Ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 1 cut(s) | 46 |
| AciI | CCGC | 2 cut(s) | 124, 503 |
| AclWI | GGATC | 1 cut(s) | 595 |
| AcsI | RAATTY | 2 cut(s) | 9, 220 |
| AcuI | CTGAAG | 1 cut(s) | 375 |
| AfaI | GTAC | 1 cut(s) | 411 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 46, 130 |
| AgsI | TTSAA | 2 cut(s) | 143, 495 |
| AjnI | CCWGG | 1 cut(s) | 414 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 10, 42 |
| AleI | CACNNNNGTG | 1 cut(s) | 356 |
| AluBI | AGCT | 1 cut(s) | 329 |
| AluI | AGCT | 1 cut(s) | 329 |
| Alw26I | GTCTC | 1 cut(s) | 349 |
| AlwI | GGATC | 1 cut(s) | 595 |
| AoxI | GGCC | 1 cut(s) | 482 |
| ApeKI | GCWGC | 1 cut(s) | 281 |
| ApoI | RAATTY | 2 cut(s) | 9, 220 |
| AspS9I | GGNCC | 1 cut(s) | 482 |
| AsuHPI | GGTGA | 1 cut(s) | 620 |
| BauI | CACGAG | 1 cut(s) | 267 |
| BbvI | GCAGC | 1 cut(s) | 268 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 263, 297 |
| BciT130I | CCWGG | 1 cut(s) | 416 |
| BciVI | GTATCC | 1 cut(s) | 367 |
| BcoDI | GTCTC | 1 cut(s) | 349 |
| BfuI | GTATCC | 1 cut(s) | 367 |
| BglII | AGATCT | 2 cut(s) | 154, 554 |
| BisI | GCNGC | 1 cut(s) | 282 |
| BlsI | GCNGC | 1 cut(s) | 283 |
| Bme1390I | CCNGG | 1 cut(s) | 416 |
| BmgT120I | GGNCC | 1 cut(s) | 482 |
| BmiI | GGNNCC | 1 cut(s) | 420 |
| BmrFI | CCNGG | 1 cut(s) | 416 |
| BmsI | GCATC | 2 cut(s) | 40, 135 |
| BpuEI | CTTGAG | 1 cut(s) | 413 |
| BsaJI | CCNNGG | 2 cut(s) | 58, 604 |
| BsaWI | WCCGGW | 1 cut(s) | 370 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 46, 130 |
| Bse3DI | GCAATG | 1 cut(s) | 74 |
| BseBI | CCWGG | 1 cut(s) | 416 |
| BseDI | CCNNGG | 2 cut(s) | 58, 604 |
| BseGI | GGATG | 1 cut(s) | 31 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 46, 130 |
| BseMI | GCAATG | 1 cut(s) | 74 |
| BseMII | CTCAG | 1 cut(s) | 369 |
| BseXI | GCAGC | 1 cut(s) | 268 |
| BshFI | GGCC | 1 cut(s) | 484 |
| BsiSI | CCGG | 1 cut(s) | 371 |
| BslFI | GGGAC | 1 cut(s) | 82 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 46, 130 |
| BsmAI | GTCTC | 1 cut(s) | 349 |
| BsmFI | GGGAC | 1 cut(s) | 82 |
| BsnI | GGCC | 1 cut(s) | 484 |
| Bsp143I | GATC | 3 cut(s) | 154, 554, 600 |
| BspACI | CCGC | 2 cut(s) | 124, 503 |
| BspANI | GGCC | 1 cut(s) | 484 |
| BspCNI | CTCAG | 1 cut(s) | 370 |
| BspLI | GGNNCC | 1 cut(s) | 420 |
| BspPI | GGATC | 1 cut(s) | 595 |
| BsrDI | GCAATG | 1 cut(s) | 74 |
| BssECI | CCNNGG | 2 cut(s) | 58, 604 |
| BssMI | GATC | 3 cut(s) | 154, 554, 600 |
| BssSI | CACGAG | 1 cut(s) | 267 |
| BssT1I | CCWWGG | 1 cut(s) | 604 |
| Bst2BI | CACGAG | 1 cut(s) | 267 |
| Bst2UI | CCWGG | 1 cut(s) | 416 |
| Bst4CI | ACNGT | 2 cut(s) | 499, 583 |
| BstC8I | GCNNGC | 2 cut(s) | 124, 286 |
| BstDEI | CTNAG | 2 cut(s) | 146, 378 |
| BstDSI | CCRYGG | 1 cut(s) | 58 |
| BstF5I | GGATG | 1 cut(s) | 31 |
| BstKTI | GATC | 3 cut(s) | 157, 557, 603 |
| BstMAI | GTCTC | 1 cut(s) | 349 |
| BstMBI | GATC | 3 cut(s) | 154, 554, 600 |
| BstNI | CCWGG | 1 cut(s) | 416 |
| BstNSI | RCATGY | 1 cut(s) | 564 |
| BstSCI | CCNGG | 1 cut(s) | 414 |
| BstV1I | GCAGC | 1 cut(s) | 268 |
| BstX2I | RGATCY | 3 cut(s) | 154, 554, 600 |
| BstYI | RGATCY | 3 cut(s) | 154, 554, 600 |
| BsuI | GTATCC | 1 cut(s) | 367 |
| BsuRI | GGCC | 1 cut(s) | 484 |
| BtgI | CCRYGG | 1 cut(s) | 58 |
| BtsCI | GGATG | 1 cut(s) | 31 |
| BtsIMutI | CAGTG | 2 cut(s) | 351, 504 |
| Cac8I | GCNNGC | 2 cut(s) | 124, 286 |
| Cfr13I | GGNCC | 1 cut(s) | 482 |
| CseI | GACGC | 1 cut(s) | 92 |
| Csp6I | GTAC | 1 cut(s) | 410 |
| CviAII | CATG | 6 cut(s) | 41, 46, 191, 278, 404, 561 |
| CviJI | RGCY | 3 cut(s) | 329, 421, 484 |
| CviKI_1 | RGCY | 3 cut(s) | 329, 421, 484 |
| CviQI | GTAC | 1 cut(s) | 410 |
| DdeI | CTNAG | 2 cut(s) | 146, 378 |
| DpnI | GATC | 3 cut(s) | 156, 556, 602 |
| DpnII | GATC | 3 cut(s) | 154, 554, 600 |
| Eco130I | CCWWGG | 1 cut(s) | 604 |
| Eco57I | CTGAAG | 1 cut(s) | 375 |
| EcoRII | CCWGG | 1 cut(s) | 414 |
| EcoT14I | CCWWGG | 1 cut(s) | 604 |
| ErhI | CCWWGG | 1 cut(s) | 604 |
| FaeI | CATG | 6 cut(s) | 44, 49, 194, 281, 407, 564 |
| FaqI | GGGAC | 1 cut(s) | 82 |
| FatI | CATG | 6 cut(s) | 40, 45, 190, 277, 403, 560 |
| FauI | CCCGC | 1 cut(s) | 131 |
| Fnu4HI | GCNGC | 1 cut(s) | 282 |
| FokI | GGATG | 1 cut(s) | 18 |
| Fsp4HI | GCNGC | 1 cut(s) | 282 |
| GluI | GCNGC | 1 cut(s) | 282 |
| HaeIII | GGCC | 1 cut(s) | 484 |
| HapII | CCGG | 1 cut(s) | 371 |
| HgaI | GACGC | 1 cut(s) | 92 |
| Hin1II | CATG | 6 cut(s) | 44, 49, 194, 281, 407, 564 |
| HincII | GTYRAC | 1 cut(s) | 439 |
| HindII | GTYRAC | 1 cut(s) | 439 |
| HinfI | GANTC | 3 cut(s) | 321, 458, 491 |
| HpaII | CCGG | 1 cut(s) | 371 |
| HphI | GGTGA | 1 cut(s) | 620 |
| Hpy166II | GTNNAC | 3 cut(s) | 412, 439, 524 |
| Hpy188I | TCNGA | 1 cut(s) | 336 |
| Hpy188III | TCNNGA | 5 cut(s) | 152, 255, 269, 311, 392 |
| Hpy8I | GTNNAC | 3 cut(s) | 412, 439, 524 |
| HpyCH4III | ACNGT | 2 cut(s) | 499, 583 |
| HpyCH4V | TGCA | 5 cut(s) | 79, 284, 403, 560, 616 |
| HpyF3I | CTNAG | 2 cut(s) | 146, 378 |
| Hsp92II | CATG | 6 cut(s) | 44, 49, 194, 281, 407, 564 |
| Kzo9I | GATC | 3 cut(s) | 154, 554, 600 |
| LmnI | GCTCC | 2 cut(s) | 100, 418 |
| LpnPI | CCDG | 4 cut(s) | 230, 384, 401, 428 |
| Lsp1109I | GCAGC | 1 cut(s) | 268 |
| LweI | GCATC | 2 cut(s) | 40, 135 |
| MaeIII | GTNAC | 5 cut(s) | 269, 358, 544, 577, 587 |
| MalI | GATC | 3 cut(s) | 156, 556, 602 |
| MboI | GATC | 3 cut(s) | 154, 554, 600 |
| MboII | GAAGA | 1 cut(s) | 18 |
| MflI | RGATCY | 3 cut(s) | 154, 554, 600 |
| MluCI | AATT | 4 cut(s) | 9, 107, 220, 530 |
| MnlI | CCTC | 4 cut(s) | 45, 90, 251, 400 |
| MseI | TTAA | 3 cut(s) | 204, 237, 573 |
| MslI | CAYNNNNRTG | 1 cut(s) | 356 |
| MspI | CCGG | 1 cut(s) | 371 |
| MspR9I | CCNGG | 1 cut(s) | 416 |
| MvaI | CCWGG | 1 cut(s) | 416 |
| NdeII | GATC | 3 cut(s) | 154, 554, 600 |
| NlaIII | CATG | 6 cut(s) | 44, 49, 194, 281, 407, 564 |
| NlaIV | GGNNCC | 1 cut(s) | 420 |
| NmuCI | GTSAC | 2 cut(s) | 269, 358 |
| NspI | RCATGY | 1 cut(s) | 564 |
| OliI | CACNNNNGTG | 1 cut(s) | 356 |
| PfeI | GAWTC | 3 cut(s) | 321, 458, 491 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 46 |
| PkrI | GCNGC | 1 cut(s) | 283 |
| Psp6I | CCWGG | 1 cut(s) | 414 |
| PspGI | CCWGG | 1 cut(s) | 414 |
| PspN4I | GGNNCC | 1 cut(s) | 420 |
| PspPI | GGNCC | 1 cut(s) | 482 |
| PsuI | RGATCY | 3 cut(s) | 154, 554, 600 |
| RsaI | GTAC | 1 cut(s) | 411 |
| RsaNI | GTAC | 1 cut(s) | 410 |
| RseI | CAYNNNNRTG | 1 cut(s) | 356 |
| SaqAI | TTAA | 3 cut(s) | 204, 237, 573 |
| SatI | GCNGC | 1 cut(s) | 282 |
| Sau3AI | GATC | 3 cut(s) | 154, 554, 600 |
| Sau96I | GGNCC | 1 cut(s) | 482 |
| ScrFI | CCNGG | 1 cut(s) | 416 |
| SetI | ASST | 4 cut(s) | 187, 262, 331, 411 |
| SfaNI | GCATC | 2 cut(s) | 40, 135 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 356 |
| SmlI | CTYRAG | 1 cut(s) | 392 |
| SmoI | CTYRAG | 1 cut(s) | 392 |
| Sse9I | AATT | 4 cut(s) | 9, 107, 220, 530 |
| SsiI | CCGC | 2 cut(s) | 124, 503 |
| SspI | AATATT | 3 cut(s) | 208, 340, 568 |
| StyD4I | CCNGG | 1 cut(s) | 414 |
| StyI | CCWWGG | 1 cut(s) | 604 |
| TaaI | ACNGT | 2 cut(s) | 499, 583 |
| TasI | AATT | 4 cut(s) | 9, 107, 220, 530 |
| TfiI | GAWTC | 3 cut(s) | 321, 458, 491 |
| Tru1I | TTAA | 3 cut(s) | 204, 237, 573 |
| Tru9I | TTAA | 3 cut(s) | 204, 237, 573 |
| TscAI | CASTG | 2 cut(s) | 358, 504 |
| TseFI | GTSAC | 2 cut(s) | 269, 358 |
| TseI | GCWGC | 1 cut(s) | 281 |
| Tsp45I | GTSAC | 2 cut(s) | 269, 358 |
| TspGWI | ACGGA | 1 cut(s) | 296 |
| TspRI | CASTG | 2 cut(s) | 358, 504 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 46 |
| XapI | RAATTY | 2 cut(s) | 9, 220 |
| XceI | RCATGY | 1 cut(s) | 564 |