Rh4DG234200

Domain of unknown function (DUF4283)

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4D
Physical Location & Seq
Forward (+)
44118489 .. 44125050
6562 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh4DG234200.1

Sequence Viewer

Length: 1449 bp
ATGCCTTCCATGAGTTCTGGTGCATCACCTGGGATTTCTGTTTGTCCTTGGGAGTTCATGGGCGGCCTCGACGCGGCCTTGCCTTCTCCTCCACCAGCCCCAAAGGCACGCACCTTTGCATCAGTTCTTTCCAACTCGATTGAATCTTCAATTCCTCTTAGTCAATTACCTGCTCCTGTCGTTCGAGGGGATAAAATCTATGTTAAGATCAATGAATCCCTATATCAAGAGCAATTGCAGAATTTTAAAACCAACCTTATTGGTCGATTATTGCTACGAAAGGGTTCAACACCACTAACGACTGCTACCCTGAAGGGATTGCTTGCTGCTCTATGGCGCCCTTCAGAGCCATGGCGTTTGGTTCCTCTTGGTAAGGGTTACTTTGACATCCATTTTGCCACAGAAGAAGACCTTCGTAGGGTTTGGGGTGGAGGTACTTGTACCCTCCCTGATGGAATTTTTCGTCTAACGCAATGGAAGCCAGACTTCGTCCCGGGCGATACTCTTCCACAGACACATGCCCAAGTTTGGGTCAGATTATATGGTTTGAGTCAGGATTATTGGCATCAGCAACATCTAATGGAGATTTCTAGGGGTGTGGGCACTCCATTGCAGATTGATAAAGCTACAAAAGAGCGGCAATTCGGGTATTTTGCTCGAGTCTTGGTAGACGTGGATCTCGCTGGTGAATTACCTTCGTCTTTGATGGTTGAGAGGGAGACTCATTGCTTCCCCATTGAAATTGTTTATGAGAATTTGTGTACTCATTGTGGGATGGTCGGTCACATGGCTGATCACTGCAAACATTTGAAAGGTTCCAATATGGTGCCCAATGCTCAAGGGAAAAAACTTGTGCAGAAATTTGATCGTGACTTACGTCAAGAGTATCGACCCAAGCAGGCTTCCAACAAGAACATTGTTTCTGATCACCAAAATAAGACTATTCCACCAGCGCCTCCTGTTCATGAGGTGGTTCCGACGTCAACAGAACCGATTGTTGTTCCTACCGAAAACCATTCGGGAGAACATAGAATTCAAACCAATATTGGTGCCTCTTCTGATACTACTGATTGTGCAGTGGCCCAACTGGCGCAATCGGTTATTGAAGAGGCGGTTATGGAGGAGTTGGATGCCATTGCTCAACGTGTTGTGGATGAGCCTTCTAACCAATTGCTTTTACAAAACACTAGTATGGAGGAGTGTGAGGATGATTCTAGCTCTAATGAGGCTGAGGAGCCGGAACCAGTTGTTCATGCGTTGGTGCCTTATAACTCAAGTGGTCAAGATTGGAATGATCTGATTGAGGAGGACCAAATTCCTACTCGAGCAATGTACATTCGATACAATTCTAGCTCAGATGTACTGAAAAGTTGTGATGCCATTAACATATTCATACTTAGATTAGCATTCATCAATCCAGACCAAAAGCAAAACAAAAACAAAGATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

482

Amino Acids

53.68

Weight (kDa)

5.32

Isoelectric Point (pI)

56.45

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF4283 PF14111 80 - 165 1.6e-06 Domain of unknown function (DUF4283)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000044)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G07760 AT5G28823
fragaria_vesca FvH4_1g13572 FvH4_2g03281 FvH4_2g04691 FvH4_2g08332 FvH4_2g08333 FvH4_2g15313 FvH4_2g26101 FvH4_2g29541 FvH4_3g06911 FvH4_3g34351 FvH4_3g43733 FvH4_4g02432 FvH4_4g05601 FvH4_4g08213 FvH4_4g09961 FvH4_4g10131 FvH4_4g20001 FvH4_4g20002 FvH4_5g01051 FvH4_5g01401 FvH4_5g27943 FvH4_6g09220 FvH4_6g17383 FvH4_6g35491 FvH4_6g46421 FvH4_7g04151 FvH4_7g13962 FvH4_7g18611 FvH4_7g19491 FvH4_7g19511 FvH4_7g26562
malus_domestica MD06G1221600.v1.1
pyrus_communis pycom10g21150
rosa_chinensis RchiOBHm_Chr1g0337571 RchiOBHm_Chr2g0168771 RchiOBHm_Chr3g0453631 RchiOBHm_Chr6g0278581
rosa_laevigata RLG00000001899 RLG00000001925 RLG00000002026 RLG00000003410 RLG00000003767 RLG00000004304 RLG00000004473 RLG00000004677 RLG00000006856 RLG00000007994 RLG00000009888 RLG00000011627 RLG00000012174 RLG00000012217 RLG00000013118 RLG00000013736 RLG00000014194 RLG00000014251 RLG00000015011 RLG00000015057 RLG00000015235 RLG00000017416 RLG00000018052 RLG00000018537 RLG00000019968 RLG00000020096 RLG00000020263 RLG00000022606 RLG00000023119 RLG00000028111 RLG00000029686 RLG00000030126 RLG00000031124 RLG00000031236 RLG00000032766 RLG00000033171 RLG00000033548 RLG00000033987 RLG00000034062 RLG00000035115 RLG00000035863
rosa_multiflora Rmu_co8036712.1_g000001 Rmu_co8080248.1_g000001 Rmu_co8208334.1_g000001 Rmu_co8253451.1_g000001 Rmu_co8393241.1_g000001 Rmu_co8522225.1_g000005 Rmu_sc0000060.1_g000030 Rmu_sc0000060.1_g000031 Rmu_sc0000060.1_g000032 Rmu_sc0000090.1_g000008 Rmu_sc0000149.1_g000051 Rmu_sc0000149.1_g000058 Rmu_sc0000309.1_g000050 Rmu_sc0000370.1_g000022 Rmu_sc0000370.1_g000023 Rmu_sc0000370.1_g000024 Rmu_sc0000418.1_g000018 Rmu_sc0000427.1_g000014 Rmu_sc0000427.1_g000015 Rmu_sc0000434.1_g000008 Rmu_sc0000487.1_g000038 Rmu_sc0000487.1_g000039 Rmu_sc0000569.1_g000029 Rmu_sc0000580.1_g000097 Rmu_sc0000595.1_g000068 Rmu_sc0000607.1_g000027 Rmu_sc0000738.1_g000004 Rmu_sc0000758.1_g000001 Rmu_sc0000758.1_g000002 Rmu_sc0000870.1_g000019 Rmu_sc0000924.1_g000040 Rmu_sc0000924.1_g000041 Rmu_sc0000999.1_g000037 Rmu_sc0001001.1_g000001 Rmu_sc0001010.1_g000080 Rmu_sc0001075.1_g000041 Rmu_sc0001097.1_g000016 Rmu_sc0001173.1_g000020 Rmu_sc0001258.1_g000010 Rmu_sc0001425.1_g000031 Rmu_sc0001493.1_g000020 Rmu_sc0001493.1_g000021 Rmu_sc0001644.1_g000024 Rmu_sc0001648.1_g000039 Rmu_sc0001662.1_g000002 Rmu_sc0001849.1_g000046 Rmu_sc0001851.1_g000038 Rmu_sc0001861.1_g000006 Rmu_sc0001899.1_g000008 Rmu_sc0002231.1_g000023 Rmu_sc0002393.1_g000012 Rmu_sc0002515.1_g000010 Rmu_sc0002551.1_g000013 Rmu_sc0002680.1_g000029 Rmu_sc0002700.1_g000030 Rmu_sc0002700.1_g000031 Rmu_sc0002709.1_g000035 Rmu_sc0002779.1_g000017 Rmu_sc0003267.1_g000040 Rmu_sc0003306.1_g000009 Rmu_sc0003338.1_g000014 Rmu_sc0003522.1_g000038 Rmu_sc0003522.1_g000039 Rmu_sc0003653.1_g000031 Rmu_sc0003901.1_g000003 Rmu_sc0003920.1_g000009 Rmu_sc0004014.1_g000009 Rmu_sc0004016.1_g000013 Rmu_sc0004031.1_g000002 Rmu_sc0004106.1_g000001 Rmu_sc0004432.1_g000004 Rmu_sc0004481.1_g000020 Rmu_sc0004874.1_g000005 Rmu_sc0004928.1_g000005 Rmu_sc0005065.1_g000053 Rmu_sc0005091.1_g000005 Rmu_sc0005217.1_g000015 Rmu_sc0005242.1_g000002 Rmu_sc0005300.1_g000011 Rmu_sc0005400.1_g000004 Rmu_sc0005486.1_g000007 Rmu_sc0005527.1_g000015 Rmu_sc0006059.1_g000021 Rmu_sc0006087.1_g000004 Rmu_sc0006184.1_g000006 Rmu_sc0006184.1_g000007 Rmu_sc0006578.1_g000006 Rmu_sc0006730.1_g000010 Rmu_sc0006736.1_g000030 Rmu_sc0006736.1_g000033 Rmu_sc0007333.1_g000018 Rmu_sc0007856.1_g000010 Rmu_sc0008231.1_g000003 Rmu_sc0009862.1_g000012 Rmu_sc0010547.1_g000001 Rmu_sc0010547.1_g000003 Rmu_sc0010632.1_g000012 Rmu_sc0010747.1_g000008 Rmu_sc0011075.1_g000009 Rmu_sc0011565.1_g000004 Rmu_sc0011641.1_g000003 Rmu_sc0013102.1_g000013 Rmu_sc0013160.1_g000006 Rmu_sc0014846.1_g000004 Rmu_sc0017037.1_g000003 Rmu_sc0018203.1_g000001 Rmu_sc0018204.1_g000001 Rmu_sc0018348.1_g000001 Rmu_sc0019354.1_g000002 Rmu_sc0021630.1_g000002 Rmu_sc0022987.1_g000002 Rmu_sc0024469.1_g000005 Rmu_sc0033519.1_g000001 Rmu_sc0033519.1_g000002 Rmu_sc0033519.1_g000003 Rmu_sc0042775.1_g000001 Rmu_ssc0000110.1_g000003 Rmu_ssc0000110.1_g000004 Rmu_ssc0000126.1_g000068 Rmu_ssc0000200.1_g000007 Rmu_ssc0000295.1_g000003 Rmu_ssc0000295.1_g000004 Rmu_ssc0000299.1_g000010 Rmu_ssc0000308.1_g000024 Rmu_ssc0000339.1_g000006 Rmu_ssc0000385.1_g000012 Rmu_ssc0000409.1_g000004 Rmu_ssc0000421.1_g000004
rosa_roxburghii Rroxscaffold_156G00440360 Rroxscaffold_166G00440800 Rroxscaffold_1G00039040 Rroxscaffold_1G00039050 Rroxscaffold_1G00073950 Rroxscaffold_2G00091710 Rroxscaffold_2G00120050 Rroxscaffold_2G00122590 Rroxscaffold_3G00219700 Rroxscaffold_3G00264140 Rroxscaffold_4G00290600 Rroxscaffold_4G00323610 Rroxscaffold_4G00328460 Rroxscaffold_5G00343440 Rroxscaffold_5G00343570 Rroxscaffold_5G00378540 Rroxscaffold_5G00385090 Rroxscaffold_7G00169130 Rroxscaffold_7G00216420
rosa_rugosa Rorug01G0065800 Rorug01G0073500 Rorug01G0091700 Rorug01G0096500 Rorug01G0204700.1 Rorug01G0249100 Rorug01G0333800 Rorug01G0333900 Rorug01G0339500 Rorug01G0431300 Rorug02G0085400 Rorug02G0117500 Rorug02G0130900 Rorug02G0178800 Rorug02G0226700 Rorug02G0336300 Rorug02G0338700 Rorug02G0351400 Rorug02G0459900 Rorug03G0187000 Rorug03G0223700 Rorug03G0291300 Rorug03G0291300 Rorug03G0311100 Rorug03G0316900 Rorug03G0346000 Rorug04G0014500 Rorug04G0014600 Rorug04G0124100 Rorug04G0136500 Rorug04G0302000 Rorug04G0338100 Rorug04G0338200 Rorug04G0413100 Rorug05G0182200 Rorug05G0226500 Rorug05G0273300 Rorug05G0292200 Rorug05G0292200 Rorug05G0392500 Rorug05G0394500 Rorug05G0394600 Rorug05G0505600.1 Rorug06G0351400 Rorug06G0393400 Rorug06G0393600 Rorug06G0470000 Rorug07G0063100 Rorug07G0086800 Rorug07G0109200 Rorug07G0236100
rosa_samantha Rh1AG010800 Rh1AG011100 Rh1AG064900 Rh1AG088000 Rh1AG207100 Rh1AG262000 Rh1AG300800 Rh1BG043000 Rh1BG144600 Rh1BG180700 Rh1BG180800 Rh1BG328800 Rh1BG399400 Rh1CG041400 Rh1CG047300 Rh1CG379700 Rh1DG036500 Rh1DG083000 Rh1DG210700 Rh1DG210800 Rh1DG231100 Rh2AG007900 Rh2AG055500 Rh2AG339100 Rh2AG368100 Rh2BG243300 Rh2BG258900 Rh2BG292000 Rh2BG333500 Rh2BG387300 Rh2BG612800 Rh2BG619100 Rh2CG026500 Rh2CG163600 Rh2CG535700 Rh2DG186400 Rh2DG235000 Rh2DG314500 Rh2DG388500 Rh2DG391400 Rh2DG496900 Rh2DG526700 Rh2DG570700 Rh3AG330700 Rh3BG266900 Rh3CG236000 Rh3CG340400 Rh3DG090000 Rh3DG278400 Rh3DG297600 Rh3DG362600 Rh4AG001300 Rh4AG023300 Rh4AG097100 Rh4AG427000 Rh4BG029400 Rh4BG032400 Rh4BG086000 Rh4BG249200 Rh4CG001900 Rh4CG040600 Rh4CG093000 Rh4CG106300 Rh4CG113200 Rh4CG113900 Rh4DG002300 Rh4DG144400 Rh4DG234200 Rh5AG043700 Rh5AG084900 Rh5AG161500 Rh5AG409000 Rh5AG457200 Rh5AG457900 Rh5AG473700 Rh5AG520600 Rh5BG042100 Rh5BG124100 Rh5BG323500 Rh5BG417200 Rh5BG443700 Rh5BG451500 Rh5BG464900 Rh5BG470400 Rh5BG522500 Rh5CG068800 Rh5CG178300 Rh5CG231000 Rh5CG258600 Rh5CG394500 Rh5CG473700 Rh5DG164700 Rh5DG235400 Rh5DG261300 Rh5DG304900 Rh5DG334500 Rh5DG424300 Rh5DG458400 Rh5DG478600 Rh5DG552300 Rh5DG552700 Rh6AG037000 Rh6AG042100 Rh6AG255500 Rh6AG283400 Rh6AG291800 Rh6BG049600 Rh6BG080700 Rh6BG114600 Rh6BG128900 Rh6BG352500 Rh6CG052400 Rh6CG112900 Rh6CG113000 Rh6CG131300 Rh6CG157700 Rh6CG243200 Rh6CG254100 Rh6CG275700 Rh6CG299700 Rh6CG309100 Rh6CG317600 Rh6CG342600 Rh6CG471900 Rh6DG038200 Rh6DG102300 Rh6DG114400 Rh6DG225900 Rh6DG292900 Rh6DG320700 Rh6DG512800 Rh7AG217700 Rh7AG313900 Rh7AG446000 Rh7AG472600 Rh7BG223100 Rh7BG349900 Rh7BG352000 Rh7CG160200 Rh7CG233900 Rh7CG242700 Rh7CG273900 Rh7CG306400 Rh7CG322200 Rh7DG053800 Rh7DG077800 Rh7DG227700 Rh7DG404800
rosa_wichuraiana Rw0G003990 Rw2G022110 Rw2G024890 Rw6G005700 Rw7G008770

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1269
AatII GACGTC 1 cut(s) 983
Acc36I ACCTGC 1 cut(s) 178
AccB1I GGYRCC 4 cut(s) 336, 826, 1049, 1261
AccBSI CCGCTC 1 cut(s) 637
AccI GTMKAC 1 cut(s) 669
AccII CGCG 1 cut(s) 74
AciI CCGC 4 cut(s) 63, 74, 637, 1112
AclWI GGATC 1 cut(s) 684
AcsI RAATTY 6 cut(s) 241, 456, 754, 860, 1032, 1314
AcuI CTGAAG 2 cut(s) 327, 332
AcyI GRCGYC 2 cut(s) 337, 980
AfaI GTAC 5 cut(s) 436, 442, 763, 1334, 1362
AfiI CCNNNNNNNGG 4 cut(s) 73, 418, 528, 529
AflIII ACRYGT 1 cut(s) 1144
AgsI TTSAA 7 cut(s) 143, 150, 288, 740, 811, 1037, 1106
AhlI ACTAGT 1 cut(s) 1187
AjiI CACGTC 1 cut(s) 673
AjnI CCWGG 1 cut(s) 28
AluBI AGCT 3 cut(s) 626, 1218, 1353
AluI AGCT 3 cut(s) 626, 1218, 1353
Alw26I GTCTC 1 cut(s) 713
AlwI GGATC 1 cut(s) 684
Ama87I CYCGRG 3 cut(s) 493, 657, 1323
AoxI GGCC 3 cut(s) 64, 75, 1080
ApeKI GCWGC 1 cut(s) 326
ApoI RAATTY 6 cut(s) 241, 456, 754, 860, 1032, 1314
ArsI GACNNNNNNTTYG 2 cut(s) 377, 409
Asp700I GAANNNNTTC 2 cut(s) 283, 411
AspLEI GCGC 3 cut(s) 339, 955, 1093
AspS9I GGNCC 2 cut(s) 1081, 1309
AsuC2I CCSGG 2 cut(s) 494, 495
AsuHPI GGTGA 3 cut(s) 18, 698, 920
AvaI CYCGRG 3 cut(s) 493, 657, 1323
AvaII GGWCC 1 cut(s) 1309
BaeGI GKGCMC 2 cut(s) 605, 831
BanI GGYRCC 4 cut(s) 336, 826, 1049, 1261
BbsI GAAGAC 1 cut(s) 414
BbvCI CCTCAGC 1 cut(s) 1230
BbvI GCAGC 1 cut(s) 313
BccI CCATC 3 cut(s) 446, 700, 769
BciT130I CCWGG 1 cut(s) 30
BclI TGATCA 2 cut(s) 793, 925
BcnI CCSGG 2 cut(s) 494, 495
BcoDI GTCTC 1 cut(s) 713
BcuI ACTAGT 1 cut(s) 1187
BfaI CTAG 4 cut(s) 591, 1188, 1215, 1350
BfoI RGCGCY 2 cut(s) 340, 956
BfuAI ACCTGC 1 cut(s) 178
BglI GCCNNNNNGGC 2 cut(s) 104, 1088
BisI GCNGC 4 cut(s) 64, 75, 327, 638
BlsI GCNGC 4 cut(s) 65, 76, 328, 639
Bme1390I CCNGG 3 cut(s) 30, 494, 495
Bme18I GGWCC 1 cut(s) 1309
BmeT110I CYCGRG 3 cut(s) 493, 657, 1323
BmgBI CACGTC 1 cut(s) 673
BmgT120I GGNCC 2 cut(s) 1081, 1309
BmiI GGNNCC 9 cut(s) 338, 363, 817, 828, 975, 1051, 1236, 1242, 1263
BmrFI CCNGG 3 cut(s) 30, 494, 495
BmsI GCATC 5 cut(s) 32, 128, 574, 1120, 1366
BoxI GACNNNNGTC 1 cut(s) 876
BpiI GAAGAC 1 cut(s) 414
BplI GAGNNNNNCTC 2 cut(s) 706, 738
Bpu10I CCTNAGC 1 cut(s) 1230
BpuEI CTTGAG 2 cut(s) 822, 1258
BpuMI CCSGG 2 cut(s) 494, 495
BsaHI GRCGYC 2 cut(s) 337, 980
BsaJI CCNNGG 4 cut(s) 29, 47, 350, 493
Bsc4I CCNNNNNNNGG 4 cut(s) 73, 418, 528, 529
Bse1I ACTGG 2 cut(s) 1092, 1244
Bse3DI GCAATG 5 cut(s) 479, 608, 724, 1134, 1335
BseBI CCWGG 1 cut(s) 30
BseDI CCNNGG 4 cut(s) 29, 47, 350, 493
BseGI GGATG 5 cut(s) 387, 780, 1135, 1159, 1213
BseLI CCNNNNNNNGG 4 cut(s) 73, 418, 528, 529
BseMI GCAATG 5 cut(s) 479, 608, 724, 1134, 1335
BseMII CTCAG 2 cut(s) 1221, 1368
BseNI ACTGG 2 cut(s) 1092, 1244
BseRI GAGGAG 5 cut(s) 78, 1136, 1211, 1247, 1319
BseSI GKGCMC 2 cut(s) 605, 831
BseXI GCAGC 1 cut(s) 313
BsgI GTGCAG 2 cut(s) 875, 1095
Bsh1236I CGCG 1 cut(s) 74
BshFI GGCC 3 cut(s) 66, 77, 1082
BshNI GGYRCC 4 cut(s) 336, 826, 1049, 1261
BsiHKCI CYCGRG 3 cut(s) 493, 657, 1323
BsiSI CCGG 2 cut(s) 494, 1238
BslFI GGGAC 1 cut(s) 476
BslI CCNNNNNNNGG 4 cut(s) 73, 418, 528, 529
BsmAI GTCTC 1 cut(s) 713
BsmFI GGGAC 1 cut(s) 476
BsmI GAATGC 1 cut(s) 1406
BsnI GGCC 3 cut(s) 66, 77, 1082
BsoBI CYCGRG 3 cut(s) 493, 657, 1323
Bsp1286I GDGCHC 2 cut(s) 605, 831
Bsp1407I TGTACA 1 cut(s) 1332
Bsp143I GATC 6 cut(s) 207, 676, 793, 865, 925, 1294
Bsp19I CCATGG 1 cut(s) 350
BspACI CCGC 4 cut(s) 63, 74, 637, 1112
BspANI GGCC 3 cut(s) 66, 77, 1082
BspCNI CTCAG 2 cut(s) 1222, 1367
BspFNI CGCG 1 cut(s) 74
BspHI TCATGA 1 cut(s) 964
BspLI GGNNCC 9 cut(s) 338, 363, 817, 828, 975, 1051, 1236, 1242, 1263
BspMI ACCTGC 1 cut(s) 178
BspPI GGATC 1 cut(s) 684
BspT107I GGYRCC 4 cut(s) 336, 826, 1049, 1261
BsrBI CCGCTC 1 cut(s) 637
BsrDI GCAATG 5 cut(s) 479, 608, 724, 1134, 1335
BsrGI TGTACA 1 cut(s) 1332
BsrI ACTGG 2 cut(s) 1092, 1244
BssECI CCNNGG 4 cut(s) 29, 47, 350, 493
BssMI GATC 6 cut(s) 207, 676, 793, 865, 925, 1294
BssNI GRCGYC 2 cut(s) 337, 980
BssT1I CCWWGG 2 cut(s) 47, 350
Bst2UI CCWGG 1 cut(s) 30
Bst6I CTCTTC 3 cut(s) 510, 1060, 1101
BstACI GRCGYC 2 cut(s) 337, 980
BstAUI TGTACA 1 cut(s) 1332
BstC8I GCNNGC 3 cut(s) 109, 324, 900
BstDEI CTNAG 4 cut(s) 158, 1230, 1354, 1397
BstDSI CCRYGG 1 cut(s) 350
BstF5I GGATG 5 cut(s) 387, 780, 1135, 1159, 1213
BstFNI CGCG 1 cut(s) 74
BstH2I RGCGCY 2 cut(s) 340, 956
BstHHI GCGC 3 cut(s) 339, 955, 1093
BstKTI GATC 6 cut(s) 210, 679, 796, 868, 928, 1297
BstMAI GTCTC 1 cut(s) 713
BstMBI GATC 6 cut(s) 207, 676, 793, 865, 925, 1294
BstMWI GCNNNNNNNGC 3 cut(s) 104, 478, 1088
BstNI CCWGG 1 cut(s) 30
BstNSI RCATGY 1 cut(s) 521
BstPAI GACNNNNGTC 1 cut(s) 876
BstSCI CCNGG 3 cut(s) 28, 492, 493
BstSLI GKGCMC 2 cut(s) 605, 831
BstUI CGCG 1 cut(s) 74
BstV1I GCAGC 1 cut(s) 313
BstV2I GAAGAC 1 cut(s) 414
BstX2I RGATCY 1 cut(s) 676
BstYI RGATCY 1 cut(s) 676
BsuRI GGCC 3 cut(s) 66, 77, 1082
BtgI CCRYGG 1 cut(s) 350
BtrI CACGTC 1 cut(s) 673
BtsCI GGATG 5 cut(s) 387, 780, 1135, 1159, 1213
BtsI GCAGTG 2 cut(s) 796, 1083
BtsIMutI CAGTG 2 cut(s) 796, 1083
BveI ACCTGC 1 cut(s) 178
Cac8I GCNNGC 3 cut(s) 109, 324, 900
CciI TCATGA 1 cut(s) 964
CfoI GCGC 3 cut(s) 339, 955, 1093
Cfr13I GGNCC 2 cut(s) 1081, 1309
Cfr9I CCCGGG 1 cut(s) 493
CseI GACGC 1 cut(s) 80
Csp6I GTAC 5 cut(s) 435, 441, 762, 1333, 1361
CviAII CATG 7 cut(s) 10, 58, 351, 518, 787, 965, 1253
CviQI GTAC 5 cut(s) 435, 441, 762, 1333, 1361
DdeI CTNAG 4 cut(s) 158, 1230, 1354, 1397
DinI GGCGCC 1 cut(s) 338
DpnI GATC 6 cut(s) 209, 678, 795, 867, 927, 1296
DpnII GATC 6 cut(s) 207, 676, 793, 865, 925, 1294
DraI TTTAAA 1 cut(s) 247
Eam1104I CTCTTC 3 cut(s) 510, 1060, 1101
EarI CTCTTC 3 cut(s) 510, 1060, 1101
Eco130I CCWWGG 2 cut(s) 47, 350
Eco47I GGWCC 1 cut(s) 1309
Eco57I CTGAAG 2 cut(s) 327, 332
Eco88I CYCGRG 3 cut(s) 493, 657, 1323
EcoRI GAATTC 1 cut(s) 1032
EcoRII CCWGG 1 cut(s) 28
EcoT14I CCWWGG 2 cut(s) 47, 350
EgeI GGCGCC 1 cut(s) 338
EheI GGCGCC 1 cut(s) 338
ErhI CCWWGG 2 cut(s) 47, 350
FaeI CATG 7 cut(s) 13, 61, 354, 521, 790, 968, 1256
FalI AAGNNNNNCTT 6 cut(s) 365, 397, 396, 428, 470, 502
FaqI GGGAC 1 cut(s) 476
FatI CATG 7 cut(s) 9, 57, 350, 517, 786, 964, 1252
FbaI TGATCA 2 cut(s) 793, 925
FblI GTMKAC 1 cut(s) 669
Fnu4HI GCNGC 4 cut(s) 64, 75, 327, 638
FokI GGATG 5 cut(s) 374, 787, 1142, 1166, 1220
Fsp4HI GCNGC 4 cut(s) 64, 75, 327, 638
FspBI CTAG 4 cut(s) 591, 1188, 1215, 1350
GlaI GCGC 3 cut(s) 338, 954, 1092
GluI GCNGC 4 cut(s) 64, 75, 327, 638
HaeII RGCGCY 2 cut(s) 340, 956
HaeIII GGCC 3 cut(s) 66, 77, 1082
HapII CCGG 2 cut(s) 494, 1238
HgaI GACGC 1 cut(s) 80
HhaI GCGC 3 cut(s) 339, 955, 1093
Hin1I GRCGYC 2 cut(s) 337, 980
Hin1II CATG 7 cut(s) 13, 61, 354, 521, 790, 968, 1256
Hin6I GCGC 3 cut(s) 337, 953, 1091
HinP1I GCGC 3 cut(s) 337, 953, 1091
HincII GTYRAC 1 cut(s) 984
HindII GTYRAC 1 cut(s) 984
HinfI GANTC 6 cut(s) 143, 215, 550, 660, 721, 1211
HpaII CCGG 2 cut(s) 494, 1238
HphI GGTGA 3 cut(s) 18, 698, 920
Hpy166II GTNNAC 3 cut(s) 670, 762, 984
Hpy188I TCNGA 7 cut(s) 346, 536, 925, 978, 1060, 1299, 1357
Hpy188III TCNNGA 8 cut(s) 227, 554, 869, 881, 965, 1020, 1283, 1418
Hpy8I GTNNAC 3 cut(s) 670, 762, 984
Hpy99I CGWCG 2 cut(s) 74, 982
HpyAV CCTTC 7 cut(s) 15, 93, 307, 351, 422, 705, 1170
HpyCH4IV ACGT 4 cut(s) 672, 877, 980, 1144
HpyCH4V TGCA 7 cut(s) 23, 119, 238, 613, 801, 856, 1076
HpyF10VI GCNNNNNNNGC 3 cut(s) 104, 478, 1088
HpyF3I CTNAG 4 cut(s) 158, 1230, 1354, 1397
HpySE526I ACGT 4 cut(s) 672, 877, 980, 1144
Hsp92I GRCGYC 2 cut(s) 337, 980
Hsp92II CATG 7 cut(s) 13, 61, 354, 521, 790, 968, 1256
HspAI GCGC 3 cut(s) 337, 953, 1091
KasI GGCGCC 1 cut(s) 336
Ksp22I TGATCA 2 cut(s) 793, 925
Kzo9I GATC 6 cut(s) 207, 676, 793, 865, 925, 1294
LmnI GCTCC 2 cut(s) 178, 1234
Lsp1109I GCAGC 1 cut(s) 313
LweI GCATC 5 cut(s) 32, 128, 574, 1120, 1366
MaeI CTAG 4 cut(s) 591, 1188, 1215, 1350
MaeII ACGT 4 cut(s) 672, 877, 980, 1144
MaeIII GTNAC 3 cut(s) 377, 782, 869
MalI GATC 6 cut(s) 209, 678, 795, 867, 927, 1296
MbiI CCGCTC 1 cut(s) 637
MboI GATC 6 cut(s) 207, 676, 793, 865, 925, 1294
MboII GAAGA 6 cut(s) 138, 416, 419, 497, 1047, 1118
MfeI CAATTG 2 cut(s) 233, 1169
MflI RGATCY 1 cut(s) 676
MhlI GDGCHC 2 cut(s) 605, 831
Mly113I GGCGCC 1 cut(s) 337
MlyI GAGTC 3 cut(s) 559, 669, 715
MmeI TCCRAC 4 cut(s) 156, 930, 1001, 1107
MroXI GAANNNNTTC 2 cut(s) 283, 411
MseI TTAA 3 cut(s) 204, 246, 1383
MslI CAYNNNNRTG 1 cut(s) 1190
MspI CCGG 2 cut(s) 494, 1238
MspR9I CCNGG 3 cut(s) 30, 494, 495
MunI CAATTG 2 cut(s) 233, 1169
Mva1269I GAATGC 1 cut(s) 1406
MvaI CCWGG 1 cut(s) 30
MvnI CGCG 1 cut(s) 74
MwoI GCNNNNNNNGC 3 cut(s) 104, 478, 1088
NarI GGCGCC 1 cut(s) 337
NciI CCSGG 2 cut(s) 494, 495
NcoI CCATGG 1 cut(s) 350
NdeII GATC 6 cut(s) 207, 676, 793, 865, 925, 1294
NlaIII CATG 7 cut(s) 13, 61, 354, 521, 790, 968, 1256
NlaIV GGNNCC 9 cut(s) 338, 363, 817, 828, 975, 1051, 1236, 1242, 1263
NmuCI GTSAC 2 cut(s) 782, 869
NspI RCATGY 1 cut(s) 521
PaeR7I CTCGAG 2 cut(s) 657, 1323
PagI TCATGA 1 cut(s) 964
PcsI WCGNNNNNNNCGW 2 cut(s) 495, 874
PctI GAATGC 1 cut(s) 1406
PdmI GAANNNNTTC 2 cut(s) 283, 411
PfeI GAWTC 3 cut(s) 143, 215, 1211
PflFI GACNNNGTC 1 cut(s) 488
PkrI GCNGC 4 cut(s) 65, 76, 328, 639
PleI GAGTC 3 cut(s) 558, 668, 715
PluTI GGCGCC 1 cut(s) 340
PpsI GAGTC 3 cut(s) 558, 668, 715
PshAI GACNNNNGTC 1 cut(s) 876
PsiI TTATAA 1 cut(s) 1269
Psp6I CCWGG 1 cut(s) 28
PspGI CCWGG 1 cut(s) 28
PspN4I GGNNCC 9 cut(s) 338, 363, 817, 828, 975, 1051, 1236, 1242, 1263
PspPI GGNCC 2 cut(s) 1081, 1309
PspXI VCTCGAGB 2 cut(s) 657, 1323
PsuI RGATCY 1 cut(s) 676
PsyI GACNNNGTC 1 cut(s) 488
RsaI GTAC 5 cut(s) 436, 442, 763, 1334, 1362
RsaNI GTAC 5 cut(s) 435, 441, 762, 1333, 1361
RseI CAYNNNNRTG 1 cut(s) 1190
SaqAI TTAA 3 cut(s) 204, 246, 1383
SatI GCNGC 4 cut(s) 64, 75, 327, 638
Sau3AI GATC 6 cut(s) 207, 676, 793, 865, 925, 1294
Sau96I GGNCC 2 cut(s) 1081, 1309
SchI GAGTC 3 cut(s) 559, 669, 715
ScrFI CCNGG 3 cut(s) 30, 494, 495
SduI GDGCHC 2 cut(s) 605, 831
SfaNI GCATC 5 cut(s) 32, 128, 574, 1120, 1366
SfoI GGCGCC 1 cut(s) 338
Sfr274I CTCGAG 2 cut(s) 657, 1323
SinI GGWCC 1 cut(s) 1309
SlaI CTCGAG 2 cut(s) 657, 1323
SmaI CCCGGG 1 cut(s) 495
SmiMI CAYNNNNRTG 1 cut(s) 1190
SmlI CTYRAG 4 cut(s) 657, 837, 1273, 1323
SmoI CTYRAG 4 cut(s) 657, 837, 1273, 1323
SpeI ACTAGT 1 cut(s) 1187
SsiI CCGC 4 cut(s) 63, 74, 637, 1112
SspDI GGCGCC 1 cut(s) 336
SspI AATATT 1 cut(s) 1045
SspMI CTAG 4 cut(s) 591, 1188, 1215, 1350
StyD4I CCNGG 3 cut(s) 28, 492, 493
StyI CCWWGG 2 cut(s) 47, 350
TaiI ACGT 4 cut(s) 675, 880, 983, 1147
TaqI TCGA 8 cut(s) 69, 137, 184, 265, 658, 889, 1324, 1339
TaqII GACCGA 1 cut(s) 770
TatI WGTACW 3 cut(s) 761, 1332, 1360
TauI GCSGC 3 cut(s) 66, 77, 640
TfiI GAWTC 3 cut(s) 143, 215, 1211
Tru1I TTAA 3 cut(s) 204, 246, 1383
Tru9I TTAA 3 cut(s) 204, 246, 1383
TscAI CASTG 2 cut(s) 803, 1083
TseFI GTSAC 2 cut(s) 782, 869
TseI GCWGC 1 cut(s) 326
Tsp45I GTSAC 2 cut(s) 782, 869
TspDTI ATGAA 6 cut(s) 46, 228, 953, 1241, 1381, 1399
TspMI CCCGGG 1 cut(s) 493
TspRI CASTG 2 cut(s) 803, 1083
Tth111I GACNNNGTC 1 cut(s) 488
VpaK11BI GGWCC 1 cut(s) 1309
XapI RAATTY 6 cut(s) 241, 456, 754, 860, 1032, 1314
XceI RCATGY 1 cut(s) 521
XhoI CTCGAG 2 cut(s) 657, 1323
XmaI CCCGGG 1 cut(s) 493
XmiI GTMKAC 1 cut(s) 669
XmnI GAANNNNTTC 2 cut(s) 283, 411
XspI CTAG 4 cut(s) 591, 1188, 1215, 1350
ZraI GACGTC 1 cut(s) 981
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.