACGCCTCAAGCGTTGGAGGAAAGCAGCACTTGTACTGAATTCTTCTCGCCGATTCCGATACACCCTCAACTTGAAAAAGGAAGAAGAGAAGAAACAGATACTGAGGAAGATAAGAGCACATGCACAAGCCATACGAGCTGCATCTTTATACGCAGAAGTTGGAAATCCCTTGCAAGGAACTTTACAACCGATACCATCCACTGCTGGCGATTTTCAGATTGCCCATGAGCAACTTGTTTCAGTGATCAGGGACCGTGACTTACATGCTATGCAGCAATATGGGGGAGTCAGTGGCTTAGCAGATTTATTGAAAACCAATCTACACAAGGGAATTCTTGGTGATAGTGCTGATTGTCTAAACCGGAAAAATGCATTTGGATCCAACACATATCCTCCTGGAAGAGCAAGGAGTTTCTTGACTATTCTTTGGGAAGCCTGGCAAGACCTTACTCTGATCATTTTGATGACAGCAGCAGTGGCTACCTTAGGGCTACATATAAATATGAAGGATATGAAGGAGGAATGGTATGGTGGTGGCAGCATTGCTTTAGCAGTTATTCTTGTCATTGTTGTCATAGCCATTAGTGATTACAATGAATCCCTGCGCTTCCAGAGTTTGATCGCAGAGAGGAGAAATATACATTTAGAGGTCATCAGAGGTGGTAGACGAGTTGAAGTTTCTATCTATGATATTGTTGTTGGTGATGTTGTACCGCTTAGCATTGGTGATCAGGTCCCTGCTGATGGTATTTTAATCACTGGCTACTCACTTGCTACAGAGGAGACCCAAATCATTGGGGATAGCAAGATTGTTCACAAGGACTGCAAGGACCCATTTCTGATGTCTGGCTGCAAAATTGCATATGGGAGTGGTACAATGCTGTGTCTTGAAAGCTAG

Protein Analysis

660

Amino Acids

73.2

Weight (kDa)

5.36

Isoelectric Point (pI)

43.36

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
CaATP_NAI PF12515 349 - 391 1.2e-15 Ca2+-ATPase N terminal autoinhibitory domain
Cation_ATPase_N PF00690 455 - 521 1e-10 Cation transporter/ATPase, N-terminus
E1-E2_ATPase PF00122 578 - 654 2.1e-11 P-type ATPase actuator domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000044)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G07760 AT5G28823
fragaria_vesca FvH4_1g13572 FvH4_2g03281 FvH4_2g04691 FvH4_2g08332 FvH4_2g08333 FvH4_2g15313 FvH4_2g26101 FvH4_2g29541 FvH4_3g06911 FvH4_3g34351 FvH4_3g43733 FvH4_4g02432 FvH4_4g05601 FvH4_4g08213 FvH4_4g09961 FvH4_4g10131 FvH4_4g20001 FvH4_4g20002 FvH4_5g01051 FvH4_5g01401 FvH4_5g27943 FvH4_6g09220 FvH4_6g17383 FvH4_6g35491 FvH4_6g46421 FvH4_7g04151 FvH4_7g13962 FvH4_7g18611 FvH4_7g19491 FvH4_7g19511 FvH4_7g26562
malus_domestica MD06G1221600.v1.1
pyrus_communis pycom10g21150
rosa_chinensis RchiOBHm_Chr1g0337571 RchiOBHm_Chr2g0168771 RchiOBHm_Chr3g0453631 RchiOBHm_Chr6g0278581
rosa_laevigata RLG00000001899 RLG00000001925 RLG00000002026 RLG00000003410 RLG00000003767 RLG00000004304 RLG00000004473 RLG00000004677 RLG00000006856 RLG00000007994 RLG00000009888 RLG00000011627 RLG00000012174 RLG00000012217 RLG00000013118 RLG00000013736 RLG00000014194 RLG00000014251 RLG00000015011 RLG00000015057 RLG00000015235 RLG00000017416 RLG00000018052 RLG00000018537 RLG00000019968 RLG00000020096 RLG00000020263 RLG00000022606 RLG00000023119 RLG00000028111 RLG00000029686 RLG00000030126 RLG00000031124 RLG00000031236 RLG00000032766 RLG00000033171 RLG00000033548 RLG00000033987 RLG00000034062 RLG00000035115 RLG00000035863
rosa_multiflora Rmu_co8036712.1_g000001 Rmu_co8080248.1_g000001 Rmu_co8208334.1_g000001 Rmu_co8253451.1_g000001 Rmu_co8393241.1_g000001 Rmu_co8522225.1_g000005 Rmu_sc0000060.1_g000030 Rmu_sc0000060.1_g000031 Rmu_sc0000060.1_g000032 Rmu_sc0000090.1_g000008 Rmu_sc0000149.1_g000051 Rmu_sc0000149.1_g000058 Rmu_sc0000309.1_g000050 Rmu_sc0000370.1_g000022 Rmu_sc0000370.1_g000023 Rmu_sc0000370.1_g000024 Rmu_sc0000418.1_g000018 Rmu_sc0000427.1_g000014 Rmu_sc0000427.1_g000015 Rmu_sc0000434.1_g000008 Rmu_sc0000487.1_g000038 Rmu_sc0000487.1_g000039 Rmu_sc0000569.1_g000029 Rmu_sc0000580.1_g000097 Rmu_sc0000595.1_g000068 Rmu_sc0000607.1_g000027 Rmu_sc0000738.1_g000004 Rmu_sc0000758.1_g000001 Rmu_sc0000758.1_g000002 Rmu_sc0000870.1_g000019 Rmu_sc0000924.1_g000040 Rmu_sc0000924.1_g000041 Rmu_sc0000999.1_g000037 Rmu_sc0001001.1_g000001 Rmu_sc0001010.1_g000080 Rmu_sc0001075.1_g000041 Rmu_sc0001097.1_g000016 Rmu_sc0001173.1_g000020 Rmu_sc0001258.1_g000010 Rmu_sc0001425.1_g000031 Rmu_sc0001493.1_g000020 Rmu_sc0001493.1_g000021 Rmu_sc0001644.1_g000024 Rmu_sc0001648.1_g000039 Rmu_sc0001662.1_g000002 Rmu_sc0001849.1_g000046 Rmu_sc0001851.1_g000038 Rmu_sc0001861.1_g000006 Rmu_sc0001899.1_g000008 Rmu_sc0002231.1_g000023 Rmu_sc0002393.1_g000012 Rmu_sc0002515.1_g000010 Rmu_sc0002551.1_g000013 Rmu_sc0002680.1_g000029 Rmu_sc0002700.1_g000030 Rmu_sc0002700.1_g000031 Rmu_sc0002709.1_g000035 Rmu_sc0002779.1_g000017 Rmu_sc0003267.1_g000040 Rmu_sc0003306.1_g000009 Rmu_sc0003338.1_g000014 Rmu_sc0003522.1_g000038 Rmu_sc0003522.1_g000039 Rmu_sc0003653.1_g000031 Rmu_sc0003901.1_g000003 Rmu_sc0003920.1_g000009 Rmu_sc0004014.1_g000009 Rmu_sc0004016.1_g000013 Rmu_sc0004031.1_g000002 Rmu_sc0004106.1_g000001 Rmu_sc0004432.1_g000004 Rmu_sc0004481.1_g000020 Rmu_sc0004874.1_g000005 Rmu_sc0004928.1_g000005 Rmu_sc0005065.1_g000053 Rmu_sc0005091.1_g000005 Rmu_sc0005217.1_g000015 Rmu_sc0005242.1_g000002 Rmu_sc0005300.1_g000011 Rmu_sc0005400.1_g000004 Rmu_sc0005486.1_g000007 Rmu_sc0005527.1_g000015 Rmu_sc0006059.1_g000021 Rmu_sc0006087.1_g000004 Rmu_sc0006184.1_g000006 Rmu_sc0006184.1_g000007 Rmu_sc0006578.1_g000006 Rmu_sc0006730.1_g000010 Rmu_sc0006736.1_g000030 Rmu_sc0006736.1_g000033 Rmu_sc0007333.1_g000018 Rmu_sc0007856.1_g000010 Rmu_sc0008231.1_g000003 Rmu_sc0009862.1_g000012 Rmu_sc0010547.1_g000001 Rmu_sc0010547.1_g000003 Rmu_sc0010632.1_g000012 Rmu_sc0010747.1_g000008 Rmu_sc0011075.1_g000009 Rmu_sc0011565.1_g000004 Rmu_sc0011641.1_g000003 Rmu_sc0013102.1_g000013 Rmu_sc0013160.1_g000006 Rmu_sc0014846.1_g000004 Rmu_sc0017037.1_g000003 Rmu_sc0018203.1_g000001 Rmu_sc0018204.1_g000001 Rmu_sc0018348.1_g000001 Rmu_sc0019354.1_g000002 Rmu_sc0021630.1_g000002 Rmu_sc0022987.1_g000002 Rmu_sc0024469.1_g000005 Rmu_sc0033519.1_g000001 Rmu_sc0033519.1_g000002 Rmu_sc0033519.1_g000003 Rmu_sc0042775.1_g000001 Rmu_ssc0000110.1_g000003 Rmu_ssc0000110.1_g000004 Rmu_ssc0000126.1_g000068 Rmu_ssc0000200.1_g000007 Rmu_ssc0000295.1_g000003 Rmu_ssc0000295.1_g000004 Rmu_ssc0000299.1_g000010 Rmu_ssc0000308.1_g000024 Rmu_ssc0000339.1_g000006 Rmu_ssc0000385.1_g000012 Rmu_ssc0000409.1_g000004 Rmu_ssc0000421.1_g000004
rosa_roxburghii Rroxscaffold_156G00440360 Rroxscaffold_166G00440800 Rroxscaffold_1G00039040 Rroxscaffold_1G00039050 Rroxscaffold_1G00073950 Rroxscaffold_2G00091710 Rroxscaffold_2G00120050 Rroxscaffold_2G00122590 Rroxscaffold_3G00219700 Rroxscaffold_3G00264140 Rroxscaffold_4G00290600 Rroxscaffold_4G00323610 Rroxscaffold_4G00328460 Rroxscaffold_5G00343440 Rroxscaffold_5G00343570 Rroxscaffold_5G00378540 Rroxscaffold_5G00385090 Rroxscaffold_7G00169130 Rroxscaffold_7G00216420
rosa_rugosa Rorug01G0065800 Rorug01G0073500 Rorug01G0091700 Rorug01G0096500 Rorug01G0204700.1 Rorug01G0249100 Rorug01G0333800 Rorug01G0333900 Rorug01G0339500 Rorug01G0431300 Rorug02G0085400 Rorug02G0117500 Rorug02G0130900 Rorug02G0178800 Rorug02G0226700 Rorug02G0336300 Rorug02G0338700 Rorug02G0351400 Rorug02G0459900 Rorug03G0187000 Rorug03G0223700 Rorug03G0291300 Rorug03G0291300 Rorug03G0311100 Rorug03G0316900 Rorug03G0346000 Rorug04G0014500 Rorug04G0014600 Rorug04G0124100 Rorug04G0136500 Rorug04G0302000 Rorug04G0338100 Rorug04G0338200 Rorug04G0413100 Rorug05G0182200 Rorug05G0226500 Rorug05G0273300 Rorug05G0292200 Rorug05G0292200 Rorug05G0392500 Rorug05G0394500 Rorug05G0394600 Rorug05G0505600.1 Rorug06G0351400 Rorug06G0393400 Rorug06G0393600 Rorug06G0470000 Rorug07G0063100 Rorug07G0086800 Rorug07G0109200 Rorug07G0236100
rosa_samantha Rh1AG010800 Rh1AG011100 Rh1AG064900 Rh1AG088000 Rh1AG207100 Rh1AG262000 Rh1AG300800 Rh1BG043000 Rh1BG144600 Rh1BG180700 Rh1BG180800 Rh1BG328800 Rh1BG399400 Rh1CG041400 Rh1CG047300 Rh1CG379700 Rh1DG036500 Rh1DG083000 Rh1DG210700 Rh1DG210800 Rh1DG231100 Rh2AG007900 Rh2AG055500 Rh2AG339100 Rh2AG368100 Rh2BG243300 Rh2BG258900 Rh2BG292000 Rh2BG333500 Rh2BG387300 Rh2BG612800 Rh2BG619100 Rh2CG026500 Rh2CG163600 Rh2CG535700 Rh2DG186400 Rh2DG235000 Rh2DG314500 Rh2DG388500 Rh2DG391400 Rh2DG496900 Rh2DG526700 Rh2DG570700 Rh3AG330700 Rh3BG266900 Rh3CG236000 Rh3CG340400 Rh3DG090000 Rh3DG278400 Rh3DG297600 Rh3DG362600 Rh4AG001300 Rh4AG023300 Rh4AG097100 Rh4AG427000 Rh4BG029400 Rh4BG032400 Rh4BG086000 Rh4BG249200 Rh4CG001900 Rh4CG040600 Rh4CG093000 Rh4CG106300 Rh4CG113200 Rh4CG113900 Rh4DG002300 Rh4DG144400 Rh4DG234200 Rh5AG043700 Rh5AG084900 Rh5AG161500 Rh5AG409000 Rh5AG457200 Rh5AG457900 Rh5AG473700 Rh5AG520600 Rh5BG042100 Rh5BG124100 Rh5BG323500 Rh5BG417200 Rh5BG443700 Rh5BG451500 Rh5BG464900 Rh5BG470400 Rh5BG522500 Rh5CG068800 Rh5CG178300 Rh5CG231000 Rh5CG258600 Rh5CG394500 Rh5CG473700 Rh5DG164700 Rh5DG235400 Rh5DG261300 Rh5DG304900 Rh5DG334500 Rh5DG424300 Rh5DG458400 Rh5DG478600 Rh5DG552300 Rh5DG552700 Rh6AG037000 Rh6AG042100 Rh6AG255500 Rh6AG283400 Rh6AG291800 Rh6BG049600 Rh6BG080700 Rh6BG114600 Rh6BG128900 Rh6BG352500 Rh6CG052400 Rh6CG112900 Rh6CG113000 Rh6CG131300 Rh6CG157700 Rh6CG243200 Rh6CG254100 Rh6CG275700 Rh6CG299700 Rh6CG309100 Rh6CG317600 Rh6CG342600 Rh6CG471900 Rh6DG038200 Rh6DG102300 Rh6DG114400 Rh6DG225900 Rh6DG292900 Rh6DG320700 Rh6DG512800 Rh7AG217700 Rh7AG313900 Rh7AG446000 Rh7AG472600 Rh7BG223100 Rh7BG349900 Rh7BG352000 Rh7CG160200 Rh7CG233900 Rh7CG242700 Rh7CG273900 Rh7CG306400 Rh7CG322200 Rh7DG053800 Rh7DG077800 Rh7DG227700 Rh7DG404800
rosa_wichuraiana Rw0G003990 Rw2G022110 Rw2G024890 Rw6G005700 Rw7G008770

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 95
AasI GACNNNNNNGTC 1 cut(s) 881
Acc36I ACCTGC 4 cut(s) 95, 213, 745, 859
AccB7I CCANNNNNTGG 1 cut(s) 620
AccBSI CCGCTC 1 cut(s) 136
AccI GTMKAC 1 cut(s) 1750
AccII CGCG 1 cut(s) 887
AciI CCGC 3 cut(s) 136, 740, 1799
AclWI GGATC 5 cut(s) 105, 886, 899, 1458, 1471
AcoI YGGCCR 2 cut(s) 202, 757
AcsI RAATTY 6 cut(s) 346, 410, 605, 791, 1123, 1416
AcuI CTGAAG 2 cut(s) 597, 917
AcyI GRCGYC 1 cut(s) 298
AfaI GTAC 6 cut(s) 184, 934, 1066, 1119, 1797, 1960
AfiI CCNNNNNNNGG 3 cut(s) 620, 1259, 1829
AflIII ACRYGT 1 cut(s) 522
AgsI TTSAA 9 cut(s) 161, 232, 352, 443, 1085, 1159, 1396, 1760, 1976
AhdI GACNNNNNGTC 1 cut(s) 1033
AhlI ACTAGT 1 cut(s) 629
AjnI CCWGG 2 cut(s) 1480, 1520
AloI GAACNNNNNNTCC 2 cut(s) 764, 796
AluBI AGCT 4 cut(s) 237, 966, 1223, 1980
AluI AGCT 4 cut(s) 237, 966, 1223, 1980
Alw21I GWGCWC 2 cut(s) 239, 1204
Alw26I GTCTC 3 cut(s) 531, 807, 1862
AlwI GGATC 5 cut(s) 105, 886, 899, 1458, 1471
AlwNI CAGNNNCTG 2 cut(s) 451, 1186
Ama87I CYCGRG 2 cut(s) 12, 78
AoxI GGCC 4 cut(s) 202, 435, 757, 996
ApeKI GCWGC 8 cut(s) 272, 963, 1109, 1223, 1357, 1556, 1623, 1935
ApoI RAATTY 6 cut(s) 346, 410, 605, 791, 1123, 1416
AseI ATTAAT 1 cut(s) 477
Asp700I GAANNNNTTC 1 cut(s) 423
AspLEI GCGC 1 cut(s) 1692
AspS9I GGNCC 6 cut(s) 640, 903, 937, 1336, 1819, 1915
AsuHPI GGTGA 5 cut(s) 119, 944, 1436, 1799, 1823
AvaI CYCGRG 2 cut(s) 12, 78
AvaII GGWCC 6 cut(s) 640, 903, 937, 1336, 1819, 1915
AxyI CCTNAGG 3 cut(s) 363, 381, 1570
BalI TGGCCA 1 cut(s) 204
BamHI GGATCC 2 cut(s) 891, 1463
BanII GRGCYC 1 cut(s) 239
Bbv12I GWGCWC 2 cut(s) 239, 1204
BbvI GCAGC 8 cut(s) 259, 975, 1121, 1210, 1369, 1568, 1635, 1922
BccI CCATC 5 cut(s) 121, 563, 656, 1288, 1823
BceAI ACGGC 2 cut(s) 336, 422
BciT130I CCWGG 2 cut(s) 1482, 1522
BclI TGATCA 6 cut(s) 214, 397, 534, 1329, 1539, 1813
BcoDI GTCTC 3 cut(s) 531, 807, 1862
BcuI ACTAGT 1 cut(s) 629
BfaI CTAG 2 cut(s) 630, 1981
BfmI CTRYAG 1 cut(s) 1860
BfuAI ACCTGC 4 cut(s) 95, 213, 745, 859
BisI GCNGC 8 cut(s) 273, 964, 1110, 1224, 1358, 1557, 1624, 1936
BlpI GCTNAGC 2 cut(s) 1381, 1802
BlsI GCNGC 8 cut(s) 274, 965, 1111, 1225, 1359, 1558, 1625, 1937
Bme1390I CCNGG 2 cut(s) 1482, 1522
Bme18I GGWCC 6 cut(s) 640, 903, 937, 1336, 1819, 1915
BmeRI GACNNNNNGTC 1 cut(s) 1033
BmeT110I CYCGRG 2 cut(s) 12, 78
BmgT120I GGNCC 6 cut(s) 640, 903, 937, 1336, 1819, 1915
BmiI GGNNCC 8 cut(s) 642, 754, 893, 1003, 1337, 1465, 1821, 1917
BmrFI CCNGG 2 cut(s) 1482, 1522
BmsI GCATC 1 cut(s) 1235
BpmI CTGGAG 1 cut(s) 597
Bpu10I CCTNAGC 1 cut(s) 1012
Bpu1102I GCTNAGC 2 cut(s) 1381, 1802
BpuEI CTTGAG 2 cut(s) 243, 1076
BsaBI GATNNNNATC 1 cut(s) 96
BsaHI GRCGYC 1 cut(s) 298
BsaI GGTCTC 1 cut(s) 1862
BsaWI WCCGGW 1 cut(s) 1446
BsaXI ACNNNNNCTCC 6 cut(s) 764, 794, 1462, 1492, 1595, 1625
Bsc4I CCNNNNNNNGG 3 cut(s) 620, 1259, 1829
Bse1I ACTGG 4 cut(s) 456, 614, 1005, 1849
Bse21I CCTNAGG 3 cut(s) 363, 381, 1570
Bse3DI GCAATG 2 cut(s) 29, 1626
Bse8I GATNNNNATC 1 cut(s) 96
BseBI CCWGG 2 cut(s) 1482, 1522
BseGI GGATG 2 cut(s) 555, 1280
BseJI GATNNNNATC 1 cut(s) 96
BseLI CCNNNNNNNGG 3 cut(s) 620, 1259, 1829
BseMI GCAATG 2 cut(s) 29, 1626
BseMII CTCAG 6 cut(s) 372, 377, 423, 855, 1026, 1178
BseNI ACTGG 4 cut(s) 456, 614, 1005, 1849
BseRI GAGGAG 4 cut(s) 519, 825, 1729, 1880
BseX3I CGGCCG 1 cut(s) 757
BseXI GCAGC 8 cut(s) 259, 975, 1121, 1210, 1369, 1568, 1635, 1922
BsgI GTGCAG 1 cut(s) 825
Bsh1236I CGCG 1 cut(s) 887
Bsh1285I CGRYCG 2 cut(s) 760, 885
BshFI GGCC 4 cut(s) 204, 437, 759, 998
BsiEI CGRYCG 2 cut(s) 760, 885
BsiHKAI GWGCWC 2 cut(s) 239, 1204
BsiHKCI CYCGRG 2 cut(s) 12, 78
BsiSI CCGG 4 cut(s) 756, 760, 999, 1447
BslFI GGGAC 3 cut(s) 297, 1349, 1805
BslI CCNNNNNNNGG 3 cut(s) 620, 1259, 1829
BsmAI GTCTC 3 cut(s) 531, 807, 1862
BsmFI GGGAC 3 cut(s) 297, 1349, 1805
BsnI GGCC 4 cut(s) 204, 437, 759, 998
Bso31I GGTCTC 1 cut(s) 1862
BsoBI CYCGRG 2 cut(s) 12, 78
Bsp1286I GDGCHC 2 cut(s) 239, 1204
Bsp1720I GCTNAGC 2 cut(s) 1381, 1802
BspACI CCGC 3 cut(s) 136, 740, 1799
BspANI GGCC 4 cut(s) 204, 437, 759, 998
BspCNI CTCAG 6 cut(s) 373, 376, 424, 854, 1025, 1179
BspFNI CGCG 1 cut(s) 887
BspLI GGNNCC 8 cut(s) 642, 754, 893, 1003, 1337, 1465, 1821, 1917
BspMI ACCTGC 4 cut(s) 95, 213, 745, 859
BspPI GGATC 5 cut(s) 105, 886, 899, 1458, 1471
BspQI GCTCTTC 2 cut(s) 227, 1480
BspTNI GGTCTC 1 cut(s) 1862
BsrBI CCGCTC 1 cut(s) 136
BsrDI GCAATG 2 cut(s) 29, 1626
BsrI ACTGG 4 cut(s) 456, 614, 1005, 1849
BssNI GRCGYC 1 cut(s) 298
Bst2UI CCWGG 2 cut(s) 1482, 1522
Bst4CI ACNGT 6 cut(s) 649, 683, 883, 927, 1064, 1340
Bst6I CTCTTC 5 cut(s) 227, 699, 823, 1164, 1480
BstACI GRCGYC 1 cut(s) 298
BstC8I GCNNGC 3 cut(s) 565, 968, 1291
BstDEI CTNAG 9 cut(s) 363, 381, 432, 841, 1012, 1187, 1381, 1570, 1802
BstF5I GGATG 2 cut(s) 555, 1280
BstFNI CGCG 1 cut(s) 887
BstHHI GCGC 1 cut(s) 1692
BstMAI GTCTC 3 cut(s) 531, 807, 1862
BstMCI CGRYCG 2 cut(s) 760, 885
BstMWI GCNNNNNNNGC 2 cut(s) 1220, 1562
BstNI CCWGG 2 cut(s) 1482, 1522
BstNSI RCATGY 3 cut(s) 526, 1208, 1352
BstSCI CCNGG 2 cut(s) 1480, 1520
BstSFI CTRYAG 1 cut(s) 1860
BstUI CGCG 1 cut(s) 887
BstV1I GCAGC 8 cut(s) 259, 975, 1121, 1210, 1369, 1568, 1635, 1922
BstX2I RGATCY 3 cut(s) 97, 891, 1463
BstXI CCANNNNNNTGG 1 cut(s) 1880
BstYI RGATCY 3 cut(s) 97, 891, 1463
BstZI CGGCCG 1 cut(s) 757
Bsu36I CCTNAGG 3 cut(s) 363, 381, 1570
BsuRI GGCC 4 cut(s) 204, 437, 759, 998
BtsCI GGATG 2 cut(s) 555, 1280
BtsI GCAGTG 3 cut(s) 588, 1284, 1566
BtsIMutI CAGTG 9 cut(s) 429, 588, 688, 923, 1284, 1332, 1381, 1566, 1842
BveI ACCTGC 4 cut(s) 95, 213, 745, 859
Cac8I GCNNGC 3 cut(s) 565, 968, 1291
CaiI CAGNNNCTG 2 cut(s) 451, 1186
CfoI GCGC 1 cut(s) 1692
Cfr13I GGNCC 6 cut(s) 640, 903, 937, 1336, 1819, 1915
CseI GACGC 1 cut(s) 287
Csp6I GTAC 6 cut(s) 183, 933, 1065, 1118, 1796, 1959
CspCI CAANNNNNGTGG 2 cut(s) 105, 140
CviAII CATG 6 cut(s) 208, 523, 749, 1205, 1310, 1349
CviQI GTAC 6 cut(s) 183, 933, 1065, 1118, 1796, 1959
DdeI CTNAG 9 cut(s) 363, 381, 432, 841, 1012, 1187, 1381, 1570, 1802
DrdI GACNNNNNNGTC 1 cut(s) 881
DriI GACNNNNNGTC 1 cut(s) 1033
DseDI GACNNNNNNGTC 1 cut(s) 881
EaeI YGGCCR 2 cut(s) 202, 757
EagI CGGCCG 1 cut(s) 757
Eam1104I CTCTTC 5 cut(s) 227, 699, 823, 1164, 1480
Eam1105I GACNNNNNGTC 1 cut(s) 1033
EarI CTCTTC 5 cut(s) 227, 699, 823, 1164, 1480
Ecl136II GAGCTC 1 cut(s) 237
EclXI CGGCCG 1 cut(s) 757
Eco24I GRGCYC 1 cut(s) 239
Eco31I GGTCTC 1 cut(s) 1862
Eco47I GGWCC 6 cut(s) 640, 903, 937, 1336, 1819, 1915
Eco52I CGGCCG 1 cut(s) 757
Eco53kI GAGCTC 1 cut(s) 237
Eco57I CTGAAG 2 cut(s) 597, 917
Eco81I CCTNAGG 3 cut(s) 363, 381, 1570
Eco88I CYCGRG 2 cut(s) 12, 78
EcoICRI GAGCTC 1 cut(s) 237
EcoO109I RGGNCCY 3 cut(s) 640, 1819, 1915
EcoRI GAATTC 2 cut(s) 1123, 1416
EcoRII CCWGG 2 cut(s) 1480, 1520
EcoT22I ATGCAT 1 cut(s) 1459
EcoT38I GRGCYC 1 cut(s) 239
FaeI CATG 6 cut(s) 211, 526, 752, 1208, 1313, 1352
FalI AAGNNNNNCTT 2 cut(s) 1098, 1130
FaqI GGGAC 3 cut(s) 297, 1349, 1805
FatI CATG 6 cut(s) 207, 522, 748, 1204, 1309, 1348
FauI CCCGC 1 cut(s) 129
FauNDI CATATG 2 cut(s) 945, 1948
FbaI TGATCA 6 cut(s) 214, 397, 534, 1329, 1539, 1813
FblI GTMKAC 1 cut(s) 1750
Fnu4HI GCNGC 8 cut(s) 273, 964, 1110, 1224, 1358, 1557, 1624, 1936
FokI GGATG 2 cut(s) 542, 1267
FriOI GRGCYC 1 cut(s) 239
Fsp4HI GCNGC 8 cut(s) 273, 964, 1110, 1224, 1358, 1557, 1624, 1936
FspBI CTAG 2 cut(s) 630, 1981
GlaI GCGC 1 cut(s) 1691
GluI GCNGC 8 cut(s) 273, 964, 1110, 1224, 1358, 1557, 1624, 1936
GsuI CTGGAG 1 cut(s) 597
HaeIII GGCC 4 cut(s) 204, 437, 759, 998
HapII CCGG 4 cut(s) 756, 760, 999, 1447
HgaI GACGC 1 cut(s) 287
HhaI GCGC 1 cut(s) 1692
Hin1I GRCGYC 1 cut(s) 298
Hin1II CATG 6 cut(s) 211, 526, 752, 1208, 1313, 1352
Hin6I GCGC 1 cut(s) 1690
HinP1I GCGC 1 cut(s) 1690
HincII GTYRAC 4 cut(s) 493, 589, 679, 874
HindII GTYRAC 4 cut(s) 493, 589, 679, 874
HinfI GANTC 7 cut(s) 81, 815, 949, 1034, 1137, 1371, 1682
HpaII CCGG 4 cut(s) 756, 760, 999, 1447
HphI GGTGA 5 cut(s) 119, 944, 1436, 1799, 1823
Hpy188III TCNNGA 8 cut(s) 85, 229, 260, 302, 895, 1501, 1696, 1973
Hpy99I CGWCG 1 cut(s) 1031
HpyAV CCTTC 4 cut(s) 129, 190, 1585, 1594
HpyCH4III ACNGT 6 cut(s) 649, 683, 883, 927, 1064, 1340
HpyCH4IV ACGT 1 cut(s) 1020
HpyF10VI GCNNNNNNNGC 2 cut(s) 1220, 1562
HpyF3I CTNAG 9 cut(s) 363, 381, 432, 841, 1012, 1187, 1381, 1570, 1802
HpySE526I ACGT 1 cut(s) 1020
Hsp92I GRCGYC 1 cut(s) 298
Hsp92II CATG 6 cut(s) 211, 526, 752, 1208, 1313, 1352
HspAI GCGC 1 cut(s) 1690
Ksp22I TGATCA 6 cut(s) 214, 397, 534, 1329, 1539, 1813
LguI GCTCTTC 2 cut(s) 227, 1480
LmnI GCTCC 3 cut(s) 133, 616, 758
Lsp1109I GCAGC 8 cut(s) 259, 975, 1121, 1210, 1369, 1568, 1635, 1922
LweI GCATC 1 cut(s) 1235
MaeI CTAG 2 cut(s) 630, 1981
MaeII ACGT 1 cut(s) 1020
MaeIII GTNAC 4 cut(s) 107, 742, 950, 1340
MbiI CCGCTC 1 cut(s) 136
MflI RGATCY 3 cut(s) 97, 891, 1463
MhlI GDGCHC 2 cut(s) 239, 1204
MlsI TGGCCA 1 cut(s) 204
MluNI TGGCCA 1 cut(s) 204
MlyI GAGTC 5 cut(s) 90, 809, 958, 1043, 1380
MmeI TCCRAC 7 cut(s) 601, 807, 834, 852, 1079, 1225, 1491
Mox20I TGGCCA 1 cut(s) 204
Mph1103I ATGCAT 1 cut(s) 1459
MroXI GAANNNNTTC 1 cut(s) 423
MscI TGGCCA 1 cut(s) 204
MseI TTAA 2 cut(s) 477, 1838
MslI CAYNNNNRTG 1 cut(s) 1547
Msp20I TGGCCA 1 cut(s) 204
MspI CCGG 4 cut(s) 756, 760, 999, 1447
MspR9I CCNGG 2 cut(s) 1482, 1522
MvaI CCWGG 2 cut(s) 1482, 1522
MvnI CGCG 1 cut(s) 887
MwoI GCNNNNNNNGC 2 cut(s) 1220, 1562
NdeI CATATG 2 cut(s) 945, 1948
NlaIII CATG 6 cut(s) 211, 526, 752, 1208, 1313, 1352
NlaIV GGNNCC 8 cut(s) 642, 754, 893, 1003, 1337, 1465, 1821, 1917
NmuCI GTSAC 3 cut(s) 107, 950, 1340
NsiI ATGCAT 1 cut(s) 1459
NspI RCATGY 3 cut(s) 526, 1208, 1352
PaeR7I CTCGAG 1 cut(s) 78
PaqCI CACCTGC 1 cut(s) 95
PciI ACATGT 1 cut(s) 522
PciSI GCTCTTC 2 cut(s) 227, 1480
PcsI WCGNNNNNNNCGW 4 cut(s) 295, 1026, 1093, 1138
PdmI GAANNNNTTC 1 cut(s) 423
PfeI GAWTC 2 cut(s) 1137, 1682
PflMI CCANNNNNTGG 1 cut(s) 620
PfoI TCCNGGA 1 cut(s) 1480
PkrI GCNGC 8 cut(s) 274, 965, 1111, 1225, 1359, 1558, 1625, 1937
PleI GAGTC 5 cut(s) 89, 809, 957, 1042, 1379
PpsI GAGTC 5 cut(s) 89, 809, 957, 1042, 1379
PpuMI RGGWCCY 3 cut(s) 640, 1819, 1915
PscI ACATGT 1 cut(s) 522
PshBI ATTAAT 1 cut(s) 477
Psp124BI GAGCTC 1 cut(s) 239
Psp5II RGGWCCY 3 cut(s) 640, 1819, 1915
Psp6I CCWGG 2 cut(s) 1480, 1520
PspGI CCWGG 2 cut(s) 1480, 1520
PspN4I GGNNCC 8 cut(s) 642, 754, 893, 1003, 1337, 1465, 1821, 1917
PspPI GGNCC 6 cut(s) 640, 903, 937, 1336, 1819, 1915
PspPPI RGGWCCY 3 cut(s) 640, 1819, 1915
PspXI VCTCGAGB 1 cut(s) 78
PsrI GAACNNNNNNTAC 2 cut(s) 408, 440
PstNI CAGNNNCTG 2 cut(s) 451, 1186
PsuI RGATCY 3 cut(s) 97, 891, 1463
RsaI GTAC 6 cut(s) 184, 934, 1066, 1119, 1797, 1960
RsaNI GTAC 6 cut(s) 183, 933, 1065, 1118, 1796, 1959
RseI CAYNNNNRTG 1 cut(s) 1547
SacI GAGCTC 1 cut(s) 239
SapI GCTCTTC 2 cut(s) 227, 1480
SaqAI TTAA 2 cut(s) 477, 1838
SatI GCNGC 8 cut(s) 273, 964, 1110, 1224, 1358, 1557, 1624, 1936
Sau96I GGNCC 6 cut(s) 640, 903, 937, 1336, 1819, 1915
SchI GAGTC 5 cut(s) 90, 809, 958, 1043, 1380
ScrFI CCNGG 2 cut(s) 1482, 1522
SduI GDGCHC 2 cut(s) 239, 1204
SfaNI GCATC 1 cut(s) 1235
SfcI CTRYAG 1 cut(s) 1860
Sfr274I CTCGAG 1 cut(s) 78
SinI GGWCC 6 cut(s) 640, 903, 937, 1336, 1819, 1915
SlaI CTCGAG 1 cut(s) 78
SmiMI CAYNNNNRTG 1 cut(s) 1547
SmlI CTYRAG 3 cut(s) 78, 258, 1091
SmoI CTYRAG 3 cut(s) 78, 258, 1091
SpeI ACTAGT 1 cut(s) 629
SsiI CCGC 3 cut(s) 136, 740, 1799
SspMI CTAG 2 cut(s) 630, 1981
SstI GAGCTC 1 cut(s) 239
StyD4I CCNGG 2 cut(s) 1480, 1520
TaaI ACNGT 6 cut(s) 649, 683, 883, 927, 1064, 1340
TaiI ACGT 1 cut(s) 1023
TaqI TCGA 1 cut(s) 79
TaqII GACCGA 1 cut(s) 990
TatI WGTACW 2 cut(s) 182, 1117
TfiI GAWTC 2 cut(s) 1137, 1682
Tru1I TTAA 2 cut(s) 477, 1838
Tru9I TTAA 2 cut(s) 477, 1838
TscAI CASTG 9 cut(s) 436, 588, 688, 930, 1291, 1332, 1381, 1566, 1849
TseFI GTSAC 3 cut(s) 107, 950, 1340
TseI GCWGC 8 cut(s) 272, 963, 1109, 1223, 1357, 1556, 1623, 1935
Tsp45I GTSAC 3 cut(s) 107, 950, 1340
TspDTI ATGAA 9 cut(s) 495, 618, 687, 705, 717, 1073, 1604, 1613, 1695
TspGWI ACGGA 1 cut(s) 950
TspRI CASTG 9 cut(s) 436, 588, 688, 930, 1291, 1332, 1381, 1566, 1849
Van91I CCANNNNNTGG 1 cut(s) 620
VpaK11BI GGWCC 6 cut(s) 640, 903, 937, 1336, 1819, 1915
VspI ATTAAT 1 cut(s) 477
XapI RAATTY 6 cut(s) 346, 410, 605, 791, 1123, 1416
XceI RCATGY 3 cut(s) 526, 1208, 1352
XhoI CTCGAG 1 cut(s) 78
XmiI GTMKAC 1 cut(s) 1750
XmnI GAANNNNTTC 1 cut(s) 423
XspI CTAG 2 cut(s) 630, 1981
Zsp2I ATGCAT 1 cut(s) 1459
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.