FvH4_4g12840

Ubiquitin associated domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb4
OG0009633
Physical Location & Seq
Reverse (-)
16493854 .. 16497131
3278 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_4g12840.t1

Sequence Viewer

Length: 1998 bp
ATGTCTCCAGCGACTTCGAAATCCAAATCAAAGGACAAGAAGTCAGGGAAAGAGGCCCCGGCGCCTGCTTTAAAGCCGTCGGCAGGGCCTGCTAATGCAGGGAGTGGTATCCCGGCTAGTGCATACAATCCACTTCTAGGGACATTCCATACCCTTGAATTGTCACCGACTTCCGCTGCGTCGGCTATTCACAGTAATAGTCGGTTTCGGAATATAGATGAAACAGATGACCATTCTGGGGGCTCGATGGCTGCTGGAGTGGAGTATGATTCTGTTTCAAATAATGGTAGCTGGTCTGGTGAGTCAGAAGAACATAAAGACAAAACATCTAATCCTCCTGCTAAGCCAGAAACAGTACCGGGAGCTGACAACGACAAGCGAGAGAAAATTCGTCAGAAGAATGAGAGGAAGCATCAGCGTCAGAAAGAGCGGCGAGCCCAAGAGTTGCATGAACGGTGTAGCGGTTATCTTATGTCGAGAAAGCTTGAGGCACTTGCTCAACAGCTGGTGGCAATGGGTTTTGAACAAGAGAAGACGACAGAGGCTCTCATACAGAATGAAGGCCGTGTAGAGGAATCAGTAGCATGGCTTATTGAAGATGCAGAAGATGAAGATTCAGGTAAGCCAAAAGATCAAAACACTGGTGGCAGTAATTTGAAAATTGACATATCAGAAGAGCTTGCTCAGATTGCTGTTTTGGAAGCAAGGTTTAAGTGCTCGAAACAGGAGGTTGAAAGAGCTATTGTAGCCTGTGAGGGTGATCTTCATAAGGCTGCTGAAAGCTTAAGAATAGCAAAGCAAGACACACCTTCGGTTTCACCTAAGCCAGAAGAAACTGGTGATCCTCCAACTGCTAGTAACGGCAAGCTTCCAGTCACTGTTAATCAGAACTTGAGGCCACAAGTAAAATCTAATCTTCCTCCTACGATACAACAAAGAAGAGATGATAAGGACTTTAACTACACTAAACAAGGAGCTACAGTTGGAGGGCCTGTGGATTCTGCAAACAGACCTCTGCAGCCTTTGAAGAGAGGACAACCAAAGTTGGAGTGGGCAAAGGGCCAACCGACTCCAGTTCCAGCTGAGAGAAAGTGGTCAAGTGCCGGATCAAATCCTTCAGTTTCCTATTCTTTGGCTTCCCCTTTGCAGGCATCTCCACCGGTCAAGACAGAGGCACGCTATGTAGCTGTTGGAGGTGAGTTAAAAAACCTTCTGCCAGGAACAGTGAGGGAACCAGTTATCATGATGCAGCGTCCTCAATCTGTTAATACGAAGCAGGTTCCAGCTACTAGCATGAGCTCATCACCTCCAGGAAATGCCACCAATTGGTATCCTTCTACTAGTGTTGAACTTATGAGGCCGAGTGGGTTTTTGCCTCAGATACCAAGCAGTACAAGCCTCAGCACTAGCAATTTGGGTTCAAATCAGATGTACCACCAGTTTCAGTATCAACAACAGCAACAACAGCAGCAACAGCAACAACAACATCATCATTTTATTTCTGGTGTCCCTGGGGATTCTCCTGGACCTAGTAGAGGAAATAATTTGTGGAATAGAGCAGGTGCATCTCAAACACTCGCTGCTGCTTCCTCCCTAGGATTATTCTCCGGGTTGGGGTCAGCAGGTTCGTCAGGGGCATCCTCTCCAGTTGATTGGAGTGCTGGCGGTGGCTCATATAGGCACTTAGATTACAACAACATAGACTGGAGTTTGGATAGAGGTGTGACACCCTCTACAAGGCCCAACGGGTTGTGGACAGGGATGCATTCGTCTATGAAGAGCAGTGCCAACTTCTATGATCCGAAAACTACTGGTTTGGGTGCTCAATCTGCAATGAGACCAGCTTCTGCGAACATAAATGGTGTTACCCTTGTGGGTTTGCAGGATGGAGTTGCTAATGCTGATGCATCAGCTGCTGGTTCTGGGGAGTGGACTTCTCCGTTTGAAGGAGTGGATCTCTTTAGGATACCCAGACAGTTTGTTTCTTCTTCTCCGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

666

Amino Acids

71.23

Weight (kDa)

7.72

Isoelectric Point (pI)

55.24

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
UBA_7 PF22562 163 - 205 2.7e-06 UBA-like domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1550
Acc36I ACCTGC 3 cut(s) 1267, 1550, 1613
AccB1I GGYRCC 1 cut(s) 61
AccB7I CCANNNNNTGG 1 cut(s) 1326
AccBSI CCGCTC 1 cut(s) 430
AciI CCGC 4 cut(s) 174, 430, 462, 1665
AclWI GGATC 4 cut(s) 836, 1114, 1793, 1962
AcsI RAATTY 1 cut(s) 387
AcuI CTGAAG 1 cut(s) 1101
AcyI GRCGYC 1 cut(s) 62
AfaI GTAC 3 cut(s) 357, 1393, 1433
AflII CTTAAG 1 cut(s) 784
AgeI ACCGGT 1 cut(s) 1159
AhdI GACNNNNNGTC 1 cut(s) 40
AhlI ACTAGT 1 cut(s) 1340
AjnI CCWGG 4 cut(s) 1216, 1309, 1510, 1522
Alw21I GWGCWC 3 cut(s) 719, 1301, 1825
Alw26I GTCTC 2 cut(s) 9, 1831
AlwI GGATC 4 cut(s) 836, 1114, 1793, 1962
AlwNI CAGNNNCTG 4 cut(s) 89, 878, 1847, 1916
AoxI GGCC 8 cut(s) 54, 86, 562, 896, 989, 1060, 1358, 1739
ApeKI GCWGC 9 cut(s) 176, 251, 773, 1018, 1249, 1468, 1580, 1583, 1913
ApoI RAATTY 1 cut(s) 387
AsiGI ACCGGT 1 cut(s) 1159
AspA2I CCTAGG 1 cut(s) 1594
AspLEI GCGC 1 cut(s) 64
AspS9I GGNCC 6 cut(s) 55, 86, 989, 1060, 1526, 1740
AsuC2I CCSGG 4 cut(s) 59, 113, 360, 1609
AsuHPI GGTGA 7 cut(s) 156, 311, 770, 810, 851, 1208, 1296
AsuII TTCGAA 1 cut(s) 17
AvaII GGWCC 1 cut(s) 1526
AvrII CCTAGG 1 cut(s) 1594
BanI GGYRCC 1 cut(s) 61
BanII GRGCYC 3 cut(s) 245, 439, 1301
BbsI GAAGAC 1 cut(s) 539
Bbv12I GWGCWC 3 cut(s) 719, 1301, 1825
BbvCI CCTCAGC 1 cut(s) 1400
BbvI GCAGC 9 cut(s) 163, 238, 760, 1030, 1261, 1480, 1567, 1570, 1900
BccI CCATC 2 cut(s) 241, 1880
BceAI ACGGC 3 cut(s) 61, 549, 877
BciT130I CCWGG 4 cut(s) 1218, 1311, 1512, 1524
BciVI GTATCC 3 cut(s) 119, 1341, 1959
BcnI CCSGG 4 cut(s) 59, 113, 360, 1609
BcoDI GTCTC 2 cut(s) 9, 1831
BcuI ACTAGT 1 cut(s) 1340
BfaI CTAG 8 cut(s) 117, 137, 855, 1290, 1341, 1407, 1530, 1595
BfmI CTRYAG 2 cut(s) 978, 1016
BfoI RGCGCY 1 cut(s) 65
BfrI CTTAAG 1 cut(s) 784
BfuAI ACCTGC 3 cut(s) 1267, 1550, 1613
BfuI GTATCC 3 cut(s) 119, 1341, 1959
BlnI CCTAGG 1 cut(s) 1594
BlpI GCTNAGC 1 cut(s) 342
Bme1390I CCNGG 8 cut(s) 59, 113, 360, 1218, 1311, 1512, 1524, 1609
Bme18I GGWCC 1 cut(s) 1526
BmeRI GACNNNNNGTC 1 cut(s) 40
BmgT120I GGNCC 6 cut(s) 55, 86, 989, 1060, 1526, 1740
BmiI GGNNCC 4 cut(s) 57, 63, 1233, 1281
BmrFI CCNGG 8 cut(s) 59, 113, 360, 1218, 1311, 1512, 1524, 1609
BmsI GCATC 9 cut(s) 421, 589, 1160, 1236, 1574, 1646, 1752, 1894, 1916
BpiI GAAGAC 1 cut(s) 539
BplI GAGNNNNNCTC 2 cut(s) 1941, 1973
BpmI CTGGAG 5 cut(s) 276, 1056, 1293, 1629, 1726
Bpu10I CCTNAGC 2 cut(s) 822, 1400
Bpu1102I GCTNAGC 1 cut(s) 342
Bpu14I TTCGAA 1 cut(s) 17
BpuEI CTTGAG 2 cut(s) 506, 913
BpuMI CCSGG 4 cut(s) 59, 113, 360, 1609
BsaHI GRCGYC 1 cut(s) 62
BsaI GGTCTC 1 cut(s) 1831
BsaJI CCNNGG 4 cut(s) 57, 1510, 1511, 1594
BsaWI WCCGGW 1 cut(s) 1159
BsaXI ACNNNNNCTCC 4 cut(s) 966, 978, 996, 1008
Bse118I RCCGGY 1 cut(s) 1159
Bse1I ACTGG 9 cut(s) 646, 841, 872, 1073, 1235, 1438, 1646, 1709, 1816
Bse3DI GCAATG 2 cut(s) 519, 1839
BseBI CCWGG 4 cut(s) 1218, 1311, 1512, 1524
BseDI CCNNGG 4 cut(s) 57, 1510, 1511, 1594
BseGI GGATG 3 cut(s) 1637, 1767, 1891
BseMI GCAATG 2 cut(s) 519, 1839
BseMII CTCAG 4 cut(s) 698, 1074, 1391, 1414
BseNI ACTGG 9 cut(s) 646, 841, 872, 1073, 1235, 1438, 1646, 1709, 1816
BseXI GCAGC 9 cut(s) 163, 238, 760, 1030, 1261, 1480, 1567, 1570, 1900
BshFI GGCC 8 cut(s) 56, 88, 564, 898, 991, 1062, 1360, 1741
BshNI GGYRCC 1 cut(s) 61
BshTI ACCGGT 1 cut(s) 1159
BsiHKAI GWGCWC 3 cut(s) 719, 1301, 1825
BsiSI CCGG 6 cut(s) 59, 113, 359, 1104, 1160, 1608
BslFI GGGAC 2 cut(s) 154, 1493
BsmAI GTCTC 2 cut(s) 9, 1831
BsmFI GGGAC 2 cut(s) 154, 1493
BsmI GAATGC 1 cut(s) 1765
BsnI GGCC 8 cut(s) 56, 88, 564, 898, 991, 1062, 1360, 1741
Bso31I GGTCTC 1 cut(s) 1831
Bsp119I TTCGAA 1 cut(s) 17
Bsp1286I GDGCHC 5 cut(s) 245, 439, 719, 1301, 1825
Bsp143I GATC 6 cut(s) 631, 760, 841, 1106, 1798, 1954
Bsp1720I GCTNAGC 1 cut(s) 342
BspACI CCGC 4 cut(s) 174, 430, 462, 1665
BspANI GGCC 8 cut(s) 56, 88, 564, 898, 991, 1062, 1360, 1741
BspCNI CTCAG 4 cut(s) 697, 1075, 1390, 1413
BspHI TCATGA 1 cut(s) 1242
BspLI GGNNCC 4 cut(s) 57, 63, 1233, 1281
BspMAI CTGCAG 1 cut(s) 1020
BspMI ACCTGC 3 cut(s) 1267, 1550, 1613
BspPI GGATC 4 cut(s) 836, 1114, 1793, 1962
BspQI GCTCTTC 2 cut(s) 669, 1772
BspT104I TTCGAA 1 cut(s) 17
BspT107I GGYRCC 1 cut(s) 61
BspTI CTTAAG 1 cut(s) 784
BspTNI GGTCTC 1 cut(s) 1831
BsrBI CCGCTC 1 cut(s) 430
BsrDI GCAATG 2 cut(s) 519, 1839
BsrFI RCCGGY 1 cut(s) 1159
BsrI ACTGG 9 cut(s) 646, 841, 872, 1073, 1235, 1438, 1646, 1709, 1816
BssAI RCCGGY 1 cut(s) 1159
BssECI CCNNGG 4 cut(s) 57, 1510, 1511, 1594
BssMI GATC 6 cut(s) 631, 760, 841, 1106, 1798, 1954
BssNI GRCGYC 1 cut(s) 62
BssT1I CCWWGG 1 cut(s) 1594
Bst2UI CCWGG 4 cut(s) 1218, 1311, 1512, 1524
Bst4CI ACNGT 7 cut(s) 194, 355, 456, 880, 982, 1225, 1977
Bst6I CTCTTC 4 cut(s) 669, 934, 1022, 1772
BstACI GRCGYC 1 cut(s) 62
BstAFI CTTAAG 1 cut(s) 784
BstAPI GCANNNNNTGC 2 cut(s) 89, 1913
BstBI TTCGAA 1 cut(s) 17
BstC8I GCNNGC 8 cut(s) 66, 90, 435, 681, 866, 1149, 1177, 1663
BstDEI CTNAG 7 cut(s) 342, 684, 822, 1083, 1377, 1400, 1684
BstENI CCTNNNNNAGG 2 cut(s) 1533, 1735
BstF5I GGATG 3 cut(s) 1637, 1767, 1891
BstH2I RGCGCY 1 cut(s) 65
BstHHI GCGC 1 cut(s) 64
BstKTI GATC 6 cut(s) 634, 763, 844, 1109, 1801, 1957
BstMAI GTCTC 2 cut(s) 9, 1831
BstMBI GATC 6 cut(s) 631, 760, 841, 1106, 1798, 1954
BstMWI GCNNNNNNNGC 9 cut(s) 89, 182, 689, 746, 1395, 1465, 1474, 1829, 1913
BstNI CCWGG 4 cut(s) 1218, 1311, 1512, 1524
BstSCI CCNGG 8 cut(s) 57, 111, 358, 1216, 1309, 1510, 1522, 1607
BstSFI CTRYAG 2 cut(s) 978, 1016
BstV1I GCAGC 9 cut(s) 163, 238, 760, 1030, 1261, 1480, 1567, 1570, 1900
BstV2I GAAGAC 1 cut(s) 539
BstX2I RGATCY 1 cut(s) 1954
BstXI CCANNNNNNTGG 1 cut(s) 1653
BstYI RGATCY 1 cut(s) 1954
BsuI GTATCC 3 cut(s) 119, 1341, 1959
BsuRI GGCC 8 cut(s) 56, 88, 564, 898, 991, 1062, 1360, 1741
BtsCI GGATG 3 cut(s) 1637, 1767, 1891
BtsI GCAGTG 1 cut(s) 1789
BtsIMutI CAGTG 4 cut(s) 639, 876, 1230, 1789
BveI ACCTGC 3 cut(s) 1267, 1550, 1613
Cac8I GCNNGC 8 cut(s) 66, 90, 435, 681, 866, 1149, 1177, 1663
CaiI CAGNNNCTG 4 cut(s) 89, 878, 1847, 1916
CciI TCATGA 1 cut(s) 1242
CfoI GCGC 1 cut(s) 64
Cfr10I RCCGGY 1 cut(s) 1159
Cfr13I GGNCC 6 cut(s) 55, 86, 989, 1060, 1526, 1740
CseI GACGC 3 cut(s) 168, 407, 1241
Csp6I GTAC 3 cut(s) 356, 1392, 1432
CspAI ACCGGT 1 cut(s) 1159
CviAII CATG 4 cut(s) 449, 585, 1243, 1294
CviQI GTAC 3 cut(s) 356, 1392, 1432
DdeI CTNAG 7 cut(s) 342, 684, 822, 1083, 1377, 1400, 1684
DinI GGCGCC 1 cut(s) 63
DpnI GATC 6 cut(s) 633, 762, 843, 1108, 1800, 1956
DpnII GATC 6 cut(s) 631, 760, 841, 1106, 1798, 1954
DraI TTTAAA 1 cut(s) 72
DriI GACNNNNNGTC 1 cut(s) 40
Eam1104I CTCTTC 4 cut(s) 669, 934, 1022, 1772
Eam1105I GACNNNNNGTC 1 cut(s) 40
EarI CTCTTC 4 cut(s) 669, 934, 1022, 1772
Ecl136II GAGCTC 1 cut(s) 1299
Eco130I CCWWGG 1 cut(s) 1594
Eco24I GRGCYC 3 cut(s) 245, 439, 1301
Eco31I GGTCTC 1 cut(s) 1831
Eco47I GGWCC 1 cut(s) 1526
Eco53kI GAGCTC 1 cut(s) 1299
Eco57I CTGAAG 1 cut(s) 1101
EcoICRI GAGCTC 1 cut(s) 1299
EcoNI CCTNNNNNAGG 2 cut(s) 1533, 1735
EcoO109I RGGNCCY 3 cut(s) 55, 86, 989
EcoRII CCWGG 4 cut(s) 1216, 1309, 1510, 1522
EcoT14I CCWWGG 1 cut(s) 1594
EcoT22I ATGCAT 2 cut(s) 1767, 1909
EcoT38I GRGCYC 3 cut(s) 245, 439, 1301
EgeI GGCGCC 1 cut(s) 63
EheI GGCGCC 1 cut(s) 63
ErhI CCWWGG 1 cut(s) 1594
FaeI CATG 4 cut(s) 452, 588, 1246, 1297
FaqI GGGAC 2 cut(s) 154, 1493
FatI CATG 4 cut(s) 448, 584, 1242, 1293
FokI GGATG 3 cut(s) 1624, 1774, 1898
FriOI GRGCYC 3 cut(s) 245, 439, 1301
FspBI CTAG 8 cut(s) 117, 137, 855, 1290, 1341, 1407, 1530, 1595
GlaI GCGC 1 cut(s) 63
GsuI CTGGAG 5 cut(s) 276, 1056, 1293, 1629, 1726
HaeII RGCGCY 1 cut(s) 65
HaeIII GGCC 8 cut(s) 56, 88, 564, 898, 991, 1062, 1360, 1741
HapII CCGG 6 cut(s) 59, 113, 359, 1104, 1160, 1608
HgaI GACGC 3 cut(s) 168, 407, 1241
HhaI GCGC 1 cut(s) 64
Hin1I GRCGYC 1 cut(s) 62
Hin1II CATG 4 cut(s) 452, 588, 1246, 1297
Hin6I GCGC 1 cut(s) 62
HinP1I GCGC 1 cut(s) 62
HindIII AAGCTT 3 cut(s) 482, 781, 866
HinfI GANTC 7 cut(s) 269, 302, 575, 614, 998, 1069, 1517
HpaII CCGG 6 cut(s) 59, 113, 359, 1104, 1160, 1608
HphI GGTGA 7 cut(s) 156, 311, 770, 810, 851, 1208, 1296
Hpy166II GTNNAC 2 cut(s) 1755, 1932
Hpy188III TCNNGA 3 cut(s) 477, 1165, 1243
Hpy8I GTNNAC 2 cut(s) 1755, 1932
Hpy99I CGWCG 2 cut(s) 82, 184
HpyAV CCTTC 6 cut(s) 554, 819, 1125, 1220, 1344, 1940
HpyCH4III ACNGT 7 cut(s) 194, 355, 456, 880, 982, 1225, 1977
HpyF10VI GCNNNNNNNGC 9 cut(s) 89, 182, 689, 746, 1395, 1465, 1474, 1829, 1913
HpyF3I CTNAG 7 cut(s) 342, 684, 822, 1083, 1377, 1400, 1684
Hsp92I GRCGYC 1 cut(s) 62
Hsp92II CATG 4 cut(s) 452, 588, 1246, 1297
HspAI GCGC 1 cut(s) 62
KasI GGCGCC 1 cut(s) 61
Kzo9I GATC 6 cut(s) 631, 760, 841, 1106, 1798, 1954
LguI GCTCTTC 2 cut(s) 669, 1772
LmnI GCTCC 2 cut(s) 362, 974
Lsp1109I GCAGC 9 cut(s) 163, 238, 760, 1030, 1261, 1480, 1567, 1570, 1900
LweI GCATC 9 cut(s) 421, 589, 1160, 1236, 1574, 1646, 1752, 1894, 1916
MaeI CTAG 8 cut(s) 117, 137, 855, 1290, 1341, 1407, 1530, 1595
MaeIII GTNAC 5 cut(s) 162, 857, 874, 1723, 1864
MalI GATC 6 cut(s) 633, 762, 843, 1108, 1800, 1956
MbiI CCGCTC 1 cut(s) 430
MboI GATC 6 cut(s) 631, 760, 841, 1106, 1798, 1954
MfeI CAATTG 1 cut(s) 1324
MflI RGATCY 1 cut(s) 1954
MhlI GDGCHC 5 cut(s) 245, 439, 719, 1301, 1825
MluCI AATT 7 cut(s) 158, 387, 652, 660, 1324, 1411, 1543
Mly113I GGCGCC 1 cut(s) 62
MlyI GAGTC 2 cut(s) 311, 1063
MmeI TCCRAC 4 cut(s) 872, 964, 1026, 1171
Mph1103I ATGCAT 2 cut(s) 1767, 1909
MseI TTAA 7 cut(s) 71, 711, 785, 882, 957, 1202, 1266
MspA1I CMGCKG 4 cut(s) 176, 505, 1082, 1913
MspCI CTTAAG 1 cut(s) 784
MspI CCGG 6 cut(s) 59, 113, 359, 1104, 1160, 1608
MspR9I CCNGG 8 cut(s) 59, 113, 360, 1218, 1311, 1512, 1524, 1609
MunI CAATTG 1 cut(s) 1324
Mva1269I GAATGC 1 cut(s) 1765
MvaI CCWGG 4 cut(s) 1218, 1311, 1512, 1524
MwoI GCNNNNNNNGC 9 cut(s) 89, 182, 689, 746, 1395, 1465, 1474, 1829, 1913
NarI GGCGCC 1 cut(s) 62
NciI CCSGG 4 cut(s) 59, 113, 360, 1609
NdeII GATC 6 cut(s) 631, 760, 841, 1106, 1798, 1954
NlaIII CATG 4 cut(s) 452, 588, 1246, 1297
NlaIV GGNNCC 4 cut(s) 57, 63, 1233, 1281
NmeAIII GCCGAG 1 cut(s) 1386
NmuCI GTSAC 3 cut(s) 162, 874, 1723
NsiI ATGCAT 2 cut(s) 1767, 1909
NspV TTCGAA 1 cut(s) 17
PagI TCATGA 1 cut(s) 1242
PaqCI CACCTGC 1 cut(s) 1550
PasI CCCWGGG 1 cut(s) 1511
PciSI GCTCTTC 2 cut(s) 669, 1772
PctI GAATGC 1 cut(s) 1765
PfeI GAWTC 5 cut(s) 269, 575, 614, 998, 1517
PflMI CCANNNNNTGG 1 cut(s) 1326
PfoI TCCNGGA 2 cut(s) 1309, 1522
PinAI ACCGGT 1 cut(s) 1159
PleI GAGTC 2 cut(s) 310, 1063
PluTI GGCGCC 1 cut(s) 65
PpsI GAGTC 2 cut(s) 310, 1063
Psp124BI GAGCTC 1 cut(s) 1301
Psp6I CCWGG 4 cut(s) 1216, 1309, 1510, 1522
PspGI CCWGG 4 cut(s) 1216, 1309, 1510, 1522
PspN4I GGNNCC 4 cut(s) 57, 63, 1233, 1281
PspPI GGNCC 6 cut(s) 55, 86, 989, 1060, 1526, 1740
PstI CTGCAG 1 cut(s) 1020
PstNI CAGNNNCTG 4 cut(s) 89, 878, 1847, 1916
PsuI RGATCY 1 cut(s) 1954
PvuII CAGCTG 3 cut(s) 505, 1082, 1913
RsaI GTAC 3 cut(s) 357, 1393, 1433
RsaNI GTAC 3 cut(s) 356, 1392, 1432
SacI GAGCTC 1 cut(s) 1301
SapI GCTCTTC 2 cut(s) 669, 1772
SaqAI TTAA 7 cut(s) 71, 711, 785, 882, 957, 1202, 1266
Sau3AI GATC 6 cut(s) 631, 760, 841, 1106, 1798, 1954
Sau96I GGNCC 6 cut(s) 55, 86, 989, 1060, 1526, 1740
SchI GAGTC 2 cut(s) 311, 1063
ScrFI CCNGG 8 cut(s) 59, 113, 360, 1218, 1311, 1512, 1524, 1609
SduI GDGCHC 5 cut(s) 245, 439, 719, 1301, 1825
SfaNI GCATC 9 cut(s) 421, 589, 1160, 1236, 1574, 1646, 1752, 1894, 1916
SfcI CTRYAG 2 cut(s) 978, 1016
SfoI GGCGCC 1 cut(s) 63
SfuI TTCGAA 1 cut(s) 17
SinI GGWCC 1 cut(s) 1526
SmlI CTYRAG 3 cut(s) 485, 784, 892
SmoI CTYRAG 3 cut(s) 485, 784, 892
SpeI ACTAGT 1 cut(s) 1340
Sse9I AATT 7 cut(s) 158, 387, 652, 660, 1324, 1411, 1543
SsiI CCGC 4 cut(s) 174, 430, 462, 1665
SspDI GGCGCC 1 cut(s) 61
SspMI CTAG 8 cut(s) 117, 137, 855, 1290, 1341, 1407, 1530, 1595
SstI GAGCTC 1 cut(s) 1301
StyD4I CCNGG 8 cut(s) 57, 111, 358, 1216, 1309, 1510, 1522, 1607
StyI CCWWGG 1 cut(s) 1594
TaaI ACNGT 7 cut(s) 194, 355, 456, 880, 982, 1225, 1977
TaqI TCGA 4 cut(s) 17, 245, 476, 719
TasI AATT 7 cut(s) 158, 387, 652, 660, 1324, 1411, 1543
TatI WGTACW 1 cut(s) 1391
TauI GCSGC 1 cut(s) 433
TfiI GAWTC 5 cut(s) 269, 575, 614, 998, 1517
Tru1I TTAA 7 cut(s) 71, 711, 785, 882, 957, 1202, 1266
Tru9I TTAA 7 cut(s) 71, 711, 785, 882, 957, 1202, 1266
TscAI CASTG 4 cut(s) 646, 883, 1230, 1789
TseFI GTSAC 3 cut(s) 162, 874, 1723
TseI GCWGC 9 cut(s) 176, 251, 773, 1018, 1249, 1468, 1580, 1583, 1913
Tsp45I GTSAC 3 cut(s) 162, 874, 1723
TspDTI ATGAA 6 cut(s) 234, 465, 573, 624, 755, 1790
TspGWI ACGGA 2 cut(s) 1929, 1983
TspRI CASTG 4 cut(s) 646, 883, 1230, 1789
Van91I CCANNNNNTGG 1 cut(s) 1326
Vha464I CTTAAG 1 cut(s) 784
VpaK11BI GGWCC 1 cut(s) 1526
XagI CCTNNNNNAGG 2 cut(s) 1533, 1735
XapI RAATTY 1 cut(s) 387
XcmI CCANNNNNNNNNTGG 1 cut(s) 1047
XmaJI CCTAGG 1 cut(s) 1594
XspI CTAG 8 cut(s) 117, 137, 855, 1290, 1341, 1407, 1530, 1595
Zsp2I ATGCAT 2 cut(s) 1767, 1909
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.