Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr4C

Orthogroup ID

OG0004671

Physical Location & Seq

Genomic Coordinates Reverse (-)

32765241 .. 32776315

Gene Structure 11075 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh4CG148600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1989 bp

ATGGTTGCTTCGGATATATGTCCAACCGAGGATGCCGTTCAGGCTTTTTTGGACCACTTGGTTGACCCAATACTTCCAGCAAAATCTTCTCTGCGGGATACCCCATCACTCTCTCAACAGCAGTCAGTTGCAAAACAGGTGCATGCTGTTGTGCTACTATACAATTACTACCACAGAAAGCAATGTCCAAAGCTAGAGGTTTTGTGTTTTAATTCGTTTTGCAAGTTGGTTTTGGATCTGAAACCAGCCTTGCTAGCTCATATGAAATTTATGAAAAGGTCAGGTGATACTGAATTGGTTGATCAGGAGAAACAATTTTCAGTTACTGAAAGAACAATAATGGAAGCATGTCAAATATCTACAAGTTTAGATGCATCCATGGGTGCTCCAAACACTGAGGGATGGCCAATTTCCAAAGTTACAGTTCTTTTAGTTGACTCCAAGAAGGAGAACTGCTATTTGCAATTCAGTTCCAATTCCATGACCCAGGGGGTTTGGTCAGTGATTGATAAAAATTTGGAGGTCAGAGATCACAGTTCAGAAGATACAAGGGGGTTAAAACATGTAAACAAAAGCAAAAGAGTCACTGGAAAACCTTCAAGAGGAGAACCAAGGATTGATGAAACTAGTTGTCAAAAACTGGCATATTCAGCAATTACTGAGGCTACAGGTATTAGTCAAAATGATCTTCTTGTTTTGGAAAGCCATGTCGTATTTTCGGATAGTAAAGAAAAGGCAGCTGCTTGTTTTTTTATAGTTCAGTGTACCCAATCAGGCAAGGGTGATATTCAGCTTCCTATTAAAGATGTTATTGACAGCCTCCAGGGTCCTCTGGTCACAAAGAATTCCCGTGGCTGGACAGTTACAACAGTTGTTGAGTACTTCCATGTGCTTCCTTATGCTGAGATTTTGTCCGACTGGTTTCATAGGAGAGAATTCTCAAATGGTTTGAAAGATTCAAGGCTAGGAGCGGGAAATGTAAATGTGGCTAGCCCTAAAAGGACCGAAACACCTTCCAAACCAGGAATTTGCAAAAATCAAGAGAAGTCTCATGTAATTGATGTTGTGATAGAGGATCTTGGAAGCAACACAAAAAATTCTGAACCCAAATCATGGGAGCAAAAAGATAGCAGTGGATGTTGCAAGATAGATCTGGCTCATGCTTTCAATGGGTCTCAGGAAATGGAGTTGGAGGGGTCTTCCATGGTTGCCTCGAAGAAGGAAAAAATTTGTAAGAAAATTTCAAGTCCCGTTCAAGTTGTCAGCCACCAAGATGACATGCATTCCTGTATCGAAAGTGAAAAGCCCAAAACCCAAGACAAGTTGTCTCATGTAAATTGCGTCAGGATAAAGGATATTGGGAACAGCATAAGCAGTTCTACGCCTCGATCATATAAGCAGAAAGATACCACTGTATATAAAAATACAAGTCCTGCTGAAGCTTCCAATGGGCCTCAGAAATTGTGCATAGATGACTGTTCCATGGTTCCCTTGCAGAATGTAGATAGCTGTGAGAAAATTTCAAGCACCATTCAAGTTGTCAATCAGCAAAAAAAGATTTCCTTGATTCGCTCTGAACTAAATGGCTCAGTAAGTAATACGAAGGTTGAGACTGTGAACCAGACAAGTCAATCCCTTACTGAAAAGCTACAGATTAGTATAGCTTCAAAAGAACACATCTTGTCAGAAACTGCTTTGAAAGTTCTTATGAAAAAAAGGAATGAGCTGTCTATTAAGAAGCGCAATATACAGGATGAGCTTGCTCGGTGTGAAAAAGATATCCAGACAATTATAAATGGTGGTGAAGATGGCTCAGCAGTAATAGTTGAGTCTCTTATAGAAGGTTGTAATGATGGATATCTAAGAAATGAAAGGACTCATACACTGCTAGAAGAGGAATGCTCTTCTAAATCTGTCAAGAGGAAGAGGCTGTCAGAGGCTATCCTTGACAAGCAAAATCAATGCCAGGTAAGATATGATATCCAATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DND1_DSRM

Protein Analysis

662

Amino Acids

73.62

Weight (kDa)

7.19

Isoelectric Point (pI)

44.46

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DUF7913	PF25500	6 - 124	3.1e-55	Domain of unknown function (DUF7913)
DUF7915	PF25502	162 - 310	8.4e-63	Domain of unknown function (DUF7915)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004671)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G05950 AT1G05950 AT1G05950 AT1G05950 AT1G05950
fragaria_vesca	FvH4_4g10700 FvH4_4g10700 FvH4_4g10700 FvH4_4g10700 FvH4_4g10700 FvH4_4g10700 FvH4_4g10700 FvH4_4g10700 FvH4_4g10700 FvH4_4g10700
malus_domestica	MD04G1007700.v1.1
prunus_persica	Prupe.1G191700_v2.0.a1 Prupe.1G191700_v2.0.a1 Prupe.1G191700_v2.0.a1
rosa_chinensis	RchiOBHm_Chr4g0407011
rosa_laevigata	RLG00000008744
rosa_multiflora	Rmu_sc0000600.1_g000013
rosa_roxburghii	Rroxscaffold_5G00351720
rosa_rugosa	Rorug04G0076500 Rorug04G0076600 Rorug04G0076700
rosa_samantha	Rh4AG142000 Rh4BG139200 Rh4CG148600 Rh4DG136200
rosa_wichuraiana	Rw4G011570

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1793
AccB7I	CCANNNNNTGG	1 cut(s)	1113
AccBSI	CCGCTC	1 cut(s)	971
AciI	CCGC	2 cut(s)	94, 971
AclWI	GGATC	2 cut(s)	243, 1083
AcoI	YGGCCR	1 cut(s)	404
AcsI	RAATTY	9 cut(s)	266, 514, 844, 935, 1026, 1096, 1227, 1239, 1518
AcuI	CTGAAG	1 cut(s)	1458
AfaI	GTAC	2 cut(s)	766, 881
AfiI	CCNNNNNNNGG	3 cut(s)	602, 855, 1113
AflIII	ACRYGT	1 cut(s)	562
AhdI	GACNNNNNGTC	1 cut(s)	1324
AhlI	ACTAGT	1 cut(s)	626
AjnI	CCWGG	4 cut(s)	486, 822, 1021, 1965
Alw21I	GWGCWC	1 cut(s)	388
Alw26I	GTCTC	5 cut(s)	1053, 1179, 1332, 1604, 1836
AlwI	GGATC	2 cut(s)	243, 1083
AlwNI	CAGNNNCTG	2 cut(s)	326, 1691
AoxI	GGCC	2 cut(s)	404, 1451
ApeKI	GCWGC	2 cut(s)	737, 740
ApoI	RAATTY	9 cut(s)	266, 514, 844, 935, 1026, 1096, 1227, 1239, 1518
Asp700I	GAANNNNTTC	1 cut(s)	595
AspLEI	GCGC	1 cut(s)	1743
AspS9I	GGNCC	4 cut(s)	52, 827, 1002, 1451
AsuHPI	GGTGA	3 cut(s)	296, 794, 1814
AsuNHI	GCTAGC	2 cut(s)	253, 989
AvaII	GGWCC	3 cut(s)	52, 827, 1002
BaeI	ACNNNNGTAYC	2 cut(s)	1398, 1431
BalI	TGGCCA	1 cut(s)	406
BbsI	GAAGAC	1 cut(s)	1191
Bbv12I	GWGCWC	1 cut(s)	388
BbvI	GCAGC	2 cut(s)	727, 749
BccI	CCATC	4 cut(s)	112, 396, 1802, 1847
BceAI	ACGGC	1 cut(s)	20
BciT130I	CCWGG	4 cut(s)	488, 824, 1023, 1967
BciVI	GTATCC	1 cut(s)	91
BclI	TGATCA	1 cut(s)	301
BcoDI	GTCTC	5 cut(s)	1053, 1179, 1332, 1604, 1836
BcuI	ACTAGT	1 cut(s)	626
BfaI	CTAG	6 cut(s)	194, 254, 627, 965, 990, 1889
BfmI	CTRYAG	2 cut(s)	666, 1649
BfuI	GTATCC	1 cut(s)	91
BglI	GCCNNNNNGGC	1 cut(s)	41
BglII	AGATCT	1 cut(s)	1150
BisI	GCNGC	2 cut(s)	738, 741
BlpI	GCTNAGC	1 cut(s)	1813
BlsI	GCNGC	2 cut(s)	739, 742
BmcAI	AGTACT	1 cut(s)	881
Bme1390I	CCNGG	4 cut(s)	488, 824, 1023, 1967
Bme18I	GGWCC	3 cut(s)	52, 827, 1002
BmeRI	GACNNNNNGTC	1 cut(s)	1324
BmgT120I	GGNCC	4 cut(s)	52, 827, 1002, 1451
BmiI	GGNNCC	2 cut(s)	828, 1488
BmrFI	CCNGG	4 cut(s)	488, 824, 1023, 1967
BmsI	GCATC	3 cut(s)	22, 361, 383
BmtI	GCTAGC	2 cut(s)	257, 993
BpiI	GAAGAC	1 cut(s)	1191
BplI	GAGNNNNNCTC	2 cut(s)	1886, 1918
BpmI	CTGGAG	1 cut(s)	806
Bpu1102I	GCTNAGC	1 cut(s)	1813
BsaBI	GATNNNNATC	1 cut(s)	1857
BsaI	GGTCTC	1 cut(s)	1179
BsaJI	CCNNGG	9 cut(s)	27, 378, 486, 487, 611, 823, 850, 1203, 1482
Bsc4I	CCNNNNNNNGG	3 cut(s)	602, 855, 1113
Bse1I	ACTGG	3 cut(s)	592, 645, 923
Bse3DI	GCAATG	1 cut(s)	188
Bse8I	GATNNNNATC	1 cut(s)	1857
BseBI	CCWGG	4 cut(s)	488, 824, 1023, 1967
BseDI	CCNNGG	9 cut(s)	27, 378, 486, 487, 611, 823, 850, 1203, 1482
BseGI	GGATG	5 cut(s)	37, 374, 407, 1142, 1759
BseJI	GATNNNNATC	1 cut(s)	1857
BseLI	CCNNNNNNNGG	3 cut(s)	602, 855, 1113
BseMI	GCAATG	1 cut(s)	188
BseMII	CTCAG	7 cut(s)	387, 651, 894, 1190, 1469, 1602, 1827
BseNI	ACTGG	3 cut(s)	592, 645, 923
BseRI	GAGGAG	1 cut(s)	618
BseXI	GCAGC	2 cut(s)	727, 749
BshFI	GGCC	2 cut(s)	406, 1453
BsiHKAI	GWGCWC	1 cut(s)	388
BslFI	GGGAC	1 cut(s)	1233
BslI	CCNNNNNNNGG	3 cut(s)	602, 855, 1113
BsmAI	GTCTC	5 cut(s)	1053, 1179, 1332, 1604, 1836
BsmFI	GGGAC	1 cut(s)	1233
BsmI	GAATGC	2 cut(s)	1282, 1904
BsnI	GGCC	2 cut(s)	406, 1453
Bso31I	GGTCTC	1 cut(s)	1179
Bsp1286I	GDGCHC	1 cut(s)	388
Bsp143I	GATC	7 cut(s)	235, 301, 529, 685, 1075, 1150, 1388
Bsp1720I	GCTNAGC	1 cut(s)	1813
Bsp19I	CCATGG	3 cut(s)	378, 1203, 1482
BspACI	CCGC	2 cut(s)	94, 971
BspANI	GGCC	2 cut(s)	406, 1453
BspCNI	CTCAG	7 cut(s)	388, 652, 895, 1189, 1468, 1601, 1826
BspLI	GGNNCC	2 cut(s)	828, 1488
BspOI	GCTAGC	2 cut(s)	257, 993
BspPI	GGATC	2 cut(s)	243, 1083
BspQI	GCTCTTC	1 cut(s)	1909
BspTNI	GGTCTC	1 cut(s)	1179
BsrBI	CCGCTC	1 cut(s)	971
BsrDI	GCAATG	1 cut(s)	188
BsrI	ACTGG	3 cut(s)	592, 645, 923
BssECI	CCNNGG	9 cut(s)	27, 378, 486, 487, 611, 823, 850, 1203, 1482
BssMI	GATC	7 cut(s)	235, 301, 529, 685, 1075, 1150, 1388
BssT1I	CCWWGG	4 cut(s)	378, 611, 1203, 1482
Bst2UI	CCWGG	4 cut(s)	488, 824, 1023, 1967
Bst4CI	ACNGT	7 cut(s)	424, 536, 862, 871, 1414, 1478, 1615
Bst6I	CTCTTC	3 cut(s)	1887, 1909, 1919
BstC8I	GCNNGC	4 cut(s)	144, 255, 991, 1761
BstDEI	CTNAG	8 cut(s)	396, 660, 903, 1176, 1455, 1588, 1813, 1862
BstDSI	CCRYGG	4 cut(s)	378, 850, 1203, 1482
BstENI	CCTNNNNNAGG	1 cut(s)	600
BstF5I	GGATG	5 cut(s)	37, 374, 407, 1142, 1759
BstHHI	GCGC	1 cut(s)	1743
BstKTI	GATC	7 cut(s)	238, 304, 532, 688, 1078, 1153, 1391
BstMAI	GTCTC	5 cut(s)	1053, 1179, 1332, 1604, 1836
BstMBI	GATC	7 cut(s)	235, 301, 529, 685, 1075, 1150, 1388
BstMWI	GCNNNNNNNGC	3 cut(s)	41, 254, 650
BstNI	CCWGG	4 cut(s)	488, 824, 1023, 1967
BstNSI	RCATGY	4 cut(s)	146, 351, 566, 1282
BstSCI	CCNGG	4 cut(s)	486, 822, 1021, 1965
BstSFI	CTRYAG	2 cut(s)	666, 1649
BstV1I	GCAGC	2 cut(s)	727, 749
BstV2I	GAAGAC	1 cut(s)	1191
BstX2I	RGATCY	3 cut(s)	235, 1075, 1150
BstYI	RGATCY	3 cut(s)	235, 1075, 1150
BsuI	GTATCC	1 cut(s)	91
BsuRI	GGCC	2 cut(s)	406, 1453
BtgI	CCRYGG	4 cut(s)	378, 850, 1203, 1482
BtsCI	GGATG	5 cut(s)	37, 374, 407, 1142, 1759
BtsI	GCAGTG	2 cut(s)	1138, 1883
BtsIMutI	CAGTG	7 cut(s)	393, 507, 585, 767, 1138, 1410, 1883
Cac8I	GCNNGC	4 cut(s)	144, 255, 991, 1761
CaiI	CAGNNNCTG	2 cut(s)	326, 1691
CfoI	GCGC	1 cut(s)	1743
Cfr13I	GGNCC	4 cut(s)	52, 827, 1002, 1451
CseI	GACGC	1 cut(s)	1330
Csp6I	GTAC	2 cut(s)	765, 880
CviQI	GTAC	2 cut(s)	765, 880
DdeI	CTNAG	8 cut(s)	396, 660, 903, 1176, 1455, 1588, 1813, 1862
DpnI	GATC	7 cut(s)	237, 303, 531, 687, 1077, 1152, 1390
DpnII	GATC	7 cut(s)	235, 301, 529, 685, 1075, 1150, 1388
DriI	GACNNNNNGTC	1 cut(s)	1324
EaeI	YGGCCR	1 cut(s)	404
Eam1104I	CTCTTC	3 cut(s)	1887, 1909, 1919
Eam1105I	GACNNNNNGTC	1 cut(s)	1324
EarI	CTCTTC	3 cut(s)	1887, 1909, 1919
Eco130I	CCWWGG	4 cut(s)	378, 611, 1203, 1482
Eco31I	GGTCTC	1 cut(s)	1179
Eco32I	GATATC	3 cut(s)	1780, 1859, 1981
Eco47I	GGWCC	3 cut(s)	52, 827, 1002
Eco57I	CTGAAG	1 cut(s)	1458
EcoNI	CCTNNNNNAGG	1 cut(s)	600
EcoO109I	RGGNCCY	1 cut(s)	827
EcoRI	GAATTC	2 cut(s)	844, 935
EcoRII	CCWGG	4 cut(s)	486, 822, 1021, 1965
EcoRV	GATATC	3 cut(s)	1780, 1859, 1981
EcoT14I	CCWWGG	4 cut(s)	378, 611, 1203, 1482
EcoT22I	ATGCAT	2 cut(s)	376, 1284
ErhI	CCWWGG	4 cut(s)	378, 611, 1203, 1482
FalI	AAGNNNNNCTT	2 cut(s)	1547, 1579
FaqI	GGGAC	1 cut(s)	1233
FauI	CCCGC	2 cut(s)	87, 964
FauNDI	CATATG	1 cut(s)	261
FbaI	TGATCA	1 cut(s)	301
Fnu4HI	GCNGC	2 cut(s)	738, 741
FokI	GGATG	5 cut(s)	44, 361, 414, 1149, 1766
Fsp4HI	GCNGC	2 cut(s)	738, 741
FspBI	CTAG	6 cut(s)	194, 254, 627, 965, 990, 1889
GlaI	GCGC	1 cut(s)	1742
GluI	GCNGC	2 cut(s)	738, 741
GsuI	CTGGAG	1 cut(s)	806
HaeIII	GGCC	2 cut(s)	406, 1453
HgaI	GACGC	1 cut(s)	1330
HhaI	GCGC	1 cut(s)	1743
Hin6I	GCGC	1 cut(s)	1741
HinP1I	GCGC	1 cut(s)	1741
HincII	GTYRAC	2 cut(s)	64, 436
HindII	GTYRAC	2 cut(s)	64, 436
HindIII	AAGCTT	1 cut(s)	1440
HinfI	GANTC	6 cut(s)	437, 582, 956, 1567, 1829, 1876
HphI	GGTGA	3 cut(s)	296, 794, 1814
Hpy166II	GTNNAC	5 cut(s)	64, 436, 568, 765, 1618
Hpy188III	TCNNGA	7 cut(s)	305, 600, 1040, 1178, 1345, 1783, 1918
Hpy8I	GTNNAC	5 cut(s)	64, 436, 568, 765, 1618
HpyAV	CCTTC	6 cut(s)	439, 606, 1023, 1213, 1597, 1835
HpyCH4III	ACNGT	7 cut(s)	424, 536, 862, 871, 1414, 1478, 1615
HpyF10VI	GCNNNNNNNGC	3 cut(s)	41, 254, 650
HpyF3I	CTNAG	8 cut(s)	396, 660, 903, 1176, 1455, 1588, 1813, 1862
HspAI	GCGC	1 cut(s)	1741
Ksp22I	TGATCA	1 cut(s)	301
Kzo9I	GATC	7 cut(s)	235, 301, 529, 685, 1075, 1150, 1388
LguI	GCTCTTC	1 cut(s)	1909
LmnI	GCTCC	3 cut(s)	391, 968, 1117
Lsp1109I	GCAGC	2 cut(s)	727, 749
LweI	GCATC	3 cut(s)	22, 361, 383
MaeI	CTAG	6 cut(s)	194, 254, 627, 965, 990, 1889
MaeIII	GTNAC	5 cut(s)	322, 418, 583, 835, 862
MalI	GATC	7 cut(s)	237, 303, 531, 687, 1077, 1152, 1390
MbiI	CCGCTC	1 cut(s)	971
MboI	GATC	7 cut(s)	235, 301, 529, 685, 1075, 1150, 1388
MboII	GAAGA	9 cut(s)	78, 554, 680, 1191, 1228, 1817, 1896, 1904, 1936
MflI	RGATCY	3 cut(s)	235, 1075, 1150
MhlI	GDGCHC	1 cut(s)	388
MlsI	TGGCCA	1 cut(s)	406
MluNI	TGGCCA	1 cut(s)	406
MlyI	GAGTC	4 cut(s)	431, 591, 1838, 1870
MmeI	TCCRAC	3 cut(s)	47, 939, 1170
Mox20I	TGGCCA	1 cut(s)	406
Mph1103I	ATGCAT	2 cut(s)	376, 1284
MroXI	GAANNNNTTC	1 cut(s)	595
MscI	TGGCCA	1 cut(s)	406
MseI	TTAA	4 cut(s)	210, 557, 801, 1734
MslI	CAYNNNNRTG	1 cut(s)	1272
Msp20I	TGGCCA	1 cut(s)	406
MspA1I	CMGCKG	1 cut(s)	740
MspR9I	CCNGG	4 cut(s)	488, 824, 1023, 1967
Mva1269I	GAATGC	2 cut(s)	1282, 1904
MvaI	CCWGG	4 cut(s)	488, 824, 1023, 1967
MwoI	GCNNNNNNNGC	3 cut(s)	41, 254, 650
NcoI	CCATGG	3 cut(s)	378, 1203, 1482
NdeI	CATATG	1 cut(s)	261
NdeII	GATC	7 cut(s)	235, 301, 529, 685, 1075, 1150, 1388
NheI	GCTAGC	2 cut(s)	253, 989
NlaIV	GGNNCC	2 cut(s)	828, 1488
NmuCI	GTSAC	2 cut(s)	583, 835
NsiI	ATGCAT	2 cut(s)	376, 1284
NspI	RCATGY	4 cut(s)	146, 351, 566, 1282
PaeI	GCATGC	1 cut(s)	146
PasI	CCCWGGG	1 cut(s)	487
PciI	ACATGT	1 cut(s)	562
PciSI	GCTCTTC	1 cut(s)	1909
PctI	GAATGC	2 cut(s)	1282, 1904
PdmI	GAANNNNTTC	1 cut(s)	595
PfeI	GAWTC	2 cut(s)	956, 1567
PflMI	CCANNNNNTGG	1 cut(s)	1113
PkrI	GCNGC	2 cut(s)	739, 742
PleI	GAGTC	4 cut(s)	431, 590, 1837, 1870
PpsI	GAGTC	4 cut(s)	431, 590, 1837, 1870
PpuMI	RGGWCCY	1 cut(s)	827
PscI	ACATGT	1 cut(s)	562
PsiI	TTATAA	1 cut(s)	1793
Psp5II	RGGWCCY	1 cut(s)	827
Psp6I	CCWGG	4 cut(s)	486, 822, 1021, 1965
PspGI	CCWGG	4 cut(s)	486, 822, 1021, 1965
PspN4I	GGNNCC	2 cut(s)	828, 1488
PspPI	GGNCC	4 cut(s)	52, 827, 1002, 1451
PspPPI	RGGWCCY	1 cut(s)	827
PstNI	CAGNNNCTG	2 cut(s)	326, 1691
PsuI	RGATCY	3 cut(s)	235, 1075, 1150
PvuII	CAGCTG	1 cut(s)	740
RsaI	GTAC	2 cut(s)	766, 881
RsaNI	GTAC	2 cut(s)	765, 880
RseI	CAYNNNNRTG	1 cut(s)	1272
SapI	GCTCTTC	1 cut(s)	1909
SaqAI	TTAA	4 cut(s)	210, 557, 801, 1734
SatI	GCNGC	2 cut(s)	738, 741
Sau3AI	GATC	7 cut(s)	235, 301, 529, 685, 1075, 1150, 1388
Sau96I	GGNCC	4 cut(s)	52, 827, 1002, 1451
ScaI	AGTACT	1 cut(s)	881
SchI	GAGTC	4 cut(s)	431, 591, 1838, 1870
ScrFI	CCNGG	4 cut(s)	488, 824, 1023, 1967
SduI	GDGCHC	1 cut(s)	388
SfaNI	GCATC	3 cut(s)	22, 361, 383
SfcI	CTRYAG	2 cut(s)	666, 1649
SinI	GGWCC	3 cut(s)	52, 827, 1002
SmiMI	CAYNNNNRTG	1 cut(s)	1272
SpeI	ACTAGT	1 cut(s)	626
SphI	GCATGC	1 cut(s)	146
SsiI	CCGC	2 cut(s)	94, 971
SspMI	CTAG	6 cut(s)	194, 254, 627, 965, 990, 1889
StyD4I	CCNGG	4 cut(s)	486, 822, 1021, 1965
StyI	CCWWGG	4 cut(s)	378, 611, 1203, 1482
TaaI	ACNGT	7 cut(s)	424, 536, 862, 871, 1414, 1478, 1615
TaqI	TCGA	3 cut(s)	1214, 1293, 1387
TaqII	GACCGA	1 cut(s)	1019
TatI	WGTACW	1 cut(s)	879
TfiI	GAWTC	2 cut(s)	956, 1567
Tru1I	TTAA	4 cut(s)	210, 557, 801, 1734
Tru9I	TTAA	4 cut(s)	210, 557, 801, 1734
TscAI	CASTG	7 cut(s)	400, 507, 592, 767, 1138, 1417, 1890
TseFI	GTSAC	2 cut(s)	583, 835
TseI	GCWGC	2 cut(s)	737, 740
Tsp45I	GTSAC	2 cut(s)	583, 835
TspDTI	ATGAA	6 cut(s)	278, 287, 636, 914, 1724, 1884
TspRI	CASTG	7 cut(s)	400, 507, 592, 767, 1138, 1417, 1890
Van91I	CCANNNNNTGG	1 cut(s)	1113
VpaK11BI	GGWCC	3 cut(s)	52, 827, 1002
XagI	CCTNNNNNAGG	1 cut(s)	600
XapI	RAATTY	9 cut(s)	266, 514, 844, 935, 1026, 1096, 1227, 1239, 1518
XceI	RCATGY	4 cut(s)	146, 351, 566, 1282
XmnI	GAANNNNTTC	1 cut(s)	595
XspI	CTAG	6 cut(s)	194, 254, 627, 965, 990, 1889
ZrmI	AGTACT	1 cut(s)	881
Zsp2I	ATGCAT	2 cut(s)	376, 1284

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.