pycom13g29210

Ubiquitin associated domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr13
OG0009633
Physical Location & Seq
Reverse (-)
25749296 .. 25751278
1983 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom13g29210.1

Sequence Viewer

Length: 1983 bp
ATGTCTCCAGCATCGTCCAGATCTAAGTCTAAGGACAAGAAGCCTATCAAAGAAACGCAGACACCTTTAAAGCCTTCAACGGGCCCTGCTAATGCAAGTAGTGGGGTCCCAGCTAGTGCATACAATCCACTTTTAGGAACCTTCCATACCCTTGAATTATCACCAACACCTTCTGTGTCGCCTCTTCACAGTAATAGTCGTTTCCGCAACATAGATGAAACAGATGACCATTCTGGGGGCTCTGTTGCTACAGGAGTGGAGTATGATTCTGTTTCCAATAATGGTAGCTGGTCAGGTGAGTCGGAAGACCATAAAGACAAGACATCTAATCCTCCTGCCAAGCAGGAAGCAGTCCCAGGAGCTGACAATGACAAGCGAGAGAAAATCCGTCAGAAGAATGAGAGGAAGCATCAGCGACAGAAAGAGCGGCGAGCTCAGGAGTTGCATGAACGATGCAGTGGTTATATCATGTCAAGAAAGCTTGAGGCACTTGCTCAACAGCTTGTGGCAATGGGATTTTCACAAGAACGGGCAACCATGGCTCTCATACTGAATGAAGGCAGAGTAGAGGAATCAGTAGCTTGGCTTTTTGAAGGTGGTGAAGATACAGATAAGCCATCCTCGAGGATCCCTGATCAAAACTTTGGTGGGGGTAATTTGAAAATTGACATATCAGAAGAACTTTCCCGGATTGCTGATTTGGAAACACGGTTCAAGTGCTCAAAGCAAGAGGTTGAAAGAGCTATTGTATCCTGTGAGGGTGACCTTCAGAAGGCTGCTGAAAGCTTAAGAGCGTCAAAGCAAGACCCACCCTCTGTATCACCTAAGCCTGAAGAAATTGGTGATCCTCCAACAGTTACTAATGGCAAGCTTCCCATTGCTGTTAGCCAGAACTTGAGGCCACAAACAAAACCTAGTCCTCCTCCAACTATCCAACAAAGAAGAGACGACAAAGACTTTAATTACACAAAACAAGCAGCTGCAGTTGGAGGGTCTTTAGAATCTGCAAGTAAAACTATGCAGCCTCTGAAGAGAGGACAGCCAAAGTTGGAGTGGATGAAACCCCAACCGACACCAGTTCCGGCTGAGAGAAGGTGGACAAATTCAGGATCAAATCCTTCAGTTTCCTATTCTTTGGCATCACCTTTGCAGGTATCAACTCCACCAGCTAAGATGGAAACTCGTTATGTAGCTTTAGGGGGTGAGATGAAGAACCTTCCGCCTTTAACAGTAAGGGAACCGGTTATTATGATGCAGCGCCCTCAATCTGTCAATATAAAGCAGGTCCCTGCCACTAGTATGAGCTCATCGCCTCCTGGATCTGCTGCCAGTTGGTATCCTTCTACTAGTGTCGAAACGATGAGGTCCAATGGTTTTATTCCCCACATGCCTAGCAATAGAAGCCTCAGCCCTAGTAATTTGAGTTCAAATCAGATGTATCACCAGTTTCAGTATCAACAACAACAGCAGCTGCAGCAGTTTGTTCCTGGAAGCAGCACAGCTGAATCCCCTGGAGCAAGCCGAGGTAATAATCTATGGAGTAGGGCAGGTGCATCTCCAACACTTGGTGCTGCTTCCTCCCTCGGACTTTTCTCAGGGTTAGGTTCAGTTTGTTCATCAGGGGCAGCTTCTCTGGCAGACTGGAACGCTGGTGGAGGCTCATCTGGACAAATAGATTACACCAACATTGACTGGAGTTTGGATAGAGGTCTGTCTGCACCAAGGCCCAACGGGTTGTGGACAGGACTGCCTACTACCATGAAGAGCAATCCCAACTTTTATGATTCAAAGCCTACTGGTTTGGGTGCTCAGCCTGGAATGAGAGTGGCTTCCTCTAACATGAATGGCATTTCCTTTGTGGGACTGCAGGATGGAGCTGCTAATGTTGAAGCATCAGCCGCGGTCTCCCGAGAGTGGACTTCGCCATTTGAAGGAGAGGATCTTTTTAGTTTACCCAGACAGTTTGTTTCTTCTTCTCTGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

661

Amino Acids

71.14

Weight (kDa)

8.62

Isoelectric Point (pI)

58.19

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
UBA_7 PF22562 162 - 204 7.2e-08 UBA-like domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1538
AbsI CCTCGAGG 1 cut(s) 622
Acc36I ACCTGC 3 cut(s) 1141, 1273, 1538
AccB7I CCANNNNNTGG 1 cut(s) 1565
AccBSI CCGCTC 1 cut(s) 427
AccII CGCG 1 cut(s) 1901
AciI CCGC 5 cut(s) 205, 427, 1220, 1899, 1901
AclWI GGATC 6 cut(s) 622, 635, 839, 1117, 1327, 1947
AcsI RAATTY 1 cut(s) 1102
AcuI CTGAAG 4 cut(s) 752, 852, 1049, 1104
AdeI CACNNNGTG 1 cut(s) 1568
AfiI CCNNNNNNNGG 7 cut(s) 80, 134, 235, 772, 1565, 1914, 1931
AflII CTTAAG 1 cut(s) 787
AgeI ACCGGT 1 cut(s) 1240
AhlI ACTAGT 2 cut(s) 1295, 1346
AjnI CCWGG 5 cut(s) 355, 1315, 1486, 1510, 1813
AloI GAACNNNNNNTCC 2 cut(s) 695, 727
Alw21I GWGCWC 4 cut(s) 436, 722, 1307, 1810
Alw26I GTCTC 3 cut(s) 9, 939, 1909
AlwI GGATC 6 cut(s) 622, 635, 839, 1117, 1327, 1947
AlwNI CAGNNNCTG 3 cut(s) 362, 1027, 1471
Ama87I CYCGRG 2 cut(s) 622, 1908
AoxI GGCC 3 cut(s) 82, 899, 1724
ApaI GGGCCC 1 cut(s) 86
ApoI RAATTY 1 cut(s) 1102
AsiGI ACCGGT 1 cut(s) 1240
AspLEI GCGC 1 cut(s) 1260
AspS9I GGNCC 6 cut(s) 82, 83, 106, 1285, 1365, 1725
AsuC2I CCSGG 1 cut(s) 688
AsuHPI GGTGA 9 cut(s) 153, 308, 611, 773, 813, 854, 1134, 1214, 1433
AvaI CYCGRG 2 cut(s) 622, 1908
AvaII GGWCC 3 cut(s) 106, 1285, 1365
BaeGI GKGCMC 1 cut(s) 86
BamHI GGATCC 1 cut(s) 627
BanII GRGCYC 4 cut(s) 86, 242, 436, 1307
BbsI GAAGAC 1 cut(s) 312
Bbv12I GWGCWC 4 cut(s) 436, 722, 1307, 1810
BbvCI CCTCAGC 1 cut(s) 1406
BccI CCATC 3 cut(s) 625, 1168, 1865
BciT130I CCWGG 5 cut(s) 357, 1317, 1488, 1512, 1815
BciVI GTATCC 2 cut(s) 760, 1347
BclI TGATCA 1 cut(s) 634
BcnI CCSGG 1 cut(s) 688
BcoDI GTCTC 3 cut(s) 9, 939, 1909
BcuI ACTAGT 2 cut(s) 1295, 1346
BfaI CTAG 6 cut(s) 114, 915, 1296, 1347, 1392, 1413
BfmI CTRYAG 5 cut(s) 249, 981, 1472, 1865, 1979
BfoI RGCGCY 1 cut(s) 1261
BfrI CTTAAG 1 cut(s) 787
BfuAI ACCTGC 3 cut(s) 1141, 1273, 1538
BfuI GTATCC 2 cut(s) 760, 1347
BglII AGATCT 1 cut(s) 20
BlpI GCTNAGC 1 cut(s) 1809
Bme1390I CCNGG 6 cut(s) 357, 688, 1317, 1488, 1512, 1815
Bme18I GGWCC 3 cut(s) 106, 1285, 1365
BmeT110I CYCGRG 2 cut(s) 622, 1908
BmgT120I GGNCC 6 cut(s) 82, 83, 106, 1285, 1365, 1725
BmiI GGNNCC 7 cut(s) 84, 107, 108, 139, 629, 1239, 1287
BmrFI CCNGG 6 cut(s) 357, 688, 1317, 1488, 1512, 1815
BmsI GCATC 7 cut(s) 20, 418, 443, 1148, 1242, 1562, 1901
BpiI GAAGAC 1 cut(s) 312
BpmI CTGGAG 2 cut(s) 1533, 1714
Bpu10I CCTNAGC 3 cut(s) 435, 825, 1406
Bpu1102I GCTNAGC 1 cut(s) 1809
BpuEI CTTGAG 2 cut(s) 503, 916
BpuMI CCSGG 1 cut(s) 688
BsaI GGTCTC 1 cut(s) 1909
BsaJI CCNNGG 7 cut(s) 355, 537, 1510, 1522, 1582, 1721, 1899
BsaWI WCCGGW 1 cut(s) 1240
Bsc4I CCNNNNNNNGG 7 cut(s) 80, 134, 235, 772, 1565, 1914, 1931
Bse118I RCCGGY 1 cut(s) 1240
Bse1I ACTGG 6 cut(s) 1076, 1329, 1444, 1646, 1697, 1801
Bse3DI GCAATG 2 cut(s) 516, 876
BseBI CCWGG 5 cut(s) 357, 1317, 1488, 1512, 1815
BseDI CCNNGG 7 cut(s) 355, 537, 1510, 1522, 1582, 1721, 1899
BseGI GGATG 3 cut(s) 617, 1062, 1876
BseLI CCNNNNNNNGG 7 cut(s) 80, 134, 235, 772, 1565, 1914, 1931
BseMI GCAATG 2 cut(s) 516, 876
BseMII CTCAG 5 cut(s) 449, 1077, 1420, 1608, 1823
BseNI ACTGG 6 cut(s) 1076, 1329, 1444, 1646, 1697, 1801
BseRI GAGGAG 1 cut(s) 912
BseSI GKGCMC 1 cut(s) 86
BseYI CCCAGC 1 cut(s) 109
BsgI GTGCAG 1 cut(s) 1701
Bsh1236I CGCG 1 cut(s) 1901
BshFI GGCC 3 cut(s) 84, 901, 1726
BshTI ACCGGT 1 cut(s) 1240
BsiHKAI GWGCWC 4 cut(s) 436, 722, 1307, 1810
BsiHKCI CYCGRG 2 cut(s) 622, 1908
BsiSI CCGG 3 cut(s) 688, 1082, 1241
BslFI GGGAC 4 cut(s) 92, 338, 1271, 1875
BslI CCNNNNNNNGG 7 cut(s) 80, 134, 235, 772, 1565, 1914, 1931
BsmAI GTCTC 3 cut(s) 9, 939, 1909
BsmBI CGTCTC 1 cut(s) 939
BsmFI GGGAC 4 cut(s) 92, 338, 1271, 1875
BsnI GGCC 3 cut(s) 84, 901, 1726
Bso31I GGTCTC 1 cut(s) 1909
BsoBI CYCGRG 2 cut(s) 622, 1908
Bsp120I GGGCCC 1 cut(s) 82
Bsp1286I GDGCHC 6 cut(s) 86, 242, 436, 722, 1307, 1810
Bsp143I GATC 7 cut(s) 20, 627, 634, 844, 1109, 1319, 1939
Bsp1720I GCTNAGC 1 cut(s) 1809
Bsp19I CCATGG 1 cut(s) 537
BspACI CCGC 5 cut(s) 205, 427, 1220, 1899, 1901
BspANI GGCC 3 cut(s) 84, 901, 1726
BspCNI CTCAG 5 cut(s) 448, 1078, 1419, 1607, 1822
BspFNI CGCG 1 cut(s) 1901
BspLI GGNNCC 7 cut(s) 84, 107, 108, 139, 629, 1239, 1287
BspMAI CTGCAG 3 cut(s) 985, 1476, 1869
BspMI ACCTGC 3 cut(s) 1141, 1273, 1538
BspPI GGATC 6 cut(s) 622, 635, 839, 1117, 1327, 1947
BspQI GCTCTTC 1 cut(s) 1757
BspTI CTTAAG 1 cut(s) 787
BspTNI GGTCTC 1 cut(s) 1909
BsrBI CCGCTC 1 cut(s) 427
BsrDI GCAATG 2 cut(s) 516, 876
BsrFI RCCGGY 1 cut(s) 1240
BsrI ACTGG 6 cut(s) 1076, 1329, 1444, 1646, 1697, 1801
BssAI RCCGGY 1 cut(s) 1240
BssECI CCNNGG 7 cut(s) 355, 537, 1510, 1522, 1582, 1721, 1899
BssMI GATC 7 cut(s) 20, 627, 634, 844, 1109, 1319, 1939
BssT1I CCWWGG 2 cut(s) 537, 1721
Bst2UI CCWGG 5 cut(s) 357, 1317, 1488, 1512, 1815
Bst4CI ACNGT 5 cut(s) 191, 711, 856, 1231, 1962
Bst6I CTCTTC 4 cut(s) 189, 937, 1025, 1757
BstAFI CTTAAG 1 cut(s) 787
BstC8I GCNNGC 3 cut(s) 432, 869, 1519
BstDEI CTNAG 9 cut(s) 24, 30, 435, 825, 1086, 1170, 1406, 1594, 1809
BstDSI CCRYGG 2 cut(s) 537, 1899
BstEII GGTNACC 1 cut(s) 761
BstENI CCTNNNNNAGG 1 cut(s) 770
BstF5I GGATG 3 cut(s) 617, 1062, 1876
BstFNI CGCG 1 cut(s) 1901
BstH2I RGCGCY 1 cut(s) 1261
BstHHI GCGC 1 cut(s) 1260
BstKTI GATC 7 cut(s) 23, 630, 637, 847, 1112, 1322, 1942
BstMAI GTCTC 3 cut(s) 9, 939, 1909
BstMBI GATC 7 cut(s) 20, 627, 634, 844, 1109, 1319, 1939
BstMWI GCNNNNNNNGC 5 cut(s) 539, 1401, 1474, 1634, 1898
BstNI CCWGG 5 cut(s) 357, 1317, 1488, 1512, 1815
BstNSI RCATGY 1 cut(s) 1390
BstPI GGTNACC 1 cut(s) 761
BstSCI CCNGG 6 cut(s) 355, 686, 1315, 1486, 1510, 1813
BstSFI CTRYAG 5 cut(s) 249, 981, 1472, 1865, 1979
BstSLI GKGCMC 1 cut(s) 86
BstUI CGCG 1 cut(s) 1901
BstV2I GAAGAC 1 cut(s) 312
BstX2I RGATCY 4 cut(s) 20, 627, 1319, 1939
BstYI RGATCY 4 cut(s) 20, 627, 1319, 1939
BsuI GTATCC 2 cut(s) 760, 1347
BsuRI GGCC 3 cut(s) 84, 901, 1726
BtgI CCRYGG 2 cut(s) 537, 1899
BtgZI GCGATG 1 cut(s) 1293
BtsCI GGATG 3 cut(s) 617, 1062, 1876
BtsI GCAGTG 1 cut(s) 463
BtsIMutI CAGTG 1 cut(s) 463
BveI ACCTGC 3 cut(s) 1141, 1273, 1538
Cac8I GCNNGC 3 cut(s) 432, 869, 1519
CaiI CAGNNNCTG 3 cut(s) 362, 1027, 1471
CfoI GCGC 1 cut(s) 1260
Cfr10I RCCGGY 1 cut(s) 1240
Cfr13I GGNCC 6 cut(s) 82, 83, 106, 1285, 1365, 1725
Cfr42I CCGCGG 1 cut(s) 1902
CseI GACGC 1 cut(s) 783
CspAI ACCGGT 1 cut(s) 1240
CviAII CATG 6 cut(s) 446, 469, 538, 1387, 1759, 1840
DdeI CTNAG 9 cut(s) 24, 30, 435, 825, 1086, 1170, 1406, 1594, 1809
DpnI GATC 7 cut(s) 22, 629, 636, 846, 1111, 1321, 1941
DpnII GATC 7 cut(s) 20, 627, 634, 844, 1109, 1319, 1939
DraI TTTAAA 1 cut(s) 69
DraIII CACNNNGTG 1 cut(s) 1568
Eam1104I CTCTTC 4 cut(s) 189, 937, 1025, 1757
EarI CTCTTC 4 cut(s) 189, 937, 1025, 1757
EciI GGCGGA 1 cut(s) 1209
Ecl136II GAGCTC 2 cut(s) 434, 1305
Eco130I CCWWGG 2 cut(s) 537, 1721
Eco24I GRGCYC 4 cut(s) 86, 242, 436, 1307
Eco31I GGTCTC 1 cut(s) 1909
Eco47I GGWCC 3 cut(s) 106, 1285, 1365
Eco53kI GAGCTC 2 cut(s) 434, 1305
Eco57I CTGAAG 4 cut(s) 752, 852, 1049, 1104
Eco88I CYCGRG 2 cut(s) 622, 1908
Eco91I GGTNACC 1 cut(s) 761
EcoICRI GAGCTC 2 cut(s) 434, 1305
EcoNI CCTNNNNNAGG 1 cut(s) 770
EcoO109I RGGNCCY 3 cut(s) 83, 106, 1285
EcoO65I GGTNACC 1 cut(s) 761
EcoRII CCWGG 5 cut(s) 355, 1315, 1486, 1510, 1813
EcoT14I CCWWGG 2 cut(s) 537, 1721
EcoT38I GRGCYC 4 cut(s) 86, 242, 436, 1307
ErhI CCWWGG 2 cut(s) 537, 1721
Esp3I CGTCTC 1 cut(s) 939
FaeI CATG 6 cut(s) 449, 472, 541, 1390, 1762, 1843
FaqI GGGAC 4 cut(s) 92, 338, 1271, 1875
FatI CATG 6 cut(s) 445, 468, 537, 1386, 1758, 1839
FbaI TGATCA 1 cut(s) 634
FokI GGATG 3 cut(s) 604, 1069, 1883
FriOI GRGCYC 4 cut(s) 86, 242, 436, 1307
FspBI CTAG 6 cut(s) 114, 915, 1296, 1347, 1392, 1413
GlaI GCGC 1 cut(s) 1259
GsaI CCCAGC 1 cut(s) 113
GsuI CTGGAG 2 cut(s) 1533, 1714
HaeII RGCGCY 1 cut(s) 1261
HaeIII GGCC 3 cut(s) 84, 901, 1726
HapII CCGG 3 cut(s) 688, 1082, 1241
HgaI GACGC 1 cut(s) 783
HhaI GCGC 1 cut(s) 1260
Hin1II CATG 6 cut(s) 449, 472, 541, 1390, 1762, 1843
Hin6I GCGC 1 cut(s) 1258
HinP1I GCGC 1 cut(s) 1258
HindIII AAGCTT 3 cut(s) 479, 784, 869
HinfI GANTC 6 cut(s) 266, 299, 572, 1001, 1505, 1784
HpaII CCGG 3 cut(s) 688, 1082, 1241
HphI GGTGA 9 cut(s) 153, 308, 611, 773, 813, 854, 1134, 1214, 1433
Hpy166II GTNNAC 4 cut(s) 1098, 1740, 1917, 1952
Hpy188I TCNGA 7 cut(s) 304, 393, 676, 771, 1029, 1434, 1586
Hpy188III TCNNGA 6 cut(s) 18, 437, 474, 1107, 1665, 1908
Hpy8I GTNNAC 4 cut(s) 1098, 1740, 1917, 1952
HpyCH4III ACNGT 5 cut(s) 191, 711, 856, 1231, 1962
HpyF10VI GCNNNNNNNGC 5 cut(s) 539, 1401, 1474, 1634, 1898
HpyF3I CTNAG 9 cut(s) 24, 30, 435, 825, 1086, 1170, 1406, 1594, 1809
Hsp92II CATG 6 cut(s) 449, 472, 541, 1390, 1762, 1843
HspAI GCGC 1 cut(s) 1258
KflI GGGWCCC 1 cut(s) 106
Ksp22I TGATCA 1 cut(s) 634
KspI CCGCGG 1 cut(s) 1902
Kzo9I GATC 7 cut(s) 20, 627, 634, 844, 1109, 1319, 1939
LguI GCTCTTC 1 cut(s) 1757
LmnI GCTCC 3 cut(s) 359, 1514, 1874
LweI GCATC 7 cut(s) 20, 418, 443, 1148, 1242, 1562, 1901
MaeI CTAG 6 cut(s) 114, 915, 1296, 1347, 1392, 1413
MaeIII GTNAC 2 cut(s) 761, 856
MalI GATC 7 cut(s) 22, 629, 636, 846, 1111, 1321, 1941
MbiI CCGCTC 1 cut(s) 427
MboI GATC 7 cut(s) 20, 627, 634, 844, 1109, 1319, 1939
MflI RGATCY 4 cut(s) 20, 627, 1319, 1939
MhlI GDGCHC 6 cut(s) 86, 242, 436, 722, 1307, 1810
MluCI AATT 7 cut(s) 155, 655, 663, 837, 961, 1102, 1417
MlyI GAGTC 1 cut(s) 308
MmeI TCCRAC 7 cut(s) 282, 875, 950, 958, 967, 1029, 1583
MseI TTAA 4 cut(s) 68, 788, 960, 1226
MslI CAYNNNNRTG 1 cut(s) 1298
MspA1I CMGCKG 4 cut(s) 980, 1471, 1502, 1901
MspCI CTTAAG 1 cut(s) 787
MspI CCGG 3 cut(s) 688, 1082, 1241
MspR9I CCNGG 6 cut(s) 357, 688, 1317, 1488, 1512, 1815
MvaI CCWGG 5 cut(s) 357, 1317, 1488, 1512, 1815
MvnI CGCG 1 cut(s) 1901
MwoI GCNNNNNNNGC 5 cut(s) 539, 1401, 1474, 1634, 1898
NciI CCSGG 1 cut(s) 688
NcoI CCATGG 1 cut(s) 537
NdeII GATC 7 cut(s) 20, 627, 634, 844, 1109, 1319, 1939
NlaIII CATG 6 cut(s) 449, 472, 541, 1390, 1762, 1843
NlaIV GGNNCC 7 cut(s) 84, 107, 108, 139, 629, 1239, 1287
NmeAIII GCCGAG 1 cut(s) 1547
NmuCI GTSAC 1 cut(s) 761
NspI RCATGY 1 cut(s) 1390
PaeR7I CTCGAG 1 cut(s) 622
PaqCI CACCTGC 1 cut(s) 1538
PciSI GCTCTTC 1 cut(s) 1757
PfeI GAWTC 5 cut(s) 266, 572, 1001, 1505, 1784
PflMI CCANNNNNTGG 1 cut(s) 1565
PfoI TCCNGGA 3 cut(s) 686, 1315, 1486
PinAI ACCGGT 1 cut(s) 1240
PleI GAGTC 1 cut(s) 307
PpsI GAGTC 1 cut(s) 307
PpuMI RGGWCCY 2 cut(s) 106, 1285
Psp124BI GAGCTC 2 cut(s) 436, 1307
Psp5II RGGWCCY 2 cut(s) 106, 1285
Psp6I CCWGG 5 cut(s) 355, 1315, 1486, 1510, 1813
PspEI GGTNACC 1 cut(s) 761
PspFI CCCAGC 1 cut(s) 109
PspGI CCWGG 5 cut(s) 355, 1315, 1486, 1510, 1813
PspN4I GGNNCC 7 cut(s) 84, 107, 108, 139, 629, 1239, 1287
PspOMI GGGCCC 1 cut(s) 82
PspPI GGNCC 6 cut(s) 82, 83, 106, 1285, 1365, 1725
PspPPI RGGWCCY 2 cut(s) 106, 1285
PspXI VCTCGAGB 1 cut(s) 622
PsrI GAACNNNNNNTAC 4 cut(s) 130, 162, 1408, 1440
PstI CTGCAG 3 cut(s) 985, 1476, 1869
PstNI CAGNNNCTG 3 cut(s) 362, 1027, 1471
PsuI RGATCY 4 cut(s) 20, 627, 1319, 1939
PvuII CAGCTG 3 cut(s) 980, 1471, 1502
RseI CAYNNNNRTG 1 cut(s) 1298
SacI GAGCTC 2 cut(s) 436, 1307
SacII CCGCGG 1 cut(s) 1902
SapI GCTCTTC 1 cut(s) 1757
SaqAI TTAA 4 cut(s) 68, 788, 960, 1226
Sau3AI GATC 7 cut(s) 20, 627, 634, 844, 1109, 1319, 1939
Sau96I GGNCC 6 cut(s) 82, 83, 106, 1285, 1365, 1725
SchI GAGTC 1 cut(s) 308
ScrFI CCNGG 6 cut(s) 357, 688, 1317, 1488, 1512, 1815
SduI GDGCHC 6 cut(s) 86, 242, 436, 722, 1307, 1810
SfaNI GCATC 7 cut(s) 20, 418, 443, 1148, 1242, 1562, 1901
SfcI CTRYAG 5 cut(s) 249, 981, 1472, 1865, 1979
Sfr274I CTCGAG 1 cut(s) 622
Sfr303I CCGCGG 1 cut(s) 1902
SgrBI CCGCGG 1 cut(s) 1902
SinI GGWCC 3 cut(s) 106, 1285, 1365
SlaI CTCGAG 1 cut(s) 622
SmiMI CAYNNNNRTG 1 cut(s) 1298
SmlI CTYRAG 4 cut(s) 482, 622, 787, 895
SmoI CTYRAG 4 cut(s) 482, 622, 787, 895
SpeI ACTAGT 2 cut(s) 1295, 1346
Sse9I AATT 7 cut(s) 155, 655, 663, 837, 961, 1102, 1417
SsiI CCGC 5 cut(s) 205, 427, 1220, 1899, 1901
SspMI CTAG 6 cut(s) 114, 915, 1296, 1347, 1392, 1413
SstI GAGCTC 2 cut(s) 436, 1307
StyD4I CCNGG 6 cut(s) 355, 686, 1315, 1486, 1510, 1813
StyI CCWWGG 2 cut(s) 537, 1721
TaaI ACNGT 5 cut(s) 191, 711, 856, 1231, 1962
TaqI TCGA 2 cut(s) 623, 1353
TasI AATT 7 cut(s) 155, 655, 663, 837, 961, 1102, 1417
TauI GCSGC 2 cut(s) 430, 1901
TfiI GAWTC 5 cut(s) 266, 572, 1001, 1505, 1784
Tru1I TTAA 4 cut(s) 68, 788, 960, 1226
Tru9I TTAA 4 cut(s) 68, 788, 960, 1226
TscAI CASTG 1 cut(s) 463
TseFI GTSAC 1 cut(s) 761
Tsp45I GTSAC 1 cut(s) 761
TspDTI ATGAA 8 cut(s) 231, 462, 570, 1073, 1223, 1605, 1775, 1856
TspGWI ACGGA 1 cut(s) 377
TspRI CASTG 1 cut(s) 463
Van91I CCANNNNNTGG 1 cut(s) 1565
Vha464I CTTAAG 1 cut(s) 787
VpaK11BI GGWCC 3 cut(s) 106, 1285, 1365
XagI CCTNNNNNAGG 1 cut(s) 770
XapI RAATTY 1 cut(s) 1102
XceI RCATGY 1 cut(s) 1390
XcmI CCANNNNNNNNNTGG 1 cut(s) 1050
XhoI CTCGAG 1 cut(s) 622
XspI CTAG 6 cut(s) 114, 915, 1296, 1347, 1392, 1413
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.