RLG00000008306

Ubiquitin associated domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr2
OG0009633
Physical Location & Seq
Forward (+)
28689195 .. 28691713
2519 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000008306

Sequence Viewer

Length: 1971 bp
ATGGGATTGAATTCCTTCCTCTCTTCTCTGATTTGGGTTTGTAACATGTCTCCAGCGTCTTCGAAATCCAAATCAAAGGACAAGAAGTCGGGGAAAGAAGCCCCGGTGCCTGCTTTAAAGCCTTCGTCAGGGGCTGCTAATGCAGGGAGTGGGATTCCGGCTAGTGCATATAATCCGCTTCTAGGGACATTCCATTCCCTTGAATTGTCACCGACATCGTCTGCGTCGGCTGTTCACAGTAATAGTCGATTTCGGAATATAGATGAAACAGATGACCATTCTGGGGGCTCGGTGGCTGCGGGAGCTGAGTATGATTCTGTTTCAAATAATGGTAGCTGGTCTGGTGAGTCGGAAGAACATAAAGACAAAACATCTAATCCTCCTGTTAAGCCAGAAACAGTACCGGGAGCTGACAACGACAAGCGAGAGAAAATCCGTCAGAAGAATGAGAGGAAGCATCAGCGTCAGAAAGAGCGGCGAGCCCAAGAGTTGCATGAACGATGTAGTGGTTATCTTATGTCGAGAAAACTTGAGGCACTTGCTCAACAGCTGGTGGCAATGGGTATTGAACATGATGAGGCAACAGAGGCTCTCATACAGAATGAAGGCCGAGTAGAGGAATCAGTATCATGGATTTTTGAAGGTGCTTCAGATTCAGATTCAGATCTGGAAGTAAGGTTTAAGTGCTCGAAACAGGAAGTGGAAAGAGCTATCGTAGCCTGTGAGGGTGATCTTCATAAGGCTGCTGAAAGCTTAAGAGTAGCAAAGCAAGACCCACCTTCGATTTCACCTAAGCCAGAAGAAACTGGTGATCCTCCAACTGCTAGTAATGGCAAGGTTCCAGTCACTGTTAATCAGAACTTGAGGCCACAAGTAAAATCTAATCCTCCTACAATACAACAAAGAAGGGATGATAAGGACTTTAACTACACAAAACAAGGAGCTACAGTTGGAGGGCCTGTAGATTCTGCAAACAAACCTCTGCAGCCTTTGAAGAGAGGACAGCCGAAGTTGGAGTGGGCGAAAGGCCAACCGACTCCAGTTCCAGCTGATAGAAGGTGGTCAAGTGCCGGATCAAATCCTTCAGTTTCCTATTCCTTGGCGTCCCCATTGCAGGCATCATCTCCACCGGTCAAGACGGAGGCACGTTATGTAGCTGTTGGAGGTGAGATAAAGAACCTTCAGCCTGGAACAGTGAGGGAACCAGTTATCATGATGCAGCGTCCTCAATCTATCAATACGAAGCAGGTTCCTGCTACGAGCATGAGCTCATCACCTCCTGGAACTGCCACCAATTGGTATCCTTCTACTAGTGTCGAACTTATGAGGTCGAGCGGGTTTTTGCCTCAGATTCCAAGCAGTACGAGCCTCAGCACTAGCAATTTGGGCTCAAATCAGATGTACCACCAGTTTCAGTATCAACAGCAGCAACAGCAACAGCAGCAGCAGCAACAGCAACATCATCATTTTATTCCTGGTGGCCCTGGGGATTCTCCTGGAACAATTCGAGGGAATAATTTGTGGAATAGAGCAGGTGCATCTCAAACACTTGCTGCTGCTTCCTCCCTCGGACTATTCTCCGCGTTGGGGTCAGCTGGCTCATCAGGGGCATCTTCTCCAGTAGATTGGAGTGCTGGCGGTGGCTCATTTAGGCACTTGGATTACACCAACATAGACTGGAGTTTGGATAGAGGTGTGACGCCCTCTACCAGACCTAATGGGTTGTGGACAGGGATGCCTTCTGCTATGAAGGGCAATACCAACTTTTATGATTCAAAAACTACTGGTTTGGGTGCTCAATCTGCAATGAGACCGGCTTCCTCTAACATGAATGGTGTTACCCATGTGGGTTTACAGGATGGAGGTGCTAATGCTGATGCATCAGCTGCTGGTTCCGGGGAGTGGACTTCTCCGTTTGAAGGAGTGGATCTCTTTAGGATACCCAGACAGTTTGTTTCTTCTTCTCCATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

657

Amino Acids

70.17

Weight (kDa)

8.17

Isoelectric Point (pI)

55.38

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
UBA_7 PF22562 178 - 222 1.5e-06 UBA-like domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1523
Acc36I ACCTGC 2 cut(s) 1237, 1523
AccB1I GGYRCC 1 cut(s) 106
AccB7I CCANNNNNTGG 1 cut(s) 1296
AccBSI CCGCTC 2 cut(s) 475, 1335
AccII CGCG 1 cut(s) 1583
AciI CCGC 6 cut(s) 176, 299, 475, 1335, 1581, 1638
AclWI GGATC 3 cut(s) 806, 1081, 1935
AcsI RAATTY 1 cut(s) 10
AcuI CTGAAG 3 cut(s) 633, 1068, 1166
AcyI GRCGYC 2 cut(s) 1103, 1700
AfaI GTAC 3 cut(s) 402, 1363, 1403
AfiI CCNNNNNNNGG 9 cut(s) 128, 182, 283, 616, 1114, 1296, 1587, 1902, 1919
AflII CTTAAG 1 cut(s) 754
AflIII ACRYGT 1 cut(s) 45
AgeI ACCGGT 1 cut(s) 1129
AgsI TTSAA 8 cut(s) 10, 203, 324, 569, 641, 994, 1776, 1919
AhdI GACNNNNNGTC 1 cut(s) 85
AhlI ACTAGT 1 cut(s) 1310
AjnI CCWGG 5 cut(s) 1186, 1279, 1474, 1483, 1495
Alw21I GWGCWC 3 cut(s) 689, 1271, 1798
Alw26I GTCTC 2 cut(s) 54, 1804
AlwI GGATC 3 cut(s) 806, 1081, 1935
AlwNI CAGNNNCTG 3 cut(s) 134, 848, 1889
AoxI GGCC 5 cut(s) 607, 866, 956, 1027, 1480
ApoI RAATTY 1 cut(s) 10
AsiGI ACCGGT 1 cut(s) 1129
Asp700I GAANNNNTTC 1 cut(s) 14
AspS9I GGNCC 2 cut(s) 956, 1481
AsuC2I CCSGG 3 cut(s) 104, 405, 1897
AsuHPI GGTGA 7 cut(s) 201, 356, 740, 780, 821, 1178, 1266
AsuII TTCGAA 1 cut(s) 62
BanI GGYRCC 1 cut(s) 106
BanII GRGCYC 4 cut(s) 290, 484, 1271, 1391
BbsI GAAGAC 1 cut(s) 51
Bbv12I GWGCWC 3 cut(s) 689, 1271, 1798
BbvCI CCTCAGC 1 cut(s) 1370
BccI CCATC 1 cut(s) 1853
BciT130I CCWGG 5 cut(s) 1188, 1281, 1476, 1485, 1497
BciVI GTATCC 2 cut(s) 1311, 1932
BcnI CCSGG 3 cut(s) 104, 405, 1897
BcoDI GTCTC 2 cut(s) 54, 1804
BcuI ACTAGT 1 cut(s) 1310
BfaI CTAG 5 cut(s) 162, 182, 825, 1311, 1377
BfmI CTRYAG 3 cut(s) 945, 960, 983
BfrI CTTAAG 1 cut(s) 754
BfuAI ACCTGC 2 cut(s) 1237, 1523
BfuI GTATCC 2 cut(s) 1311, 1932
BglII AGATCT 1 cut(s) 664
Bme1390I CCNGG 8 cut(s) 104, 405, 1188, 1281, 1476, 1485, 1497, 1897
BmeRI GACNNNNNGTC 1 cut(s) 85
BmgT120I GGNCC 2 cut(s) 956, 1481
BmiI GGNNCC 5 cut(s) 108, 840, 1203, 1251, 1894
BmrFI CCNGG 8 cut(s) 104, 405, 1188, 1281, 1476, 1485, 1497, 1897
BmsI GCATC 8 cut(s) 466, 1127, 1206, 1547, 1619, 1725, 1867, 1889
BpiI GAAGAC 1 cut(s) 51
BplI GAGNNNNNCTC 2 cut(s) 1914, 1946
BpmI CTGGAG 4 cut(s) 36, 1023, 1602, 1699
Bpu10I CCTNAGC 2 cut(s) 792, 1370
Bpu14I TTCGAA 1 cut(s) 62
BpuEI CTTGAG 2 cut(s) 551, 883
BpuMI CCSGG 3 cut(s) 104, 405, 1897
BsaBI GATNNNNATC 1 cut(s) 663
BsaHI GRCGYC 2 cut(s) 1103, 1700
BsaI GGTCTC 1 cut(s) 1804
BsaJI CCNNGG 6 cut(s) 102, 1098, 1483, 1484, 1567, 1896
BsaWI WCCGGW 1 cut(s) 1129
BsaXI ACNNNNNCTCC 4 cut(s) 933, 945, 963, 975
Bsc4I CCNNNNNNNGG 9 cut(s) 128, 182, 283, 616, 1114, 1296, 1587, 1902, 1919
Bse118I RCCGGY 2 cut(s) 1129, 1813
Bse1I ACTGG 8 cut(s) 811, 842, 1040, 1205, 1408, 1619, 1682, 1789
Bse3DI GCAATG 3 cut(s) 564, 1109, 1812
Bse8I GATNNNNATC 1 cut(s) 663
BseBI CCWGG 5 cut(s) 1188, 1281, 1476, 1485, 1497
BseDI CCNNGG 6 cut(s) 102, 1098, 1483, 1484, 1567, 1896
BseGI GGATG 3 cut(s) 916, 1740, 1864
BseJI GATNNNNATC 1 cut(s) 663
BseLI CCNNNNNNNGG 9 cut(s) 128, 182, 283, 616, 1114, 1296, 1587, 1902, 1919
BseMI GCAATG 3 cut(s) 564, 1109, 1812
BseMII CTCAG 3 cut(s) 297, 1361, 1384
BseNI ACTGG 8 cut(s) 811, 842, 1040, 1205, 1408, 1619, 1682, 1789
Bsh1236I CGCG 1 cut(s) 1583
BshFI GGCC 5 cut(s) 609, 868, 958, 1029, 1482
BshNI GGYRCC 1 cut(s) 106
BshTI ACCGGT 1 cut(s) 1129
BsiHKAI GWGCWC 3 cut(s) 689, 1271, 1798
BsiSI CCGG 7 cut(s) 104, 158, 404, 1071, 1130, 1814, 1896
BslFI GGGAC 2 cut(s) 199, 1090
BslI CCNNNNNNNGG 9 cut(s) 128, 182, 283, 616, 1114, 1296, 1587, 1902, 1919
BsmAI GTCTC 2 cut(s) 54, 1804
BsmFI GGGAC 2 cut(s) 199, 1090
BsnI GGCC 5 cut(s) 609, 868, 958, 1029, 1482
Bso31I GGTCTC 1 cut(s) 1804
Bsp119I TTCGAA 1 cut(s) 62
Bsp1286I GDGCHC 6 cut(s) 290, 484, 689, 1271, 1391, 1798
Bsp143I GATC 5 cut(s) 664, 730, 811, 1073, 1927
BspACI CCGC 6 cut(s) 176, 299, 475, 1335, 1581, 1638
BspANI GGCC 5 cut(s) 609, 868, 958, 1029, 1482
BspCNI CTCAG 3 cut(s) 298, 1360, 1383
BspFNI CGCG 1 cut(s) 1583
BspHI TCATGA 1 cut(s) 1212
BspLI GGNNCC 5 cut(s) 108, 840, 1203, 1251, 1894
BspMAI CTGCAG 1 cut(s) 987
BspMI ACCTGC 2 cut(s) 1237, 1523
BspPI GGATC 3 cut(s) 806, 1081, 1935
BspT104I TTCGAA 1 cut(s) 62
BspT107I GGYRCC 1 cut(s) 106
BspTI CTTAAG 1 cut(s) 754
BspTNI GGTCTC 1 cut(s) 1804
BsrBI CCGCTC 2 cut(s) 475, 1335
BsrDI GCAATG 3 cut(s) 564, 1109, 1812
BsrFI RCCGGY 2 cut(s) 1129, 1813
BsrI ACTGG 8 cut(s) 811, 842, 1040, 1205, 1408, 1619, 1682, 1789
BssAI RCCGGY 2 cut(s) 1129, 1813
BssECI CCNNGG 6 cut(s) 102, 1098, 1483, 1484, 1567, 1896
BssMI GATC 5 cut(s) 664, 730, 811, 1073, 1927
BssNI GRCGYC 2 cut(s) 1103, 1700
BssT1I CCWWGG 1 cut(s) 1098
Bst2UI CCWGG 5 cut(s) 1188, 1281, 1476, 1485, 1497
Bst4CI ACNGT 6 cut(s) 239, 400, 850, 949, 1195, 1950
Bst6I CTCTTC 2 cut(s) 28, 989
BstACI GRCGYC 2 cut(s) 1103, 1700
BstAFI CTTAAG 1 cut(s) 754
BstAPI GCANNNNNTGC 1 cut(s) 1886
BstBI TTCGAA 1 cut(s) 62
BstC8I GCNNGC 5 cut(s) 111, 480, 1116, 1597, 1636
BstDEI CTNAG 4 cut(s) 306, 792, 1347, 1370
BstENI CCTNNNNNAGG 1 cut(s) 126
BstF5I GGATG 3 cut(s) 916, 1740, 1864
BstFNI CGCG 1 cut(s) 1583
BstKTI GATC 5 cut(s) 667, 733, 814, 1076, 1930
BstMAI GTCTC 2 cut(s) 54, 1804
BstMBI GATC 5 cut(s) 664, 730, 811, 1073, 1927
BstNI CCWGG 5 cut(s) 1188, 1281, 1476, 1485, 1497
BstNSI RCATGY 1 cut(s) 49
BstSCI CCNGG 8 cut(s) 102, 403, 1186, 1279, 1474, 1483, 1495, 1895
BstSFI CTRYAG 3 cut(s) 945, 960, 983
BstUI CGCG 1 cut(s) 1583
BstV2I GAAGAC 1 cut(s) 51
BstX2I RGATCY 2 cut(s) 664, 1927
BstXI CCANNNNNNTGG 1 cut(s) 1626
BstYI RGATCY 2 cut(s) 664, 1927
BsuI GTATCC 2 cut(s) 1311, 1932
BsuRI GGCC 5 cut(s) 609, 868, 958, 1029, 1482
BtsCI GGATG 3 cut(s) 916, 1740, 1864
BtsIMutI CAGTG 2 cut(s) 846, 1200
BveI ACCTGC 2 cut(s) 1237, 1523
Cac8I GCNNGC 5 cut(s) 111, 480, 1116, 1597, 1636
CaiI CAGNNNCTG 3 cut(s) 134, 848, 1889
CciI TCATGA 1 cut(s) 1212
Cfr10I RCCGGY 2 cut(s) 1129, 1813
Cfr13I GGNCC 2 cut(s) 956, 1481
CseI GACGC 6 cut(s) 45, 213, 452, 1092, 1211, 1708
Csp6I GTAC 3 cut(s) 401, 1362, 1402
CspAI ACCGGT 1 cut(s) 1129
CviAII CATG 8 cut(s) 46, 494, 572, 630, 1213, 1264, 1828, 1844
CviQI GTAC 3 cut(s) 401, 1362, 1402
DdeI CTNAG 4 cut(s) 306, 792, 1347, 1370
DpnI GATC 5 cut(s) 666, 732, 813, 1075, 1929
DpnII GATC 5 cut(s) 664, 730, 811, 1073, 1927
DraI TTTAAA 1 cut(s) 117
DriI GACNNNNNGTC 1 cut(s) 85
Eam1104I CTCTTC 2 cut(s) 28, 989
Eam1105I GACNNNNNGTC 1 cut(s) 85
EarI CTCTTC 2 cut(s) 28, 989
Ecl136II GAGCTC 1 cut(s) 1269
Eco130I CCWWGG 1 cut(s) 1098
Eco24I GRGCYC 4 cut(s) 290, 484, 1271, 1391
Eco31I GGTCTC 1 cut(s) 1804
Eco53kI GAGCTC 1 cut(s) 1269
Eco57I CTGAAG 3 cut(s) 633, 1068, 1166
EcoICRI GAGCTC 1 cut(s) 1269
EcoNI CCTNNNNNAGG 1 cut(s) 126
EcoO109I RGGNCCY 1 cut(s) 956
EcoRI GAATTC 1 cut(s) 10
EcoRII CCWGG 5 cut(s) 1186, 1279, 1474, 1483, 1495
EcoT14I CCWWGG 1 cut(s) 1098
EcoT22I ATGCAT 1 cut(s) 1882
EcoT38I GRGCYC 4 cut(s) 290, 484, 1271, 1391
ErhI CCWWGG 1 cut(s) 1098
FaeI CATG 8 cut(s) 49, 497, 575, 633, 1216, 1267, 1831, 1847
FaqI GGGAC 2 cut(s) 199, 1090
FatI CATG 8 cut(s) 45, 493, 571, 629, 1212, 1263, 1827, 1843
FauI CCCGC 2 cut(s) 292, 1328
FokI GGATG 3 cut(s) 923, 1747, 1871
FriOI GRGCYC 4 cut(s) 290, 484, 1271, 1391
FspBI CTAG 5 cut(s) 162, 182, 825, 1311, 1377
GsuI CTGGAG 4 cut(s) 36, 1023, 1602, 1699
HaeIII GGCC 5 cut(s) 609, 868, 958, 1029, 1482
HapII CCGG 7 cut(s) 104, 158, 404, 1071, 1130, 1814, 1896
HgaI GACGC 6 cut(s) 45, 213, 452, 1092, 1211, 1708
Hin1I GRCGYC 2 cut(s) 1103, 1700
Hin1II CATG 8 cut(s) 49, 497, 575, 633, 1216, 1267, 1831, 1847
HindIII AAGCTT 1 cut(s) 751
HpaII CCGG 7 cut(s) 104, 158, 404, 1071, 1130, 1814, 1896
HphI GGTGA 7 cut(s) 201, 356, 740, 780, 821, 1178, 1266
Hpy166II GTNNAC 4 cut(s) 235, 1728, 1853, 1905
Hpy188III TCNNGA 4 cut(s) 522, 668, 1135, 1213
Hpy8I GTNNAC 4 cut(s) 235, 1728, 1853, 1905
Hpy99I CGWCG 1 cut(s) 229
HpyCH4III ACNGT 6 cut(s) 239, 400, 850, 949, 1195, 1950
HpyCH4IV ACGT 1 cut(s) 1147
HpyF3I CTNAG 4 cut(s) 306, 792, 1347, 1370
HpySE526I ACGT 1 cut(s) 1147
Hsp92I GRCGYC 2 cut(s) 1103, 1700
Hsp92II CATG 8 cut(s) 49, 497, 575, 633, 1216, 1267, 1831, 1847
Kzo9I GATC 5 cut(s) 664, 730, 811, 1073, 1927
LmnI GCTCC 3 cut(s) 302, 407, 941
LweI GCATC 8 cut(s) 466, 1127, 1206, 1547, 1619, 1725, 1867, 1889
MaeI CTAG 5 cut(s) 162, 182, 825, 1311, 1377
MaeII ACGT 1 cut(s) 1147
MaeIII GTNAC 5 cut(s) 41, 207, 844, 1696, 1837
MalI GATC 5 cut(s) 666, 732, 813, 1075, 1929
MbiI CCGCTC 2 cut(s) 475, 1335
MboI GATC 5 cut(s) 664, 730, 811, 1073, 1927
MfeI CAATTG 1 cut(s) 1294
MflI RGATCY 2 cut(s) 664, 1927
MhlI GDGCHC 6 cut(s) 290, 484, 689, 1271, 1391, 1798
MluCI AATT 6 cut(s) 10, 203, 1294, 1381, 1503, 1516
MlyI GAGTC 2 cut(s) 356, 1030
MmeI TCCRAC 5 cut(s) 330, 842, 931, 993, 1141
Mph1103I ATGCAT 1 cut(s) 1882
MroXI GAANNNNTTC 1 cut(s) 14
MseI TTAA 6 cut(s) 116, 387, 681, 755, 852, 924
MspA1I CMGCKG 4 cut(s) 550, 1049, 1595, 1886
MspCI CTTAAG 1 cut(s) 754
MspI CCGG 7 cut(s) 104, 158, 404, 1071, 1130, 1814, 1896
MspR9I CCNGG 8 cut(s) 104, 405, 1188, 1281, 1476, 1485, 1497, 1897
MunI CAATTG 1 cut(s) 1294
MvaI CCWGG 5 cut(s) 1188, 1281, 1476, 1485, 1497
MvnI CGCG 1 cut(s) 1583
NciI CCSGG 3 cut(s) 104, 405, 1897
NdeII GATC 5 cut(s) 664, 730, 811, 1073, 1927
NlaIII CATG 8 cut(s) 49, 497, 575, 633, 1216, 1267, 1831, 1847
NlaIV GGNNCC 5 cut(s) 108, 840, 1203, 1251, 1894
NmeAIII GCCGAG 1 cut(s) 635
NmuCI GTSAC 3 cut(s) 207, 844, 1696
NsiI ATGCAT 1 cut(s) 1882
NspI RCATGY 1 cut(s) 49
NspV TTCGAA 1 cut(s) 62
PagI TCATGA 1 cut(s) 1212
PaqCI CACCTGC 1 cut(s) 1523
PasI CCCWGGG 1 cut(s) 1484
PciI ACATGT 1 cut(s) 45
PdmI GAANNNNTTC 1 cut(s) 14
PfeI GAWTC 9 cut(s) 154, 314, 620, 653, 659, 965, 1351, 1490, 1772
PflFI GACNNNGTC 1 cut(s) 217
PflMI CCANNNNNTGG 1 cut(s) 1296
PfoI TCCNGGA 2 cut(s) 1279, 1495
PinAI ACCGGT 1 cut(s) 1129
PleI GAGTC 2 cut(s) 355, 1030
PpsI GAGTC 2 cut(s) 355, 1030
PscI ACATGT 1 cut(s) 45
Psp124BI GAGCTC 1 cut(s) 1271
Psp6I CCWGG 5 cut(s) 1186, 1279, 1474, 1483, 1495
PspGI CCWGG 5 cut(s) 1186, 1279, 1474, 1483, 1495
PspN4I GGNNCC 5 cut(s) 108, 840, 1203, 1251, 1894
PspPI GGNCC 2 cut(s) 956, 1481
PstI CTGCAG 1 cut(s) 987
PstNI CAGNNNCTG 3 cut(s) 134, 848, 1889
PsuI RGATCY 2 cut(s) 664, 1927
PsyI GACNNNGTC 1 cut(s) 217
PvuII CAGCTG 4 cut(s) 550, 1049, 1595, 1886
RsaI GTAC 3 cut(s) 402, 1363, 1403
RsaNI GTAC 3 cut(s) 401, 1362, 1402
SacI GAGCTC 1 cut(s) 1271
SaqAI TTAA 6 cut(s) 116, 387, 681, 755, 852, 924
Sau3AI GATC 5 cut(s) 664, 730, 811, 1073, 1927
Sau96I GGNCC 2 cut(s) 956, 1481
SchI GAGTC 2 cut(s) 356, 1030
ScrFI CCNGG 8 cut(s) 104, 405, 1188, 1281, 1476, 1485, 1497, 1897
SduI GDGCHC 6 cut(s) 290, 484, 689, 1271, 1391, 1798
SfaNI GCATC 8 cut(s) 466, 1127, 1206, 1547, 1619, 1725, 1867, 1889
SfcI CTRYAG 3 cut(s) 945, 960, 983
SfuI TTCGAA 1 cut(s) 62
SmlI CTYRAG 3 cut(s) 530, 754, 862
SmoI CTYRAG 3 cut(s) 530, 754, 862
SpeI ACTAGT 1 cut(s) 1310
Sse9I AATT 6 cut(s) 10, 203, 1294, 1381, 1503, 1516
SsiI CCGC 6 cut(s) 176, 299, 475, 1335, 1581, 1638
SspMI CTAG 5 cut(s) 162, 182, 825, 1311, 1377
SstI GAGCTC 1 cut(s) 1271
StyD4I CCNGG 8 cut(s) 102, 403, 1186, 1279, 1474, 1483, 1495, 1895
StyI CCWWGG 1 cut(s) 1098
TaaI ACNGT 6 cut(s) 239, 400, 850, 949, 1195, 1950
TaiI ACGT 1 cut(s) 1150
TaqI TCGA 8 cut(s) 62, 247, 521, 689, 782, 1317, 1331, 1507
TasI AATT 6 cut(s) 10, 203, 1294, 1381, 1503, 1516
TauI GCSGC 1 cut(s) 478
TfiI GAWTC 9 cut(s) 154, 314, 620, 653, 659, 965, 1351, 1490, 1772
Tru1I TTAA 6 cut(s) 116, 387, 681, 755, 852, 924
Tru9I TTAA 6 cut(s) 116, 387, 681, 755, 852, 924
TscAI CASTG 2 cut(s) 853, 1200
TseFI GTSAC 3 cut(s) 207, 844, 1696
Tsp45I GTSAC 3 cut(s) 207, 844, 1696
TspDTI ATGAA 6 cut(s) 279, 510, 618, 725, 1763, 1844
TspGWI ACGGA 3 cut(s) 425, 1154, 1902
TspRI CASTG 2 cut(s) 853, 1200
Tth111I GACNNNGTC 1 cut(s) 217
Van91I CCANNNNNTGG 1 cut(s) 1296
Vha464I CTTAAG 1 cut(s) 754
XagI CCTNNNNNAGG 1 cut(s) 126
XapI RAATTY 1 cut(s) 10
XceI RCATGY 1 cut(s) 49
XmnI GAANNNNTTC 1 cut(s) 14
XspI CTAG 5 cut(s) 162, 182, 825, 1311, 1377
Zsp2I ATGCAT 1 cut(s) 1882
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.