Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr2

Orthogroup ID

OG0004671

Physical Location & Seq

Genomic Coordinates Forward (+)

36161963 .. 36172239

Gene Structure 10277 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000008744

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2214 bp

ATGGATGCTTCGGATATATGTCCAACCGAGGATGCCGTTCAGGCTTTTTTGGACCACTTGGTTGACCCAATACTTCCAGCAAAATCTTCTCTGCGGGATACCCCATCTCTCTCTCAACAACAGTCAGTTGCAAAACAGGTGCATGCTGTTGTGCTACTATACAATTACTACCACAGAAAGCAATGTCCAAAGCTAGAGGTTTTGTGTTTTAATTCGTTTTGCAAGTTGGTTTTGGATCTGAAACCAGCCTTGCTGGCTCATATGAAATTTATGAAAAGGTCAGGAGATACTGAATTGGTTGATCAGGAGAAACAACTTTCAGTTACCGAAAGAACAATAATGGAAGCATGTCAAATATCTACAAGTTTAGATGCATCCATGGGTGCTCCAAACACTGAGGGATGGCCAATTACCAAAGTTACAGTTCTTTTAGTTGACTCCAAGAAGGAGAACTGCTATTTGCAATTCAGTTCCAATTCCATGACCCAGGGGGTTTGGTCAGTGATTGATAAAAATTTGGAGGTCAGAGATCACAGTTCAGAAGACACAAGGGGGTTAAAACATGTAAACAAAAACAAAAGAGTCACTGGAAAACCTTCAAGAGGAGAACCAAGGATTGATGAAACTAGTTGTCAAAAACTGGCATATTCAGCAATTACTGAGGCTACAGGTATTAGTCAAAATGATCTTCTTGTTTTGGAAAGCCATGTTGTATTTTCGGATAGTAAAGAAAAGGCAGCTGCTTGTTTTTTTATAGTTCAGTGTACCCAATCAGGCAAGGGTGATATTCAGCTTCCTATTAAAGATGTTATTGACAGCCTCCAGGGTCCTCTGGTCACAAAGAATTCCCGCGGCTGGACAGTTACAACAGTTGTTGAGTACTTCCATGTACTTCCTTATGCTGAGATTTTGTCCGACTGGTTTCATAGGAGAGAATTCTCAAATGGTTTGAAAGATTCAAGGCTAGGAGCAGGAAATGTAAATGTGGCTAGCCCTAAAAGGACCGAAACACCTTCCAAACCAGGAATTTGCAAAAATCAAGAGAAGTCTCATGTAATTGATGTTGTGATAGAGGATCTTGGAAGCAACACAAAAAATTCTGAACCCAAATCATGGAAGCAAAAAGATAGCAGTGGATGTTGCAAGATAGATCTGGCTTATGCTTTCAATGGGTCTCAGGAAATGGAGTTGGAGGAGTCTTCCATGGTTGCCTCGAAGAAGGAAAAAATTTGTAAGAAAATTTCAAGTCCCGTTCAAGTTGTCAGCCACCAAGATGACATGCATTCCTGTATCGAAACTGAAAAGCCCAAAACCCAAGACAAGTTGTCTCATGTAAATTGCGTCAGGATAAAGGATATTGGGAACAGCATAAGCAGTTCTACGACTCGATCATATAAGCAGAAAGATACCACTGTATATAAAAATACAAGTCCAGCTGAAGCTTCCAATGGGCCTCAGAAATTGTGCATGGATGACTCTTCCATGGTTCCTTTGCAGAATGTAGAAAGCTGTGAGAAAATTTCAAGCACCATTCAAGTTGTCAACCAGCAAAAAAAGATTTCCTCGATTCGCTCTGAACTAAATGGCTCAGTTGAGACTGTGAAACGGATAAGTCCATCCCTTACTGACAAGCTACAGATTAGTATAGCTTCAAAAGAACACATCTTGTCAGAAACTGCTTTGAAAGTTCTTATGAAAAAAAGGAATGAGCTGTCTATTAAGAAGCGCAATATAGAGGATGAGCTTGCTCGTTGTGAAAAAGATATCCAGACAATTATAAATGGTGGTGAAGATGGCTCAGCAGTAATAGTTGAGTCTCTTATAGAAGGTTGTAATGATGGATATCTAAGAAATGAAAGGACTCATACACTGCTAGAACAGGAATGCTCTTCTAAATCTGTCAAGAGGAAGAGGCTGTCAGAGGCTATCCTTGAAAAGCAAAATCAATGCCAGGAATTGGATGGCATATGTTGTGAAAACAGCTGGGTATTACCAACTTATTGTGTATCCCTCTCAGATGGAGGATTCCAAGCTAATGTAACCGTAGAAGGTCTGGACTTCAAGTGTTCACGTGAGGGTGATCTGTGTTCCAGTCCTAGTGAAGCAAGAGAATCAGCTGCATTGCAAATGTTGGTAAAGTTGCGGAGCATGGCTGGCCAAGCCAAAAGGTTGCAGGTCAGGAATGTGAAAGGTACCAATGGTCAAATGGAATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DND1_DSRM

Protein Analysis

738

Amino Acids

81.77

Weight (kDa)

6.93

Isoelectric Point (pI)

47.86

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DUF7913	PF25500	6 - 124	2e-55	Domain of unknown function (DUF7913)
DUF7915	PF25502	162 - 310	3.9e-63	Domain of unknown function (DUF7915)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004671)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G05950 AT1G05950 AT1G05950 AT1G05950 AT1G05950
fragaria_vesca	FvH4_4g10700 FvH4_4g10700 FvH4_4g10700 FvH4_4g10700 FvH4_4g10700 FvH4_4g10700 FvH4_4g10700 FvH4_4g10700 FvH4_4g10700 FvH4_4g10700
malus_domestica	MD04G1007700.v1.1
prunus_persica	Prupe.1G191700_v2.0.a1 Prupe.1G191700_v2.0.a1 Prupe.1G191700_v2.0.a1
rosa_chinensis	RchiOBHm_Chr4g0407011
rosa_laevigata	RLG00000008744
rosa_multiflora	Rmu_sc0000600.1_g000013
rosa_roxburghii	Rroxscaffold_5G00351720
rosa_rugosa	Rorug04G0076500 Rorug04G0076600 Rorug04G0076700
rosa_samantha	Rh4AG142000 Rh4BG139200 Rh4CG148600 Rh4DG136200
rosa_wichuraiana	Rw4G011570

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1778
Acc36I	ACCTGC	1 cut(s)	2164
Acc65I	GGTACC	1 cut(s)	2192
AccB1I	GGYRCC	1 cut(s)	2192
AccB7I	CCANNNNNTGG	2 cut(s)	1113, 1957
AccII	CGCG	1 cut(s)	852
AciI	CCGC	4 cut(s)	94, 850, 852, 2143
AclWI	GGATC	2 cut(s)	243, 1083
AcoI	YGGCCR	2 cut(s)	404, 2155
AcsI	RAATTY	9 cut(s)	266, 514, 844, 935, 1026, 1096, 1227, 1239, 1518
AcuI	CTGAAG	1 cut(s)	1458
AcvI	CACGTG	1 cut(s)	2072
AfaI	GTAC	4 cut(s)	766, 881, 891, 2194
AfiI	CCNNNNNNNGG	4 cut(s)	602, 855, 1113, 1957
AflIII	ACRYGT	1 cut(s)	562
AhdI	GACNNNNNGTC	1 cut(s)	1324
AhlI	ACTAGT	1 cut(s)	626
AjnI	CCWGG	4 cut(s)	486, 822, 1021, 1950
Alw21I	GWGCWC	1 cut(s)	388
Alw26I	GTCTC	5 cut(s)	1053, 1179, 1332, 1589, 1821
AlwI	GGATC	2 cut(s)	243, 1083
AlwNI	CAGNNNCTG	1 cut(s)	1676
AoxI	GGCC	3 cut(s)	404, 1451, 2155
ApeKI	GCWGC	3 cut(s)	737, 740, 2117
ApoI	RAATTY	9 cut(s)	266, 514, 844, 935, 1026, 1096, 1227, 1239, 1518
Asp700I	GAANNNNTTC	1 cut(s)	595
Asp718I	GGTACC	1 cut(s)	2192
AspLEI	GCGC	1 cut(s)	1728
AspS9I	GGNCC	4 cut(s)	52, 827, 1002, 1451
AsuHPI	GGTGA	3 cut(s)	794, 1799, 2090
AsuNHI	GCTAGC	1 cut(s)	989
AvaII	GGWCC	3 cut(s)	52, 827, 1002
BaeI	ACNNNNGTAYC	2 cut(s)	1398, 1431
BalI	TGGCCA	2 cut(s)	406, 2157
BanI	GGYRCC	1 cut(s)	2192
BbrPI	CACGTG	1 cut(s)	2072
BbsI	GAAGAC	2 cut(s)	549, 1191
Bbv12I	GWGCWC	1 cut(s)	388
BbvI	GCAGC	3 cut(s)	727, 749, 2104
BccI	CCATC	7 cut(s)	112, 396, 1624, 1787, 1832, 1955, 2012
BceAI	ACGGC	1 cut(s)	20
BciT130I	CCWGG	4 cut(s)	488, 824, 1023, 1952
BciVI	GTATCC	2 cut(s)	91, 2017
BclI	TGATCA	1 cut(s)	301
BcoDI	GTCTC	5 cut(s)	1053, 1179, 1332, 1589, 1821
BcuI	ACTAGT	1 cut(s)	626
BfaI	CTAG	6 cut(s)	194, 627, 965, 990, 1874, 2097
BfmI	CTRYAG	2 cut(s)	666, 1634
BfuAI	ACCTGC	1 cut(s)	2164
BfuI	GTATCC	2 cut(s)	91, 2017
BglI	GCCNNNNNGGC	2 cut(s)	41, 254
BglII	AGATCT	1 cut(s)	1150
BisI	GCNGC	4 cut(s)	738, 741, 853, 2118
BlpI	GCTNAGC	1 cut(s)	1798
BlsI	GCNGC	4 cut(s)	739, 742, 854, 2119
BmcAI	AGTACT	1 cut(s)	881
Bme1390I	CCNGG	4 cut(s)	488, 824, 1023, 1952
Bme18I	GGWCC	3 cut(s)	52, 827, 1002
BmeRI	GACNNNNNGTC	1 cut(s)	1324
BmgT120I	GGNCC	4 cut(s)	52, 827, 1002, 1451
BmiI	GGNNCC	3 cut(s)	828, 1488, 2194
BmrFI	CCNGG	4 cut(s)	488, 824, 1023, 1952
BmsI	GCATC	3 cut(s)	22, 361, 383
BmtI	GCTAGC	1 cut(s)	993
BpiI	GAAGAC	2 cut(s)	549, 1191
BpmI	CTGGAG	1 cut(s)	806
Bpu1102I	GCTNAGC	1 cut(s)	1798
BsaAI	YACGTR	1 cut(s)	2072
BsaBI	GATNNNNATC	1 cut(s)	1842
BsaI	GGTCTC	1 cut(s)	1179
BsaJI	CCNNGG	9 cut(s)	27, 378, 486, 487, 611, 823, 850, 1203, 1482
Bsc4I	CCNNNNNNNGG	4 cut(s)	602, 855, 1113, 1957
Bse1I	ACTGG	4 cut(s)	592, 645, 923, 2091
Bse3DI	GCAATG	2 cut(s)	188, 2120
Bse8I	GATNNNNATC	1 cut(s)	1842
BseBI	CCWGG	4 cut(s)	488, 824, 1023, 1952
BseDI	CCNNGG	9 cut(s)	27, 378, 486, 487, 611, 823, 850, 1203, 1482
BseGI	GGATG	9 cut(s)	10, 37, 374, 407, 1142, 1477, 1616, 1744, 1966
BseJI	GATNNNNATC	1 cut(s)	1842
BseLI	CCNNNNNNNGG	4 cut(s)	602, 855, 1113, 1957
BseMI	GCAATG	2 cut(s)	188, 2120
BseMII	CTCAG	8 cut(s)	387, 651, 894, 1190, 1469, 1602, 1812, 2028
BseNI	ACTGG	4 cut(s)	592, 645, 923, 2091
BseRI	GAGGAG	2 cut(s)	618, 1208
BseXI	GCAGC	3 cut(s)	727, 749, 2104
BseYI	CCCAGC	1 cut(s)	1983
Bsh1236I	CGCG	1 cut(s)	852
BshFI	GGCC	3 cut(s)	406, 1453, 2157
BshNI	GGYRCC	1 cut(s)	2192
BsiHKAI	GWGCWC	1 cut(s)	388
BslFI	GGGAC	1 cut(s)	1233
BslI	CCNNNNNNNGG	4 cut(s)	602, 855, 1113, 1957
BsmAI	GTCTC	5 cut(s)	1053, 1179, 1332, 1589, 1821
BsmFI	GGGAC	1 cut(s)	1233
BsmI	GAATGC	2 cut(s)	1282, 1889
BsnI	GGCC	3 cut(s)	406, 1453, 2157
Bso31I	GGTCTC	1 cut(s)	1179
Bsp1286I	GDGCHC	1 cut(s)	388
Bsp143I	GATC	8 cut(s)	235, 301, 529, 685, 1075, 1150, 1388, 2080
Bsp1720I	GCTNAGC	1 cut(s)	1798
Bsp19I	CCATGG	3 cut(s)	378, 1203, 1482
BspACI	CCGC	4 cut(s)	94, 850, 852, 2143
BspANI	GGCC	3 cut(s)	406, 1453, 2157
BspCNI	CTCAG	8 cut(s)	388, 652, 895, 1189, 1468, 1601, 1811, 2027
BspFNI	CGCG	1 cut(s)	852
BspLI	GGNNCC	3 cut(s)	828, 1488, 2194
BspMI	ACCTGC	1 cut(s)	2164
BspOI	GCTAGC	1 cut(s)	993
BspPI	GGATC	2 cut(s)	243, 1083
BspQI	GCTCTTC	1 cut(s)	1894
BspT107I	GGYRCC	1 cut(s)	2192
BspTNI	GGTCTC	1 cut(s)	1179
BsrDI	GCAATG	2 cut(s)	188, 2120
BsrI	ACTGG	4 cut(s)	592, 645, 923, 2091
BssECI	CCNNGG	9 cut(s)	27, 378, 486, 487, 611, 823, 850, 1203, 1482
BssMI	GATC	8 cut(s)	235, 301, 529, 685, 1075, 1150, 1388, 2080
BssT1I	CCWWGG	4 cut(s)	378, 611, 1203, 1482
Bst2UI	CCWGG	4 cut(s)	488, 824, 1023, 1952
Bst4CI	ACNGT	8 cut(s)	123, 424, 536, 862, 871, 1414, 1600, 2044
Bst6I	CTCTTC	3 cut(s)	1483, 1894, 1904
BstBAI	YACGTR	1 cut(s)	2072
BstC8I	GCNNGC	5 cut(s)	144, 255, 991, 1746, 2155
BstDEI	CTNAG	9 cut(s)	396, 660, 903, 1176, 1455, 1588, 1798, 1847, 2014
BstDSI	CCRYGG	4 cut(s)	378, 850, 1203, 1482
BstENI	CCTNNNNNAGG	1 cut(s)	600
BstF5I	GGATG	9 cut(s)	10, 37, 374, 407, 1142, 1477, 1616, 1744, 1966
BstFNI	CGCG	1 cut(s)	852
BstHHI	GCGC	1 cut(s)	1728
BstKTI	GATC	8 cut(s)	238, 304, 532, 688, 1078, 1153, 1391, 2083
BstMAI	GTCTC	5 cut(s)	1053, 1179, 1332, 1589, 1821
BstMBI	GATC	8 cut(s)	235, 301, 529, 685, 1075, 1150, 1388, 2080
BstMWI	GCNNNNNNNGC	5 cut(s)	41, 254, 650, 2154, 2159
BstNI	CCWGG	4 cut(s)	488, 824, 1023, 1952
BstNSI	RCATGY	4 cut(s)	146, 351, 566, 1282
BstSCI	CCNGG	4 cut(s)	486, 822, 1021, 1950
BstSFI	CTRYAG	2 cut(s)	666, 1634
BstUI	CGCG	1 cut(s)	852
BstV1I	GCAGC	3 cut(s)	727, 749, 2104
BstV2I	GAAGAC	2 cut(s)	549, 1191
BstX2I	RGATCY	3 cut(s)	235, 1075, 1150
BstYI	RGATCY	3 cut(s)	235, 1075, 1150
BsuI	GTATCC	2 cut(s)	91, 2017
BsuRI	GGCC	3 cut(s)	406, 1453, 2157
BtgI	CCRYGG	4 cut(s)	378, 850, 1203, 1482
BtsCI	GGATG	9 cut(s)	10, 37, 374, 407, 1142, 1477, 1616, 1744, 1966
BtsI	GCAGTG	2 cut(s)	1138, 1868
BtsIMutI	CAGTG	7 cut(s)	393, 507, 585, 767, 1138, 1410, 1868
BveI	ACCTGC	1 cut(s)	2164
Cac8I	GCNNGC	5 cut(s)	144, 255, 991, 1746, 2155
CaiI	CAGNNNCTG	1 cut(s)	1676
CfoI	GCGC	1 cut(s)	1728
Cfr13I	GGNCC	4 cut(s)	52, 827, 1002, 1451
Cfr42I	CCGCGG	1 cut(s)	853
CseI	GACGC	1 cut(s)	1330
Csp6I	GTAC	4 cut(s)	765, 880, 890, 2193
CviQI	GTAC	4 cut(s)	765, 880, 890, 2193
DdeI	CTNAG	9 cut(s)	396, 660, 903, 1176, 1455, 1588, 1798, 1847, 2014
DpnI	GATC	8 cut(s)	237, 303, 531, 687, 1077, 1152, 1390, 2082
DpnII	GATC	8 cut(s)	235, 301, 529, 685, 1075, 1150, 1388, 2080
DriI	GACNNNNNGTC	1 cut(s)	1324
EaeI	YGGCCR	2 cut(s)	404, 2155
Eam1104I	CTCTTC	3 cut(s)	1483, 1894, 1904
Eam1105I	GACNNNNNGTC	1 cut(s)	1324
EarI	CTCTTC	3 cut(s)	1483, 1894, 1904
Eco130I	CCWWGG	4 cut(s)	378, 611, 1203, 1482
Eco31I	GGTCTC	1 cut(s)	1179
Eco32I	GATATC	2 cut(s)	1765, 1844
Eco47I	GGWCC	3 cut(s)	52, 827, 1002
Eco57I	CTGAAG	1 cut(s)	1458
Eco72I	CACGTG	1 cut(s)	2072
EcoNI	CCTNNNNNAGG	1 cut(s)	600
EcoO109I	RGGNCCY	1 cut(s)	827
EcoRI	GAATTC	2 cut(s)	844, 935
EcoRII	CCWGG	4 cut(s)	486, 822, 1021, 1950
EcoRV	GATATC	2 cut(s)	1765, 1844
EcoT14I	CCWWGG	4 cut(s)	378, 611, 1203, 1482
EcoT22I	ATGCAT	2 cut(s)	376, 1284
ErhI	CCWWGG	4 cut(s)	378, 611, 1203, 1482
FaqI	GGGAC	1 cut(s)	1233
FauI	CCCGC	2 cut(s)	87, 857
FauNDI	CATATG	2 cut(s)	261, 1967
FbaI	TGATCA	1 cut(s)	301
Fnu4HI	GCNGC	4 cut(s)	738, 741, 853, 2118
FokI	GGATG	9 cut(s)	17, 44, 361, 414, 1149, 1484, 1603, 1751, 1973
Fsp4HI	GCNGC	4 cut(s)	738, 741, 853, 2118
FspBI	CTAG	6 cut(s)	194, 627, 965, 990, 1874, 2097
GlaI	GCGC	1 cut(s)	1727
GluI	GCNGC	4 cut(s)	738, 741, 853, 2118
GsaI	CCCAGC	1 cut(s)	1987
GsuI	CTGGAG	1 cut(s)	806
HaeIII	GGCC	3 cut(s)	406, 1453, 2157
HgaI	GACGC	1 cut(s)	1330
HhaI	GCGC	1 cut(s)	1728
Hin6I	GCGC	1 cut(s)	1726
HinP1I	GCGC	1 cut(s)	1726
HincII	GTYRAC	3 cut(s)	64, 436, 1543
HindII	GTYRAC	3 cut(s)	64, 436, 1543
HindIII	AAGCTT	1 cut(s)	1440
HphI	GGTGA	3 cut(s)	794, 1799, 2090
Hpy166II	GTNNAC	6 cut(s)	64, 436, 568, 765, 1543, 2069
Hpy8I	GTNNAC	6 cut(s)	64, 436, 568, 765, 1543, 2069
HpyAV	CCTTC	6 cut(s)	439, 606, 1023, 1213, 1820, 2042
HpyCH4III	ACNGT	8 cut(s)	123, 424, 536, 862, 871, 1414, 1600, 2044
HpyCH4IV	ACGT	1 cut(s)	2071
HpyF10VI	GCNNNNNNNGC	5 cut(s)	41, 254, 650, 2154, 2159
HpyF3I	CTNAG	9 cut(s)	396, 660, 903, 1176, 1455, 1588, 1798, 1847, 2014
HpySE526I	ACGT	1 cut(s)	2071
HspAI	GCGC	1 cut(s)	1726
KpnI	GGTACC	1 cut(s)	2196
Ksp22I	TGATCA	1 cut(s)	301
KspI	CCGCGG	1 cut(s)	853
Kzo9I	GATC	8 cut(s)	235, 301, 529, 685, 1075, 1150, 1388, 2080
LguI	GCTCTTC	1 cut(s)	1894
LmnI	GCTCC	3 cut(s)	391, 968, 2145
Lsp1109I	GCAGC	3 cut(s)	727, 749, 2104
LweI	GCATC	3 cut(s)	22, 361, 383
MaeI	CTAG	6 cut(s)	194, 627, 965, 990, 1874, 2097
MaeII	ACGT	1 cut(s)	2071
MaeIII	GTNAC	6 cut(s)	322, 418, 583, 835, 862, 2038
MalI	GATC	8 cut(s)	237, 303, 531, 687, 1077, 1152, 1390, 2082
MboI	GATC	8 cut(s)	235, 301, 529, 685, 1075, 1150, 1388, 2080
MboII	GAAGA	9 cut(s)	78, 554, 680, 1191, 1228, 1470, 1802, 1881, 1921
MflI	RGATCY	3 cut(s)	235, 1075, 1150
MhlI	GDGCHC	1 cut(s)	388
MlsI	TGGCCA	2 cut(s)	406, 2157
MluNI	TGGCCA	2 cut(s)	406, 2157
MlyI	GAGTC	7 cut(s)	431, 591, 1205, 1378, 1469, 1823, 1855
MmeI	TCCRAC	3 cut(s)	47, 939, 1170
Mox20I	TGGCCA	2 cut(s)	406, 2157
Mph1103I	ATGCAT	2 cut(s)	376, 1284
MroXI	GAANNNNTTC	1 cut(s)	595
MscI	TGGCCA	2 cut(s)	406, 2157
MseI	TTAA	4 cut(s)	210, 557, 801, 1719
MslI	CAYNNNNRTG	1 cut(s)	1272
Msp20I	TGGCCA	2 cut(s)	406, 2157
MspA1I	CMGCKG	5 cut(s)	740, 852, 1436, 1983, 2117
MspR9I	CCNGG	4 cut(s)	488, 824, 1023, 1952
Mva1269I	GAATGC	2 cut(s)	1282, 1889
MvaI	CCWGG	4 cut(s)	488, 824, 1023, 1952
MvnI	CGCG	1 cut(s)	852
MwoI	GCNNNNNNNGC	5 cut(s)	41, 254, 650, 2154, 2159
NcoI	CCATGG	3 cut(s)	378, 1203, 1482
NdeI	CATATG	2 cut(s)	261, 1967
NdeII	GATC	8 cut(s)	235, 301, 529, 685, 1075, 1150, 1388, 2080
NheI	GCTAGC	1 cut(s)	989
NlaIV	GGNNCC	3 cut(s)	828, 1488, 2194
NmuCI	GTSAC	2 cut(s)	583, 835
NsiI	ATGCAT	2 cut(s)	376, 1284
NspI	RCATGY	4 cut(s)	146, 351, 566, 1282
PaeI	GCATGC	1 cut(s)	146
PasI	CCCWGGG	1 cut(s)	487
PciI	ACATGT	1 cut(s)	562
PciSI	GCTCTTC	1 cut(s)	1894
PctI	GAATGC	2 cut(s)	1282, 1889
PdmI	GAANNNNTTC	1 cut(s)	595
PfeI	GAWTC	4 cut(s)	956, 1567, 2025, 2111
PflMI	CCANNNNNTGG	2 cut(s)	1113, 1957
PkrI	GCNGC	4 cut(s)	739, 742, 854, 2119
PleI	GAGTC	7 cut(s)	431, 590, 1204, 1378, 1469, 1822, 1855
PmaCI	CACGTG	1 cut(s)	2072
PmlI	CACGTG	1 cut(s)	2072
PpsI	GAGTC	7 cut(s)	431, 590, 1204, 1378, 1469, 1822, 1855
Ppu21I	YACGTR	1 cut(s)	2072
PpuMI	RGGWCCY	1 cut(s)	827
PscI	ACATGT	1 cut(s)	562
PsiI	TTATAA	1 cut(s)	1778
Psp5II	RGGWCCY	1 cut(s)	827
Psp6I	CCWGG	4 cut(s)	486, 822, 1021, 1950
PspCI	CACGTG	1 cut(s)	2072
PspFI	CCCAGC	1 cut(s)	1983
PspGI	CCWGG	4 cut(s)	486, 822, 1021, 1950
PspN4I	GGNNCC	3 cut(s)	828, 1488, 2194
PspPI	GGNCC	4 cut(s)	52, 827, 1002, 1451
PspPPI	RGGWCCY	1 cut(s)	827
PstNI	CAGNNNCTG	1 cut(s)	1676
PsuI	RGATCY	3 cut(s)	235, 1075, 1150
PvuII	CAGCTG	4 cut(s)	740, 1436, 1983, 2117
RsaI	GTAC	4 cut(s)	766, 881, 891, 2194
RsaNI	GTAC	4 cut(s)	765, 880, 890, 2193
RseI	CAYNNNNRTG	1 cut(s)	1272
SacII	CCGCGG	1 cut(s)	853
SapI	GCTCTTC	1 cut(s)	1894
SaqAI	TTAA	4 cut(s)	210, 557, 801, 1719
SatI	GCNGC	4 cut(s)	738, 741, 853, 2118
Sau3AI	GATC	8 cut(s)	235, 301, 529, 685, 1075, 1150, 1388, 2080
Sau96I	GGNCC	4 cut(s)	52, 827, 1002, 1451
ScaI	AGTACT	1 cut(s)	881
SchI	GAGTC	7 cut(s)	431, 591, 1205, 1378, 1469, 1823, 1855
ScrFI	CCNGG	4 cut(s)	488, 824, 1023, 1952
SduI	GDGCHC	1 cut(s)	388
SfaNI	GCATC	3 cut(s)	22, 361, 383
SfcI	CTRYAG	2 cut(s)	666, 1634
Sfr303I	CCGCGG	1 cut(s)	853
SgrBI	CCGCGG	1 cut(s)	853
SinI	GGWCC	3 cut(s)	52, 827, 1002
SmiMI	CAYNNNNRTG	1 cut(s)	1272
SpeI	ACTAGT	1 cut(s)	626
SphI	GCATGC	1 cut(s)	146
SsiI	CCGC	4 cut(s)	94, 850, 852, 2143
SspMI	CTAG	6 cut(s)	194, 627, 965, 990, 1874, 2097
StyD4I	CCNGG	4 cut(s)	486, 822, 1021, 1950
StyI	CCWWGG	4 cut(s)	378, 611, 1203, 1482
TaaI	ACNGT	8 cut(s)	123, 424, 536, 862, 871, 1414, 1600, 2044
TaiI	ACGT	1 cut(s)	2074
TaqI	TCGA	4 cut(s)	1214, 1293, 1387, 1565
TaqII	GACCGA	1 cut(s)	1019
TatI	WGTACW	2 cut(s)	879, 889
TauI	GCSGC	1 cut(s)	855
TfiI	GAWTC	4 cut(s)	956, 1567, 2025, 2111
Tru1I	TTAA	4 cut(s)	210, 557, 801, 1719
Tru9I	TTAA	4 cut(s)	210, 557, 801, 1719
TscAI	CASTG	7 cut(s)	400, 507, 592, 767, 1138, 1417, 1875
TseFI	GTSAC	2 cut(s)	583, 835
TseI	GCWGC	3 cut(s)	737, 740, 2117
Tsp45I	GTSAC	2 cut(s)	583, 835
TspDTI	ATGAA	6 cut(s)	278, 287, 636, 914, 1709, 1869
TspGWI	ACGGA	1 cut(s)	1621
TspRI	CASTG	7 cut(s)	400, 507, 592, 767, 1138, 1417, 1875
Van91I	CCANNNNNTGG	2 cut(s)	1113, 1957
VpaK11BI	GGWCC	3 cut(s)	52, 827, 1002
XagI	CCTNNNNNAGG	1 cut(s)	600
XapI	RAATTY	9 cut(s)	266, 514, 844, 935, 1026, 1096, 1227, 1239, 1518
XceI	RCATGY	4 cut(s)	146, 351, 566, 1282
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1958, 2203
XmnI	GAANNNNTTC	1 cut(s)	595
XspI	CTAG	6 cut(s)	194, 627, 965, 990, 1874, 2097
ZrmI	AGTACT	1 cut(s)	881
Zsp2I	ATGCAT	2 cut(s)	376, 1284

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.