Rw4G014410

Ubiquitin associated domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr4
OG0009633
Physical Location & Seq
Reverse (-)
33355440 .. 33358280
2841 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw4G014410.1

Sequence Viewer

Length: 1977 bp
ATGTCTCCAGCGTCTTCGAAATCCAAATCAAAGGACAAGAAGTCGGGGAAAGAAGCCCCGGTGCCTGCTTTAAAGCCTTTGTCAGGGGCTGCTAATGCAGGGAGTGGGATTCCGGCTAGTGCATACAATCCGCTTCTAGGGACATTCCATACCCTTGAATTGTCCCCGACATCGTCTGCGTCGGCTGTTCACAGTAATAGTCGATTTCGGAATATAGATGAAACAGATGACCATTCTGGGGGCTCGGTGGCTGCAGGAGCTGAGTATGATTCTGTTTCAAATAATGGTAGCTGGTCTGGTGAGTCGGAAGAACATAAAGACAAAACATCTAATCCTCCTGTTAAGCCAGAAACAGTACCGGGAGCCGACAACGACAAGCGAGAGAAAATCCGTCAGAAGAATGAGAGGAAGCATCAGCGTCAGAAAGAGCGGCGAGCCCAAGAGTTGCATGAACGATGTAGTGGTTATCTTATGTCGAGAAAACTTGAGGCACTTGCTCAACAGCTGGTGGCAATGGGTTTTGAACATGACGAGGCAACAGAGGCTCTCATACAGAATGAAGGCCGAGTAGAGGAATCAGTATCATGGCTTTTGGAAGGTGCTTCAGATTCAGGTAAGCCAAGAGATCAAAACGTTGGTGGGAGTAATTTGAAAATTGACATATCAGAAGAGCTTGCTCAGATTGCAGATCTGGAAGTAAGGTTTAAGTGCTCGAAACAGGAGGTGGAAAGAGCTATTGTAGCCTGTGAGGGTGATCTTCATAAGGCTGCTGAAAGCTTAAGAGTAGCAAAGCAAGACCCACCTTCGATTTCACCTAAGCCAGAAGAAACTGGTGATCCTCCAACTGCTAGTAATGGCAAGGTTCCAGTCACTGTTAATCAGAACTTGAGGCCACAAGTAAAATCTAATCCTCCTACAATACAACAAAGAAGGGACGATAAGGACTTTAACTACACAAAACAAGGAGCTACAGTTGGAGGGCCTGTAGATTCTGCAAACAAACCTCTGCAGCCTTTGAAGAGAGGACAGCCAAAGTTGGAGTGGGCGAAAGGCCAACCGACTCCAGTTCCTGCTGATAGAAGGTGGTCAAGTGCCGGATCAAATCCTTCAGTTTCCTATTCTTTGGCGTCCCCTTTGCAGGCATCATCTCCACCGGTCAAGACGGAGGCACGTTATGTAGCTGTTGGAGGTGAGTTAAAGAACCTTCAGCCTGGAACAGTGAGGGAACCAGTTATCATGATGCAGCGTCCTCAATCTGTCAATACGAAGCAGGTTCCTGCTACTAGCATGAGCTCATCACCTCCTGGAACTGCCACCAATTGGTATCCTTCTACTAGTGTCGAACTTATGAGGTCGAGCGGGTTTTTGCCTCAGATTCCAAGCAGTACAAGCCTCAGCACTAGCAATTTGGGCTCAAATCAGATGTACCACCAGTTTCAGTATCAACAGCAGCAACAACAGCAACATCAGCATTTTATTCCTGGTGGCCCTGGGGATTCTCCTGGAACAATTCGAGGGAATAATTTGTGGAATAGAGCAGGTGCATCTCAAACACTTGCTGCTGCTTCCTCCCTCGGACTATTCTCCGCGTTGGGGTCAGCTGGCTCATCAGGGGCATCTTCTCCAGTAGATTGGAGTGCTGGCGGTGGCTCATTTAGGCACTTAGATTACACCAACATAGACTGGAGTTTGGATAGAGGTGTGACGCCCTCTACCAGACCTAATGGGTTGTGGACGGGGATGCCTTCTGCTATGAAGGGCAATACCAACTTTTATGATTCAAAAACTACTGGTTTGGGTGCTCAATCTGCAATGAGACCGGCTTCCTCGAACATGAATGGTGTTACTCTTGTGGGTTTGCAGGATGGAGGTGCTAATGCTGATGCATCAGCTGCTGGTTCCGGGGAGTGGACTTCTCCGTTTGAGGGAGTGGATCTCTTTAGGATACCCAGACAGTTTGTTTCTTCTTCTCCATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

658

Amino Acids

70.16

Weight (kDa)

8.2

Isoelectric Point (pI)

51.79

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
UBA_7 PF22562 163 - 205 9.7e-07 UBA-like domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1529
Acc36I ACCTGC 2 cut(s) 1261, 1529
AccB1I GGYRCC 1 cut(s) 61
AccB7I CCANNNNNTGG 1 cut(s) 1320
AccBSI CCGCTC 2 cut(s) 430, 1359
AccII CGCG 1 cut(s) 1589
AciI CCGC 5 cut(s) 131, 430, 1359, 1587, 1644
AclI AACGTT 1 cut(s) 633
AclWI GGATC 3 cut(s) 830, 1105, 1941
AcuI CTGAAG 3 cut(s) 588, 1092, 1190
AcyI GRCGYC 2 cut(s) 1127, 1706
AfaI GTAC 3 cut(s) 357, 1387, 1427
AfiI CCNNNNNNNGG 9 cut(s) 83, 137, 238, 571, 1138, 1320, 1593, 1908, 1925
AflII CTTAAG 1 cut(s) 778
AgeI ACCGGT 1 cut(s) 1153
AgsI TTSAA 6 cut(s) 158, 279, 524, 652, 1018, 1782
AhdI GACNNNNNGTC 1 cut(s) 40
AhlI ACTAGT 1 cut(s) 1334
AjnI CCWGG 5 cut(s) 1210, 1303, 1480, 1489, 1501
Alw21I GWGCWC 3 cut(s) 713, 1295, 1804
Alw26I GTCTC 2 cut(s) 9, 1810
AlwI GGATC 3 cut(s) 830, 1105, 1941
AlwNI CAGNNNCTG 5 cut(s) 89, 260, 872, 1070, 1895
AoxI GGCC 5 cut(s) 562, 890, 980, 1051, 1486
ApeKI GCWGC 9 cut(s) 89, 251, 767, 1009, 1243, 1450, 1559, 1562, 1892
AsiGI ACCGGT 1 cut(s) 1153
AspS9I GGNCC 2 cut(s) 980, 1487
AsuC2I CCSGG 3 cut(s) 59, 360, 1903
AsuHPI GGTGA 6 cut(s) 311, 764, 804, 845, 1202, 1290
AsuII TTCGAA 1 cut(s) 17
BanI GGYRCC 1 cut(s) 61
BanII GRGCYC 4 cut(s) 245, 439, 1295, 1415
BbsI GAAGAC 1 cut(s) 6
Bbv12I GWGCWC 3 cut(s) 713, 1295, 1804
BbvCI CCTCAGC 1 cut(s) 1394
BbvI GCAGC 9 cut(s) 76, 238, 754, 1021, 1255, 1462, 1546, 1549, 1879
BccI CCATC 1 cut(s) 1859
BciT130I CCWGG 5 cut(s) 1212, 1305, 1482, 1491, 1503
BciVI GTATCC 2 cut(s) 1335, 1938
BcnI CCSGG 3 cut(s) 59, 360, 1903
BcoDI GTCTC 2 cut(s) 9, 1810
BcuI ACTAGT 1 cut(s) 1334
BfaI CTAG 6 cut(s) 117, 137, 849, 1284, 1335, 1401
BfmI CTRYAG 4 cut(s) 252, 969, 984, 1007
BfrI CTTAAG 1 cut(s) 778
BfuAI ACCTGC 2 cut(s) 1261, 1529
BfuI GTATCC 2 cut(s) 1335, 1938
BglII AGATCT 1 cut(s) 688
Bme1390I CCNGG 8 cut(s) 59, 360, 1212, 1305, 1482, 1491, 1503, 1903
BmeRI GACNNNNNGTC 1 cut(s) 40
BmgT120I GGNCC 2 cut(s) 980, 1487
BmiI GGNNCC 6 cut(s) 63, 364, 864, 1227, 1275, 1900
BmrFI CCNGG 8 cut(s) 59, 360, 1212, 1305, 1482, 1491, 1503, 1903
BmsI GCATC 8 cut(s) 421, 1151, 1230, 1553, 1625, 1731, 1873, 1895
BpiI GAAGAC 1 cut(s) 6
BplI GAGNNNNNCTC 2 cut(s) 1920, 1952
BpmI CTGGAG 3 cut(s) 1047, 1608, 1705
Bpu10I CCTNAGC 2 cut(s) 816, 1394
Bpu14I TTCGAA 1 cut(s) 17
BpuEI CTTGAG 2 cut(s) 506, 907
BpuMI CCSGG 3 cut(s) 59, 360, 1903
BsaHI GRCGYC 2 cut(s) 1127, 1706
BsaI GGTCTC 1 cut(s) 1810
BsaJI CCNNGG 5 cut(s) 57, 1489, 1490, 1573, 1902
BsaWI WCCGGW 1 cut(s) 1153
BsaXI ACNNNNNCTCC 4 cut(s) 957, 969, 987, 999
Bsc4I CCNNNNNNNGG 9 cut(s) 83, 137, 238, 571, 1138, 1320, 1593, 1908, 1925
Bse118I RCCGGY 2 cut(s) 1153, 1819
Bse1I ACTGG 8 cut(s) 835, 866, 1064, 1229, 1432, 1625, 1688, 1795
Bse3DI GCAATG 2 cut(s) 519, 1818
BseBI CCWGG 5 cut(s) 1212, 1305, 1482, 1491, 1503
BseDI CCNNGG 5 cut(s) 57, 1489, 1490, 1573, 1902
BseGI GGATG 2 cut(s) 1746, 1870
BseLI CCNNNNNNNGG 9 cut(s) 83, 137, 238, 571, 1138, 1320, 1593, 1908, 1925
BseMI GCAATG 2 cut(s) 519, 1818
BseMII CTCAG 4 cut(s) 252, 692, 1385, 1408
BseNI ACTGG 8 cut(s) 835, 866, 1064, 1229, 1432, 1625, 1688, 1795
BseXI GCAGC 9 cut(s) 76, 238, 754, 1021, 1255, 1462, 1546, 1549, 1879
Bsh1236I CGCG 1 cut(s) 1589
BshFI GGCC 5 cut(s) 564, 892, 982, 1053, 1488
BshNI GGYRCC 1 cut(s) 61
BshTI ACCGGT 1 cut(s) 1153
BsiHKAI GWGCWC 3 cut(s) 713, 1295, 1804
BsiSI CCGG 7 cut(s) 59, 113, 359, 1095, 1154, 1820, 1902
BslFI GGGAC 4 cut(s) 148, 154, 947, 1114
BslI CCNNNNNNNGG 9 cut(s) 83, 137, 238, 571, 1138, 1320, 1593, 1908, 1925
BsmAI GTCTC 2 cut(s) 9, 1810
BsmFI GGGAC 4 cut(s) 148, 154, 947, 1114
BsnI GGCC 5 cut(s) 564, 892, 982, 1053, 1488
Bso31I GGTCTC 1 cut(s) 1810
Bsp119I TTCGAA 1 cut(s) 17
Bsp1286I GDGCHC 6 cut(s) 245, 439, 713, 1295, 1415, 1804
Bsp143I GATC 6 cut(s) 625, 688, 754, 835, 1097, 1933
BspACI CCGC 5 cut(s) 131, 430, 1359, 1587, 1644
BspANI GGCC 5 cut(s) 564, 892, 982, 1053, 1488
BspCNI CTCAG 4 cut(s) 253, 691, 1384, 1407
BspFNI CGCG 1 cut(s) 1589
BspHI TCATGA 1 cut(s) 1236
BspLI GGNNCC 6 cut(s) 63, 364, 864, 1227, 1275, 1900
BspMAI CTGCAG 2 cut(s) 256, 1011
BspMI ACCTGC 2 cut(s) 1261, 1529
BspPI GGATC 3 cut(s) 830, 1105, 1941
BspQI GCTCTTC 1 cut(s) 663
BspT104I TTCGAA 1 cut(s) 17
BspT107I GGYRCC 1 cut(s) 61
BspTI CTTAAG 1 cut(s) 778
BspTNI GGTCTC 1 cut(s) 1810
BsrBI CCGCTC 2 cut(s) 430, 1359
BsrDI GCAATG 2 cut(s) 519, 1818
BsrFI RCCGGY 2 cut(s) 1153, 1819
BsrI ACTGG 8 cut(s) 835, 866, 1064, 1229, 1432, 1625, 1688, 1795
BssAI RCCGGY 2 cut(s) 1153, 1819
BssECI CCNNGG 5 cut(s) 57, 1489, 1490, 1573, 1902
BssMI GATC 6 cut(s) 625, 688, 754, 835, 1097, 1933
BssNI GRCGYC 2 cut(s) 1127, 1706
Bst2UI CCWGG 5 cut(s) 1212, 1305, 1482, 1491, 1503
Bst4CI ACNGT 6 cut(s) 194, 355, 874, 973, 1219, 1956
Bst6I CTCTTC 2 cut(s) 663, 1013
BstACI GRCGYC 2 cut(s) 1127, 1706
BstAFI CTTAAG 1 cut(s) 778
BstAPI GCANNNNNTGC 1 cut(s) 1892
BstBI TTCGAA 1 cut(s) 17
BstC8I GCNNGC 6 cut(s) 66, 435, 675, 1140, 1603, 1642
BstDEI CTNAG 6 cut(s) 261, 678, 816, 1371, 1394, 1663
BstENI CCTNNNNNAGG 1 cut(s) 81
BstF5I GGATG 2 cut(s) 1746, 1870
BstFNI CGCG 1 cut(s) 1589
BstKTI GATC 6 cut(s) 628, 691, 757, 838, 1100, 1936
BstMAI GTCTC 2 cut(s) 9, 1810
BstMBI GATC 6 cut(s) 625, 688, 754, 835, 1097, 1933
BstNI CCWGG 5 cut(s) 1212, 1305, 1482, 1491, 1503
BstSCI CCNGG 8 cut(s) 57, 358, 1210, 1303, 1480, 1489, 1501, 1901
BstSFI CTRYAG 4 cut(s) 252, 969, 984, 1007
BstUI CGCG 1 cut(s) 1589
BstV1I GCAGC 9 cut(s) 76, 238, 754, 1021, 1255, 1462, 1546, 1549, 1879
BstV2I GAAGAC 1 cut(s) 6
BstX2I RGATCY 2 cut(s) 688, 1933
BstXI CCANNNNNNTGG 1 cut(s) 1632
BstYI RGATCY 2 cut(s) 688, 1933
BsuI GTATCC 2 cut(s) 1335, 1938
BsuRI GGCC 5 cut(s) 564, 892, 982, 1053, 1488
BtsCI GGATG 2 cut(s) 1746, 1870
BtsIMutI CAGTG 2 cut(s) 870, 1224
BveI ACCTGC 2 cut(s) 1261, 1529
Cac8I GCNNGC 6 cut(s) 66, 435, 675, 1140, 1603, 1642
CaiI CAGNNNCTG 5 cut(s) 89, 260, 872, 1070, 1895
CciI TCATGA 1 cut(s) 1236
Cfr10I RCCGGY 2 cut(s) 1153, 1819
Cfr13I GGNCC 2 cut(s) 980, 1487
CseI GACGC 5 cut(s) 168, 407, 1116, 1235, 1714
Csp6I GTAC 3 cut(s) 356, 1386, 1426
CspAI ACCGGT 1 cut(s) 1153
CviAII CATG 6 cut(s) 449, 527, 585, 1237, 1288, 1834
CviQI GTAC 3 cut(s) 356, 1386, 1426
DdeI CTNAG 6 cut(s) 261, 678, 816, 1371, 1394, 1663
DpnI GATC 6 cut(s) 627, 690, 756, 837, 1099, 1935
DpnII GATC 6 cut(s) 625, 688, 754, 835, 1097, 1933
DraI TTTAAA 1 cut(s) 72
DriI GACNNNNNGTC 1 cut(s) 40
Eam1104I CTCTTC 2 cut(s) 663, 1013
Eam1105I GACNNNNNGTC 1 cut(s) 40
EarI CTCTTC 2 cut(s) 663, 1013
Ecl136II GAGCTC 1 cut(s) 1293
Eco24I GRGCYC 4 cut(s) 245, 439, 1295, 1415
Eco31I GGTCTC 1 cut(s) 1810
Eco53kI GAGCTC 1 cut(s) 1293
Eco57I CTGAAG 3 cut(s) 588, 1092, 1190
EcoICRI GAGCTC 1 cut(s) 1293
EcoNI CCTNNNNNAGG 1 cut(s) 81
EcoO109I RGGNCCY 1 cut(s) 980
EcoRII CCWGG 5 cut(s) 1210, 1303, 1480, 1489, 1501
EcoT22I ATGCAT 1 cut(s) 1888
EcoT38I GRGCYC 4 cut(s) 245, 439, 1295, 1415
FaeI CATG 6 cut(s) 452, 530, 588, 1240, 1291, 1837
FaqI GGGAC 4 cut(s) 148, 154, 947, 1114
FatI CATG 6 cut(s) 448, 526, 584, 1236, 1287, 1833
FauI CCCGC 1 cut(s) 1352
FokI GGATG 2 cut(s) 1753, 1877
FriOI GRGCYC 4 cut(s) 245, 439, 1295, 1415
FspBI CTAG 6 cut(s) 117, 137, 849, 1284, 1335, 1401
GsuI CTGGAG 3 cut(s) 1047, 1608, 1705
HaeIII GGCC 5 cut(s) 564, 892, 982, 1053, 1488
HapII CCGG 7 cut(s) 59, 113, 359, 1095, 1154, 1820, 1902
HgaI GACGC 5 cut(s) 168, 407, 1116, 1235, 1714
Hin1I GRCGYC 2 cut(s) 1127, 1706
Hin1II CATG 6 cut(s) 452, 530, 588, 1240, 1291, 1837
HindIII AAGCTT 1 cut(s) 775
HpaII CCGG 7 cut(s) 59, 113, 359, 1095, 1154, 1820, 1902
HphI GGTGA 6 cut(s) 311, 764, 804, 845, 1202, 1290
Hpy166II GTNNAC 3 cut(s) 190, 1734, 1911
Hpy188III TCNNGA 4 cut(s) 477, 692, 1159, 1237
Hpy8I GTNNAC 3 cut(s) 190, 1734, 1911
Hpy99I CGWCG 1 cut(s) 184
HpyCH4III ACNGT 6 cut(s) 194, 355, 874, 973, 1219, 1956
HpyCH4IV ACGT 2 cut(s) 633, 1171
HpyF3I CTNAG 6 cut(s) 261, 678, 816, 1371, 1394, 1663
HpySE526I ACGT 2 cut(s) 633, 1171
Hsp92I GRCGYC 2 cut(s) 1127, 1706
Hsp92II CATG 6 cut(s) 452, 530, 588, 1240, 1291, 1837
Kzo9I GATC 6 cut(s) 625, 688, 754, 835, 1097, 1933
LguI GCTCTTC 1 cut(s) 663
LmnI GCTCC 3 cut(s) 257, 362, 965
Lsp1109I GCAGC 9 cut(s) 76, 238, 754, 1021, 1255, 1462, 1546, 1549, 1879
LweI GCATC 8 cut(s) 421, 1151, 1230, 1553, 1625, 1731, 1873, 1895
MaeI CTAG 6 cut(s) 117, 137, 849, 1284, 1335, 1401
MaeII ACGT 2 cut(s) 633, 1171
MaeIII GTNAC 3 cut(s) 868, 1702, 1843
MalI GATC 6 cut(s) 627, 690, 756, 837, 1099, 1935
MbiI CCGCTC 2 cut(s) 430, 1359
MboI GATC 6 cut(s) 625, 688, 754, 835, 1097, 1933
MfeI CAATTG 1 cut(s) 1318
MflI RGATCY 2 cut(s) 688, 1933
MhlI GDGCHC 6 cut(s) 245, 439, 713, 1295, 1415, 1804
MluCI AATT 7 cut(s) 158, 646, 654, 1318, 1405, 1509, 1522
MlyI GAGTC 2 cut(s) 311, 1054
MmeI TCCRAC 5 cut(s) 285, 866, 955, 1017, 1165
Mph1103I ATGCAT 1 cut(s) 1888
MseI TTAA 7 cut(s) 71, 342, 705, 779, 876, 948, 1196
MspA1I CMGCKG 3 cut(s) 505, 1601, 1892
MspCI CTTAAG 1 cut(s) 778
MspI CCGG 7 cut(s) 59, 113, 359, 1095, 1154, 1820, 1902
MspR9I CCNGG 8 cut(s) 59, 360, 1212, 1305, 1482, 1491, 1503, 1903
MunI CAATTG 1 cut(s) 1318
MvaI CCWGG 5 cut(s) 1212, 1305, 1482, 1491, 1503
MvnI CGCG 1 cut(s) 1589
NciI CCSGG 3 cut(s) 59, 360, 1903
NdeII GATC 6 cut(s) 625, 688, 754, 835, 1097, 1933
NlaIII CATG 6 cut(s) 452, 530, 588, 1240, 1291, 1837
NlaIV GGNNCC 6 cut(s) 63, 364, 864, 1227, 1275, 1900
NmeAIII GCCGAG 1 cut(s) 590
NmuCI GTSAC 2 cut(s) 868, 1702
NsiI ATGCAT 1 cut(s) 1888
NspV TTCGAA 1 cut(s) 17
PagI TCATGA 1 cut(s) 1236
PaqCI CACCTGC 1 cut(s) 1529
PasI CCCWGGG 1 cut(s) 1490
PciSI GCTCTTC 1 cut(s) 663
PfeI GAWTC 8 cut(s) 109, 269, 575, 608, 989, 1375, 1496, 1778
PflFI GACNNNGTC 1 cut(s) 172
PflMI CCANNNNNTGG 1 cut(s) 1320
PfoI TCCNGGA 2 cut(s) 1303, 1501
PinAI ACCGGT 1 cut(s) 1153
PleI GAGTC 2 cut(s) 310, 1054
PpsI GAGTC 2 cut(s) 310, 1054
Psp124BI GAGCTC 1 cut(s) 1295
Psp1406I AACGTT 1 cut(s) 633
Psp6I CCWGG 5 cut(s) 1210, 1303, 1480, 1489, 1501
PspGI CCWGG 5 cut(s) 1210, 1303, 1480, 1489, 1501
PspN4I GGNNCC 6 cut(s) 63, 364, 864, 1227, 1275, 1900
PspPI GGNCC 2 cut(s) 980, 1487
PstI CTGCAG 2 cut(s) 256, 1011
PstNI CAGNNNCTG 5 cut(s) 89, 260, 872, 1070, 1895
PsuI RGATCY 2 cut(s) 688, 1933
PsyI GACNNNGTC 1 cut(s) 172
PvuII CAGCTG 3 cut(s) 505, 1601, 1892
RsaI GTAC 3 cut(s) 357, 1387, 1427
RsaNI GTAC 3 cut(s) 356, 1386, 1426
SacI GAGCTC 1 cut(s) 1295
SapI GCTCTTC 1 cut(s) 663
SaqAI TTAA 7 cut(s) 71, 342, 705, 779, 876, 948, 1196
Sau3AI GATC 6 cut(s) 625, 688, 754, 835, 1097, 1933
Sau96I GGNCC 2 cut(s) 980, 1487
SchI GAGTC 2 cut(s) 311, 1054
ScrFI CCNGG 8 cut(s) 59, 360, 1212, 1305, 1482, 1491, 1503, 1903
SduI GDGCHC 6 cut(s) 245, 439, 713, 1295, 1415, 1804
SfaNI GCATC 8 cut(s) 421, 1151, 1230, 1553, 1625, 1731, 1873, 1895
SfcI CTRYAG 4 cut(s) 252, 969, 984, 1007
SfuI TTCGAA 1 cut(s) 17
SmlI CTYRAG 3 cut(s) 485, 778, 886
SmoI CTYRAG 3 cut(s) 485, 778, 886
SpeI ACTAGT 1 cut(s) 1334
Sse9I AATT 7 cut(s) 158, 646, 654, 1318, 1405, 1509, 1522
SsiI CCGC 5 cut(s) 131, 430, 1359, 1587, 1644
SspMI CTAG 6 cut(s) 117, 137, 849, 1284, 1335, 1401
SstI GAGCTC 1 cut(s) 1295
StyD4I CCNGG 8 cut(s) 57, 358, 1210, 1303, 1480, 1489, 1501, 1901
TaaI ACNGT 6 cut(s) 194, 355, 874, 973, 1219, 1956
TaiI ACGT 2 cut(s) 636, 1174
TaqI TCGA 9 cut(s) 17, 202, 476, 713, 806, 1341, 1355, 1513, 1829
TasI AATT 7 cut(s) 158, 646, 654, 1318, 1405, 1509, 1522
TatI WGTACW 1 cut(s) 1385
TauI GCSGC 1 cut(s) 433
TfiI GAWTC 8 cut(s) 109, 269, 575, 608, 989, 1375, 1496, 1778
Tru1I TTAA 7 cut(s) 71, 342, 705, 779, 876, 948, 1196
Tru9I TTAA 7 cut(s) 71, 342, 705, 779, 876, 948, 1196
TscAI CASTG 2 cut(s) 877, 1224
TseFI GTSAC 2 cut(s) 868, 1702
TseI GCWGC 9 cut(s) 89, 251, 767, 1009, 1243, 1450, 1559, 1562, 1892
Tsp45I GTSAC 2 cut(s) 868, 1702
TspDTI ATGAA 6 cut(s) 234, 465, 573, 749, 1769, 1850
TspGWI ACGGA 3 cut(s) 380, 1178, 1908
TspRI CASTG 2 cut(s) 877, 1224
Tth111I GACNNNGTC 1 cut(s) 172
Van91I CCANNNNNTGG 1 cut(s) 1320
Vha464I CTTAAG 1 cut(s) 778
XagI CCTNNNNNAGG 1 cut(s) 81
XcmI CCANNNNNNNNNTGG 1 cut(s) 1038
XspI CTAG 6 cut(s) 117, 137, 849, 1284, 1335, 1401
Zsp2I ATGCAT 1 cut(s) 1888
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.