Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0000600.1

Orthogroup ID

OG0004671

Physical Location & Seq

Genomic Coordinates Forward (+)

98595 .. 109664

Gene Structure 11070 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0000600.1_g000013.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2418 bp

atggttgcttcggatatatgtccaaccgaggatgccgttcaggcttttttggaccacttggttgacccaatacttccagcaaaatcttctctgcgggataccccatcgttctctcaacagcagtcagttgcaaaacaggtgcatgctgttgtgctactatacaattactaccacagaaagcaatgtccaaagctagaggttttgtgttttaattcgttttgcaagttggttttggatctgaaaccagccttgctagctcatatgaaatttatgaaaaggtcaggtgatactgaattagttgatctggagaaacaactttcagttaccgaaagaacaataatggaagcatgtcaaatatctacaagtttagatgcatccatgggtgctccaaacactgagggatggccaatttccaaagttacagttcttttagttgactccaagaaggagaactgctatttgcaattcagttccaattccatgacccagggggtttggtcagtgattgataaaaatttggaggtcagagatcacagttcagaagacacaagggggttaaaacatgtaaacaaaagcaaaagagtcactggaaaaccttcaagaggagaaccaaggattgatgaaactagttgtcaaaaactggcatattcagcaattactgaggctacaggtattagtcaaaatgatcttcttgttttggaaagccatgttgtattttcggatagtaaagaaaaggcagctgcttgtttttttatagttcagtgtacccaatcaggcaagggtgatattcagcttcctattaaagatggtcctctggtcacaaagaattcccgcagctggacagttacaacagttgttgagtacttccatgtgcttccttatgctgagattttgtccgactggtttcataggagagaattctcaaatggtttgaaagattctgaacccaaaccaggaatttgcaaaaatcaagagaagtctcatgtaattgatgttgtgatagaggatcttggaagcaacacaaaaaattctgaacccaaattatggaagcaaaaagatagcagtggatgttgcaagatagatctggctcatgctttcaatgggtctcaggaaatggagttggaggggtcttccatggttgcctcgaagaaggaaaaaatttataagaaaatttcaagtcccgttcaagttgtcagccaccaagatgacatgcattcctgtattgaaagtgaaaagcccaaaacccaagacaagttgtctcatgtaaattgcgtcaggacaaaggatattgggaatagcataagcagttctacacctcgatcatataagcagaaagataccactgtatataaaaatacaagccctgctgaagcttccaatgggcctcagaaattgttcatagatgactgttccatggttcccttgcagaatgtagaaagctgtgagaaaatttcaagcaccattcaagttgtcaatcagcaacaaaagatttcctcgattcgctctgaactaaatggctcagtaagtaatatgaaggttgagactgtgaaccggacaagtcaatcccttactgacaagctacagattagtatagcttcaaaagaacacatcttgtcagaaactgctttgaaagttcttatgaaaaaaaggaatgagctgtctattaagaagcgcaatatagaggatgagcttgctcggtgtgaaaaagatatccagacaattataaatggtggtgaagatggctcagcagtaatagttgagtctcttatagaaggttgtaatgatggatatctaagaaatgaaaggactcatacactgctagaagaggaatgctcttctaaatctgtcaagaggaagaggctgtcagaggctatccttgacaagcaaaatcaatgccaggaattggatggcatatgttgcgaaaacagctgggtgttaccaacttattgtgtatccctatcagatggaggattccaagctaatgtaaccgtagaaggtctggacttcaagtgttcacgtgagggtgatctgtgttccagtcctagtgaagcaagagaatcagctgcattgcaaattttggtaaagttgcggagcatggctggccaagccaaaaggttgcaggtcaggaatgtgaaaggtaccaatgctccttatagacaagcttcaatctttgcaccggagaagatgcattttctcttcagggttggattgtggcatgacactaagaaattagggtttgcagctaagaatcggggtggtgtagagggaccgtcaaggttttgctccccggacaaaaatggccaaggagggaatatgccttttcaatcagaaagatggagtgagtcggatcgaatctccggagttggagtaacgtttgagctcaaaatattcttcaaagcttggtccgttttctggtag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DND1_DSRM

Protein Analysis

805

Amino Acids

89.72

Weight (kDa)

7.86

Isoelectric Point (pI)

46.78

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0004671)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G05950 AT1G05950 AT1G05950 AT1G05950 AT1G05950
fragaria_vesca	FvH4_4g10700 FvH4_4g10700 FvH4_4g10700 FvH4_4g10700 FvH4_4g10700 FvH4_4g10700 FvH4_4g10700 FvH4_4g10700 FvH4_4g10700 FvH4_4g10700
malus_domestica	MD04G1007700.v1.1
prunus_persica	Prupe.1G191700_v2.0.a1 Prupe.1G191700_v2.0.a1 Prupe.1G191700_v2.0.a1
rosa_chinensis	RchiOBHm_Chr4g0407011
rosa_laevigata	RLG00000008744
rosa_multiflora	Rmu_sc0000600.1_g000013
rosa_roxburghii	Rroxscaffold_5G00351720
rosa_rugosa	Rorug04G0076500 Rorug04G0076600 Rorug04G0076700
rosa_samantha	Rh4AG142000 Rh4BG139200 Rh4CG148600 Rh4DG136200
rosa_wichuraiana	Rw4G011570

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	1164, 1724
Acc36I	ACCTGC	1 cut(s)	2110
Acc65I	GGTACC	1 cut(s)	2138
AccB1I	GGYRCC	1 cut(s)	2138
AccB7I	CCANNNNNTGG	2 cut(s)	1044, 1903
AccIII	TCCGGA	1 cut(s)	2357
AciI	CCGC	3 cut(s)	94, 832, 2089
AclI	AACGTT	1 cut(s)	2372
AclWI	GGATC	3 cut(s)	243, 1014, 2355
AcoI	YGGCCR	3 cut(s)	404, 2101, 2299
AcuI	CTGAAG	2 cut(s)	1389, 2182
AcvI	CACGTG	1 cut(s)	2018
AfaI	GTAC	3 cut(s)	766, 863, 2140
AfiI	CCNNNNNNNGG	6 cut(s)	602, 837, 953, 1044, 1903, 2412
AflIII	ACRYGT	1 cut(s)	562
AhdI	GACNNNNNGTC	1 cut(s)	1255
AhlI	ACTAGT	1 cut(s)	626
AjnI	CCWGG	3 cut(s)	486, 952, 1896
Alw21I	GWGCWC	2 cut(s)	388, 2382
Alw26I	GTCTC	5 cut(s)	984, 1110, 1263, 1535, 1767
AlwI	GGATC	3 cut(s)	243, 1014, 2355
AlwNI	CAGNNNCTG	1 cut(s)	1622
Aor13HI	TCCGGA	1 cut(s)	2357
AoxI	GGCC	4 cut(s)	404, 1382, 2101, 2299
ApeKI	GCWGC	5 cut(s)	737, 740, 834, 2063, 2240
Asp700I	GAANNNNTTC	2 cut(s)	595, 1394
Asp718I	GGTACC	1 cut(s)	2138
AspLEI	GCGC	1 cut(s)	1674
AspS9I	GGNCC	5 cut(s)	52, 809, 1382, 2267, 2403
AsuC2I	CCSGG	1 cut(s)	2288
AsuHPI	GGTGA	4 cut(s)	296, 794, 1745, 2036
AsuNHI	GCTAGC	1 cut(s)	253
AvaII	GGWCC	4 cut(s)	52, 809, 2267, 2403
BaeI	ACNNNNGTAYC	2 cut(s)	1329, 1362
BalI	TGGCCA	3 cut(s)	406, 2103, 2301
BanI	GGYRCC	1 cut(s)	2138
BanII	GRGCYC	1 cut(s)	2382
BbrPI	CACGTG	1 cut(s)	2018
BbsI	GAAGAC	2 cut(s)	549, 1122
Bbv12I	GWGCWC	2 cut(s)	388, 2382
BbvI	GCAGC	5 cut(s)	727, 749, 846, 2050, 2252
BccI	CCATC	8 cut(s)	112, 396, 800, 1733, 1778, 1901, 1958, 2328
BceAI	ACGGC	1 cut(s)	20
BciT130I	CCWGG	3 cut(s)	488, 954, 1898
BciVI	GTATCC	2 cut(s)	91, 1963
BcnI	CCSGG	1 cut(s)	2288
BcoDI	GTCTC	5 cut(s)	984, 1110, 1263, 1535, 1767
BcuI	ACTAGT	1 cut(s)	626
BfaI	CTAG	5 cut(s)	194, 254, 627, 1820, 2043
BfmI	CTRYAG	2 cut(s)	666, 1580
BfuAI	ACCTGC	1 cut(s)	2110
BfuI	GTATCC	2 cut(s)	91, 1963
BglI	GCCNNNNNGGC	1 cut(s)	41
BglII	AGATCT	1 cut(s)	1081
BisI	GCNGC	5 cut(s)	738, 741, 835, 2064, 2241
BlpI	GCTNAGC	1 cut(s)	1744
BlsI	GCNGC	5 cut(s)	739, 742, 836, 2065, 2242
BmcAI	AGTACT	1 cut(s)	863
Bme1390I	CCNGG	4 cut(s)	488, 954, 1898, 2288
Bme18I	GGWCC	4 cut(s)	52, 809, 2267, 2403
BmeRI	GACNNNNNGTC	1 cut(s)	1255
BmgT120I	GGNCC	5 cut(s)	52, 809, 1382, 2267, 2403
BmiI	GGNNCC	3 cut(s)	1419, 2140, 2268
BmrFI	CCNGG	4 cut(s)	488, 954, 1898, 2288
BmsI	GCATC	4 cut(s)	22, 361, 383, 2175
BmtI	GCTAGC	1 cut(s)	257
BpiI	GAAGAC	2 cut(s)	549, 1122
BplI	GAGNNNNNCTC	2 cut(s)	1817, 1849
BpmI	CTGGAG	1 cut(s)	326
Bpu1102I	GCTNAGC	1 cut(s)	1744
BpuMI	CCSGG	1 cut(s)	2288
BsaAI	YACGTR	1 cut(s)	2018
BsaBI	GATNNNNATC	1 cut(s)	1788
BsaI	GGTCTC	1 cut(s)	1110
BsaJI	CCNNGG	9 cut(s)	27, 378, 486, 487, 611, 1134, 1413, 2286, 2302
BsaWI	WCCGGW	3 cut(s)	1551, 2176, 2357
BsaXI	ACNNNNNCTCC	4 cut(s)	2131, 2161, 2352, 2382
Bsc4I	CCNNNNNNNGG	6 cut(s)	602, 837, 953, 1044, 1903, 2412
Bse1I	ACTGG	4 cut(s)	592, 645, 905, 2037
Bse3DI	GCAATG	2 cut(s)	188, 2066
Bse8I	GATNNNNATC	1 cut(s)	1788
BseAI	TCCGGA	1 cut(s)	2357
BseBI	CCWGG	3 cut(s)	488, 954, 1898
BseDI	CCNNGG	9 cut(s)	27, 378, 486, 487, 611, 1134, 1413, 2286, 2302
BseGI	GGATG	6 cut(s)	37, 374, 407, 1073, 1690, 1912
BseJI	GATNNNNATC	1 cut(s)	1788
BseLI	CCNNNNNNNGG	6 cut(s)	602, 837, 953, 1044, 1903, 2412
BseMI	GCAATG	2 cut(s)	188, 2066
BseMII	CTCAG	7 cut(s)	387, 651, 876, 1121, 1400, 1533, 1758
BseNI	ACTGG	4 cut(s)	592, 645, 905, 2037
BseRI	GAGGAG	1 cut(s)	618
BseXI	GCAGC	5 cut(s)	727, 749, 846, 2050, 2252
BseYI	CCCAGC	1 cut(s)	1929
BshFI	GGCC	4 cut(s)	406, 1384, 2103, 2301
BshNI	GGYRCC	1 cut(s)	2138
BsiHKAI	GWGCWC	2 cut(s)	388, 2382
BsiSI	CCGG	4 cut(s)	1552, 2177, 2288, 2358
BslFI	GGGAC	2 cut(s)	1164, 2280
BslI	CCNNNNNNNGG	6 cut(s)	602, 837, 953, 1044, 1903, 2412
BsmAI	GTCTC	5 cut(s)	984, 1110, 1263, 1535, 1767
BsmFI	GGGAC	2 cut(s)	1164, 2280
BsmI	GAATGC	2 cut(s)	1213, 1835
BsnI	GGCC	4 cut(s)	406, 1384, 2103, 2301
Bso31I	GGTCTC	1 cut(s)	1110
Bsp1286I	GDGCHC	2 cut(s)	388, 2382
Bsp13I	TCCGGA	1 cut(s)	2357
Bsp143I	GATC	9 cut(s)	235, 301, 529, 685, 1006, 1081, 1319, 2026, 2347
Bsp1720I	GCTNAGC	1 cut(s)	1744
Bsp19I	CCATGG	3 cut(s)	378, 1134, 1413
BspACI	CCGC	3 cut(s)	94, 832, 2089
BspANI	GGCC	4 cut(s)	406, 1384, 2103, 2301
BspCNI	CTCAG	7 cut(s)	388, 652, 877, 1120, 1399, 1532, 1757
BspEI	TCCGGA	1 cut(s)	2357
BspLI	GGNNCC	3 cut(s)	1419, 2140, 2268
BspMI	ACCTGC	1 cut(s)	2110
BspOI	GCTAGC	1 cut(s)	257
BspPI	GGATC	3 cut(s)	243, 1014, 2355
BspQI	GCTCTTC	1 cut(s)	1840
BspT107I	GGYRCC	1 cut(s)	2138
BspTNI	GGTCTC	1 cut(s)	1110
BsrDI	GCAATG	2 cut(s)	188, 2066
BsrI	ACTGG	4 cut(s)	592, 645, 905, 2037
BssECI	CCNNGG	9 cut(s)	27, 378, 486, 487, 611, 1134, 1413, 2286, 2302
BssMI	GATC	9 cut(s)	235, 301, 529, 685, 1006, 1081, 1319, 2026, 2347
BssT1I	CCWWGG	5 cut(s)	378, 611, 1134, 1413, 2302
Bst2UI	CCWGG	3 cut(s)	488, 954, 1898
Bst4CI	ACNGT	9 cut(s)	424, 536, 844, 853, 1345, 1409, 1546, 1990, 2271
Bst6I	CTCTTC	4 cut(s)	1818, 1840, 1850, 2201
BstAPI	GCANNNNNTGC	1 cut(s)	1917
BstBAI	YACGTR	1 cut(s)	2018
BstC8I	GCNNGC	4 cut(s)	144, 255, 1692, 2101
BstDSI	CCRYGG	3 cut(s)	378, 1134, 1413
BstENI	CCTNNNNNAGG	1 cut(s)	600
BstF5I	GGATG	6 cut(s)	37, 374, 407, 1073, 1690, 1912
BstHHI	GCGC	1 cut(s)	1674
BstKTI	GATC	9 cut(s)	238, 304, 532, 688, 1009, 1084, 1322, 2029, 2350
BstMAI	GTCTC	5 cut(s)	984, 1110, 1263, 1535, 1767
BstMBI	GATC	9 cut(s)	235, 301, 529, 685, 1006, 1081, 1319, 2026, 2347
BstMWI	GCNNNNNNNGC	7 cut(s)	41, 254, 650, 1917, 1926, 2100, 2105
BstNI	CCWGG	3 cut(s)	488, 954, 1898
BstNSI	RCATGY	4 cut(s)	146, 351, 566, 1213
BstSCI	CCNGG	4 cut(s)	486, 952, 1896, 2286
BstSFI	CTRYAG	2 cut(s)	666, 1580
BstV1I	GCAGC	5 cut(s)	727, 749, 846, 2050, 2252
BstV2I	GAAGAC	2 cut(s)	549, 1122
BstX2I	RGATCY	3 cut(s)	235, 1006, 1081
BstYI	RGATCY	3 cut(s)	235, 1006, 1081
BsuI	GTATCC	2 cut(s)	91, 1963
BsuRI	GGCC	4 cut(s)	406, 1384, 2103, 2301
BtgI	CCRYGG	3 cut(s)	378, 1134, 1413
BtsCI	GGATG	6 cut(s)	37, 374, 407, 1073, 1690, 1912
BtsI	GCAGTG	2 cut(s)	1069, 1814
BtsIMutI	CAGTG	7 cut(s)	393, 507, 585, 767, 1069, 1341, 1814
BveI	ACCTGC	1 cut(s)	2110
Cac8I	GCNNGC	4 cut(s)	144, 255, 1692, 2101
CaiI	CAGNNNCTG	1 cut(s)	1622
CfoI	GCGC	1 cut(s)	1674
Cfr13I	GGNCC	5 cut(s)	52, 809, 1382, 2267, 2403
CseI	GACGC	1 cut(s)	1261
Csp6I	GTAC	3 cut(s)	765, 862, 2139
CviQI	GTAC	3 cut(s)	765, 862, 2139
DpnI	GATC	9 cut(s)	237, 303, 531, 687, 1008, 1083, 1321, 2028, 2349
DpnII	GATC	9 cut(s)	235, 301, 529, 685, 1006, 1081, 1319, 2026, 2347
DriI	GACNNNNNGTC	1 cut(s)	1255
EaeI	YGGCCR	3 cut(s)	404, 2101, 2299
Eam1104I	CTCTTC	4 cut(s)	1818, 1840, 1850, 2201
Eam1105I	GACNNNNNGTC	1 cut(s)	1255
EarI	CTCTTC	4 cut(s)	1818, 1840, 1850, 2201
Ecl136II	GAGCTC	1 cut(s)	2380
Eco130I	CCWWGG	5 cut(s)	378, 611, 1134, 1413, 2302
Eco24I	GRGCYC	1 cut(s)	2382
Eco31I	GGTCTC	1 cut(s)	1110
Eco32I	GATATC	2 cut(s)	1711, 1790
Eco47I	GGWCC	4 cut(s)	52, 809, 2267, 2403
Eco53kI	GAGCTC	1 cut(s)	2380
Eco57I	CTGAAG	2 cut(s)	1389, 2182
Eco72I	CACGTG	1 cut(s)	2018
EcoICRI	GAGCTC	1 cut(s)	2380
EcoNI	CCTNNNNNAGG	1 cut(s)	600
EcoRI	GAATTC	2 cut(s)	826, 917
EcoRII	CCWGG	3 cut(s)	486, 952, 1896
EcoRV	GATATC	2 cut(s)	1711, 1790
EcoT14I	CCWWGG	5 cut(s)	378, 611, 1134, 1413, 2302
EcoT22I	ATGCAT	3 cut(s)	376, 1215, 2190
EcoT38I	GRGCYC	1 cut(s)	2382
ErhI	CCWWGG	5 cut(s)	378, 611, 1134, 1413, 2302
FaqI	GGGAC	2 cut(s)	1164, 2280
FauI	CCCGC	2 cut(s)	87, 839
FauNDI	CATATG	2 cut(s)	261, 1913
Fnu4HI	GCNGC	5 cut(s)	738, 741, 835, 2064, 2241
FokI	GGATG	6 cut(s)	44, 361, 414, 1080, 1697, 1919
FriOI	GRGCYC	1 cut(s)	2382
Fsp4HI	GCNGC	5 cut(s)	738, 741, 835, 2064, 2241
FspBI	CTAG	5 cut(s)	194, 254, 627, 1820, 2043
GlaI	GCGC	1 cut(s)	1673
GluI	GCNGC	5 cut(s)	738, 741, 835, 2064, 2241
GsaI	CCCAGC	1 cut(s)	1933
GsuI	CTGGAG	1 cut(s)	326
HaeIII	GGCC	4 cut(s)	406, 1384, 2103, 2301
HapII	CCGG	4 cut(s)	1552, 2177, 2288, 2358
HgaI	GACGC	1 cut(s)	1261
HhaI	GCGC	1 cut(s)	1674
Hin6I	GCGC	1 cut(s)	1672
HinP1I	GCGC	1 cut(s)	1672
HincII	GTYRAC	2 cut(s)	64, 436
HindII	GTYRAC	2 cut(s)	64, 436
HindIII	AAGCTT	3 cut(s)	1371, 2160, 2397
HpaII	CCGG	4 cut(s)	1552, 2177, 2288, 2358
HphI	GGTGA	4 cut(s)	296, 794, 1745, 2036
Hpy166II	GTNNAC	6 cut(s)	64, 436, 568, 765, 1549, 2015
Hpy8I	GTNNAC	6 cut(s)	64, 436, 568, 765, 1549, 2015
HpyAV	CCTTC	6 cut(s)	439, 606, 1144, 1528, 1766, 1988
HpyCH4III	ACNGT	9 cut(s)	424, 536, 844, 853, 1345, 1409, 1546, 1990, 2271
HpyCH4IV	ACGT	2 cut(s)	2017, 2372
HpyF10VI	GCNNNNNNNGC	7 cut(s)	41, 254, 650, 1917, 1926, 2100, 2105
HpySE526I	ACGT	2 cut(s)	2017, 2372
HspAI	GCGC	1 cut(s)	1672
Kpn2I	TCCGGA	1 cut(s)	2357
KpnI	GGTACC	1 cut(s)	2142
Kzo9I	GATC	9 cut(s)	235, 301, 529, 685, 1006, 1081, 1319, 2026, 2347
LguI	GCTCTTC	1 cut(s)	1840
LmnI	GCTCC	4 cut(s)	391, 2091, 2152, 2288
Lsp1109I	GCAGC	5 cut(s)	727, 749, 846, 2050, 2252
LweI	GCATC	4 cut(s)	22, 361, 383, 2175
MaeI	CTAG	5 cut(s)	194, 254, 627, 1820, 2043
MaeII	ACGT	2 cut(s)	2017, 2372
MaeIII	GTNAC	8 cut(s)	322, 418, 583, 817, 844, 1935, 1984, 2368
MalI	GATC	9 cut(s)	237, 303, 531, 687, 1008, 1083, 1321, 2028, 2349
MboI	GATC	9 cut(s)	235, 301, 529, 685, 1006, 1081, 1319, 2026, 2347
MflI	RGATCY	3 cut(s)	235, 1006, 1081
MhlI	GDGCHC	2 cut(s)	388, 2382
MlsI	TGGCCA	3 cut(s)	406, 2103, 2301
MluNI	TGGCCA	3 cut(s)	406, 2103, 2301
MlyI	GAGTC	5 cut(s)	431, 591, 1769, 1801, 2351
MmeI	TCCRAC	6 cut(s)	47, 921, 1101, 2185, 2325, 2344
Mox20I	TGGCCA	3 cut(s)	406, 2103, 2301
Mph1103I	ATGCAT	3 cut(s)	376, 1215, 2190
MroI	TCCGGA	1 cut(s)	2357
MroXI	GAANNNNTTC	2 cut(s)	595, 1394
MscI	TGGCCA	3 cut(s)	406, 2103, 2301
MseI	TTAA	4 cut(s)	210, 557, 801, 1665
MslI	CAYNNNNRTG	1 cut(s)	1203
Msp20I	TGGCCA	3 cut(s)	406, 2103, 2301
MspA1I	CMGCKG	4 cut(s)	740, 837, 1929, 2063
MspI	CCGG	4 cut(s)	1552, 2177, 2288, 2358
MspR9I	CCNGG	4 cut(s)	488, 954, 1898, 2288
Mva1269I	GAATGC	2 cut(s)	1213, 1835
MvaI	CCWGG	3 cut(s)	488, 954, 1898
MwoI	GCNNNNNNNGC	7 cut(s)	41, 254, 650, 1917, 1926, 2100, 2105
NciI	CCSGG	1 cut(s)	2288
NcoI	CCATGG	3 cut(s)	378, 1134, 1413
NdeI	CATATG	2 cut(s)	261, 1913
NdeII	GATC	9 cut(s)	235, 301, 529, 685, 1006, 1081, 1319, 2026, 2347
NheI	GCTAGC	1 cut(s)	253
NlaIV	GGNNCC	3 cut(s)	1419, 2140, 2268
NmuCI	GTSAC	2 cut(s)	583, 817
NsiI	ATGCAT	3 cut(s)	376, 1215, 2190
NspI	RCATGY	4 cut(s)	146, 351, 566, 1213
PaeI	GCATGC	1 cut(s)	146
PasI	CCCWGGG	1 cut(s)	487
PciI	ACATGT	1 cut(s)	562
PciSI	GCTCTTC	1 cut(s)	1840
PctI	GAATGC	2 cut(s)	1213, 1835
PdmI	GAANNNNTTC	2 cut(s)	595, 1394
PfeI	GAWTC	6 cut(s)	938, 1498, 1971, 2057, 2248, 2352
PflMI	CCANNNNNTGG	2 cut(s)	1044, 1903
PkrI	GCNGC	5 cut(s)	739, 742, 836, 2065, 2242
PleI	GAGTC	5 cut(s)	431, 590, 1768, 1801, 2350
PmaCI	CACGTG	1 cut(s)	2018
PmlI	CACGTG	1 cut(s)	2018
PpsI	GAGTC	5 cut(s)	431, 590, 1768, 1801, 2350
Ppu21I	YACGTR	1 cut(s)	2018
PscI	ACATGT	1 cut(s)	562
PsiI	TTATAA	2 cut(s)	1164, 1724
Psp124BI	GAGCTC	1 cut(s)	2382
Psp1406I	AACGTT	1 cut(s)	2372
Psp6I	CCWGG	3 cut(s)	486, 952, 1896
PspCI	CACGTG	1 cut(s)	2018
PspFI	CCCAGC	1 cut(s)	1929
PspGI	CCWGG	3 cut(s)	486, 952, 1896
PspN4I	GGNNCC	3 cut(s)	1419, 2140, 2268
PspPI	GGNCC	5 cut(s)	52, 809, 1382, 2267, 2403
PstNI	CAGNNNCTG	1 cut(s)	1622
PsuI	RGATCY	3 cut(s)	235, 1006, 1081
PvuII	CAGCTG	4 cut(s)	740, 837, 1929, 2063
RsaI	GTAC	3 cut(s)	766, 863, 2140
RsaNI	GTAC	3 cut(s)	765, 862, 2139
RseI	CAYNNNNRTG	1 cut(s)	1203
SacI	GAGCTC	1 cut(s)	2382
SapI	GCTCTTC	1 cut(s)	1840
SaqAI	TTAA	4 cut(s)	210, 557, 801, 1665
SatI	GCNGC	5 cut(s)	738, 741, 835, 2064, 2241
Sau3AI	GATC	9 cut(s)	235, 301, 529, 685, 1006, 1081, 1319, 2026, 2347
Sau96I	GGNCC	5 cut(s)	52, 809, 1382, 2267, 2403
ScaI	AGTACT	1 cut(s)	863
SchI	GAGTC	5 cut(s)	431, 591, 1769, 1801, 2351
ScrFI	CCNGG	4 cut(s)	488, 954, 1898, 2288
SduI	GDGCHC	2 cut(s)	388, 2382
SfaNI	GCATC	4 cut(s)	22, 361, 383, 2175
SfcI	CTRYAG	2 cut(s)	666, 1580
SinI	GGWCC	4 cut(s)	52, 809, 2267, 2403
SmiMI	CAYNNNNRTG	1 cut(s)	1203
SpeI	ACTAGT	1 cut(s)	626
SphI	GCATGC	1 cut(s)	146
SsiI	CCGC	3 cut(s)	94, 832, 2089
SspI	AATATT	1 cut(s)	2388
SspMI	CTAG	5 cut(s)	194, 254, 627, 1820, 2043
SstI	GAGCTC	1 cut(s)	2382
StyD4I	CCNGG	4 cut(s)	486, 952, 1896, 2286
StyI	CCWWGG	5 cut(s)	378, 611, 1134, 1413, 2302
TaaI	ACNGT	9 cut(s)	424, 536, 844, 853, 1345, 1409, 1546, 1990, 2271
TaiI	ACGT	2 cut(s)	2020, 2375
TaqI	TCGA	4 cut(s)	1145, 1318, 1496, 2350
TatI	WGTACW	1 cut(s)	861
TfiI	GAWTC	6 cut(s)	938, 1498, 1971, 2057, 2248, 2352
Tru1I	TTAA	4 cut(s)	210, 557, 801, 1665
Tru9I	TTAA	4 cut(s)	210, 557, 801, 1665
TscAI	CASTG	7 cut(s)	400, 507, 592, 767, 1069, 1348, 1821
TseFI	GTSAC	2 cut(s)	583, 817
TseI	GCWGC	5 cut(s)	737, 740, 834, 2063, 2240
Tsp45I	GTSAC	2 cut(s)	583, 817
TspDTI	ATGAA	8 cut(s)	278, 287, 636, 896, 1387, 1547, 1655, 1815
TspGWI	ACGGA	1 cut(s)	2395
TspRI	CASTG	7 cut(s)	400, 507, 592, 767, 1069, 1348, 1821
Van91I	CCANNNNNTGG	2 cut(s)	1044, 1903
VpaK11BI	GGWCC	4 cut(s)	52, 809, 2267, 2403
XagI	CCTNNNNNAGG	1 cut(s)	600
XceI	RCATGY	4 cut(s)	146, 351, 566, 1213
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1904
XmnI	GAANNNNTTC	2 cut(s)	595, 1394
XspI	CTAG	5 cut(s)	194, 254, 627, 1820, 2043
ZrmI	AGTACT	1 cut(s)	863
Zsp2I	ATGCAT	3 cut(s)	376, 1215, 2190

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.