RchiOBHm_Chr4g0412341

Ubiquitin associated domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
4
OG0009633
Physical Location & Seq
Reverse (-)
36063334 .. 36066306
2973 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ38302

Sequence Viewer

Length: 1989 bp
ATGTCTCCAGCGTCTTCGAAATCCAAATCAAAGGATAAGAAGTCGGGGAAAGAAGCCCCGGTGCCTGCTTTAAAGCCTTCGTCAGGGGCTGCTAATGCAGGGAGTGGGATTCCGGCTAGTGCATACAATCCGCTTCTAGGGACATTCCATACCCTTGAATTGTCACCGACATCGTCTGCGTCGGCTGTTCACAGTAATAGTCGATTTCGGAATATAGATGAAACAGATGACCATTCTGGGGGCTCGGTGGCTGCTGGAGCTGAGTATGATTCTGTTTCAAATAATGGTAGCTGGTCTGGTGACTCGGAAGAACATAAAGACAAAACATCTAATCCTCCTGTTAAGCCAGAAACAGTACCGGGAGCCGACAATGACAAGCGAGAGAAAATCCGTCAGAAGAATGAGAGGAAGCATCAGCGTCAGAAAGAGCGGCGAGCCCAAGAGTTGCATGAACGATGTAGTGGTTATCTTATGTCGAGAAAACTTGAGGCACTTGCTCAACAGCTGGTGGCAATGGGTTTTGAACATGACGAGGCAACAGAGGCTCTCATACAGAATGAAGGCCGAGTAGAGGAAACAGTATCATGGCTTTTGGAAGTTGCTTCAGATTCAGGTAAGCCAAGAGATCAAAACGTTGGTGGGAGTAATTTGAAAATTGACATATCAGAAGAGCTTGCTCAGATTGCAGATCTGGAAGTAAGGTTTAAGTGCTCAAAACAGGAGGTGGAAAGAGCTATTGTAGCCTGTGAGGGTGATCTTCATAAGGCTGCTGAAAGCTTAAGTGTAGCAAAGCAAGACCCACCTTCAATTTCACCTAAGCCAGAAGAAACTGGTGATCCTCCAACTGCTAGTAATGGCAAGGTTCCAGTCACTGTTAATCAGAACTTGAGGCCACAAGTAAAATCTAATCCTCCTACAATACAACAAAGAAGGGACGATAAGGACTTTAACTACACAAAACAAGGAGCTACAGTTGGAGGGCCTGTAGATTCTGCAAACAAACCTCTGCAGCCTTTGAAGAGAGGACAGCCAAAGTTGGAGTGGGCGAAAGGCCAACCGACTCCAGTTCCTGCTGATAGAAGGTGGTCAAGTGCCGGATCAAATCCTTCAGTTTCCTATTCTTTGGCGTCCCCTTTGCAGGCATCATCTCCACCGGTCAAGACGGAGGCACGTTATGTTGCTGTTGGAGGTGAGTTAAAGAACCTTCAGCCTGGAACAGTGAGGGAACCAGTTATCATGATGCAGCGTCCTCAATCTGTCAATACGAAGCAGGTTCCTGCTACTAGCATGAGCTCATCACCTCCTGGAACTGCCACCAATTGGTATCCTTCTACTAGTGTCGAACTTATGAGGTCGAGCGGGTTTTTGCCTCAGATTCCAAGCAGTACAAGCCTCAGCACTAGCAATTTGGGCTCAAATCAGATGTACCACCAGTTTCAGTATCAACAGCAGCAACAACAGCAGCAACAACAGCAACATCAGCATTTTATTCCTGGTGGCCCTGGGGATTCTCCTGGAACAATTCGAGGGAATAATTTGTGGAATAGAGCAGGTGCATCTCAAACACTTGCTGCTGCTTCCTCCCTCGGACTATTCTCCGCGTTGGGGTCAGCTGGCTCATCAGGGGCATCTTCCCCAATAGATTGGAGTGCTGGCGGTGGCTCATATAGGCACTTAGATTACACCAACATAGACTGGAGTTTGGATAGAGGTGTGACGCCCTCTACCAGACCTAATGGGTTGTGGACGGGGATGCCTTCTGCTATGAAGGGCAATACCAACTTTTATGATTCAAAAACTACTGGTTTGGGTGCTCAATCTGCAATGAGACCGGCTTCCTCGAACATGAATGGTGTTACCCTTGTGGGTTTGCAGGATGGAGGTGCTAATGCTGATGCATCAGCTGCTGGTTCCGGGGAGTGGACTTCTCCGTTTGAAGGAGTGGATCTCTTTAGGATACCCAGACAGTTTGTTTCTTCTTCTCCATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

662

Amino Acids

70.65

Weight (kDa)

7.72

Isoelectric Point (pI)

52.63

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
UBA_7 PF22562 163 - 205 9.6e-07 UBA-like domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1541
Acc36I ACCTGC 2 cut(s) 1261, 1541
AccB1I GGYRCC 1 cut(s) 61
AccB7I CCANNNNNTGG 1 cut(s) 1320
AccBSI CCGCTC 2 cut(s) 430, 1359
AccII CGCG 1 cut(s) 1601
AciI CCGC 5 cut(s) 131, 430, 1359, 1599, 1656
AclI AACGTT 1 cut(s) 633
AclWI GGATC 3 cut(s) 830, 1105, 1953
AcuI CTGAAG 3 cut(s) 588, 1092, 1190
AcyI GRCGYC 2 cut(s) 1127, 1718
AfaI GTAC 3 cut(s) 357, 1387, 1427
AfiI CCNNNNNNNGG 9 cut(s) 83, 137, 238, 571, 1138, 1320, 1605, 1920, 1937
AflII CTTAAG 1 cut(s) 778
AgeI ACCGGT 1 cut(s) 1153
AgsI TTSAA 8 cut(s) 158, 279, 524, 652, 807, 1018, 1794, 1937
AhlI ACTAGT 1 cut(s) 1334
AjnI CCWGG 5 cut(s) 1210, 1303, 1492, 1501, 1513
Alw21I GWGCWC 3 cut(s) 713, 1295, 1816
Alw26I GTCTC 2 cut(s) 9, 1822
AlwI GGATC 3 cut(s) 830, 1105, 1953
AlwNI CAGNNNCTG 4 cut(s) 89, 872, 1070, 1907
AoxI GGCC 5 cut(s) 562, 890, 980, 1051, 1498
AsiGI ACCGGT 1 cut(s) 1153
AspS9I GGNCC 2 cut(s) 980, 1499
AsuC2I CCSGG 3 cut(s) 59, 360, 1915
AsuHPI GGTGA 7 cut(s) 156, 311, 764, 804, 845, 1202, 1290
AsuII TTCGAA 1 cut(s) 17
BanI GGYRCC 1 cut(s) 61
BanII GRGCYC 4 cut(s) 245, 439, 1295, 1415
BbsI GAAGAC 1 cut(s) 6
Bbv12I GWGCWC 3 cut(s) 713, 1295, 1816
BbvCI CCTCAGC 1 cut(s) 1394
BccI CCATC 1 cut(s) 1871
BciT130I CCWGG 5 cut(s) 1212, 1305, 1494, 1503, 1515
BciVI GTATCC 2 cut(s) 1335, 1950
BcnI CCSGG 3 cut(s) 59, 360, 1915
BcoDI GTCTC 2 cut(s) 9, 1822
BcuI ACTAGT 1 cut(s) 1334
BfaI CTAG 6 cut(s) 117, 137, 849, 1284, 1335, 1401
BfmI CTRYAG 3 cut(s) 969, 984, 1007
BfrI CTTAAG 1 cut(s) 778
BfuAI ACCTGC 2 cut(s) 1261, 1541
BfuI GTATCC 2 cut(s) 1335, 1950
BglII AGATCT 1 cut(s) 688
Bme1390I CCNGG 8 cut(s) 59, 360, 1212, 1305, 1494, 1503, 1515, 1915
BmgT120I GGNCC 2 cut(s) 980, 1499
BmiI GGNNCC 6 cut(s) 63, 364, 864, 1227, 1275, 1912
BmrFI CCNGG 8 cut(s) 59, 360, 1212, 1305, 1494, 1503, 1515, 1915
BmsI GCATC 8 cut(s) 421, 1151, 1230, 1565, 1637, 1743, 1885, 1907
BpiI GAAGAC 1 cut(s) 6
BplI GAGNNNNNCTC 2 cut(s) 1932, 1964
BpmI CTGGAG 3 cut(s) 276, 1047, 1717
Bpu10I CCTNAGC 2 cut(s) 816, 1394
Bpu14I TTCGAA 1 cut(s) 17
BpuEI CTTGAG 2 cut(s) 506, 907
BpuMI CCSGG 3 cut(s) 59, 360, 1915
BsaHI GRCGYC 2 cut(s) 1127, 1718
BsaI GGTCTC 1 cut(s) 1822
BsaJI CCNNGG 5 cut(s) 57, 1501, 1502, 1585, 1914
BsaWI WCCGGW 1 cut(s) 1153
BsaXI ACNNNNNCTCC 4 cut(s) 957, 969, 987, 999
Bsc4I CCNNNNNNNGG 9 cut(s) 83, 137, 238, 571, 1138, 1320, 1605, 1920, 1937
Bse118I RCCGGY 2 cut(s) 1153, 1831
Bse1I ACTGG 7 cut(s) 835, 866, 1064, 1229, 1432, 1700, 1807
Bse3DI GCAATG 2 cut(s) 519, 1830
BseBI CCWGG 5 cut(s) 1212, 1305, 1494, 1503, 1515
BseDI CCNNGG 5 cut(s) 57, 1501, 1502, 1585, 1914
BseGI GGATG 2 cut(s) 1758, 1882
BseLI CCNNNNNNNGG 9 cut(s) 83, 137, 238, 571, 1138, 1320, 1605, 1920, 1937
BseMI GCAATG 2 cut(s) 519, 1830
BseMII CTCAG 4 cut(s) 252, 692, 1385, 1408
BseNI ACTGG 7 cut(s) 835, 866, 1064, 1229, 1432, 1700, 1807
Bsh1236I CGCG 1 cut(s) 1601
BshFI GGCC 5 cut(s) 564, 892, 982, 1053, 1500
BshNI GGYRCC 1 cut(s) 61
BshTI ACCGGT 1 cut(s) 1153
BsiHKAI GWGCWC 3 cut(s) 713, 1295, 1816
BsiSI CCGG 7 cut(s) 59, 113, 359, 1095, 1154, 1832, 1914
BslFI GGGAC 3 cut(s) 154, 947, 1114
BslI CCNNNNNNNGG 9 cut(s) 83, 137, 238, 571, 1138, 1320, 1605, 1920, 1937
BsmAI GTCTC 2 cut(s) 9, 1822
BsmFI GGGAC 3 cut(s) 154, 947, 1114
BsnI GGCC 5 cut(s) 564, 892, 982, 1053, 1500
Bso31I GGTCTC 1 cut(s) 1822
Bsp119I TTCGAA 1 cut(s) 17
Bsp1286I GDGCHC 6 cut(s) 245, 439, 713, 1295, 1415, 1816
Bsp143I GATC 6 cut(s) 625, 688, 754, 835, 1097, 1945
BspACI CCGC 5 cut(s) 131, 430, 1359, 1599, 1656
BspANI GGCC 5 cut(s) 564, 892, 982, 1053, 1500
BspCNI CTCAG 4 cut(s) 253, 691, 1384, 1407
BspFNI CGCG 1 cut(s) 1601
BspHI TCATGA 1 cut(s) 1236
BspLI GGNNCC 6 cut(s) 63, 364, 864, 1227, 1275, 1912
BspMAI CTGCAG 1 cut(s) 1011
BspMI ACCTGC 2 cut(s) 1261, 1541
BspPI GGATC 3 cut(s) 830, 1105, 1953
BspQI GCTCTTC 1 cut(s) 663
BspT104I TTCGAA 1 cut(s) 17
BspT107I GGYRCC 1 cut(s) 61
BspTI CTTAAG 1 cut(s) 778
BspTNI GGTCTC 1 cut(s) 1822
BsrBI CCGCTC 2 cut(s) 430, 1359
BsrDI GCAATG 2 cut(s) 519, 1830
BsrFI RCCGGY 2 cut(s) 1153, 1831
BsrI ACTGG 7 cut(s) 835, 866, 1064, 1229, 1432, 1700, 1807
BssAI RCCGGY 2 cut(s) 1153, 1831
BssECI CCNNGG 5 cut(s) 57, 1501, 1502, 1585, 1914
BssMI GATC 6 cut(s) 625, 688, 754, 835, 1097, 1945
BssNI GRCGYC 2 cut(s) 1127, 1718
Bst2UI CCWGG 5 cut(s) 1212, 1305, 1494, 1503, 1515
Bst4CI ACNGT 7 cut(s) 194, 355, 580, 874, 973, 1219, 1968
Bst6I CTCTTC 2 cut(s) 663, 1013
BstACI GRCGYC 2 cut(s) 1127, 1718
BstAFI CTTAAG 1 cut(s) 778
BstAPI GCANNNNNTGC 1 cut(s) 1904
BstBI TTCGAA 1 cut(s) 17
BstC8I GCNNGC 6 cut(s) 66, 435, 675, 1140, 1615, 1654
BstDEI CTNAG 6 cut(s) 261, 678, 816, 1371, 1394, 1675
BstENI CCTNNNNNAGG 1 cut(s) 81
BstF5I GGATG 2 cut(s) 1758, 1882
BstFNI CGCG 1 cut(s) 1601
BstKTI GATC 6 cut(s) 628, 691, 757, 838, 1100, 1948
BstMAI GTCTC 2 cut(s) 9, 1822
BstMBI GATC 6 cut(s) 625, 688, 754, 835, 1097, 1945
BstNI CCWGG 5 cut(s) 1212, 1305, 1494, 1503, 1515
BstSCI CCNGG 8 cut(s) 57, 358, 1210, 1303, 1492, 1501, 1513, 1913
BstSFI CTRYAG 3 cut(s) 969, 984, 1007
BstUI CGCG 1 cut(s) 1601
BstV2I GAAGAC 1 cut(s) 6
BstX2I RGATCY 2 cut(s) 688, 1945
BstXI CCANNNNNNTGG 1 cut(s) 1644
BstYI RGATCY 2 cut(s) 688, 1945
BsuI GTATCC 2 cut(s) 1335, 1950
BsuRI GGCC 5 cut(s) 564, 892, 982, 1053, 1500
BtsCI GGATG 2 cut(s) 1758, 1882
BtsIMutI CAGTG 2 cut(s) 870, 1224
BveI ACCTGC 2 cut(s) 1261, 1541
Cac8I GCNNGC 6 cut(s) 66, 435, 675, 1140, 1615, 1654
CaiI CAGNNNCTG 4 cut(s) 89, 872, 1070, 1907
CciI TCATGA 1 cut(s) 1236
Cfr10I RCCGGY 2 cut(s) 1153, 1831
Cfr13I GGNCC 2 cut(s) 980, 1499
CseI GACGC 5 cut(s) 168, 407, 1116, 1235, 1726
Csp6I GTAC 3 cut(s) 356, 1386, 1426
CspAI ACCGGT 1 cut(s) 1153
CviAII CATG 6 cut(s) 449, 527, 585, 1237, 1288, 1846
CviQI GTAC 3 cut(s) 356, 1386, 1426
DdeI CTNAG 6 cut(s) 261, 678, 816, 1371, 1394, 1675
DpnI GATC 6 cut(s) 627, 690, 756, 837, 1099, 1947
DpnII GATC 6 cut(s) 625, 688, 754, 835, 1097, 1945
DraI TTTAAA 1 cut(s) 72
Eam1104I CTCTTC 2 cut(s) 663, 1013
EarI CTCTTC 2 cut(s) 663, 1013
Ecl136II GAGCTC 1 cut(s) 1293
Eco24I GRGCYC 4 cut(s) 245, 439, 1295, 1415
Eco31I GGTCTC 1 cut(s) 1822
Eco53kI GAGCTC 1 cut(s) 1293
Eco57I CTGAAG 3 cut(s) 588, 1092, 1190
EcoICRI GAGCTC 1 cut(s) 1293
EcoNI CCTNNNNNAGG 1 cut(s) 81
EcoO109I RGGNCCY 1 cut(s) 980
EcoRII CCWGG 5 cut(s) 1210, 1303, 1492, 1501, 1513
EcoT22I ATGCAT 1 cut(s) 1900
EcoT38I GRGCYC 4 cut(s) 245, 439, 1295, 1415
FaeI CATG 6 cut(s) 452, 530, 588, 1240, 1291, 1849
FaqI GGGAC 3 cut(s) 154, 947, 1114
FatI CATG 6 cut(s) 448, 526, 584, 1236, 1287, 1845
FauI CCCGC 1 cut(s) 1352
FokI GGATG 2 cut(s) 1765, 1889
FriOI GRGCYC 4 cut(s) 245, 439, 1295, 1415
FspBI CTAG 6 cut(s) 117, 137, 849, 1284, 1335, 1401
GsuI CTGGAG 3 cut(s) 276, 1047, 1717
HaeIII GGCC 5 cut(s) 564, 892, 982, 1053, 1500
HapII CCGG 7 cut(s) 59, 113, 359, 1095, 1154, 1832, 1914
HgaI GACGC 5 cut(s) 168, 407, 1116, 1235, 1726
Hin1I GRCGYC 2 cut(s) 1127, 1718
Hin1II CATG 6 cut(s) 452, 530, 588, 1240, 1291, 1849
HindIII AAGCTT 1 cut(s) 775
HinfI GANTC 9 cut(s) 109, 269, 302, 608, 989, 1060, 1375, 1508, 1790
HpaII CCGG 7 cut(s) 59, 113, 359, 1095, 1154, 1832, 1914
HphI GGTGA 7 cut(s) 156, 311, 764, 804, 845, 1202, 1290
Hpy166II GTNNAC 3 cut(s) 190, 1746, 1923
Hpy188III TCNNGA 4 cut(s) 477, 692, 1159, 1237
Hpy8I GTNNAC 3 cut(s) 190, 1746, 1923
Hpy99I CGWCG 1 cut(s) 184
HpyCH4III ACNGT 7 cut(s) 194, 355, 580, 874, 973, 1219, 1968
HpyCH4IV ACGT 2 cut(s) 633, 1171
HpyF3I CTNAG 6 cut(s) 261, 678, 816, 1371, 1394, 1675
HpySE526I ACGT 2 cut(s) 633, 1171
Hsp92I GRCGYC 2 cut(s) 1127, 1718
Hsp92II CATG 6 cut(s) 452, 530, 588, 1240, 1291, 1849
Kzo9I GATC 6 cut(s) 625, 688, 754, 835, 1097, 1945
LguI GCTCTTC 1 cut(s) 663
LmnI GCTCC 3 cut(s) 257, 362, 965
LweI GCATC 8 cut(s) 421, 1151, 1230, 1565, 1637, 1743, 1885, 1907
MaeI CTAG 6 cut(s) 117, 137, 849, 1284, 1335, 1401
MaeII ACGT 2 cut(s) 633, 1171
MaeIII GTNAC 5 cut(s) 162, 299, 868, 1714, 1855
MalI GATC 6 cut(s) 627, 690, 756, 837, 1099, 1947
MbiI CCGCTC 2 cut(s) 430, 1359
MboI GATC 6 cut(s) 625, 688, 754, 835, 1097, 1945
MfeI CAATTG 1 cut(s) 1318
MflI RGATCY 2 cut(s) 688, 1945
MhlI GDGCHC 6 cut(s) 245, 439, 713, 1295, 1415, 1816
MluCI AATT 8 cut(s) 158, 646, 654, 807, 1318, 1405, 1521, 1534
MlyI GAGTC 2 cut(s) 296, 1054
MmeI TCCRAC 4 cut(s) 866, 955, 1017, 1165
Mph1103I ATGCAT 1 cut(s) 1900
MseI TTAA 7 cut(s) 71, 342, 705, 779, 876, 948, 1196
MspA1I CMGCKG 3 cut(s) 505, 1613, 1904
MspCI CTTAAG 1 cut(s) 778
MspI CCGG 7 cut(s) 59, 113, 359, 1095, 1154, 1832, 1914
MspR9I CCNGG 8 cut(s) 59, 360, 1212, 1305, 1494, 1503, 1515, 1915
MunI CAATTG 1 cut(s) 1318
MvaI CCWGG 5 cut(s) 1212, 1305, 1494, 1503, 1515
MvnI CGCG 1 cut(s) 1601
NciI CCSGG 3 cut(s) 59, 360, 1915
NdeII GATC 6 cut(s) 625, 688, 754, 835, 1097, 1945
NlaIII CATG 6 cut(s) 452, 530, 588, 1240, 1291, 1849
NlaIV GGNNCC 6 cut(s) 63, 364, 864, 1227, 1275, 1912
NmeAIII GCCGAG 1 cut(s) 590
NmuCI GTSAC 4 cut(s) 162, 299, 868, 1714
NsiI ATGCAT 1 cut(s) 1900
NspV TTCGAA 1 cut(s) 17
PagI TCATGA 1 cut(s) 1236
PaqCI CACCTGC 1 cut(s) 1541
PasI CCCWGGG 1 cut(s) 1502
PciSI GCTCTTC 1 cut(s) 663
PfeI GAWTC 7 cut(s) 109, 269, 608, 989, 1375, 1508, 1790
PflFI GACNNNGTC 1 cut(s) 172
PflMI CCANNNNNTGG 1 cut(s) 1320
PfoI TCCNGGA 2 cut(s) 1303, 1513
PinAI ACCGGT 1 cut(s) 1153
PleI GAGTC 2 cut(s) 296, 1054
PpsI GAGTC 2 cut(s) 296, 1054
Psp124BI GAGCTC 1 cut(s) 1295
Psp1406I AACGTT 1 cut(s) 633
Psp6I CCWGG 5 cut(s) 1210, 1303, 1492, 1501, 1513
PspGI CCWGG 5 cut(s) 1210, 1303, 1492, 1501, 1513
PspN4I GGNNCC 6 cut(s) 63, 364, 864, 1227, 1275, 1912
PspPI GGNCC 2 cut(s) 980, 1499
PstI CTGCAG 1 cut(s) 1011
PstNI CAGNNNCTG 4 cut(s) 89, 872, 1070, 1907
PsuI RGATCY 2 cut(s) 688, 1945
PsyI GACNNNGTC 1 cut(s) 172
PvuII CAGCTG 3 cut(s) 505, 1613, 1904
RsaI GTAC 3 cut(s) 357, 1387, 1427
RsaNI GTAC 3 cut(s) 356, 1386, 1426
SacI GAGCTC 1 cut(s) 1295
SapI GCTCTTC 1 cut(s) 663
SaqAI TTAA 7 cut(s) 71, 342, 705, 779, 876, 948, 1196
Sau3AI GATC 6 cut(s) 625, 688, 754, 835, 1097, 1945
Sau96I GGNCC 2 cut(s) 980, 1499
SchI GAGTC 2 cut(s) 296, 1054
ScrFI CCNGG 8 cut(s) 59, 360, 1212, 1305, 1494, 1503, 1515, 1915
SduI GDGCHC 6 cut(s) 245, 439, 713, 1295, 1415, 1816
SfaNI GCATC 8 cut(s) 421, 1151, 1230, 1565, 1637, 1743, 1885, 1907
SfcI CTRYAG 3 cut(s) 969, 984, 1007
SfuI TTCGAA 1 cut(s) 17
SmlI CTYRAG 3 cut(s) 485, 778, 886
SmoI CTYRAG 3 cut(s) 485, 778, 886
SpeI ACTAGT 1 cut(s) 1334
Sse9I AATT 8 cut(s) 158, 646, 654, 807, 1318, 1405, 1521, 1534
SsiI CCGC 5 cut(s) 131, 430, 1359, 1599, 1656
SspMI CTAG 6 cut(s) 117, 137, 849, 1284, 1335, 1401
SstI GAGCTC 1 cut(s) 1295
StyD4I CCNGG 8 cut(s) 57, 358, 1210, 1303, 1492, 1501, 1513, 1913
TaaI ACNGT 7 cut(s) 194, 355, 580, 874, 973, 1219, 1968
TaiI ACGT 2 cut(s) 636, 1174
TaqI TCGA 7 cut(s) 17, 202, 476, 1341, 1355, 1525, 1841
TasI AATT 8 cut(s) 158, 646, 654, 807, 1318, 1405, 1521, 1534
TatI WGTACW 1 cut(s) 1385
TauI GCSGC 1 cut(s) 433
TfiI GAWTC 7 cut(s) 109, 269, 608, 989, 1375, 1508, 1790
Tru1I TTAA 7 cut(s) 71, 342, 705, 779, 876, 948, 1196
Tru9I TTAA 7 cut(s) 71, 342, 705, 779, 876, 948, 1196
TscAI CASTG 2 cut(s) 877, 1224
TseFI GTSAC 4 cut(s) 162, 299, 868, 1714
Tsp45I GTSAC 4 cut(s) 162, 299, 868, 1714
TspDTI ATGAA 6 cut(s) 234, 465, 573, 749, 1781, 1862
TspGWI ACGGA 3 cut(s) 380, 1178, 1920
TspRI CASTG 2 cut(s) 877, 1224
Tth111I GACNNNGTC 1 cut(s) 172
Van91I CCANNNNNTGG 1 cut(s) 1320
Vha464I CTTAAG 1 cut(s) 778
XagI CCTNNNNNAGG 1 cut(s) 81
XcmI CCANNNNNNNNNTGG 1 cut(s) 1038
XspI CTAG 6 cut(s) 117, 137, 849, 1284, 1335, 1401
Zsp2I ATGCAT 1 cut(s) 1900
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.