Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb4

Orthogroup ID

OG0004671

Physical Location & Seq

Genomic Coordinates Forward (+)

14413304 .. 14426808

Gene Structure 13505 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_4g10700.t4

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2304 bp

ATGGATGCTTCGGATGTATGTCCGACCGAGGATGCCATTCAGGCTTTTTTGGAGTACTTAGTTGACCCCATGCTTCCAACAAAATCTTCTATGCGGGATACCCCATCACTCTCTCTACAAGAATCGGTTGCCAAACAGGTGCATGCTGTTGTGCTACTATACAACTATCACAGAAAGCAATATCCGAAGCTAGAGGTTTTGCGTTTTAGTTCGTTTTGCAAGTTGGTTGTGGATCTGAAACCAGCCTTGCTGGCTCATATGACATTCATGCAAATGCCAAGTGATACTGAGTTGGATGACCTGGAGAAACAACTTTCAGTCACCGAAAGAACAATAATGGATGCATGTGAAATATCTACAAGTTTAGATGCATCCATGGGCACTCCAAACACTGAGGGCTGGCCAATTTCCAAAGTTACGGTTCTTCTAGTTGACTCCAAGAAGGAGAACTGCTTCTTGCAATTCGGTTCCATAACCCAGGGGGTTTGGTCGGTCATTGATAAAAATTTGGAGGTTAGAGATCGCAGTTCAAATGATACAAGGGAGTTAACACATATCAACAAAAAGAAAAGATTCACTGGAAATTCTTCTAGAGGAGAACTGAGGATTGATGAAACTAGTTGCCGAAAACTGGCATATTCAGCAATTACAGAGGCCACAGATATTAATCAGAATGATCTTCTGGTTTTGGAAAGCCATGTTGTATTTTCCCATAGTAAAGAAAAGGCAGCGGCTTGCTTTTTCATAGTTCAGTGTACCCAATCAGGCAAGGATGGTATTATTCAATTTCCTATTAAAGATGTTATTGACAGCCTGCAGGGTCCTCTGGTCACAAAGAGTTCCAGCTGCTGGACAGTCACAACAGTTGTTGAGTATCTCCATATGCTTCCTTATGCTGAGATTTTGACCGACTGGTTTCATAGGAGAGAATTCTCAAAAGGTTTGCAAGATTCAAGGCTAGGAGCGGGAAATGTAAATGTGACTAGCCCTAATAGGACTGAAACACCTCACAAATCAGAAATTTGCAAAACTCAAGAGAAGTCTCATGTAAATGGTGTTCTAATTGAGGATATTGGTAGCAACACAAGATGTCCTGAACCCCAATCATGGAAGCAGAAAGATATCACTGGATGTTGCAAGATAGATCTGGCTCATGCTTTCAATGGGTCTCAAGAAATGGAGGTCAAGGACTCTTCCATGGTTGCCTCAAGGAAGGAAAAAAGTTGTAAAAAAATTTCAAGATACATTCAAGCTGTCAGCCACCAAGATGAAACGCATTCCTGTATCAAAAGTGAAATTCCCAAAACACAAGGCAAGTTGTCTCATGTAAATCACATCACGATAAAAGATATTGGGAACAACATTAGCAGTTCTACACCTCAATCATATAAGAAGAAAGATACCACCGTATATAAAAATACAAGTCCAACTGAAGCTTTCCATGGGCCTCAGAAATTGTGGTTGGATGACTCTCCCATGGTCCCGTTGCAGAATGTAGAAAGCTGTAAGAAAAGTTTGAGCACCATTCAAGTTAACCAGAAAAAAAAGATATCCTTGATTGGGACTGAACTAAATGGCTCAGCAACTAATAATAAGGTTGAGACTGTGAACCGGACAAGTCCATCCCTTACTGACCGCAGAGTTACAAAAGTTGCTGGGAACAAAACTTGTTATATTAACCCATCATCTCAAGAAAGTAAAAGTGGGCATACCTTTGCCACCTCTCAATCAAATTTAAATGATTTTGACAAGCTACAAAATACTATAGCGTCACAAGAACAGATCTTGTCACAAACTGCTTGGAACGTTCTTATGAAAAAAAGGAATGAGCTGTCTCTTAAGAAGCGCAATATAGAGGATGAGCTTGCTCGCTGTGAAAAAGATATCCAGACAATTATAAATGGTGGCCAAGATGGCTCAGCAGTAATAGTCAAGTCTGTTATAGAAGGTTGTAATGATGGATATCTTAGAAATGAAAGGACTCATACACTGCAAGAAGAGGAATGGTCTCCTACATCCATCAAAAGGAAGAGGCTGTCAGAGGCTATTCTTGACAAGCAAAATCGATGCCAGGAATTGGATGAGATATGTTCCAAAAACAGTTGGGTGTTACCGGTTTATTGTGTGTCCCTATCAGATGGTGGATTCCAAGCTAATGTAACCGTAGAAGGTCTGGACTTCAAGTGTTTAAAAGAGGGTGACCCATGTTCTGGTCCTAGTGAAGCAAGAGAATCAGCTGCATTTCAAATGTTGGAAAAGTTGCGGAGCATGGCTGGCCAAGCCAAAAAAGTTGCAGGTCAATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DND1_DSRM

Protein Analysis

768

Amino Acids

85.66

Weight (kDa)

7.21

Isoelectric Point (pI)

47.45

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DUF7913	PF25500	32 - 150	7e-52	Domain of unknown function (DUF7913)
DUF7915	PF25502	186 - 335	8.7e-61	Domain of unknown function (DUF7915)
DND1_DSRM	PF14709	718 - 781	1.1e-06	double strand RNA binding domain from DEAD END PROTEIN 1

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004671)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G05950 AT1G05950 AT1G05950 AT1G05950 AT1G05950
fragaria_vesca	FvH4_4g10700 FvH4_4g10700 FvH4_4g10700 FvH4_4g10700 FvH4_4g10700 FvH4_4g10700 FvH4_4g10700 FvH4_4g10700 FvH4_4g10700 FvH4_4g10700
malus_domestica	MD04G1007700.v1.1
prunus_persica	Prupe.1G191700_v2.0.a1 Prupe.1G191700_v2.0.a1 Prupe.1G191700_v2.0.a1
rosa_chinensis	RchiOBHm_Chr4g0407011
rosa_laevigata	RLG00000008744
rosa_multiflora	Rmu_sc0000600.1_g000013
rosa_roxburghii	Rroxscaffold_5G00351720
rosa_rugosa	Rorug04G0076500 Rorug04G0076600 Rorug04G0076700
rosa_samantha	Rh4AG142000 Rh4BG139200 Rh4CG148600 Rh4DG136200
rosa_wichuraiana	Rw4G011570

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1898
Acc36I	ACCTGC	1 cut(s)	2285
AccB7I	CCANNNNNTGG	3 cut(s)	849, 2077, 2210
AccBSI	CCGCTC	1 cut(s)	965
AciI	CCGC	5 cut(s)	94, 731, 965, 1636, 2263
AclI	AACGTT	1 cut(s)	1806
AclWI	GGATC	1 cut(s)	240
AcoI	YGGCCR	3 cut(s)	401, 1906, 2275
AcsI	RAATTY	7 cut(s)	505, 583, 929, 1020, 1233, 1296, 1732
AcuI	CTGAAG	1 cut(s)	1452
AfaI	GTAC	2 cut(s)	56, 757
AfiI	CCNNNNNNNGG	7 cut(s)	631, 849, 1107, 1560, 2025, 2077, 2210
AflII	CTTAAG	1 cut(s)	1838
AgeI	ACCGGT	1 cut(s)	2113
AgsI	TTSAA	9 cut(s)	531, 785, 954, 1162, 1239, 1250, 1529, 2182, 2246
AhlI	ACTAGT	1 cut(s)	617
AjnI	CCWGG	3 cut(s)	300, 477, 2070
AjuI	GAANNNNNNNTTGG	4 cut(s)	70, 102, 1445, 1477
Alw21I	GWGCWC	1 cut(s)	1523
Alw26I	GTCTC	6 cut(s)	1047, 1173, 1326, 1595, 1839, 2013
AlwI	GGATC	1 cut(s)	240
AlwNI	CAGNNNCTG	1 cut(s)	849
AoxI	GGCC	5 cut(s)	401, 654, 1445, 1906, 2275
ApeKI	GCWGC	3 cut(s)	728, 846, 2237
ApoI	RAATTY	7 cut(s)	505, 583, 929, 1020, 1233, 1296, 1732
AseI	ATTAAT	1 cut(s)	666
AsiGI	ACCGGT	1 cut(s)	2113
Asp700I	GAANNNNTTC	3 cut(s)	452, 572, 586
AspLEI	GCGC	1 cut(s)	1848
AspS9I	GGNCC	4 cut(s)	821, 1445, 1480, 2213
AsuHPI	GGTGA	2 cut(s)	313, 2210
AvaII	GGWCC	3 cut(s)	821, 1480, 2213
BaeGI	GKGCMC	1 cut(s)	383
BaeI	ACNNNNGTAYC	2 cut(s)	1392, 1425
BalI	TGGCCA	3 cut(s)	403, 1908, 2277
Bbv12I	GWGCWC	1 cut(s)	1523
BbvI	GCAGC	3 cut(s)	740, 833, 2224
BccI	CCATC	8 cut(s)	112, 767, 1630, 1690, 1907, 1952, 2027, 2132
BciT130I	CCWGG	3 cut(s)	302, 479, 2072
BciVI	GTATCC	1 cut(s)	91
BcoDI	GTCTC	6 cut(s)	1047, 1173, 1326, 1595, 1839, 2013
BcuI	ACTAGT	1 cut(s)	617
BfaI	CTAG	7 cut(s)	191, 428, 591, 618, 959, 984, 2217
BfmI	CTRYAG	2 cut(s)	815, 1764
BfrI	CTTAAG	1 cut(s)	1838
BfuAI	ACCTGC	1 cut(s)	2285
BfuI	GTATCC	1 cut(s)	91
BglI	GCCNNNNNGGC	3 cut(s)	41, 251, 1914
BglII	AGATCT	2 cut(s)	1144, 1782
BisI	GCNGC	4 cut(s)	729, 732, 847, 2238
BlpI	GCTNAGC	2 cut(s)	1579, 1918
BlsI	GCNGC	4 cut(s)	730, 733, 848, 2239
BmcAI	AGTACT	1 cut(s)	56
Bme1390I	CCNGG	3 cut(s)	302, 479, 2072
Bme18I	GGWCC	3 cut(s)	821, 1480, 2213
BmgT120I	GGNCC	4 cut(s)	821, 1445, 1480, 2213
BmiI	GGNNCC	3 cut(s)	469, 822, 1482
BmrFI	CCNGG	3 cut(s)	302, 479, 2072
BmsI	GCATC	5 cut(s)	22, 331, 358, 380, 2057
BpmI	CTGGAG	1 cut(s)	323
Bpu1102I	GCTNAGC	2 cut(s)	1579, 1918
BpuEI	CTTGAG	4 cut(s)	1017, 1155, 1192, 1674
Bsa29I	ATCGAT	1 cut(s)	2065
BsaBI	GATNNNNATC	2 cut(s)	666, 1962
BsaI	GGTCTC	2 cut(s)	1173, 2013
BsaJI	CCNNGG	7 cut(s)	27, 375, 477, 478, 1197, 1441, 1476
BsaWI	WCCGGW	2 cut(s)	1611, 2113
Bsc4I	CCNNNNNNNGG	7 cut(s)	631, 849, 1107, 1560, 2025, 2077, 2210
Bse118I	RCCGGY	1 cut(s)	2113
Bse1I	ACTGG	4 cut(s)	583, 636, 917, 1132
Bse8I	GATNNNNATC	2 cut(s)	666, 1962
BseBI	CCWGG	3 cut(s)	302, 479, 2072
BseCI	ATCGAT	1 cut(s)	2065
BseDI	CCNNGG	7 cut(s)	27, 375, 477, 478, 1197, 1441, 1476
BseJI	GATNNNNATC	2 cut(s)	666, 1962
BseLI	CCNNNNNNNGG	7 cut(s)	631, 849, 1107, 1560, 2025, 2077, 2210
BseMII	CTCAG	7 cut(s)	279, 384, 593, 888, 1463, 1593, 1932
BseNI	ACTGG	4 cut(s)	583, 636, 917, 1132
BseRI	GAGGAG	1 cut(s)	609
BseSI	GKGCMC	1 cut(s)	383
BseXI	GCAGC	3 cut(s)	740, 833, 2224
BseYI	CCCAGC	1 cut(s)	1655
Bsh1285I	CGRYCG	1 cut(s)	27
BshFI	GGCC	5 cut(s)	403, 656, 1447, 1908, 2277
BshTI	ACCGGT	1 cut(s)	2113
BshVI	ATCGAT	1 cut(s)	2065
BsiEI	CGRYCG	1 cut(s)	27
BsiHKAI	GWGCWC	1 cut(s)	1523
BsiSI	CCGG	2 cut(s)	1612, 2114
BslFI	GGGAC	3 cut(s)	1466, 1576, 2113
BslI	CCNNNNNNNGG	7 cut(s)	631, 849, 1107, 1560, 2025, 2077, 2210
BsmAI	GTCTC	6 cut(s)	1047, 1173, 1326, 1595, 1839, 2013
BsmFI	GGGAC	3 cut(s)	1466, 1576, 2113
BsmI	GAATGC	1 cut(s)	1276
BsnI	GGCC	5 cut(s)	403, 656, 1447, 1908, 2277
Bso31I	GGTCTC	2 cut(s)	1173, 2013
Bsp1286I	GDGCHC	2 cut(s)	383, 1523
Bsp143I	GATC	5 cut(s)	232, 520, 676, 1144, 1782
Bsp1720I	GCTNAGC	2 cut(s)	1579, 1918
Bsp19I	CCATGG	4 cut(s)	375, 1197, 1441, 1476
BspACI	CCGC	5 cut(s)	94, 731, 965, 1636, 2263
BspANI	GGCC	5 cut(s)	403, 656, 1447, 1908, 2277
BspCNI	CTCAG	7 cut(s)	280, 385, 594, 889, 1462, 1592, 1931
BspDI	ATCGAT	1 cut(s)	2065
BspLI	GGNNCC	3 cut(s)	469, 822, 1482
BspMAI	CTGCAG	1 cut(s)	819
BspMI	ACCTGC	1 cut(s)	2285
BspPI	GGATC	1 cut(s)	240
BspTI	CTTAAG	1 cut(s)	1838
BspTNI	GGTCTC	2 cut(s)	1173, 2013
BsrBI	CCGCTC	1 cut(s)	965
BsrFI	RCCGGY	1 cut(s)	2113
BsrI	ACTGG	4 cut(s)	583, 636, 917, 1132
BssAI	RCCGGY	1 cut(s)	2113
BssECI	CCNNGG	7 cut(s)	27, 375, 477, 478, 1197, 1441, 1476
BssMI	GATC	5 cut(s)	232, 520, 676, 1144, 1782
BssT1I	CCWWGG	4 cut(s)	375, 1197, 1441, 1476
Bst2UI	CCWGG	3 cut(s)	302, 479, 2072
Bst4CI	ACNGT	7 cut(s)	421, 856, 865, 1408, 1606, 2102, 2164
Bst6I	CTCTTC	3 cut(s)	1198, 1992, 2024
BstAFI	CTTAAG	1 cut(s)	1838
BstC8I	GCNNGC	8 cut(s)	144, 252, 401, 736, 815, 1866, 1870, 2275
BstDEI	CTNAG	9 cut(s)	58, 288, 393, 602, 897, 1449, 1579, 1918, 1967
BstDSI	CCRYGG	4 cut(s)	375, 1197, 1441, 1476
BstEII	GGTNACC	1 cut(s)	2198
BstHHI	GCGC	1 cut(s)	1848
BstKTI	GATC	5 cut(s)	235, 523, 679, 1147, 1785
BstMAI	GTCTC	6 cut(s)	1047, 1173, 1326, 1595, 1839, 2013
BstMBI	GATC	5 cut(s)	232, 520, 676, 1144, 1782
BstMCI	CGRYCG	1 cut(s)	27
BstMWI	GCNNNNNNNGC	6 cut(s)	41, 251, 641, 1914, 2274, 2279
BstNI	CCWGG	3 cut(s)	302, 479, 2072
BstNSI	RCATGY	2 cut(s)	146, 348
BstPI	GGTNACC	1 cut(s)	2198
BstSCI	CCNGG	3 cut(s)	300, 477, 2070
BstSFI	CTRYAG	2 cut(s)	815, 1764
BstSLI	GKGCMC	1 cut(s)	383
BstV1I	GCAGC	3 cut(s)	740, 833, 2224
BstX2I	RGATCY	3 cut(s)	232, 1144, 1782
BstYI	RGATCY	3 cut(s)	232, 1144, 1782
Bsu15I	ATCGAT	1 cut(s)	2065
BsuI	GTATCC	1 cut(s)	91
BsuRI	GGCC	5 cut(s)	403, 656, 1447, 1908, 2277
BsuTUI	ATCGAT	1 cut(s)	2065
BtgI	CCRYGG	4 cut(s)	375, 1197, 1441, 1476
BtsI	GCAGTG	1 cut(s)	1988
BtsIMutI	CAGTG	5 cut(s)	390, 576, 758, 1125, 1988
BveI	ACCTGC	1 cut(s)	2285
Cac8I	GCNNGC	8 cut(s)	144, 252, 401, 736, 815, 1866, 1870, 2275
CaiI	CAGNNNCTG	1 cut(s)	849
CfoI	GCGC	1 cut(s)	1848
Cfr10I	RCCGGY	1 cut(s)	2113
Cfr13I	GGNCC	4 cut(s)	821, 1445, 1480, 2213
ClaI	ATCGAT	1 cut(s)	2065
CseI	GACGC	1 cut(s)	1758
Csp6I	GTAC	2 cut(s)	55, 756
CspAI	ACCGGT	1 cut(s)	2113
CviQI	GTAC	2 cut(s)	55, 756
DdeI	CTNAG	9 cut(s)	58, 288, 393, 602, 897, 1449, 1579, 1918, 1967
DpnI	GATC	5 cut(s)	234, 522, 678, 1146, 1784
DpnII	GATC	5 cut(s)	232, 520, 676, 1144, 1782
DraI	TTTAAA	2 cut(s)	1737, 2190
EaeI	YGGCCR	3 cut(s)	401, 1906, 2275
Eam1104I	CTCTTC	3 cut(s)	1198, 1992, 2024
EarI	CTCTTC	3 cut(s)	1198, 1992, 2024
Eco130I	CCWWGG	4 cut(s)	375, 1197, 1441, 1476
Eco31I	GGTCTC	2 cut(s)	1173, 2013
Eco32I	GATATC	4 cut(s)	1123, 1551, 1885, 1964
Eco47I	GGWCC	3 cut(s)	821, 1480, 2213
Eco57I	CTGAAG	1 cut(s)	1452
Eco91I	GGTNACC	1 cut(s)	2198
EcoO109I	RGGNCCY	1 cut(s)	821
EcoO65I	GGTNACC	1 cut(s)	2198
EcoRI	GAATTC	1 cut(s)	929
EcoRII	CCWGG	3 cut(s)	300, 477, 2070
EcoRV	GATATC	4 cut(s)	1123, 1551, 1885, 1964
EcoT14I	CCWWGG	4 cut(s)	375, 1197, 1441, 1476
EcoT22I	ATGCAT	2 cut(s)	346, 373
ErhI	CCWWGG	4 cut(s)	375, 1197, 1441, 1476
FalI	AAGNNNNNCTT	2 cut(s)	1538, 1570
FaqI	GGGAC	3 cut(s)	1466, 1576, 2113
FauI	CCCGC	2 cut(s)	87, 958
FauNDI	CATATG	2 cut(s)	258, 882
Fnu4HI	GCNGC	4 cut(s)	729, 732, 847, 2238
Fsp4HI	GCNGC	4 cut(s)	729, 732, 847, 2238
FspBI	CTAG	7 cut(s)	191, 428, 591, 618, 959, 984, 2217
GlaI	GCGC	1 cut(s)	1847
GluI	GCNGC	4 cut(s)	729, 732, 847, 2238
GsaI	CCCAGC	1 cut(s)	1659
GsuI	CTGGAG	1 cut(s)	323
HaeIII	GGCC	5 cut(s)	403, 656, 1447, 1908, 2277
HapII	CCGG	2 cut(s)	1612, 2114
HgaI	GACGC	1 cut(s)	1758
HhaI	GCGC	1 cut(s)	1848
Hin6I	GCGC	1 cut(s)	1846
HinP1I	GCGC	1 cut(s)	1846
HincII	GTYRAC	4 cut(s)	64, 433, 549, 1534
HindII	GTYRAC	4 cut(s)	64, 433, 549, 1534
HindIII	AAGCTT	1 cut(s)	1434
HinfI	GANTC	9 cut(s)	122, 434, 573, 950, 1190, 1469, 1981, 2145, 2231
HpaI	GTTAAC	2 cut(s)	549, 1534
HpaII	CCGG	2 cut(s)	1612, 2114
HphI	GGTGA	2 cut(s)	313, 2210
Hpy166II	GTNNAC	6 cut(s)	64, 433, 549, 756, 1534, 1609
Hpy188I	TCNGA	9 cut(s)	13, 24, 186, 237, 672, 1018, 1452, 2041, 2137
Hpy8I	GTNNAC	6 cut(s)	64, 433, 549, 756, 1534, 1609
HpyAV	CCTTC	4 cut(s)	436, 1207, 1940, 2162
HpyCH4III	ACNGT	7 cut(s)	421, 856, 865, 1408, 1606, 2102, 2164
HpyCH4IV	ACGT	1 cut(s)	1806
HpyF10VI	GCNNNNNNNGC	6 cut(s)	41, 251, 641, 1914, 2274, 2279
HpyF3I	CTNAG	9 cut(s)	58, 288, 393, 602, 897, 1449, 1579, 1918, 1967
HpySE526I	ACGT	1 cut(s)	1806
HspAI	GCGC	1 cut(s)	1846
KspAI	GTTAAC	2 cut(s)	549, 1534
Kzo9I	GATC	5 cut(s)	232, 520, 676, 1144, 1782
LmnI	GCTCC	2 cut(s)	962, 2265
Lsp1109I	GCAGC	3 cut(s)	740, 833, 2224
LweI	GCATC	5 cut(s)	22, 331, 358, 380, 2057
MaeI	CTAG	7 cut(s)	191, 428, 591, 618, 959, 984, 2217
MaeII	ACGT	1 cut(s)	1806
MalI	GATC	5 cut(s)	234, 522, 678, 1146, 1784
MbiI	CCGCTC	1 cut(s)	965
MboI	GATC	5 cut(s)	232, 520, 676, 1144, 1782
MboII	GAAGA	8 cut(s)	78, 416, 579, 671, 1185, 1405, 2009, 2041
MflI	RGATCY	3 cut(s)	232, 1144, 1782
MhlI	GDGCHC	2 cut(s)	383, 1523
MlsI	TGGCCA	3 cut(s)	403, 1908, 2277
MluNI	TGGCCA	3 cut(s)	403, 1908, 2277
MlyI	GAGTC	4 cut(s)	428, 1184, 1463, 1975
MmeI	TCCRAC	6 cut(s)	47, 101, 273, 1443, 1451, 2232
Mox20I	TGGCCA	3 cut(s)	403, 1908, 2277
Mph1103I	ATGCAT	2 cut(s)	346, 373
MroXI	GAANNNNTTC	3 cut(s)	452, 572, 586
MscI	TGGCCA	3 cut(s)	403, 1908, 2277
MseI	TTAA	8 cut(s)	548, 666, 795, 1533, 1677, 1736, 1839, 2189
MslI	CAYNNNNRTG	3 cut(s)	272, 1050, 1266
Msp20I	TGGCCA	3 cut(s)	403, 1908, 2277
MspA1I	CMGCKG	3 cut(s)	731, 846, 2237
MspCI	CTTAAG	1 cut(s)	1838
MspI	CCGG	2 cut(s)	1612, 2114
MspR9I	CCNGG	3 cut(s)	302, 479, 2072
Mva1269I	GAATGC	1 cut(s)	1276
MvaI	CCWGG	3 cut(s)	302, 479, 2072
MwoI	GCNNNNNNNGC	6 cut(s)	41, 251, 641, 1914, 2274, 2279
NcoI	CCATGG	4 cut(s)	375, 1197, 1441, 1476
NdeI	CATATG	2 cut(s)	258, 882
NdeII	GATC	5 cut(s)	232, 520, 676, 1144, 1782
NlaIV	GGNNCC	3 cut(s)	469, 822, 1482
NmuCI	GTSAC	7 cut(s)	319, 829, 856, 979, 1770, 1788, 2198
NsiI	ATGCAT	2 cut(s)	346, 373
NspI	RCATGY	2 cut(s)	146, 348
PaeI	GCATGC	1 cut(s)	146
PasI	CCCWGGG	1 cut(s)	478
PctI	GAATGC	1 cut(s)	1276
PdmI	GAANNNNTTC	3 cut(s)	452, 572, 586
PfeI	GAWTC	5 cut(s)	122, 573, 950, 2145, 2231
PflMI	CCANNNNNTGG	3 cut(s)	849, 2077, 2210
PinAI	ACCGGT	1 cut(s)	2113
PkrI	GCNGC	4 cut(s)	730, 733, 848, 2239
PleI	GAGTC	4 cut(s)	428, 1184, 1463, 1975
PpsI	GAGTC	4 cut(s)	428, 1184, 1463, 1975
PpuMI	RGGWCCY	1 cut(s)	821
PshBI	ATTAAT	1 cut(s)	666
PsiI	TTATAA	1 cut(s)	1898
Psp1406I	AACGTT	1 cut(s)	1806
Psp5II	RGGWCCY	1 cut(s)	821
Psp6I	CCWGG	3 cut(s)	300, 477, 2070
PspEI	GGTNACC	1 cut(s)	2198
PspFI	CCCAGC	1 cut(s)	1655
PspGI	CCWGG	3 cut(s)	300, 477, 2070
PspN4I	GGNNCC	3 cut(s)	469, 822, 1482
PspPI	GGNCC	4 cut(s)	821, 1445, 1480, 2213
PspPPI	RGGWCCY	1 cut(s)	821
PsrI	GAACNNNNNNTAC	2 cut(s)	1041, 1073
PstI	CTGCAG	1 cut(s)	819
PstNI	CAGNNNCTG	1 cut(s)	849
PsuI	RGATCY	3 cut(s)	232, 1144, 1782
PvuII	CAGCTG	2 cut(s)	846, 2237
RsaI	GTAC	2 cut(s)	56, 757
RsaNI	GTAC	2 cut(s)	55, 756
RseI	CAYNNNNRTG	3 cut(s)	272, 1050, 1266
SaqAI	TTAA	8 cut(s)	548, 666, 795, 1533, 1677, 1736, 1839, 2189
SatI	GCNGC	4 cut(s)	729, 732, 847, 2238
Sau3AI	GATC	5 cut(s)	232, 520, 676, 1144, 1782
Sau96I	GGNCC	4 cut(s)	821, 1445, 1480, 2213
SbfI	CCTGCAGG	1 cut(s)	819
ScaI	AGTACT	1 cut(s)	56
SchI	GAGTC	4 cut(s)	428, 1184, 1463, 1975
ScrFI	CCNGG	3 cut(s)	302, 479, 2072
SdaI	CCTGCAGG	1 cut(s)	819
SduI	GDGCHC	2 cut(s)	383, 1523
SfaNI	GCATC	5 cut(s)	22, 331, 358, 380, 2057
SfcI	CTRYAG	2 cut(s)	815, 1764
SinI	GGWCC	3 cut(s)	821, 1480, 2213
SmiI	ATTTAAAT	1 cut(s)	1737
SmiMI	CAYNNNNRTG	3 cut(s)	272, 1050, 1266
SmlI	CTYRAG	5 cut(s)	1032, 1170, 1207, 1689, 1838
SmoI	CTYRAG	5 cut(s)	1032, 1170, 1207, 1689, 1838
SpeI	ACTAGT	1 cut(s)	617
SphI	GCATGC	1 cut(s)	146
Sse8387I	CCTGCAGG	1 cut(s)	819
SsiI	CCGC	5 cut(s)	94, 731, 965, 1636, 2263
SspMI	CTAG	7 cut(s)	191, 428, 591, 618, 959, 984, 2217
StyD4I	CCNGG	3 cut(s)	300, 477, 2070
StyI	CCWWGG	4 cut(s)	375, 1197, 1441, 1476
SwaI	ATTTAAAT	1 cut(s)	1737
TaaI	ACNGT	7 cut(s)	421, 856, 865, 1408, 1606, 2102, 2164
TaiI	ACGT	1 cut(s)	1809
TaqI	TCGA	1 cut(s)	2065
TaqII	GACCGA	3 cut(s)	41, 481, 923
TatI	WGTACW	1 cut(s)	54
TauI	GCSGC	1 cut(s)	734
TfiI	GAWTC	5 cut(s)	122, 573, 950, 2145, 2231
Tru1I	TTAA	8 cut(s)	548, 666, 795, 1533, 1677, 1736, 1839, 2189
Tru9I	TTAA	8 cut(s)	548, 666, 795, 1533, 1677, 1736, 1839, 2189
TscAI	CASTG	5 cut(s)	397, 583, 758, 1132, 1995
TseFI	GTSAC	7 cut(s)	319, 829, 856, 979, 1770, 1788, 2198
TseI	GCWGC	3 cut(s)	728, 846, 2237
Tsp45I	GTSAC	7 cut(s)	319, 829, 856, 979, 1770, 1788, 2198
TspDTI	ATGAA	7 cut(s)	256, 627, 733, 908, 1284, 1829, 1989
TspRI	CASTG	5 cut(s)	397, 583, 758, 1132, 1995
Van91I	CCANNNNNTGG	3 cut(s)	849, 2077, 2210
Vha464I	CTTAAG	1 cut(s)	1838
VpaK11BI	GGWCC	3 cut(s)	821, 1480, 2213
VspI	ATTAAT	1 cut(s)	666
XapI	RAATTY	7 cut(s)	505, 583, 929, 1020, 1233, 1296, 1732
XbaI	TCTAGA	1 cut(s)	590
XceI	RCATGY	2 cut(s)	146, 348
XmnI	GAANNNNTTC	3 cut(s)	452, 572, 586
XspI	CTAG	7 cut(s)	191, 428, 591, 618, 959, 984, 2217
ZrmI	AGTACT	1 cut(s)	56
Zsp2I	ATGCAT	2 cut(s)	346, 373

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.