Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr4B

Orthogroup ID

OG0004671

Physical Location & Seq

Genomic Coordinates Reverse (-)

24740327 .. 24750596

Gene Structure 10270 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh4BG139200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2145 bp

ATGGTTGCTTCGGATATAATATGTCCAACCGAGGATGCCGTTCAGGCTTTTTTGGACCACTTGGTTGACCCAATACTTCCAGCAAAATCTTCTCTGCGGGATACCCCATCACTCTCTCAACAACAGTCAGTTGCAAAACAGGTGCATGCTGTTGTGCTACTATACAACTACTACCACAGAAAGCAATGTCCAAAGCTAGAGGTTTTGTGTTTTAATTCGTTTTGCAAGTTGGTTTTGGATCTTAAACCAGCCTTGCTGGCTCATATGAAATTTATGAAAAGGTCAGGTGATACTGAATTGGTTGATCAGGAGAAACAACTTTCAGTTACCGAAAGAACAATAATGGAAGCATGTCAAATATCTACAAGTTTAGATGCATCCATGGGTGCTCCAAACACTGAGGGATGGCCAATTACCAAAGTTACAGTTCTTTTAGTTGACTCCAAGAAGGAGAACTGCTATTTGCAATTCAGTTCCAATTCCATGACCCAGGGGGTTTGGTCAGTGATTGATAAAAATTTGGAGGTCAGAGATCACAGTTCAGAAGACACAAGGGGGGTTAAAACATCAATTACTGAGGCTACAGGTATTAGTCAAAATGATCTTCTTGTTTTGGAAAGCCATGTTGTATTTTCGGATAGTAAAGAAAAGGCAGCTGCTTGTTTTTTTATAGTTCAGTGTACCCAATCAGGCAAGGGTGATATTCAGCTTCCTATTAAAGATGTTATTGACAGCCTCCAGGGTCCTCTGGTCACAAAGAATTCCCGCGGCTGGACAGTTACAACAGTTGTTGAGTACTTCCATGTGCTTCCTTATGCTGAGATTTTGTCCGACTGGTTTCATAGGAGAGAATTCTCATATGGTTTGAAAGATTCAAGGCTAGGAGCGGGAAATGTAAATGTGGCTAGCCCTAAAAGGACCGAAACACCTTCCAAACCAGGAATTTGCAAAAATCAAGAGAAGTCTCATGTAATTGATGTTGTGATAGAGGATCTTGGAAGCAACACAAAAAATTCTGAACCCAAATCATGGGAGCAGAAAGATAGCAGTGGATGTTGCAAGATAGATCTGGCTCATGCTTTCAATGGGACTCAGGAAATGGAGTTGGAGGAGTCTTCCATGGTAGCCTCGAAGAAGGAAAAAAATTGTAAGAAAATTTCAAGTCCCGTTCAAGTTGTCAGCCACCAAGATGACATGCATTCCTGTATCGAAAGTGAAAAGCCCAAAACCCAAGACAAGTTGTCTCATGTAAATTGCGTCAGGATAAAGGATATTGGGAACAACATAAGCAGTTCTACGCCTCAATCATATAAGCAGAAAGATACCACTGTATATAAAAATACAAGTCCGGCTGAAGCTTCCAATGGGCCTCAGAAATTGTGCATGGATGACTCTTCCATGGTTCCCTTGCAGAATGTAGAAAGCTGTGAGAAAATTTCAAGCACCATTCAAGTTGTCAACCAGCAAAAAAAGATTACCTCCATTCGCTCTGAACTAAATGGCTCAGTAAGTAATACGAAGGTTGAGACTGTGAACCGGACAAGTCCATCCCTTACTGACAGGCTACAGATTAGTATAGCTTCAAAAGAACACATCTTGTCAGAAACTGCTTTGAAAGTTCTTATGAAAAAAAGGAATGAGCTGTCTATTAAGAAGCGCAATATAGAGGATGAGCTTGCTCGGTGTGAAAAAGATATCCAGACAATTATAAATGGTGGTGAAGATGGCTCAGTAGTAATCGTTGAGTCTCTTATAGAAGGTTGTAATGATGGATATCTAAGAAATGAAAGGACTCATACACTGCTAGATGAGGAATGCCCTCCTAAATCTGTCAAGAGGAAGAGGCTGTCAGAGGCTATCCTTGACAAGCAAAATCAATGCCAGGAATTGGATGGCATATGTTGCGAAAACAGCTGGGTGTTACCAACTTATTGTGTATCCCTATCAGATGGAGGATTCCAAGCTAATGTAACCGTAGAAGGTCTGGACTTCAAGTGTTCACGTGAGGGTGATCTGTGTTCCAGTCCTAGTGAAGCAAGAGAATCAGCTGCATTGCAAATGTTGGTAAAGTTGAGGAGCATGGCTGCCCAAGCCAAAAGGTTGCAGGTCAGGAATGTGAAAGGTACCAATGGTCAAATGGAATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DND1_DSRM

Protein Analysis

714

Amino Acids

79.19

Weight (kDa)

6.09

Isoelectric Point (pI)

47.39

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DUF7913	PF25500	7 - 125	3.2e-55	Domain of unknown function (DUF7913)
DUF7915	PF25502	190 - 282	4.1e-42	Domain of unknown function (DUF7915)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004671)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G05950 AT1G05950 AT1G05950 AT1G05950 AT1G05950
fragaria_vesca	FvH4_4g10700 FvH4_4g10700 FvH4_4g10700 FvH4_4g10700 FvH4_4g10700 FvH4_4g10700 FvH4_4g10700 FvH4_4g10700 FvH4_4g10700 FvH4_4g10700
malus_domestica	MD04G1007700.v1.1
prunus_persica	Prupe.1G191700_v2.0.a1 Prupe.1G191700_v2.0.a1 Prupe.1G191700_v2.0.a1
rosa_chinensis	RchiOBHm_Chr4g0407011
rosa_laevigata	RLG00000008744
rosa_multiflora	Rmu_sc0000600.1_g000013
rosa_roxburghii	Rroxscaffold_5G00351720
rosa_rugosa	Rorug04G0076500 Rorug04G0076600 Rorug04G0076700
rosa_samantha	Rh4AG142000 Rh4BG139200 Rh4CG148600 Rh4DG136200
rosa_wichuraiana	Rw4G011570

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1709
Acc36I	ACCTGC	1 cut(s)	2095
Acc65I	GGTACC	1 cut(s)	2123
AccB1I	GGYRCC	1 cut(s)	2123
AccB7I	CCANNNNNTGG	2 cut(s)	1029, 1888
AccBSI	CCGCTC	1 cut(s)	887
AccII	CGCG	1 cut(s)	768
AciI	CCGC	4 cut(s)	97, 766, 768, 887
AclWI	GGATC	2 cut(s)	246, 999
AcoI	YGGCCR	1 cut(s)	407
AcsI	RAATTY	8 cut(s)	269, 517, 760, 851, 942, 1012, 1155, 1434
AcuI	CTGAAG	1 cut(s)	1374
AcvI	CACGTG	1 cut(s)	2003
AfaI	GTAC	3 cut(s)	682, 797, 2125
AfiI	CCNNNNNNNGG	3 cut(s)	771, 1029, 1888
AhdI	GACNNNNNGTC	1 cut(s)	1240
AjnI	CCWGG	4 cut(s)	489, 738, 937, 1881
Alw21I	GWGCWC	1 cut(s)	391
Alw26I	GTCTC	4 cut(s)	969, 1248, 1520, 1752
AlwI	GGATC	2 cut(s)	246, 999
AlwNI	CAGNNNCTG	1 cut(s)	1607
AoxI	GGCC	2 cut(s)	407, 1367
ApeKI	GCWGC	4 cut(s)	653, 656, 2048, 2084
ApoI	RAATTY	8 cut(s)	269, 517, 760, 851, 942, 1012, 1155, 1434
Asp718I	GGTACC	1 cut(s)	2123
AspLEI	GCGC	1 cut(s)	1659
AspS9I	GGNCC	4 cut(s)	55, 743, 918, 1367
AsuHPI	GGTGA	4 cut(s)	299, 710, 1730, 2021
AsuNHI	GCTAGC	1 cut(s)	905
AvaII	GGWCC	3 cut(s)	55, 743, 918
BaeI	ACNNNNGTAYC	2 cut(s)	1314, 1347
BalI	TGGCCA	1 cut(s)	409
BanI	GGYRCC	1 cut(s)	2123
BbrPI	CACGTG	1 cut(s)	2003
BbsI	GAAGAC	2 cut(s)	552, 1107
Bbv12I	GWGCWC	1 cut(s)	391
BbvI	GCAGC	4 cut(s)	643, 665, 2035, 2071
BccI	CCATC	7 cut(s)	115, 399, 1555, 1718, 1763, 1886, 1943
BceAI	ACGGC	1 cut(s)	23
BciT130I	CCWGG	4 cut(s)	491, 740, 939, 1883
BciVI	GTATCC	2 cut(s)	94, 1948
BclI	TGATCA	1 cut(s)	304
BcoDI	GTCTC	4 cut(s)	969, 1248, 1520, 1752
BfaI	CTAG	5 cut(s)	197, 881, 906, 1805, 2028
BfmI	CTRYAG	2 cut(s)	582, 1565
BfuAI	ACCTGC	1 cut(s)	2095
BfuI	GTATCC	2 cut(s)	94, 1948
BglI	GCCNNNNNGGC	2 cut(s)	44, 257
BglII	AGATCT	1 cut(s)	1066
BisI	GCNGC	5 cut(s)	654, 657, 769, 2049, 2085
BlsI	GCNGC	5 cut(s)	655, 658, 770, 2050, 2086
BmcAI	AGTACT	1 cut(s)	797
Bme1390I	CCNGG	4 cut(s)	491, 740, 939, 1883
Bme18I	GGWCC	3 cut(s)	55, 743, 918
BmeRI	GACNNNNNGTC	1 cut(s)	1240
BmgT120I	GGNCC	4 cut(s)	55, 743, 918, 1367
BmiI	GGNNCC	3 cut(s)	744, 1404, 2125
BmrFI	CCNGG	4 cut(s)	491, 740, 939, 1883
BmsI	GCATC	3 cut(s)	25, 364, 386
BmtI	GCTAGC	1 cut(s)	909
BpiI	GAAGAC	2 cut(s)	552, 1107
BpmI	CTGGAG	1 cut(s)	722
BsaAI	YACGTR	1 cut(s)	2003
BsaBI	GATNNNNATC	1 cut(s)	1773
BsaJI	CCNNGG	8 cut(s)	30, 381, 489, 490, 739, 766, 1119, 1398
BsaWI	WCCGGW	1 cut(s)	1536
Bsc4I	CCNNNNNNNGG	3 cut(s)	771, 1029, 1888
Bse1I	ACTGG	2 cut(s)	839, 2022
Bse3DI	GCAATG	2 cut(s)	191, 2051
Bse8I	GATNNNNATC	1 cut(s)	1773
BseBI	CCWGG	4 cut(s)	491, 740, 939, 1883
BseDI	CCNNGG	8 cut(s)	30, 381, 489, 490, 739, 766, 1119, 1398
BseGI	GGATG	8 cut(s)	40, 377, 410, 1058, 1393, 1547, 1675, 1897
BseJI	GATNNNNATC	1 cut(s)	1773
BseLI	CCNNNNNNNGG	3 cut(s)	771, 1029, 1888
BseMI	GCAATG	2 cut(s)	191, 2051
BseMII	CTCAG	7 cut(s)	390, 567, 810, 1106, 1385, 1518, 1743
BseNI	ACTGG	2 cut(s)	839, 2022
BseRI	GAGGAG	2 cut(s)	1124, 2089
BseXI	GCAGC	4 cut(s)	643, 665, 2035, 2071
BseYI	CCCAGC	1 cut(s)	1914
Bsh1236I	CGCG	1 cut(s)	768
BshFI	GGCC	2 cut(s)	409, 1369
BshNI	GGYRCC	1 cut(s)	2123
BsiHKAI	GWGCWC	1 cut(s)	391
BsiSI	CCGG	2 cut(s)	1349, 1537
BslFI	GGGAC	2 cut(s)	1102, 1149
BslI	CCNNNNNNNGG	3 cut(s)	771, 1029, 1888
BsmAI	GTCTC	4 cut(s)	969, 1248, 1520, 1752
BsmFI	GGGAC	2 cut(s)	1102, 1149
BsmI	GAATGC	2 cut(s)	1198, 1820
BsnI	GGCC	2 cut(s)	409, 1369
Bsp1286I	GDGCHC	1 cut(s)	391
Bsp143I	GATC	7 cut(s)	238, 304, 532, 601, 991, 1066, 2011
Bsp19I	CCATGG	3 cut(s)	381, 1119, 1398
BspACI	CCGC	4 cut(s)	97, 766, 768, 887
BspANI	GGCC	2 cut(s)	409, 1369
BspCNI	CTCAG	7 cut(s)	391, 568, 811, 1105, 1384, 1517, 1742
BspFNI	CGCG	1 cut(s)	768
BspLI	GGNNCC	3 cut(s)	744, 1404, 2125
BspMI	ACCTGC	1 cut(s)	2095
BspOI	GCTAGC	1 cut(s)	909
BspPI	GGATC	2 cut(s)	246, 999
BspT107I	GGYRCC	1 cut(s)	2123
BsrBI	CCGCTC	1 cut(s)	887
BsrDI	GCAATG	2 cut(s)	191, 2051
BsrI	ACTGG	2 cut(s)	839, 2022
BssECI	CCNNGG	8 cut(s)	30, 381, 489, 490, 739, 766, 1119, 1398
BssMI	GATC	7 cut(s)	238, 304, 532, 601, 991, 1066, 2011
BssT1I	CCWWGG	3 cut(s)	381, 1119, 1398
Bst2UI	CCWGG	4 cut(s)	491, 740, 939, 1883
Bst4CI	ACNGT	8 cut(s)	126, 427, 539, 778, 787, 1330, 1531, 1975
Bst6I	CTCTTC	2 cut(s)	1399, 1835
BstAPI	GCANNNNNTGC	1 cut(s)	1902
BstBAI	YACGTR	1 cut(s)	2003
BstC8I	GCNNGC	4 cut(s)	147, 258, 907, 1677
BstDEI	CTNAG	8 cut(s)	399, 576, 819, 1092, 1371, 1504, 1729, 1778
BstDSI	CCRYGG	4 cut(s)	381, 766, 1119, 1398
BstF5I	GGATG	8 cut(s)	40, 377, 410, 1058, 1393, 1547, 1675, 1897
BstFNI	CGCG	1 cut(s)	768
BstHHI	GCGC	1 cut(s)	1659
BstKTI	GATC	7 cut(s)	241, 307, 535, 604, 994, 1069, 2014
BstMAI	GTCTC	4 cut(s)	969, 1248, 1520, 1752
BstMBI	GATC	7 cut(s)	238, 304, 532, 601, 991, 1066, 2011
BstMWI	GCNNNNNNNGC	5 cut(s)	44, 257, 1902, 1911, 2090
BstNI	CCWGG	4 cut(s)	491, 740, 939, 1883
BstNSI	RCATGY	3 cut(s)	149, 354, 1198
BstSCI	CCNGG	4 cut(s)	489, 738, 937, 1881
BstSFI	CTRYAG	2 cut(s)	582, 1565
BstUI	CGCG	1 cut(s)	768
BstV1I	GCAGC	4 cut(s)	643, 665, 2035, 2071
BstV2I	GAAGAC	2 cut(s)	552, 1107
BstX2I	RGATCY	3 cut(s)	238, 991, 1066
BstYI	RGATCY	3 cut(s)	238, 991, 1066
BsuI	GTATCC	2 cut(s)	94, 1948
BsuRI	GGCC	2 cut(s)	409, 1369
BtgI	CCRYGG	4 cut(s)	381, 766, 1119, 1398
BtsCI	GGATG	8 cut(s)	40, 377, 410, 1058, 1393, 1547, 1675, 1897
BtsI	GCAGTG	2 cut(s)	1054, 1799
BtsIMutI	CAGTG	6 cut(s)	396, 510, 683, 1054, 1326, 1799
BveI	ACCTGC	1 cut(s)	2095
Cac8I	GCNNGC	4 cut(s)	147, 258, 907, 1677
CaiI	CAGNNNCTG	1 cut(s)	1607
CfoI	GCGC	1 cut(s)	1659
Cfr13I	GGNCC	4 cut(s)	55, 743, 918, 1367
Cfr42I	CCGCGG	1 cut(s)	769
CseI	GACGC	1 cut(s)	1246
Csp6I	GTAC	3 cut(s)	681, 796, 2124
CviQI	GTAC	3 cut(s)	681, 796, 2124
DdeI	CTNAG	8 cut(s)	399, 576, 819, 1092, 1371, 1504, 1729, 1778
DpnI	GATC	7 cut(s)	240, 306, 534, 603, 993, 1068, 2013
DpnII	GATC	7 cut(s)	238, 304, 532, 601, 991, 1066, 2011
DriI	GACNNNNNGTC	1 cut(s)	1240
EaeI	YGGCCR	1 cut(s)	407
Eam1104I	CTCTTC	2 cut(s)	1399, 1835
Eam1105I	GACNNNNNGTC	1 cut(s)	1240
EarI	CTCTTC	2 cut(s)	1399, 1835
Eco130I	CCWWGG	3 cut(s)	381, 1119, 1398
Eco32I	GATATC	2 cut(s)	1696, 1775
Eco47I	GGWCC	3 cut(s)	55, 743, 918
Eco57I	CTGAAG	1 cut(s)	1374
Eco72I	CACGTG	1 cut(s)	2003
EcoO109I	RGGNCCY	1 cut(s)	743
EcoRI	GAATTC	2 cut(s)	760, 851
EcoRII	CCWGG	4 cut(s)	489, 738, 937, 1881
EcoRV	GATATC	2 cut(s)	1696, 1775
EcoT14I	CCWWGG	3 cut(s)	381, 1119, 1398
EcoT22I	ATGCAT	2 cut(s)	379, 1200
ErhI	CCWWGG	3 cut(s)	381, 1119, 1398
FaqI	GGGAC	2 cut(s)	1102, 1149
FauI	CCCGC	3 cut(s)	90, 773, 880
FauNDI	CATATG	3 cut(s)	264, 859, 1898
FbaI	TGATCA	1 cut(s)	304
Fnu4HI	GCNGC	5 cut(s)	654, 657, 769, 2049, 2085
FokI	GGATG	8 cut(s)	47, 364, 417, 1065, 1400, 1534, 1682, 1904
Fsp4HI	GCNGC	5 cut(s)	654, 657, 769, 2049, 2085
FspBI	CTAG	5 cut(s)	197, 881, 906, 1805, 2028
GlaI	GCGC	1 cut(s)	1658
GluI	GCNGC	5 cut(s)	654, 657, 769, 2049, 2085
GsaI	CCCAGC	1 cut(s)	1918
GsuI	CTGGAG	1 cut(s)	722
HaeIII	GGCC	2 cut(s)	409, 1369
HapII	CCGG	2 cut(s)	1349, 1537
HgaI	GACGC	1 cut(s)	1246
HhaI	GCGC	1 cut(s)	1659
Hin6I	GCGC	1 cut(s)	1657
HinP1I	GCGC	1 cut(s)	1657
HincII	GTYRAC	3 cut(s)	67, 439, 1459
HindII	GTYRAC	3 cut(s)	67, 439, 1459
HindIII	AAGCTT	1 cut(s)	1356
HinfI	GANTC	9 cut(s)	440, 872, 1090, 1112, 1391, 1745, 1792, 1956, 2042
HpaII	CCGG	2 cut(s)	1349, 1537
HphI	GGTGA	4 cut(s)	299, 710, 1730, 2021
Hpy166II	GTNNAC	6 cut(s)	67, 439, 681, 1459, 1534, 2000
Hpy188III	TCNNGA	8 cut(s)	308, 956, 1094, 1261, 1699, 1834, 1985, 2110
Hpy8I	GTNNAC	6 cut(s)	67, 439, 681, 1459, 1534, 2000
HpyAV	CCTTC	6 cut(s)	442, 939, 1129, 1513, 1751, 1973
HpyCH4III	ACNGT	8 cut(s)	126, 427, 539, 778, 787, 1330, 1531, 1975
HpyCH4IV	ACGT	1 cut(s)	2002
HpyF10VI	GCNNNNNNNGC	5 cut(s)	44, 257, 1902, 1911, 2090
HpyF3I	CTNAG	8 cut(s)	399, 576, 819, 1092, 1371, 1504, 1729, 1778
HpySE526I	ACGT	1 cut(s)	2002
HspAI	GCGC	1 cut(s)	1657
KpnI	GGTACC	1 cut(s)	2127
Ksp22I	TGATCA	1 cut(s)	304
KspI	CCGCGG	1 cut(s)	769
Kzo9I	GATC	7 cut(s)	238, 304, 532, 601, 991, 1066, 2011
LmnI	GCTCC	4 cut(s)	394, 884, 1033, 2076
Lsp1109I	GCAGC	4 cut(s)	643, 665, 2035, 2071
LweI	GCATC	3 cut(s)	25, 364, 386
MaeI	CTAG	5 cut(s)	197, 881, 906, 1805, 2028
MaeII	ACGT	1 cut(s)	2002
MaeIII	GTNAC	6 cut(s)	325, 421, 751, 778, 1920, 1969
MalI	GATC	7 cut(s)	240, 306, 534, 603, 993, 1068, 2013
MbiI	CCGCTC	1 cut(s)	887
MboI	GATC	7 cut(s)	238, 304, 532, 601, 991, 1066, 2011
MboII	GAAGA	8 cut(s)	81, 557, 596, 1107, 1144, 1386, 1733, 1852
MflI	RGATCY	3 cut(s)	238, 991, 1066
MhlI	GDGCHC	1 cut(s)	391
MlsI	TGGCCA	1 cut(s)	409
MluNI	TGGCCA	1 cut(s)	409
MlyI	GAGTC	6 cut(s)	434, 1084, 1121, 1385, 1754, 1786
MmeI	TCCRAC	3 cut(s)	50, 855, 1086
Mox20I	TGGCCA	1 cut(s)	409
Mph1103I	ATGCAT	2 cut(s)	379, 1200
MscI	TGGCCA	1 cut(s)	409
MseI	TTAA	5 cut(s)	213, 243, 561, 717, 1650
MslI	CAYNNNNRTG	1 cut(s)	1188
Msp20I	TGGCCA	1 cut(s)	409
MspA1I	CMGCKG	4 cut(s)	656, 768, 1914, 2048
MspI	CCGG	2 cut(s)	1349, 1537
MspR9I	CCNGG	4 cut(s)	491, 740, 939, 1883
Mva1269I	GAATGC	2 cut(s)	1198, 1820
MvaI	CCWGG	4 cut(s)	491, 740, 939, 1883
MvnI	CGCG	1 cut(s)	768
MwoI	GCNNNNNNNGC	5 cut(s)	44, 257, 1902, 1911, 2090
NcoI	CCATGG	3 cut(s)	381, 1119, 1398
NdeI	CATATG	3 cut(s)	264, 859, 1898
NdeII	GATC	7 cut(s)	238, 304, 532, 601, 991, 1066, 2011
NheI	GCTAGC	1 cut(s)	905
NlaIV	GGNNCC	3 cut(s)	744, 1404, 2125
NmuCI	GTSAC	1 cut(s)	751
NsiI	ATGCAT	2 cut(s)	379, 1200
NspI	RCATGY	3 cut(s)	149, 354, 1198
PaeI	GCATGC	1 cut(s)	149
PasI	CCCWGGG	1 cut(s)	490
PctI	GAATGC	2 cut(s)	1198, 1820
PfeI	GAWTC	3 cut(s)	872, 1956, 2042
PflMI	CCANNNNNTGG	2 cut(s)	1029, 1888
PkrI	GCNGC	5 cut(s)	655, 658, 770, 2050, 2086
PleI	GAGTC	6 cut(s)	434, 1084, 1120, 1385, 1753, 1786
PmaCI	CACGTG	1 cut(s)	2003
PmlI	CACGTG	1 cut(s)	2003
PpsI	GAGTC	6 cut(s)	434, 1084, 1120, 1385, 1753, 1786
Ppu21I	YACGTR	1 cut(s)	2003
PpuMI	RGGWCCY	1 cut(s)	743
PsiI	TTATAA	1 cut(s)	1709
Psp5II	RGGWCCY	1 cut(s)	743
Psp6I	CCWGG	4 cut(s)	489, 738, 937, 1881
PspCI	CACGTG	1 cut(s)	2003
PspFI	CCCAGC	1 cut(s)	1914
PspGI	CCWGG	4 cut(s)	489, 738, 937, 1881
PspN4I	GGNNCC	3 cut(s)	744, 1404, 2125
PspPI	GGNCC	4 cut(s)	55, 743, 918, 1367
PspPPI	RGGWCCY	1 cut(s)	743
PstNI	CAGNNNCTG	1 cut(s)	1607
PsuI	RGATCY	3 cut(s)	238, 991, 1066
PvuII	CAGCTG	3 cut(s)	656, 1914, 2048
RsaI	GTAC	3 cut(s)	682, 797, 2125
RsaNI	GTAC	3 cut(s)	681, 796, 2124
RseI	CAYNNNNRTG	1 cut(s)	1188
SacII	CCGCGG	1 cut(s)	769
SaqAI	TTAA	5 cut(s)	213, 243, 561, 717, 1650
SatI	GCNGC	5 cut(s)	654, 657, 769, 2049, 2085
Sau3AI	GATC	7 cut(s)	238, 304, 532, 601, 991, 1066, 2011
Sau96I	GGNCC	4 cut(s)	55, 743, 918, 1367
ScaI	AGTACT	1 cut(s)	797
SchI	GAGTC	6 cut(s)	434, 1084, 1121, 1385, 1754, 1786
ScrFI	CCNGG	4 cut(s)	491, 740, 939, 1883
SduI	GDGCHC	1 cut(s)	391
SfaNI	GCATC	3 cut(s)	25, 364, 386
SfcI	CTRYAG	2 cut(s)	582, 1565
Sfr303I	CCGCGG	1 cut(s)	769
SgrBI	CCGCGG	1 cut(s)	769
SinI	GGWCC	3 cut(s)	55, 743, 918
SmiMI	CAYNNNNRTG	1 cut(s)	1188
SphI	GCATGC	1 cut(s)	149
SsiI	CCGC	4 cut(s)	97, 766, 768, 887
SspMI	CTAG	5 cut(s)	197, 881, 906, 1805, 2028
StyD4I	CCNGG	4 cut(s)	489, 738, 937, 1881
StyI	CCWWGG	3 cut(s)	381, 1119, 1398
TaaI	ACNGT	8 cut(s)	126, 427, 539, 778, 787, 1330, 1531, 1975
TaiI	ACGT	1 cut(s)	2005
TaqI	TCGA	2 cut(s)	1130, 1209
TaqII	GACCGA	1 cut(s)	935
TatI	WGTACW	1 cut(s)	795
TauI	GCSGC	1 cut(s)	771
TfiI	GAWTC	3 cut(s)	872, 1956, 2042
Tru1I	TTAA	5 cut(s)	213, 243, 561, 717, 1650
Tru9I	TTAA	5 cut(s)	213, 243, 561, 717, 1650
TscAI	CASTG	6 cut(s)	403, 510, 683, 1054, 1333, 1806
TseFI	GTSAC	1 cut(s)	751
TseI	GCWGC	4 cut(s)	653, 656, 2048, 2084
Tsp45I	GTSAC	1 cut(s)	751
TspDTI	ATGAA	5 cut(s)	281, 290, 830, 1640, 1800
TspRI	CASTG	6 cut(s)	403, 510, 683, 1054, 1333, 1806
Van91I	CCANNNNNTGG	2 cut(s)	1029, 1888
VpaK11BI	GGWCC	3 cut(s)	55, 743, 918
XapI	RAATTY	8 cut(s)	269, 517, 760, 851, 942, 1012, 1155, 1434
XceI	RCATGY	3 cut(s)	149, 354, 1198
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1889, 2134
XspI	CTAG	5 cut(s)	197, 881, 906, 1805, 2028
ZrmI	AGTACT	1 cut(s)	797
Zsp2I	ATGCAT	2 cut(s)	379, 1200

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.