Ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 79 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 85, 238 |
| AgsI | TTSAA | 3 cut(s) | 98, 266, 447 |
| AjiI | CACGTC | 1 cut(s) | 185 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 288, 320 |
| AluBI | AGCT | 3 cut(s) | 47, 271, 371 |
| AluI | AGCT | 3 cut(s) | 47, 271, 371 |
| Alw26I | GTCTC | 2 cut(s) | 411, 488 |
| AsuHPI | GGTGA | 1 cut(s) | 293 |
| BbvCI | CCTCAGC | 1 cut(s) | 237 |
| BciVI | GTATCC | 2 cut(s) | 18, 462 |
| BcoDI | GTCTC | 2 cut(s) | 411, 488 |
| BfmI | CTRYAG | 1 cut(s) | 156 |
| BfuI | GTATCC | 2 cut(s) | 18, 462 |
| BglII | AGATCT | 1 cut(s) | 109 |
| BmgBI | CACGTC | 1 cut(s) | 185 |
| BmsI | GCATC | 1 cut(s) | 90 |
| Bpu10I | CCTNAGC | 1 cut(s) | 237 |
| Bsa29I | ATCGAT | 1 cut(s) | 39 |
| BsaJI | CCNNGG | 1 cut(s) | 13 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 85, 238 |
| Bse3DI | GCAATG | 1 cut(s) | 29 |
| BseCI | ATCGAT | 1 cut(s) | 39 |
| BseDI | CCNNGG | 1 cut(s) | 13 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 85, 238 |
| BseMI | GCAATG | 1 cut(s) | 29 |
| BseMII | CTCAG | 2 cut(s) | 228, 321 |
| BsgI | GTGCAG | 1 cut(s) | 441 |
| BshVI | ATCGAT | 1 cut(s) | 39 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 85, 238 |
| BsmAI | GTCTC | 2 cut(s) | 411, 488 |
| BsmBI | CGTCTC | 1 cut(s) | 488 |
| Bsp143I | GATC | 2 cut(s) | 109, 333 |
| BspACI | CCGC | 1 cut(s) | 79 |
| BspCNI | CTCAG | 2 cut(s) | 229, 322 |
| BspDI | ATCGAT | 1 cut(s) | 39 |
| BsrDI | GCAATG | 1 cut(s) | 29 |
| BssECI | CCNNGG | 1 cut(s) | 13 |
| BssMI | GATC | 2 cut(s) | 109, 333 |
| BstC8I | GCNNGC | 2 cut(s) | 79, 460 |
| BstDEI | CTNAG | 4 cut(s) | 101, 237, 330, 423 |
| BstDSI | CCRYGG | 1 cut(s) | 13 |
| BstKTI | GATC | 2 cut(s) | 112, 336 |
| BstMAI | GTCTC | 2 cut(s) | 411, 488 |
| BstMBI | GATC | 2 cut(s) | 109, 333 |
| BstSFI | CTRYAG | 1 cut(s) | 156 |
| BstX2I | RGATCY | 1 cut(s) | 109 |
| BstYI | RGATCY | 1 cut(s) | 109 |
| Bsu15I | ATCGAT | 1 cut(s) | 39 |
| BsuI | GTATCC | 2 cut(s) | 18, 462 |
| BsuTUI | ATCGAT | 1 cut(s) | 39 |
| BtgI | CCRYGG | 1 cut(s) | 13 |
| BtrI | CACGTC | 1 cut(s) | 185 |
| Cac8I | GCNNGC | 2 cut(s) | 79, 460 |
| ClaI | ATCGAT | 1 cut(s) | 39 |
| CseI | GACGC | 2 cut(s) | 47, 470 |
| CviAII | CATG | 2 cut(s) | 146, 233 |
| CviJI | RGCY | 4 cut(s) | 47, 144, 271, 371 |
| CviKI_1 | RGCY | 4 cut(s) | 47, 144, 271, 371 |
| DdeI | CTNAG | 4 cut(s) | 101, 237, 330, 423 |
| DpnI | GATC | 2 cut(s) | 111, 335 |
| DpnII | GATC | 2 cut(s) | 109, 333 |
| Esp3I | CGTCTC | 1 cut(s) | 488 |
| FaeI | CATG | 2 cut(s) | 149, 236 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 288, 320 |
| FatI | CATG | 2 cut(s) | 145, 232 |
| FauI | CCCGC | 1 cut(s) | 86 |
| HgaI | GACGC | 2 cut(s) | 47, 470 |
| Hin1II | CATG | 2 cut(s) | 149, 236 |
| HindIII | AAGCTT | 1 cut(s) | 269 |
| HphI | GGTGA | 1 cut(s) | 293 |
| Hpy188I | TCNGA | 2 cut(s) | 331, 468 |
| Hpy188III | TCNNGA | 1 cut(s) | 107 |
| HpyCH4IV | ACGT | 1 cut(s) | 184 |
| HpyCH4V | TGCA | 2 cut(s) | 34, 458 |
| HpyF3I | CTNAG | 4 cut(s) | 101, 237, 330, 423 |
| HpySE526I | ACGT | 1 cut(s) | 184 |
| Hsp92II | CATG | 2 cut(s) | 149, 236 |
| Kzo9I | GATC | 2 cut(s) | 109, 333 |
| LpnPI | CCDG | 1 cut(s) | 468 |
| LweI | GCATC | 1 cut(s) | 90 |
| MaeII | ACGT | 1 cut(s) | 184 |
| MaeIII | GTNAC | 1 cut(s) | 215 |
| MalI | GATC | 2 cut(s) | 111, 335 |
| MboI | GATC | 2 cut(s) | 109, 333 |
| MboII | GAAGA | 2 cut(s) | 104, 308 |
| MflI | RGATCY | 1 cut(s) | 109 |
| MluCI | AATT | 3 cut(s) | 62, 315, 337 |
| MmeI | TCCRAC | 1 cut(s) | 140 |
| MnlI | CCTC | 3 cut(s) | 206, 232, 312 |
| MseI | TTAA | 1 cut(s) | 192 |
| NdeII | GATC | 2 cut(s) | 109, 333 |
| NlaIII | CATG | 2 cut(s) | 149, 236 |
| NmuCI | GTSAC | 1 cut(s) | 215 |
| PsuI | RGATCY | 1 cut(s) | 109 |
| SaqAI | TTAA | 1 cut(s) | 192 |
| Sau3AI | GATC | 2 cut(s) | 109, 333 |
| SfaNI | GCATC | 1 cut(s) | 90 |
| SfcI | CTRYAG | 1 cut(s) | 156 |
| Sse9I | AATT | 3 cut(s) | 62, 315, 337 |
| SsiI | CCGC | 1 cut(s) | 79 |
| SspI | AATATT | 1 cut(s) | 385 |
| TaiI | ACGT | 1 cut(s) | 187 |
| TaqI | TCGA | 1 cut(s) | 39 |
| TasI | AATT | 3 cut(s) | 62, 315, 337 |
| Tru1I | TTAA | 1 cut(s) | 192 |
| Tru9I | TTAA | 1 cut(s) | 192 |
| TseFI | GTSAC | 1 cut(s) | 215 |
| Tsp45I | GTSAC | 1 cut(s) | 215 |
| TspDTI | ATGAA | 2 cut(s) | 309, 357 |