Rh2AG339100

Domain of unknown function (DUF4283)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2A
OG0000044
Physical Location & Seq
Reverse (-)
49225719 .. 49227095
1377 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2AG339100.1

Sequence Viewer

Length: 1029 bp
ATGAGTAATTTGGGAACCCTAAACCCTAGCCCCATGCTCACTATCCCGCCTCAACCATCTTCCTCTAACCTTAAGCCGTCCTTTGCCTCTGTACATGGTCAGGTTCAGCCCCTAGGATTTGCCATTGATGATATTCCTTCGCCGTCGTTGGAGGACGGACTGATCACAGTCCAGATCTCAGAGGCCTCGTTCCTTAGGGGTCTGGATAGGTGTAAAACCTTGCTAGTTGGAAAGCTTCTGTCGCCTCCCAATGGAACTATGCCAAAAGCCCATGAACTTGCTCAACGTTTGAAGATTCTCTGGAACAACGTTTCAAATTGGTCCGTGGCCCGTGCTCATGGATCTTCTATTGTGACTACTGTGGACTATGAATCAGTGCCTGTCCTATGTGATGGATGCGGTACTGTGGGCCACTCCATTAACAAGTGCAGGATTACTACCAACGGAACACAGGGGAACCAAAGCGAACATGGTCGATCTCCAGTGCGTTCGCACCTTGCTCGTAAAAAGCGATCGAGGCAGAGATCACTGAGGACTATTACGGACTCTGTACTGGTGCCGAATCACAACAACGTGATGGAGAATCAGTTGGGGAAAGAATTGGAGGTACAGGAGGCTTTGGAATCTGCTCCCTTTACTCCGGCAGCAGATGCTTCGGTGATTGCTCCCATTGTCTCAAGAGACTCTATGATTGCACCGGGAGAGGTGCAGGCGGGCCCAGTTTTGGCTCCAACTAGTCAGACTACAACTTCTTCCATGGCTTCAGTTCCCCCTGGTTTCTCAAAGGTGCACTCACCACAGGCACCCGCAGATAGTTTGGCCTCCACCTCTGTAGAACAGACTGGGGCTTCGAAAGATATGTTACTGGAGGAGCGTGAGGAGGGTGAATTTACTCCAGTGATATCTAAAAAGTCCATGAAGCTTCAAAAGTCTGTTGTAAAAGCTAAAGTAAAGAAAAAGCAGGGTATTTCTGATCATAGTATCAAGCGGGCACTCGTGCAGAAGGGTGCTAAGCACAGGGCTTTCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF4283 zf-CCHC_4

Protein Analysis

342

Amino Acids

36.58

Weight (kDa)

9.51

Isoelectric Point (pI)

47.97

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000044)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G07760 AT5G28823
fragaria_vesca FvH4_1g13572 FvH4_2g03281 FvH4_2g04691 FvH4_2g08332 FvH4_2g08333 FvH4_2g15313 FvH4_2g26101 FvH4_2g29541 FvH4_3g06911 FvH4_3g34351 FvH4_3g43733 FvH4_4g02432 FvH4_4g05601 FvH4_4g08213 FvH4_4g09961 FvH4_4g10131 FvH4_4g20001 FvH4_4g20002 FvH4_5g01051 FvH4_5g01401 FvH4_5g27943 FvH4_6g09220 FvH4_6g17383 FvH4_6g35491 FvH4_6g46421 FvH4_7g04151 FvH4_7g13962 FvH4_7g18611 FvH4_7g19491 FvH4_7g19511 FvH4_7g26562
malus_domestica MD06G1221600.v1.1
pyrus_communis pycom10g21150
rosa_chinensis RchiOBHm_Chr1g0337571 RchiOBHm_Chr2g0168771 RchiOBHm_Chr3g0453631 RchiOBHm_Chr6g0278581
rosa_laevigata RLG00000001899 RLG00000001925 RLG00000002026 RLG00000003410 RLG00000003767 RLG00000004304 RLG00000004473 RLG00000004677 RLG00000006856 RLG00000007994 RLG00000009888 RLG00000011627 RLG00000012174 RLG00000012217 RLG00000013118 RLG00000013736 RLG00000014194 RLG00000014251 RLG00000015011 RLG00000015057 RLG00000015235 RLG00000017416 RLG00000018052 RLG00000018537 RLG00000019968 RLG00000020096 RLG00000020263 RLG00000022606 RLG00000023119 RLG00000028111 RLG00000029686 RLG00000030126 RLG00000031124 RLG00000031236 RLG00000032766 RLG00000033171 RLG00000033548 RLG00000033987 RLG00000034062 RLG00000035115 RLG00000035863
rosa_multiflora Rmu_co8036712.1_g000001 Rmu_co8080248.1_g000001 Rmu_co8208334.1_g000001 Rmu_co8253451.1_g000001 Rmu_co8393241.1_g000001 Rmu_co8522225.1_g000005 Rmu_sc0000060.1_g000030 Rmu_sc0000060.1_g000031 Rmu_sc0000060.1_g000032 Rmu_sc0000090.1_g000008 Rmu_sc0000149.1_g000051 Rmu_sc0000149.1_g000058 Rmu_sc0000309.1_g000050 Rmu_sc0000370.1_g000022 Rmu_sc0000370.1_g000023 Rmu_sc0000370.1_g000024 Rmu_sc0000418.1_g000018 Rmu_sc0000427.1_g000014 Rmu_sc0000427.1_g000015 Rmu_sc0000434.1_g000008 Rmu_sc0000487.1_g000038 Rmu_sc0000487.1_g000039 Rmu_sc0000569.1_g000029 Rmu_sc0000580.1_g000097 Rmu_sc0000595.1_g000068 Rmu_sc0000607.1_g000027 Rmu_sc0000738.1_g000004 Rmu_sc0000758.1_g000001 Rmu_sc0000758.1_g000002 Rmu_sc0000870.1_g000019 Rmu_sc0000924.1_g000040 Rmu_sc0000924.1_g000041 Rmu_sc0000999.1_g000037 Rmu_sc0001001.1_g000001 Rmu_sc0001010.1_g000080 Rmu_sc0001075.1_g000041 Rmu_sc0001097.1_g000016 Rmu_sc0001173.1_g000020 Rmu_sc0001258.1_g000010 Rmu_sc0001425.1_g000031 Rmu_sc0001493.1_g000020 Rmu_sc0001493.1_g000021 Rmu_sc0001644.1_g000024 Rmu_sc0001648.1_g000039 Rmu_sc0001662.1_g000002 Rmu_sc0001849.1_g000046 Rmu_sc0001851.1_g000038 Rmu_sc0001861.1_g000006 Rmu_sc0001899.1_g000008 Rmu_sc0002231.1_g000023 Rmu_sc0002393.1_g000012 Rmu_sc0002515.1_g000010 Rmu_sc0002551.1_g000013 Rmu_sc0002680.1_g000029 Rmu_sc0002700.1_g000030 Rmu_sc0002700.1_g000031 Rmu_sc0002709.1_g000035 Rmu_sc0002779.1_g000017 Rmu_sc0003267.1_g000040 Rmu_sc0003306.1_g000009 Rmu_sc0003338.1_g000014 Rmu_sc0003522.1_g000038 Rmu_sc0003522.1_g000039 Rmu_sc0003653.1_g000031 Rmu_sc0003901.1_g000003 Rmu_sc0003920.1_g000009 Rmu_sc0004014.1_g000009 Rmu_sc0004016.1_g000013 Rmu_sc0004031.1_g000002 Rmu_sc0004106.1_g000001 Rmu_sc0004432.1_g000004 Rmu_sc0004481.1_g000020 Rmu_sc0004874.1_g000005 Rmu_sc0004928.1_g000005 Rmu_sc0005065.1_g000053 Rmu_sc0005091.1_g000005 Rmu_sc0005217.1_g000015 Rmu_sc0005242.1_g000002 Rmu_sc0005300.1_g000011 Rmu_sc0005400.1_g000004 Rmu_sc0005486.1_g000007 Rmu_sc0005527.1_g000015 Rmu_sc0006059.1_g000021 Rmu_sc0006087.1_g000004 Rmu_sc0006184.1_g000006 Rmu_sc0006184.1_g000007 Rmu_sc0006578.1_g000006 Rmu_sc0006730.1_g000010 Rmu_sc0006736.1_g000030 Rmu_sc0006736.1_g000033 Rmu_sc0007333.1_g000018 Rmu_sc0007856.1_g000010 Rmu_sc0008231.1_g000003 Rmu_sc0009862.1_g000012 Rmu_sc0010547.1_g000001 Rmu_sc0010547.1_g000003 Rmu_sc0010632.1_g000012 Rmu_sc0010747.1_g000008 Rmu_sc0011075.1_g000009 Rmu_sc0011565.1_g000004 Rmu_sc0011641.1_g000003 Rmu_sc0013102.1_g000013 Rmu_sc0013160.1_g000006 Rmu_sc0014846.1_g000004 Rmu_sc0017037.1_g000003 Rmu_sc0018203.1_g000001 Rmu_sc0018204.1_g000001 Rmu_sc0018348.1_g000001 Rmu_sc0019354.1_g000002 Rmu_sc0021630.1_g000002 Rmu_sc0022987.1_g000002 Rmu_sc0024469.1_g000005 Rmu_sc0033519.1_g000001 Rmu_sc0033519.1_g000002 Rmu_sc0033519.1_g000003 Rmu_sc0042775.1_g000001 Rmu_ssc0000110.1_g000003 Rmu_ssc0000110.1_g000004 Rmu_ssc0000126.1_g000068 Rmu_ssc0000200.1_g000007 Rmu_ssc0000295.1_g000003 Rmu_ssc0000295.1_g000004 Rmu_ssc0000299.1_g000010 Rmu_ssc0000308.1_g000024 Rmu_ssc0000339.1_g000006 Rmu_ssc0000385.1_g000012 Rmu_ssc0000409.1_g000004 Rmu_ssc0000421.1_g000004
rosa_roxburghii Rroxscaffold_156G00440360 Rroxscaffold_166G00440800 Rroxscaffold_1G00039040 Rroxscaffold_1G00039050 Rroxscaffold_1G00073950 Rroxscaffold_2G00091710 Rroxscaffold_2G00120050 Rroxscaffold_2G00122590 Rroxscaffold_3G00219700 Rroxscaffold_3G00264140 Rroxscaffold_4G00290600 Rroxscaffold_4G00323610 Rroxscaffold_4G00328460 Rroxscaffold_5G00343440 Rroxscaffold_5G00343570 Rroxscaffold_5G00378540 Rroxscaffold_5G00385090 Rroxscaffold_7G00169130 Rroxscaffold_7G00216420
rosa_rugosa Rorug01G0065800 Rorug01G0073500 Rorug01G0091700 Rorug01G0096500 Rorug01G0204700.1 Rorug01G0249100 Rorug01G0333800 Rorug01G0333900 Rorug01G0339500 Rorug01G0431300 Rorug02G0085400 Rorug02G0117500 Rorug02G0130900 Rorug02G0178800 Rorug02G0226700 Rorug02G0336300 Rorug02G0338700 Rorug02G0351400 Rorug02G0459900 Rorug03G0187000 Rorug03G0223700 Rorug03G0291300 Rorug03G0291300 Rorug03G0311100 Rorug03G0316900 Rorug03G0346000 Rorug04G0014500 Rorug04G0014600 Rorug04G0124100 Rorug04G0136500 Rorug04G0302000 Rorug04G0338100 Rorug04G0338200 Rorug04G0413100 Rorug05G0182200 Rorug05G0226500 Rorug05G0273300 Rorug05G0292200 Rorug05G0292200 Rorug05G0392500 Rorug05G0394500 Rorug05G0394600 Rorug05G0505600.1 Rorug06G0351400 Rorug06G0393400 Rorug06G0393600 Rorug06G0470000 Rorug07G0063100 Rorug07G0086800 Rorug07G0109200 Rorug07G0236100
rosa_samantha Rh1AG010800 Rh1AG011100 Rh1AG064900 Rh1AG088000 Rh1AG207100 Rh1AG262000 Rh1AG300800 Rh1BG043000 Rh1BG144600 Rh1BG180700 Rh1BG180800 Rh1BG328800 Rh1BG399400 Rh1CG041400 Rh1CG047300 Rh1CG379700 Rh1DG036500 Rh1DG083000 Rh1DG210700 Rh1DG210800 Rh1DG231100 Rh2AG007900 Rh2AG055500 Rh2AG339100 Rh2AG368100 Rh2BG243300 Rh2BG258900 Rh2BG292000 Rh2BG333500 Rh2BG387300 Rh2BG612800 Rh2BG619100 Rh2CG026500 Rh2CG163600 Rh2CG535700 Rh2DG186400 Rh2DG235000 Rh2DG314500 Rh2DG388500 Rh2DG391400 Rh2DG496900 Rh2DG526700 Rh2DG570700 Rh3AG330700 Rh3BG266900 Rh3CG236000 Rh3CG340400 Rh3DG090000 Rh3DG278400 Rh3DG297600 Rh3DG362600 Rh4AG001300 Rh4AG023300 Rh4AG097100 Rh4AG427000 Rh4BG029400 Rh4BG032400 Rh4BG086000 Rh4BG249200 Rh4CG001900 Rh4CG040600 Rh4CG093000 Rh4CG106300 Rh4CG113200 Rh4CG113900 Rh4DG002300 Rh4DG144400 Rh4DG234200 Rh5AG043700 Rh5AG084900 Rh5AG161500 Rh5AG409000 Rh5AG457200 Rh5AG457900 Rh5AG473700 Rh5AG520600 Rh5BG042100 Rh5BG124100 Rh5BG323500 Rh5BG417200 Rh5BG443700 Rh5BG451500 Rh5BG464900 Rh5BG470400 Rh5BG522500 Rh5CG068800 Rh5CG178300 Rh5CG231000 Rh5CG258600 Rh5CG394500 Rh5CG473700 Rh5DG164700 Rh5DG235400 Rh5DG261300 Rh5DG304900 Rh5DG334500 Rh5DG424300 Rh5DG458400 Rh5DG478600 Rh5DG552300 Rh5DG552700 Rh6AG037000 Rh6AG042100 Rh6AG255500 Rh6AG283400 Rh6AG291800 Rh6BG049600 Rh6BG080700 Rh6BG114600 Rh6BG128900 Rh6BG352500 Rh6CG052400 Rh6CG112900 Rh6CG113000 Rh6CG131300 Rh6CG157700 Rh6CG243200 Rh6CG254100 Rh6CG275700 Rh6CG299700 Rh6CG309100 Rh6CG317600 Rh6CG342600 Rh6CG471900 Rh6DG038200 Rh6DG102300 Rh6DG114400 Rh6DG225900 Rh6DG292900 Rh6DG320700 Rh6DG512800 Rh7AG217700 Rh7AG313900 Rh7AG446000 Rh7AG472600 Rh7BG223100 Rh7BG349900 Rh7BG352000 Rh7CG160200 Rh7CG233900 Rh7CG242700 Rh7CG273900 Rh7CG306400 Rh7CG322200 Rh7DG053800 Rh7DG077800 Rh7DG227700 Rh7DG404800
rosa_wichuraiana Rw0G003990 Rw2G022110 Rw2G024890 Rw6G005700 Rw7G008770

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 556, 802
AciI CCGC 5 cut(s) 47, 399, 713, 807, 988
AclI AACGTT 2 cut(s) 286, 309
AclWI GGATC 1 cut(s) 349
AcsI RAATTY 1 cut(s) 887
AcuI CTGAAG 1 cut(s) 747
AfaI GTAC 4 cut(s) 93, 403, 552, 609
AfiI CCNNNNNNNGG 2 cut(s) 251, 724
AflII CTTAAG 1 cut(s) 71
AgsI TTSAA 3 cut(s) 292, 315, 926
AhlI ACTAGT 1 cut(s) 734
AjnI CCWGG 1 cut(s) 772
AluBI AGCT 3 cut(s) 235, 922, 944
AluI AGCT 3 cut(s) 235, 922, 944
Alw21I GWGCWC 2 cut(s) 337, 792
Alw26I GTCTC 2 cut(s) 675, 679
Alw44I GTGCAC 1 cut(s) 788
AlwI GGATC 1 cut(s) 349
AlwNI CAGNNNCTG 1 cut(s) 380
AoxI GGCC 5 cut(s) 183, 327, 409, 715, 819
ApaI GGGCCC 1 cut(s) 719
ApaLI GTGCAC 1 cut(s) 788
ApeKI GCWGC 1 cut(s) 644
ApoI RAATTY 1 cut(s) 887
ArsI GACNNNNNNTTYG 2 cut(s) 832, 864
AspA2I CCTAGG 1 cut(s) 112
AspS9I GGNCC 5 cut(s) 321, 328, 409, 715, 716
AsuC2I CCSGG 1 cut(s) 699
AsuHPI GGTGA 3 cut(s) 670, 786, 896
AsuII TTCGAA 1 cut(s) 851
AvaII GGWCC 1 cut(s) 321
AvrII CCTAGG 1 cut(s) 112
AxyI CCTNAGG 1 cut(s) 194
BaeGI GKGCMC 3 cut(s) 719, 792, 994
BanI GGYRCC 2 cut(s) 556, 802
BanII GRGCYC 1 cut(s) 719
BauI CACGAG 1 cut(s) 995
Bbv12I GWGCWC 2 cut(s) 337, 792
BbvI GCAGC 1 cut(s) 656
BccI CCATC 3 cut(s) 64, 386, 571
BceAI ACGGC 2 cut(s) 61, 127
BcgI CGANNNNNNTGC 4 cut(s) 482, 516, 636, 670
BciT130I CCWGG 1 cut(s) 774
BclI TGATCA 2 cut(s) 162, 973
BcnI CCSGG 1 cut(s) 699
BcoDI GTCTC 2 cut(s) 675, 679
BcuI ACTAGT 1 cut(s) 734
BfaI CTAG 4 cut(s) 27, 113, 224, 735
BfmI CTRYAG 1 cut(s) 831
BfrI CTTAAG 1 cut(s) 71
BglII AGATCT 1 cut(s) 174
BisI GCNGC 1 cut(s) 645
BlnI CCTAGG 1 cut(s) 112
BlpI GCTNAGC 1 cut(s) 1011
BlsI GCNGC 1 cut(s) 646
Bme1390I CCNGG 2 cut(s) 699, 774
Bme18I GGWCC 1 cut(s) 321
BmgT120I GGNCC 5 cut(s) 321, 328, 409, 715, 716
BmiI GGNNCC 6 cut(s) 16, 458, 558, 717, 729, 804
BmrFI CCNGG 2 cut(s) 699, 774
BmrI ACTGGG 2 cut(s) 713, 852
BmsI GCATC 2 cut(s) 386, 640
BmuI ACTGGG 2 cut(s) 713, 852
BpmI CTGGAG 3 cut(s) 465, 879, 887
Bpu1102I GCTNAGC 1 cut(s) 1011
Bpu14I TTCGAA 1 cut(s) 851
BpuEI CTTGAG 1 cut(s) 661
BpuMI CCSGG 1 cut(s) 699
BsaJI CCNNGG 4 cut(s) 112, 324, 756, 772
BsaXI ACNNNNNCTCC 2 cut(s) 572, 602
Bsc4I CCNNNNNNNGG 2 cut(s) 251, 724
Bse1I ACTGG 6 cut(s) 482, 558, 719, 847, 870, 896
Bse21I CCTNAGG 1 cut(s) 194
BseBI CCWGG 1 cut(s) 774
BseDI CCNNGG 4 cut(s) 112, 324, 756, 772
BseGI GGATG 1 cut(s) 401
BseLI CCNNNNNNNGG 2 cut(s) 251, 724
BseMII CTCAG 2 cut(s) 192, 521
BseNI ACTGG 6 cut(s) 482, 558, 719, 847, 870, 896
BseRI GAGGAG 2 cut(s) 884, 893
BseSI GKGCMC 3 cut(s) 719, 792, 994
BseXI GCAGC 1 cut(s) 656
BsgI GTGCAG 3 cut(s) 448, 728, 1019
Bsh1285I CGRYCG 1 cut(s) 515
BshFI GGCC 5 cut(s) 185, 329, 411, 717, 821
BshNI GGYRCC 2 cut(s) 556, 802
BsiEI CGRYCG 1 cut(s) 515
BsiHKAI GWGCWC 2 cut(s) 337, 792
BsiSI CCGG 2 cut(s) 641, 698
BslI CCNNNNNNNGG 2 cut(s) 251, 724
BsmAI GTCTC 2 cut(s) 675, 679
BsnI GGCC 5 cut(s) 185, 329, 411, 717, 821
Bsp119I TTCGAA 1 cut(s) 851
Bsp120I GGGCCC 1 cut(s) 715
Bsp1286I GDGCHC 4 cut(s) 337, 719, 792, 994
Bsp1407I TGTACA 1 cut(s) 91
Bsp143I GATC 7 cut(s) 162, 174, 341, 476, 512, 524, 973
Bsp1720I GCTNAGC 1 cut(s) 1011
Bsp19I CCATGG 1 cut(s) 756
BspACI CCGC 5 cut(s) 47, 399, 713, 807, 988
BspANI GGCC 5 cut(s) 185, 329, 411, 717, 821
BspCNI CTCAG 2 cut(s) 191, 522
BspLI GGNNCC 6 cut(s) 16, 458, 558, 717, 729, 804
BspPI GGATC 1 cut(s) 349
BspT104I TTCGAA 1 cut(s) 851
BspT107I GGYRCC 2 cut(s) 556, 802
BspTI CTTAAG 1 cut(s) 71
BsrGI TGTACA 1 cut(s) 91
BsrI ACTGG 6 cut(s) 482, 558, 719, 847, 870, 896
BssECI CCNNGG 4 cut(s) 112, 324, 756, 772
BssMI GATC 7 cut(s) 162, 174, 341, 476, 512, 524, 973
BssSI CACGAG 1 cut(s) 995
BssT1I CCWWGG 2 cut(s) 112, 756
Bst2BI CACGAG 1 cut(s) 995
Bst2UI CCWGG 1 cut(s) 774
Bst4CI ACNGT 3 cut(s) 169, 361, 406
BstAFI CTTAAG 1 cut(s) 71
BstAPI GCANNNNNTGC 1 cut(s) 650
BstAUI TGTACA 1 cut(s) 91
BstBI TTCGAA 1 cut(s) 851
BstC8I GCNNGC 3 cut(s) 711, 715, 990
BstDEI CTNAG 4 cut(s) 178, 194, 530, 1011
BstDSI CCRYGG 2 cut(s) 324, 756
BstF5I GGATG 1 cut(s) 401
BstKTI GATC 7 cut(s) 165, 177, 344, 479, 515, 527, 976
BstMAI GTCTC 2 cut(s) 675, 679
BstMBI GATC 7 cut(s) 162, 174, 341, 476, 512, 524, 973
BstMCI CGRYCG 1 cut(s) 515
BstMWI GCNNNNNNNGC 3 cut(s) 241, 517, 650
BstNI CCWGG 1 cut(s) 774
BstSCI CCNGG 2 cut(s) 697, 772
BstSFI CTRYAG 1 cut(s) 831
BstSLI GKGCMC 3 cut(s) 719, 792, 994
BstV1I GCAGC 1 cut(s) 656
BstX2I RGATCY 2 cut(s) 174, 341
BstYI RGATCY 2 cut(s) 174, 341
Bsu36I CCTNAGG 1 cut(s) 194
BsuRI GGCC 5 cut(s) 185, 329, 411, 717, 821
BtgI CCRYGG 2 cut(s) 324, 756
BtsCI GGATG 1 cut(s) 401
BtsIMutI CAGTG 4 cut(s) 381, 489, 527, 903
Cac8I GCNNGC 3 cut(s) 711, 715, 990
CaiI CAGNNNCTG 1 cut(s) 380
Cfr13I GGNCC 5 cut(s) 321, 328, 409, 715, 716
Csp6I GTAC 4 cut(s) 92, 402, 551, 608
CviAII CATG 7 cut(s) 34, 95, 272, 338, 470, 757, 916
CviQI GTAC 4 cut(s) 92, 402, 551, 608
DdeI CTNAG 4 cut(s) 178, 194, 530, 1011
DpnI GATC 7 cut(s) 164, 176, 343, 478, 514, 526, 975
DpnII GATC 7 cut(s) 162, 174, 341, 476, 512, 524, 973
Eco130I CCWWGG 2 cut(s) 112, 756
Eco147I AGGCCT 1 cut(s) 185
Eco24I GRGCYC 1 cut(s) 719
Eco32I GATATC 1 cut(s) 903
Eco47I GGWCC 1 cut(s) 321
Eco57I CTGAAG 1 cut(s) 747
Eco81I CCTNAGG 1 cut(s) 194
EcoRII CCWGG 1 cut(s) 772
EcoRV GATATC 1 cut(s) 903
EcoT14I CCWWGG 2 cut(s) 112, 756
EcoT38I GRGCYC 1 cut(s) 719
ErhI CCWWGG 2 cut(s) 112, 756
FaeI CATG 7 cut(s) 37, 98, 275, 341, 473, 760, 919
FalI AAGNNNNNCTT 2 cut(s) 65, 97
FatI CATG 7 cut(s) 33, 94, 271, 337, 469, 756, 915
FauI CCCGC 4 cut(s) 54, 706, 814, 981
FbaI TGATCA 2 cut(s) 162, 973
Fnu4HI GCNGC 1 cut(s) 645
FokI GGATG 1 cut(s) 408
FriOI GRGCYC 1 cut(s) 719
Fsp4HI GCNGC 1 cut(s) 645
FspBI CTAG 4 cut(s) 27, 113, 224, 735
GluI GCNGC 1 cut(s) 645
GsuI CTGGAG 3 cut(s) 465, 879, 887
HaeIII GGCC 5 cut(s) 185, 329, 411, 717, 821
HapII CCGG 2 cut(s) 641, 698
Hin1II CATG 7 cut(s) 37, 98, 275, 341, 473, 760, 919
HindIII AAGCTT 2 cut(s) 233, 920
HinfI GANTC 7 cut(s) 295, 371, 545, 562, 583, 623, 683
HpaII CCGG 2 cut(s) 641, 698
HphI GGTGA 3 cut(s) 670, 786, 896
Hpy166II GTNNAC 2 cut(s) 364, 790
Hpy188I TCNGA 3 cut(s) 181, 741, 973
Hpy188III TCNNGA 4 cut(s) 172, 203, 301, 678
Hpy8I GTNNAC 2 cut(s) 364, 790
Hpy99I CGWCG 1 cut(s) 148
HpyAV CCTTC 2 cut(s) 147, 997
HpyCH4III ACNGT 3 cut(s) 169, 361, 406
HpyCH4IV ACGT 3 cut(s) 286, 309, 573
HpyCH4V TGCA 5 cut(s) 429, 695, 709, 790, 1000
HpyF10VI GCNNNNNNNGC 3 cut(s) 241, 517, 650
HpyF3I CTNAG 4 cut(s) 178, 194, 530, 1011
HpySE526I ACGT 3 cut(s) 286, 309, 573
Hsp92II CATG 7 cut(s) 37, 98, 275, 341, 473, 760, 919
Ksp22I TGATCA 2 cut(s) 162, 973
Kzo9I GATC 7 cut(s) 162, 174, 341, 476, 512, 524, 973
LmnI GCTCC 4 cut(s) 634, 670, 733, 871
Lsp1109I GCAGC 1 cut(s) 656
LweI GCATC 2 cut(s) 386, 640
MaeI CTAG 4 cut(s) 27, 113, 224, 735
MaeII ACGT 3 cut(s) 286, 309, 573
MaeIII GTNAC 2 cut(s) 352, 861
MalI GATC 7 cut(s) 164, 176, 343, 478, 514, 526, 975
MboI GATC 7 cut(s) 162, 174, 341, 476, 512, 524, 973
MboII GAAGA 4 cut(s) 51, 304, 336, 744
MflI RGATCY 2 cut(s) 174, 341
MhlI GDGCHC 4 cut(s) 337, 719, 792, 994
MluCI AATT 4 cut(s) 7, 316, 599, 887
MlyI GAGTC 2 cut(s) 539, 677
MmeI TCCRAC 3 cut(s) 129, 208, 755
MseI TTAA 2 cut(s) 72, 420
MspCI CTTAAG 1 cut(s) 71
MspI CCGG 2 cut(s) 641, 698
MspR9I CCNGG 2 cut(s) 699, 774
MvaI CCWGG 1 cut(s) 774
MwoI GCNNNNNNNGC 3 cut(s) 241, 517, 650
NciI CCSGG 1 cut(s) 699
NcoI CCATGG 1 cut(s) 756
NdeII GATC 7 cut(s) 162, 174, 341, 476, 512, 524, 973
NlaIII CATG 7 cut(s) 37, 98, 275, 341, 473, 760, 919
NlaIV GGNNCC 6 cut(s) 16, 458, 558, 717, 729, 804
NmuCI GTSAC 1 cut(s) 352
NspV TTCGAA 1 cut(s) 851
PceI AGGCCT 1 cut(s) 185
PcsI WCGNNNNNNNCGW 1 cut(s) 508
PfeI GAWTC 5 cut(s) 295, 371, 562, 583, 623
PkrI GCNGC 1 cut(s) 646
Ple19I CGATCG 1 cut(s) 515
PleI GAGTC 2 cut(s) 539, 677
PpsI GAGTC 2 cut(s) 539, 677
Psp1406I AACGTT 2 cut(s) 286, 309
Psp6I CCWGG 1 cut(s) 772
PspGI CCWGG 1 cut(s) 772
PspN4I GGNNCC 6 cut(s) 16, 458, 558, 717, 729, 804
PspOMI GGGCCC 1 cut(s) 715
PspPI GGNCC 5 cut(s) 321, 328, 409, 715, 716
PstNI CAGNNNCTG 1 cut(s) 380
PsuI RGATCY 2 cut(s) 174, 341
PvuI CGATCG 1 cut(s) 515
RsaI GTAC 4 cut(s) 93, 403, 552, 609
RsaNI GTAC 4 cut(s) 92, 402, 551, 608
SaqAI TTAA 2 cut(s) 72, 420
SatI GCNGC 1 cut(s) 645
Sau3AI GATC 7 cut(s) 162, 174, 341, 476, 512, 524, 973
Sau96I GGNCC 5 cut(s) 321, 328, 409, 715, 716
SchI GAGTC 2 cut(s) 539, 677
ScrFI CCNGG 2 cut(s) 699, 774
SduI GDGCHC 4 cut(s) 337, 719, 792, 994
SfaNI GCATC 2 cut(s) 386, 640
SfcI CTRYAG 1 cut(s) 831
SfuI TTCGAA 1 cut(s) 851
SinI GGWCC 1 cut(s) 321
SmlI CTYRAG 2 cut(s) 71, 676
SmoI CTYRAG 2 cut(s) 71, 676
SpeI ACTAGT 1 cut(s) 734
Sse9I AATT 4 cut(s) 7, 316, 599, 887
SseBI AGGCCT 1 cut(s) 185
SsiI CCGC 5 cut(s) 47, 399, 713, 807, 988
SspMI CTAG 4 cut(s) 27, 113, 224, 735
StuI AGGCCT 1 cut(s) 185
StyD4I CCNGG 2 cut(s) 697, 772
StyI CCWWGG 2 cut(s) 112, 756
TaaI ACNGT 3 cut(s) 169, 361, 406
TaiI ACGT 3 cut(s) 289, 312, 576
TaqI TCGA 3 cut(s) 475, 515, 851
TasI AATT 4 cut(s) 7, 316, 599, 887
TatI WGTACW 2 cut(s) 91, 550
TfiI GAWTC 5 cut(s) 295, 371, 562, 583, 623
Tru1I TTAA 2 cut(s) 72, 420
Tru9I TTAA 2 cut(s) 72, 420
TscAI CASTG 4 cut(s) 381, 489, 534, 903
TseFI GTSAC 1 cut(s) 352
TseI GCWGC 1 cut(s) 644
Tsp45I GTSAC 1 cut(s) 352
TspDTI ATGAA 3 cut(s) 288, 384, 932
TspGWI ACGGA 4 cut(s) 171, 313, 459, 557
TspRI CASTG 4 cut(s) 381, 489, 534, 903
Vha464I CTTAAG 1 cut(s) 71
VneI GTGCAC 1 cut(s) 788
VpaK11BI GGWCC 1 cut(s) 321
XapI RAATTY 1 cut(s) 887
XcmI CCANNNNNNNNNTGG 1 cut(s) 467
XmaJI CCTAGG 1 cut(s) 112
XspI CTAG 4 cut(s) 27, 113, 224, 735
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.