Rh4BG171600

Ubiquitin associated domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4B
OG0009633
Physical Location & Seq
Reverse (-)
30685719 .. 30688919
3201 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh4BG171600.1

Sequence Viewer

Length: 1995 bp
ATGTCTCCAGCGTCTTCGAAATCCAAATCAAAGGACAAGAAGTCCGGGAAAGAAGCCCCAGTGCCTGCTTTAAAGCCTTCGTCAGGGGCTGCTAATGCAGGGAGTGGGATTCCGGCTAGTGCATACAATCCGCTTCTAGGGACATTCCATACCCTTGAATTGTCACCGACATCGTCTGCATCGGCTGTTCAAAGTAATAGTCGATTTTGGAATATAGATGAAACAGATGACCATTCTGGGGGCTCGGTGGCTGCTGGAGCTGAGTATGATTCTGTTTCAAATAATGGTAGCTGGTCTGGTGAGTCGGAAGAACATAAAGATAAAACATCTAATCCTCCTGTTAAGCCAGAAACAGTACCGGGAGCTGACAACGACAAGCGAGAGAAAATCCGTCAGAAGAATGAGAGGAAGCATCAGCGTCAGAAAGAGCGGCGAGCCCAAGAGTTGCATGAACGATGTAGTGGTTATCTTATGTCGAGAAAACTTGAGGCACTTGCTCAACAGCTGGTGGCAATGGGTTTTGAACATGACGAGGCAACAGAGGCTCTCATACAGAATGAAGGCCGAGTAGAGGAATCAGTATCATGGCTTTTGGAAGATGCTTCAGATTCAGGTAAGCCAAGAGATCAAAACGTTGGTGGGAGTAATTTGAAAATTGACATATCAGAAGAGCTTGCTCAGATTGCAGATCTGGAAGTAAGGTTTAAGTGCTCGAAACAGGAGGTTGAAAGAGCTATTGTAGCCTGTGAGGGTGATCTTCATAAGGCTGCTGAAAGCTTAAGAGTAGCAAAGCAAGACCCACCTTCGATTTCACCTAAGCCAGAAGAAACTGGTGATCCTCCAACTGCTAGTAATGGCAAGGTTCCAGTCACTGTTAATCAGAACTTGAGGCCACAAGTAAAATCTAATCCTCCTACAATACAACAAAGAAGGGATGATAAGGACTTTAACTACACAAAACAAGGAGCTACAGTTGGAGGGCCTGTAGATTCTGCAAACAAACCTCTGCAGCCTTTGAAGAGAGGACAGCCAAAGTTGGAGTGGGCGAAAGGCCAACCGACTCCAGTTCCAGCTGATAGAAGGTGGTCAAGTGCCGGATCAAATCCTTCAGTTTCCTATTCTTTGGCGTCCCCTTTGCAGGCATCATCTCCACCGGTCAAGACGGAGGCACGTTATGTAGCTGTTGGAGGTGAGTTAAAGAACCTTCAGCCTGGAACAGTGAGGGAACCAGTTATCATGATGCAGCGTCCTCAATCTGTCAATACGAAGCAGATTCCTGCTACTAGCATGAGCTCATCACCTCCTGGAACTGCCACCAATTGGTATCCTTCTTCTAGTGTCGAACTTATGAGGTCGAGCGGGTTTTTGCCTCAGATTCCAAGCAGTACAAGCCTCAGCACTAGCAATTTGGGCTCAAATCAGATGTACCACCAGTTTCAGTATCAACAGCAGCAACAGCAGCAGCAACAACAGCAACAGCAACATCAGCATTTTATTCCTGGTGGCCCTGGGGATTCTCCTGGAACAATTCGAGGGAATAATTTGTGGAATAGAGCAGGTGTATCTCAAACACTTGCTGCTGCTTCCTCCCTCGGACTATTCTCCGGGTTGGGGTCAGCTGGCTCATCAGGGGCATCTTCTCCAGTAGATTGGAGTGCTGGCGGTGGCTCATTTAGGCACTTAGATTACACCAACATAGACTGGAGTTTGGATAGAGGTGTGACGCCCTCTACCAGACCTAATGGGTTGTGGACAGGGATGCCTTCTGCTATGAAGGGCAATACCAACTTTTATGATTCAAAAACTACTGGTTTGGGTGCTCAATCTGTAATGAGACCGGCTTCCTCGAACATGAATGGTGTTACCCTTGTGGGTTTGCAGGATGGAGGTGCTAATGCTGATGCATCAGCTGCTGGTTCCGGGGAGTGGACTTCTCCGTTTGAAGGAGTGGATCTCTTTAGGATACCCAGACAGTTTGTTTCTTCTTCTCCATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

664

Amino Acids

71.03

Weight (kDa)

7.19

Isoelectric Point (pI)

55.3

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
UBA_7 PF22562 163 - 205 4.9e-07 UBA-like domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1547
Acc36I ACCTGC 1 cut(s) 1547
AccB7I CCANNNNNTGG 1 cut(s) 1320
AccBSI CCGCTC 2 cut(s) 430, 1359
AciI CCGC 4 cut(s) 131, 430, 1359, 1662
AclI AACGTT 1 cut(s) 633
AclWI GGATC 3 cut(s) 830, 1105, 1959
AcuI CTGAAG 3 cut(s) 588, 1092, 1190
AcyI GRCGYC 2 cut(s) 1127, 1724
AfaI GTAC 3 cut(s) 357, 1387, 1427
AfiI CCNNNNNNNGG 9 cut(s) 83, 137, 238, 571, 1138, 1320, 1611, 1926, 1943
AflII CTTAAG 1 cut(s) 778
AgeI ACCGGT 1 cut(s) 1153
AgsI TTSAA 9 cut(s) 158, 191, 279, 524, 652, 728, 1018, 1800, 1943
AhdI GACNNNNNGTC 1 cut(s) 40
AjnI CCWGG 5 cut(s) 1210, 1303, 1498, 1507, 1519
Alw21I GWGCWC 3 cut(s) 713, 1295, 1822
Alw26I GTCTC 2 cut(s) 9, 1828
AlwI GGATC 3 cut(s) 830, 1105, 1959
AlwNI CAGNNNCTG 4 cut(s) 65, 89, 872, 1913
AoxI GGCC 5 cut(s) 562, 890, 980, 1051, 1504
ArsI GACNNNNNNTTYG 2 cut(s) 184, 216
AsiGI ACCGGT 1 cut(s) 1153
AspS9I GGNCC 2 cut(s) 980, 1505
AsuC2I CCSGG 4 cut(s) 46, 360, 1606, 1921
AsuHPI GGTGA 7 cut(s) 156, 311, 764, 804, 845, 1202, 1290
AsuII TTCGAA 1 cut(s) 17
BanII GRGCYC 4 cut(s) 245, 439, 1295, 1415
BbsI GAAGAC 1 cut(s) 6
Bbv12I GWGCWC 3 cut(s) 713, 1295, 1822
BbvCI CCTCAGC 1 cut(s) 1394
BccI CCATC 1 cut(s) 1877
BciT130I CCWGG 5 cut(s) 1212, 1305, 1500, 1509, 1521
BciVI GTATCC 2 cut(s) 1335, 1956
BcnI CCSGG 4 cut(s) 46, 360, 1606, 1921
BcoDI GTCTC 2 cut(s) 9, 1828
BfaI CTAG 6 cut(s) 117, 137, 849, 1284, 1335, 1401
BfmI CTRYAG 3 cut(s) 969, 984, 1007
BfrI CTTAAG 1 cut(s) 778
BfuAI ACCTGC 1 cut(s) 1547
BfuI GTATCC 2 cut(s) 1335, 1956
BglII AGATCT 1 cut(s) 688
Bme1390I CCNGG 9 cut(s) 46, 360, 1212, 1305, 1500, 1509, 1521, 1606, 1921
BmeRI GACNNNNNGTC 1 cut(s) 40
BmgT120I GGNCC 2 cut(s) 980, 1505
BmiI GGNNCC 3 cut(s) 864, 1227, 1918
BmrFI CCNGG 9 cut(s) 46, 360, 1212, 1305, 1500, 1509, 1521, 1606, 1921
BmrI ACTGGG 1 cut(s) 53
BmsI GCATC 9 cut(s) 188, 421, 589, 1151, 1230, 1643, 1749, 1891, 1913
BmuI ACTGGG 1 cut(s) 53
BpiI GAAGAC 1 cut(s) 6
BplI GAGNNNNNCTC 2 cut(s) 1938, 1970
BpmI CTGGAG 4 cut(s) 276, 1047, 1626, 1723
Bpu10I CCTNAGC 2 cut(s) 816, 1394
Bpu14I TTCGAA 1 cut(s) 17
BpuEI CTTGAG 2 cut(s) 506, 907
BpuMI CCSGG 4 cut(s) 46, 360, 1606, 1921
BsaHI GRCGYC 2 cut(s) 1127, 1724
BsaI GGTCTC 1 cut(s) 1828
BsaJI CCNNGG 4 cut(s) 1507, 1508, 1591, 1920
BsaWI WCCGGW 1 cut(s) 1153
BsaXI ACNNNNNCTCC 4 cut(s) 957, 969, 987, 999
Bsc4I CCNNNNNNNGG 9 cut(s) 83, 137, 238, 571, 1138, 1320, 1611, 1926, 1943
Bse118I RCCGGY 2 cut(s) 1153, 1837
Bse1I ACTGG 9 cut(s) 59, 835, 866, 1064, 1229, 1432, 1643, 1706, 1813
Bse3DI GCAATG 1 cut(s) 519
BseBI CCWGG 5 cut(s) 1212, 1305, 1500, 1509, 1521
BseDI CCNNGG 4 cut(s) 1507, 1508, 1591, 1920
BseGI GGATG 3 cut(s) 940, 1764, 1888
BseLI CCNNNNNNNGG 9 cut(s) 83, 137, 238, 571, 1138, 1320, 1611, 1926, 1943
BseMI GCAATG 1 cut(s) 519
BseMII CTCAG 4 cut(s) 252, 692, 1385, 1408
BseNI ACTGG 9 cut(s) 59, 835, 866, 1064, 1229, 1432, 1643, 1706, 1813
BshFI GGCC 5 cut(s) 564, 892, 982, 1053, 1506
BshTI ACCGGT 1 cut(s) 1153
BsiHKAI GWGCWC 3 cut(s) 713, 1295, 1822
BsiSI CCGG 8 cut(s) 45, 113, 359, 1095, 1154, 1605, 1838, 1920
BslFI GGGAC 2 cut(s) 154, 1114
BslI CCNNNNNNNGG 9 cut(s) 83, 137, 238, 571, 1138, 1320, 1611, 1926, 1943
BsmAI GTCTC 2 cut(s) 9, 1828
BsmFI GGGAC 2 cut(s) 154, 1114
BsnI GGCC 5 cut(s) 564, 892, 982, 1053, 1506
Bso31I GGTCTC 1 cut(s) 1828
Bsp119I TTCGAA 1 cut(s) 17
Bsp1286I GDGCHC 6 cut(s) 245, 439, 713, 1295, 1415, 1822
Bsp143I GATC 6 cut(s) 625, 688, 754, 835, 1097, 1951
BspACI CCGC 4 cut(s) 131, 430, 1359, 1662
BspANI GGCC 5 cut(s) 564, 892, 982, 1053, 1506
BspCNI CTCAG 4 cut(s) 253, 691, 1384, 1407
BspHI TCATGA 1 cut(s) 1236
BspLI GGNNCC 3 cut(s) 864, 1227, 1918
BspMAI CTGCAG 1 cut(s) 1011
BspMI ACCTGC 1 cut(s) 1547
BspPI GGATC 3 cut(s) 830, 1105, 1959
BspQI GCTCTTC 1 cut(s) 663
BspT104I TTCGAA 1 cut(s) 17
BspTI CTTAAG 1 cut(s) 778
BspTNI GGTCTC 1 cut(s) 1828
BsrBI CCGCTC 2 cut(s) 430, 1359
BsrDI GCAATG 1 cut(s) 519
BsrFI RCCGGY 2 cut(s) 1153, 1837
BsrI ACTGG 9 cut(s) 59, 835, 866, 1064, 1229, 1432, 1643, 1706, 1813
BssAI RCCGGY 2 cut(s) 1153, 1837
BssECI CCNNGG 4 cut(s) 1507, 1508, 1591, 1920
BssMI GATC 6 cut(s) 625, 688, 754, 835, 1097, 1951
BssNI GRCGYC 2 cut(s) 1127, 1724
Bst2UI CCWGG 5 cut(s) 1212, 1305, 1500, 1509, 1521
Bst4CI ACNGT 5 cut(s) 355, 874, 973, 1219, 1974
Bst6I CTCTTC 2 cut(s) 663, 1013
BstACI GRCGYC 2 cut(s) 1127, 1724
BstAFI CTTAAG 1 cut(s) 778
BstAPI GCANNNNNTGC 1 cut(s) 1910
BstBI TTCGAA 1 cut(s) 17
BstC8I GCNNGC 6 cut(s) 66, 435, 675, 1140, 1621, 1660
BstDEI CTNAG 6 cut(s) 261, 678, 816, 1371, 1394, 1681
BstENI CCTNNNNNAGG 1 cut(s) 81
BstF5I GGATG 3 cut(s) 940, 1764, 1888
BstKTI GATC 6 cut(s) 628, 691, 757, 838, 1100, 1954
BstMAI GTCTC 2 cut(s) 9, 1828
BstMBI GATC 6 cut(s) 625, 688, 754, 835, 1097, 1951
BstNI CCWGG 5 cut(s) 1212, 1305, 1500, 1509, 1521
BstSCI CCNGG 9 cut(s) 44, 358, 1210, 1303, 1498, 1507, 1519, 1604, 1919
BstSFI CTRYAG 3 cut(s) 969, 984, 1007
BstV2I GAAGAC 1 cut(s) 6
BstX2I RGATCY 2 cut(s) 688, 1951
BstXI CCANNNNNNTGG 1 cut(s) 1650
BstYI RGATCY 2 cut(s) 688, 1951
BsuI GTATCC 2 cut(s) 1335, 1956
BsuRI GGCC 5 cut(s) 564, 892, 982, 1053, 1506
BtsCI GGATG 3 cut(s) 940, 1764, 1888
BtsIMutI CAGTG 3 cut(s) 66, 870, 1224
BveI ACCTGC 1 cut(s) 1547
Cac8I GCNNGC 6 cut(s) 66, 435, 675, 1140, 1621, 1660
CaiI CAGNNNCTG 4 cut(s) 65, 89, 872, 1913
CciI TCATGA 1 cut(s) 1236
Cfr10I RCCGGY 2 cut(s) 1153, 1837
Cfr13I GGNCC 2 cut(s) 980, 1505
CseI GACGC 4 cut(s) 407, 1116, 1235, 1732
Csp6I GTAC 3 cut(s) 356, 1386, 1426
CspAI ACCGGT 1 cut(s) 1153
CviAII CATG 6 cut(s) 449, 527, 585, 1237, 1288, 1852
CviQI GTAC 3 cut(s) 356, 1386, 1426
DdeI CTNAG 6 cut(s) 261, 678, 816, 1371, 1394, 1681
DpnI GATC 6 cut(s) 627, 690, 756, 837, 1099, 1953
DpnII GATC 6 cut(s) 625, 688, 754, 835, 1097, 1951
DraI TTTAAA 1 cut(s) 72
DriI GACNNNNNGTC 1 cut(s) 40
Eam1104I CTCTTC 2 cut(s) 663, 1013
Eam1105I GACNNNNNGTC 1 cut(s) 40
EarI CTCTTC 2 cut(s) 663, 1013
Ecl136II GAGCTC 1 cut(s) 1293
Eco24I GRGCYC 4 cut(s) 245, 439, 1295, 1415
Eco31I GGTCTC 1 cut(s) 1828
Eco53kI GAGCTC 1 cut(s) 1293
Eco57I CTGAAG 3 cut(s) 588, 1092, 1190
EcoICRI GAGCTC 1 cut(s) 1293
EcoNI CCTNNNNNAGG 1 cut(s) 81
EcoO109I RGGNCCY 1 cut(s) 980
EcoRII CCWGG 5 cut(s) 1210, 1303, 1498, 1507, 1519
EcoT22I ATGCAT 1 cut(s) 1906
EcoT38I GRGCYC 4 cut(s) 245, 439, 1295, 1415
FaeI CATG 6 cut(s) 452, 530, 588, 1240, 1291, 1855
FaqI GGGAC 2 cut(s) 154, 1114
FatI CATG 6 cut(s) 448, 526, 584, 1236, 1287, 1851
FauI CCCGC 1 cut(s) 1352
FokI GGATG 3 cut(s) 947, 1771, 1895
FriOI GRGCYC 4 cut(s) 245, 439, 1295, 1415
FspBI CTAG 6 cut(s) 117, 137, 849, 1284, 1335, 1401
GsuI CTGGAG 4 cut(s) 276, 1047, 1626, 1723
HaeIII GGCC 5 cut(s) 564, 892, 982, 1053, 1506
HapII CCGG 8 cut(s) 45, 113, 359, 1095, 1154, 1605, 1838, 1920
HgaI GACGC 4 cut(s) 407, 1116, 1235, 1732
Hin1I GRCGYC 2 cut(s) 1127, 1724
Hin1II CATG 6 cut(s) 452, 530, 588, 1240, 1291, 1855
HindIII AAGCTT 1 cut(s) 775
HpaII CCGG 8 cut(s) 45, 113, 359, 1095, 1154, 1605, 1838, 1920
HphI GGTGA 7 cut(s) 156, 311, 764, 804, 845, 1202, 1290
Hpy166II GTNNAC 2 cut(s) 1752, 1929
Hpy188III TCNNGA 4 cut(s) 477, 692, 1159, 1237
Hpy8I GTNNAC 2 cut(s) 1752, 1929
HpyCH4III ACNGT 5 cut(s) 355, 874, 973, 1219, 1974
HpyCH4IV ACGT 2 cut(s) 633, 1171
HpyF3I CTNAG 6 cut(s) 261, 678, 816, 1371, 1394, 1681
HpySE526I ACGT 2 cut(s) 633, 1171
Hsp92I GRCGYC 2 cut(s) 1127, 1724
Hsp92II CATG 6 cut(s) 452, 530, 588, 1240, 1291, 1855
Kzo9I GATC 6 cut(s) 625, 688, 754, 835, 1097, 1951
LguI GCTCTTC 1 cut(s) 663
LmnI GCTCC 3 cut(s) 257, 362, 965
LweI GCATC 9 cut(s) 188, 421, 589, 1151, 1230, 1643, 1749, 1891, 1913
MaeI CTAG 6 cut(s) 117, 137, 849, 1284, 1335, 1401
MaeII ACGT 2 cut(s) 633, 1171
MaeIII GTNAC 4 cut(s) 162, 868, 1720, 1861
MalI GATC 6 cut(s) 627, 690, 756, 837, 1099, 1953
MbiI CCGCTC 2 cut(s) 430, 1359
MboI GATC 6 cut(s) 625, 688, 754, 835, 1097, 1951
MfeI CAATTG 1 cut(s) 1318
MflI RGATCY 2 cut(s) 688, 1951
MhlI GDGCHC 6 cut(s) 245, 439, 713, 1295, 1415, 1822
MluCI AATT 7 cut(s) 158, 646, 654, 1318, 1405, 1527, 1540
MlyI GAGTC 2 cut(s) 311, 1054
MmeI TCCRAC 5 cut(s) 285, 866, 955, 1017, 1165
Mph1103I ATGCAT 1 cut(s) 1906
MseI TTAA 7 cut(s) 71, 342, 705, 779, 876, 948, 1196
MspA1I CMGCKG 4 cut(s) 505, 1073, 1619, 1910
MspCI CTTAAG 1 cut(s) 778
MspI CCGG 8 cut(s) 45, 113, 359, 1095, 1154, 1605, 1838, 1920
MspR9I CCNGG 9 cut(s) 46, 360, 1212, 1305, 1500, 1509, 1521, 1606, 1921
MunI CAATTG 1 cut(s) 1318
MvaI CCWGG 5 cut(s) 1212, 1305, 1500, 1509, 1521
NciI CCSGG 4 cut(s) 46, 360, 1606, 1921
NdeII GATC 6 cut(s) 625, 688, 754, 835, 1097, 1951
NlaIII CATG 6 cut(s) 452, 530, 588, 1240, 1291, 1855
NlaIV GGNNCC 3 cut(s) 864, 1227, 1918
NmeAIII GCCGAG 1 cut(s) 590
NmuCI GTSAC 3 cut(s) 162, 868, 1720
NsiI ATGCAT 1 cut(s) 1906
NspV TTCGAA 1 cut(s) 17
PagI TCATGA 1 cut(s) 1236
PaqCI CACCTGC 1 cut(s) 1547
PasI CCCWGGG 1 cut(s) 1508
PciSI GCTCTTC 1 cut(s) 663
PfeI GAWTC 9 cut(s) 109, 269, 575, 608, 989, 1273, 1375, 1514, 1796
PflFI GACNNNGTC 1 cut(s) 172
PflMI CCANNNNNTGG 1 cut(s) 1320
PfoI TCCNGGA 3 cut(s) 44, 1303, 1519
PinAI ACCGGT 1 cut(s) 1153
PleI GAGTC 2 cut(s) 310, 1054
PpsI GAGTC 2 cut(s) 310, 1054
Psp124BI GAGCTC 1 cut(s) 1295
Psp1406I AACGTT 1 cut(s) 633
Psp6I CCWGG 5 cut(s) 1210, 1303, 1498, 1507, 1519
PspGI CCWGG 5 cut(s) 1210, 1303, 1498, 1507, 1519
PspN4I GGNNCC 3 cut(s) 864, 1227, 1918
PspPI GGNCC 2 cut(s) 980, 1505
PstI CTGCAG 1 cut(s) 1011
PstNI CAGNNNCTG 4 cut(s) 65, 89, 872, 1913
PsuI RGATCY 2 cut(s) 688, 1951
PsyI GACNNNGTC 1 cut(s) 172
PvuII CAGCTG 4 cut(s) 505, 1073, 1619, 1910
RsaI GTAC 3 cut(s) 357, 1387, 1427
RsaNI GTAC 3 cut(s) 356, 1386, 1426
SacI GAGCTC 1 cut(s) 1295
SapI GCTCTTC 1 cut(s) 663
SaqAI TTAA 7 cut(s) 71, 342, 705, 779, 876, 948, 1196
Sau3AI GATC 6 cut(s) 625, 688, 754, 835, 1097, 1951
Sau96I GGNCC 2 cut(s) 980, 1505
SchI GAGTC 2 cut(s) 311, 1054
ScrFI CCNGG 9 cut(s) 46, 360, 1212, 1305, 1500, 1509, 1521, 1606, 1921
SduI GDGCHC 6 cut(s) 245, 439, 713, 1295, 1415, 1822
SfaNI GCATC 9 cut(s) 188, 421, 589, 1151, 1230, 1643, 1749, 1891, 1913
SfcI CTRYAG 3 cut(s) 969, 984, 1007
SfuI TTCGAA 1 cut(s) 17
SmlI CTYRAG 3 cut(s) 485, 778, 886
SmoI CTYRAG 3 cut(s) 485, 778, 886
Sse9I AATT 7 cut(s) 158, 646, 654, 1318, 1405, 1527, 1540
SsiI CCGC 4 cut(s) 131, 430, 1359, 1662
SspMI CTAG 6 cut(s) 117, 137, 849, 1284, 1335, 1401
SstI GAGCTC 1 cut(s) 1295
StyD4I CCNGG 9 cut(s) 44, 358, 1210, 1303, 1498, 1507, 1519, 1604, 1919
TaaI ACNGT 5 cut(s) 355, 874, 973, 1219, 1974
TaiI ACGT 2 cut(s) 636, 1174
TaqI TCGA 9 cut(s) 17, 202, 476, 713, 806, 1341, 1355, 1531, 1847
TasI AATT 7 cut(s) 158, 646, 654, 1318, 1405, 1527, 1540
TatI WGTACW 1 cut(s) 1385
TauI GCSGC 1 cut(s) 433
TfiI GAWTC 9 cut(s) 109, 269, 575, 608, 989, 1273, 1375, 1514, 1796
Tru1I TTAA 7 cut(s) 71, 342, 705, 779, 876, 948, 1196
Tru9I TTAA 7 cut(s) 71, 342, 705, 779, 876, 948, 1196
TscAI CASTG 3 cut(s) 66, 877, 1224
TseFI GTSAC 3 cut(s) 162, 868, 1720
Tsp45I GTSAC 3 cut(s) 162, 868, 1720
TspDTI ATGAA 6 cut(s) 234, 465, 573, 749, 1787, 1868
TspGWI ACGGA 3 cut(s) 380, 1178, 1926
TspRI CASTG 3 cut(s) 66, 877, 1224
Tth111I GACNNNGTC 1 cut(s) 172
Van91I CCANNNNNTGG 1 cut(s) 1320
Vha464I CTTAAG 1 cut(s) 778
XagI CCTNNNNNAGG 1 cut(s) 81
XcmI CCANNNNNNNNNTGG 1 cut(s) 1038
XspI CTAG 6 cut(s) 117, 137, 849, 1284, 1335, 1401
Zsp2I ATGCAT 1 cut(s) 1906
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.