MD00G1091100.v1.1

Ubiquitin associated domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr00
OG0009633
Physical Location & Seq
Reverse (-)
18908601 .. 18911541
2941 bp
Loading structure...
UTR
Exon/CDS
Intron
MD00G1091100.v1.1.491

Sequence Viewer

Length: 1971 bp
ATGTCTCCAGCATCGTCCAGATCTAAGTCTAAGGACAAGAAGGCTGTCAAAGAAACCCATACACCTTTAAAGCCTTCAACGGGCCCTGCTAATGTAAGTAGTGGGGTCCCAGCTAGTGCATACAATCCACTTTTAGGAACCTTCCATACCCTTGAATTATCACCAACATCTTCTGTGTCGCCTCTTCACAGTAATAGTCGTTTCCGCAACATAGATGAAACAGATGACCATTCTGGGGGCTCCATTGCTACAGGAGTGGAGTATGATTCTGTTTCCAATAATGGTAGCTGGTCAGGTGAGTCGGAAGACCATAAAGACAAGACACCTAATCCTCCTACCAAGCAGGAAGCAGTCCCAGGAGTTGACAATGACAAGCGAGAGAAAATCCGTCAGAAGAATGAGAGGAAGCATCAGCGACAGAAAGAGCGGCGAGCTCAGGAGTTGCATGAACGATGCAGTGGTTATCTCATGTCAAGAAAGCTTGAGGCACTTGCTCAACAGCTTGTGGCAATGGGTTTTTCACAAGAACGGGCGACCATGGCTCTCATACTGAATGAAGGCAGAGTAGAGGAATCAGTAGCTTGGCTTTTTGAAAGTGGTGAAGATACTGATAAGCCAAGGGATCAAAACTTTGGTGGGGGTAATTTGAAAATTGACATATCAGAAGAACTTTCCCGGATTGCAGATTTGGAAACACGGTTCAAGTGCTCAAAGCAAGACGTTGAAAGAGCTATTGTATCCTGTGAAGGTGACCTTCAGAAGGCTGCTGAAAGCTTAATAGCGTCAAAGCAAGACCCACCCTCTGTATCACCTAAGCCTGAAGAAATTGGTGATCCTCCAACAGGTACCAATGGCAAGCTTCCCGTTGCTGTTAGCCAGAACTTGAGGCCACAAACAAAACCTAGTCCTCCTCCAACTATACAACAAAGAAGAGACGACAAAGTCTTTAATTACACAAAACAAGCAGCTGCAGTTGGAGGGTCTTTAGAATCTGCAAGTAAAACTATGCAGCCTCTGAAGGGAGGACAACCAAAGTTGGAGTGGACGAAACCCCAACCGACACCAGTTCTGGCTGAGAGAAGGTGGACAAATTCAGGATCAAATCCTTCAGTTTCCTATTCTTTGGCATCACCTTTGCAGGTATCAACTCCACCAGCTAAGATGGAAACTCGTTATATAGCTTTAGGGGGTGAGATGAAGAACCTTCCGCCTGTAACAGTAAGGGAACCGGTTATTATGATGCAGTGCCCTCAATCTGTCAATATAAAGCAGGTCCCTGCCATTAGTATGAGCTCATCGCCTCCTGGATCCGCTGCCAGTTGGTATCCTTCTACTAGCATCGAAATGATGAGGTCCAATGGTTTTATGCCCCACATGCCTAGCAATAGAAGCCTCAGCCCTAGTAATTTGAGTTCAAATCAGATGTATCACCAGTTTCAGTATCAACAACAACAGCAGCAGCAGCAGTTTGTTCCTGGAAGTAGCGCAGCTGAATCCCCTGGAGCAAGCCGAGGTAATAATCTATGGAGTAGGGCAGGTGCATCTCCAACACTTGGTGCTGCTTCCTCCCTTGGACTTTTCTCAGGGTTAGGTTCAGTTGGCTCATCAGGGGCAGCTTCTCCGGCAGACTGGAACGCTGGTGGCGGCTCATCTGGACAAATAGATTACACTAACATTGACTGGAGTTTGGATAGAGGTCTGTCTGCACCAAGGCCCAAGGGATTGTGGACAGGACTGCCTTCTATCATGAAGAGCAATCTCAACTTTTATGATTCAAAGCCTACTGGTTTGGGTGCTCAGCCTGGAATGGGAGCGGCTTCCTCTAACATGAATGACATTTCTTTTGTGGGACTACAGGATGGAGCTGCTAATGTTGAAGCATCAGCCGCAGCCTCCCGAGAGTGGACTTCGCCATTTGAAGGAGAGGATATTTTTAGTTTACCCAGACAGTTTGTTTCTTCTTCTCTGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

657

Amino Acids

70.49

Weight (kDa)

7.66

Isoelectric Point (pI)

59.16

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
UBA_7 PF22562 162 - 204 3.7e-08 UBA-like domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1526
AasI GACNNNNNNGTC 1 cut(s) 941
Acc36I ACCTGC 3 cut(s) 1129, 1261, 1526
Acc65I GGTACC 1 cut(s) 845
AccB1I GGYRCC 1 cut(s) 845
AccB7I CCANNNNNTGG 1 cut(s) 1553
AccBSI CCGCTC 2 cut(s) 427, 1814
AciI CCGC 7 cut(s) 205, 427, 1208, 1311, 1644, 1814, 1887
AclWI GGATC 5 cut(s) 630, 827, 1105, 1302, 1315
AcsI RAATTY 1 cut(s) 1090
AcuI CTGAAG 4 cut(s) 740, 840, 1037, 1092
AdeI CACNNNGTG 1 cut(s) 1556
AfaI GTAC 1 cut(s) 847
AgeI ACCGGT 1 cut(s) 1228
AjnI CCWGG 5 cut(s) 355, 1303, 1474, 1498, 1801
AloI GAACNNNNNNTCC 2 cut(s) 683, 715
Alw21I GWGCWC 4 cut(s) 436, 710, 1295, 1798
Alw26I GTCTC 2 cut(s) 9, 927
AlwI GGATC 5 cut(s) 630, 827, 1105, 1302, 1315
AlwNI CAGNNNCTG 1 cut(s) 1015
Ama87I CYCGRG 1 cut(s) 1896
AoxI GGCC 3 cut(s) 82, 887, 1712
ApaI GGGCCC 1 cut(s) 86
ApoI RAATTY 1 cut(s) 1090
ArsI GACNNNNNNTTYG 2 cut(s) 1826, 1858
AsiGI ACCGGT 1 cut(s) 1228
Asp718I GGTACC 1 cut(s) 845
AspLEI GCGC 1 cut(s) 1487
AspS9I GGNCC 6 cut(s) 82, 83, 106, 1273, 1353, 1713
AsuC2I CCSGG 1 cut(s) 676
AsuHPI GGTGA 9 cut(s) 153, 308, 611, 761, 801, 842, 1122, 1202, 1421
AvaI CYCGRG 1 cut(s) 1896
AvaII GGWCC 3 cut(s) 106, 1273, 1353
BaeGI GKGCMC 2 cut(s) 86, 1250
BamHI GGATCC 1 cut(s) 1307
BanI GGYRCC 1 cut(s) 845
BanII GRGCYC 4 cut(s) 86, 242, 436, 1295
BbsI GAAGAC 1 cut(s) 312
Bbv12I GWGCWC 4 cut(s) 436, 710, 1295, 1798
BbvCI CCTCAGC 1 cut(s) 1394
BccI CCATC 2 cut(s) 1156, 1853
BciT130I CCWGG 5 cut(s) 357, 1305, 1476, 1500, 1803
BciVI GTATCC 2 cut(s) 748, 1335
BcnI CCSGG 1 cut(s) 676
BcoDI GTCTC 2 cut(s) 9, 927
BfaI CTAG 5 cut(s) 114, 903, 1335, 1380, 1401
BfmI CTRYAG 4 cut(s) 249, 969, 1853, 1967
BfuAI ACCTGC 3 cut(s) 1129, 1261, 1526
BfuI GTATCC 2 cut(s) 748, 1335
BglII AGATCT 1 cut(s) 20
BlpI GCTNAGC 1 cut(s) 1797
Bme1390I CCNGG 6 cut(s) 357, 676, 1305, 1476, 1500, 1803
Bme18I GGWCC 3 cut(s) 106, 1273, 1353
BmeT110I CYCGRG 1 cut(s) 1896
BmgT120I GGNCC 6 cut(s) 82, 83, 106, 1273, 1353, 1713
BmiI GGNNCC 9 cut(s) 84, 107, 108, 139, 241, 847, 1227, 1275, 1309
BmrFI CCNGG 6 cut(s) 357, 676, 1305, 1476, 1500, 1803
BmsI GCATC 8 cut(s) 20, 418, 443, 1136, 1230, 1347, 1550, 1889
BpiI GAAGAC 1 cut(s) 312
BpmI CTGGAG 2 cut(s) 1521, 1702
Bpu10I CCTNAGC 3 cut(s) 435, 813, 1394
Bpu1102I GCTNAGC 1 cut(s) 1797
BpuEI CTTGAG 2 cut(s) 503, 904
BpuMI CCSGG 1 cut(s) 676
BsaJI CCNNGG 8 cut(s) 355, 537, 617, 1498, 1510, 1570, 1709, 1716
BsaWI WCCGGW 1 cut(s) 1228
Bse118I RCCGGY 1 cut(s) 1228
Bse1I ACTGG 6 cut(s) 1064, 1317, 1432, 1634, 1685, 1789
Bse3DI GCAATG 2 cut(s) 243, 516
BseBI CCWGG 5 cut(s) 357, 1305, 1476, 1500, 1803
BseDI CCNNGG 8 cut(s) 355, 537, 617, 1498, 1510, 1570, 1709, 1716
BseGI GGATG 1 cut(s) 1864
BseMI GCAATG 2 cut(s) 243, 516
BseMII CTCAG 5 cut(s) 449, 1065, 1408, 1596, 1811
BseNI ACTGG 6 cut(s) 1064, 1317, 1432, 1634, 1685, 1789
BseRI GAGGAG 1 cut(s) 900
BseSI GKGCMC 2 cut(s) 86, 1250
BseYI CCCAGC 1 cut(s) 109
BsgI GTGCAG 1 cut(s) 1689
BshFI GGCC 3 cut(s) 84, 889, 1714
BshNI GGYRCC 1 cut(s) 845
BshTI ACCGGT 1 cut(s) 1228
BsiHKAI GWGCWC 4 cut(s) 436, 710, 1295, 1798
BsiHKCI CYCGRG 1 cut(s) 1896
BsiSI CCGG 3 cut(s) 676, 1229, 1622
BslFI GGGAC 4 cut(s) 92, 338, 1259, 1863
BsmAI GTCTC 2 cut(s) 9, 927
BsmBI CGTCTC 1 cut(s) 927
BsmFI GGGAC 4 cut(s) 92, 338, 1259, 1863
BsnI GGCC 3 cut(s) 84, 889, 1714
BsoBI CYCGRG 1 cut(s) 1896
Bsp120I GGGCCC 1 cut(s) 82
Bsp1286I GDGCHC 7 cut(s) 86, 242, 436, 710, 1250, 1295, 1798
Bsp143I GATC 5 cut(s) 20, 622, 832, 1097, 1307
Bsp1720I GCTNAGC 1 cut(s) 1797
Bsp19I CCATGG 1 cut(s) 537
BspACI CCGC 7 cut(s) 205, 427, 1208, 1311, 1644, 1814, 1887
BspANI GGCC 3 cut(s) 84, 889, 1714
BspCNI CTCAG 5 cut(s) 448, 1066, 1407, 1595, 1810
BspHI TCATGA 1 cut(s) 1746
BspLI GGNNCC 9 cut(s) 84, 107, 108, 139, 241, 847, 1227, 1275, 1309
BspMAI CTGCAG 1 cut(s) 973
BspMI ACCTGC 3 cut(s) 1129, 1261, 1526
BspPI GGATC 5 cut(s) 630, 827, 1105, 1302, 1315
BspQI GCTCTTC 1 cut(s) 1745
BspT107I GGYRCC 1 cut(s) 845
BsrBI CCGCTC 2 cut(s) 427, 1814
BsrDI GCAATG 2 cut(s) 243, 516
BsrFI RCCGGY 1 cut(s) 1228
BsrI ACTGG 6 cut(s) 1064, 1317, 1432, 1634, 1685, 1789
BssAI RCCGGY 1 cut(s) 1228
BssECI CCNNGG 8 cut(s) 355, 537, 617, 1498, 1510, 1570, 1709, 1716
BssMI GATC 5 cut(s) 20, 622, 832, 1097, 1307
BssT1I CCWWGG 5 cut(s) 537, 617, 1570, 1709, 1716
Bst2UI CCWGG 5 cut(s) 357, 1305, 1476, 1500, 1803
Bst4CI ACNGT 4 cut(s) 191, 699, 1219, 1950
Bst6I CTCTTC 3 cut(s) 189, 925, 1745
BstC8I GCNNGC 3 cut(s) 432, 857, 1507
BstDEI CTNAG 9 cut(s) 24, 30, 435, 813, 1074, 1158, 1394, 1582, 1797
BstDSI CCRYGG 1 cut(s) 537
BstEII GGTNACC 1 cut(s) 749
BstENI CCTNNNNNAGG 2 cut(s) 758, 840
BstF5I GGATG 1 cut(s) 1864
BstHHI GCGC 1 cut(s) 1487
BstKTI GATC 5 cut(s) 23, 625, 835, 1100, 1310
BstMAI GTCTC 2 cut(s) 9, 927
BstMBI GATC 5 cut(s) 20, 622, 832, 1097, 1307
BstMWI GCNNNNNNNGC 6 cut(s) 539, 1375, 1389, 1462, 1622, 1886
BstNI CCWGG 5 cut(s) 357, 1305, 1476, 1500, 1803
BstNSI RCATGY 1 cut(s) 1378
BstPI GGTNACC 1 cut(s) 749
BstSCI CCNGG 6 cut(s) 355, 674, 1303, 1474, 1498, 1801
BstSFI CTRYAG 4 cut(s) 249, 969, 1853, 1967
BstSLI GKGCMC 2 cut(s) 86, 1250
BstV2I GAAGAC 1 cut(s) 312
BstX2I RGATCY 2 cut(s) 20, 1307
BstYI RGATCY 2 cut(s) 20, 1307
BsuI GTATCC 2 cut(s) 748, 1335
BsuRI GGCC 3 cut(s) 84, 889, 1714
BtgI CCRYGG 1 cut(s) 537
BtgZI GCGATG 1 cut(s) 1281
BtsCI GGATG 1 cut(s) 1864
BtsI GCAGTG 2 cut(s) 463, 1250
BtsIMutI CAGTG 2 cut(s) 463, 1250
BveI ACCTGC 3 cut(s) 1129, 1261, 1526
Cac8I GCNNGC 3 cut(s) 432, 857, 1507
CaiI CAGNNNCTG 1 cut(s) 1015
CciI TCATGA 1 cut(s) 1746
CfoI GCGC 1 cut(s) 1487
Cfr10I RCCGGY 1 cut(s) 1228
Cfr13I GGNCC 6 cut(s) 82, 83, 106, 1273, 1353, 1713
CseI GACGC 1 cut(s) 771
Csp6I GTAC 1 cut(s) 846
CspAI ACCGGT 1 cut(s) 1228
CviAII CATG 6 cut(s) 446, 469, 538, 1375, 1747, 1828
CviQI GTAC 1 cut(s) 846
DdeI CTNAG 9 cut(s) 24, 30, 435, 813, 1074, 1158, 1394, 1582, 1797
DpnI GATC 5 cut(s) 22, 624, 834, 1099, 1309
DpnII GATC 5 cut(s) 20, 622, 832, 1097, 1307
DraI TTTAAA 1 cut(s) 69
DraIII CACNNNGTG 1 cut(s) 1556
DrdI GACNNNNNNGTC 1 cut(s) 941
DseDI GACNNNNNNGTC 1 cut(s) 941
Eam1104I CTCTTC 3 cut(s) 189, 925, 1745
EarI CTCTTC 3 cut(s) 189, 925, 1745
EciI GGCGGA 1 cut(s) 1197
Ecl136II GAGCTC 2 cut(s) 434, 1293
Eco130I CCWWGG 5 cut(s) 537, 617, 1570, 1709, 1716
Eco24I GRGCYC 4 cut(s) 86, 242, 436, 1295
Eco47I GGWCC 3 cut(s) 106, 1273, 1353
Eco53kI GAGCTC 2 cut(s) 434, 1293
Eco57I CTGAAG 4 cut(s) 740, 840, 1037, 1092
Eco88I CYCGRG 1 cut(s) 1896
Eco91I GGTNACC 1 cut(s) 749
EcoICRI GAGCTC 2 cut(s) 434, 1293
EcoNI CCTNNNNNAGG 2 cut(s) 758, 840
EcoO109I RGGNCCY 3 cut(s) 83, 106, 1273
EcoO65I GGTNACC 1 cut(s) 749
EcoRII CCWGG 5 cut(s) 355, 1303, 1474, 1498, 1801
EcoT14I CCWWGG 5 cut(s) 537, 617, 1570, 1709, 1716
EcoT38I GRGCYC 4 cut(s) 86, 242, 436, 1295
ErhI CCWWGG 5 cut(s) 537, 617, 1570, 1709, 1716
Esp3I CGTCTC 1 cut(s) 927
FaeI CATG 6 cut(s) 449, 472, 541, 1378, 1750, 1831
FalI AAGNNNNNCTT 2 cut(s) 738, 770
FaqI GGGAC 4 cut(s) 92, 338, 1259, 1863
FatI CATG 6 cut(s) 445, 468, 537, 1374, 1746, 1827
FokI GGATG 1 cut(s) 1871
FriOI GRGCYC 4 cut(s) 86, 242, 436, 1295
FspBI CTAG 5 cut(s) 114, 903, 1335, 1380, 1401
GlaI GCGC 1 cut(s) 1486
GsaI CCCAGC 1 cut(s) 113
GsuI CTGGAG 2 cut(s) 1521, 1702
HaeIII GGCC 3 cut(s) 84, 889, 1714
HapII CCGG 3 cut(s) 676, 1229, 1622
HgaI GACGC 1 cut(s) 771
HhaI GCGC 1 cut(s) 1487
Hin1II CATG 6 cut(s) 449, 472, 541, 1378, 1750, 1831
Hin6I GCGC 1 cut(s) 1485
HinP1I GCGC 1 cut(s) 1485
HincII GTYRAC 1 cut(s) 364
HindII GTYRAC 1 cut(s) 364
HindIII AAGCTT 3 cut(s) 479, 772, 857
HinfI GANTC 6 cut(s) 266, 299, 572, 989, 1493, 1772
HpaII CCGG 3 cut(s) 676, 1229, 1622
HphI GGTGA 9 cut(s) 153, 308, 611, 761, 801, 842, 1122, 1202, 1421
Hpy166II GTNNAC 6 cut(s) 364, 1044, 1086, 1728, 1905, 1940
Hpy188I TCNGA 6 cut(s) 304, 393, 664, 759, 1017, 1422
Hpy188III TCNNGA 7 cut(s) 18, 437, 474, 1095, 1653, 1747, 1896
Hpy8I GTNNAC 6 cut(s) 364, 1044, 1086, 1728, 1905, 1940
HpyCH4III ACNGT 4 cut(s) 191, 699, 1219, 1950
HpyCH4IV ACGT 1 cut(s) 720
HpyF10VI GCNNNNNNNGC 6 cut(s) 539, 1375, 1389, 1462, 1622, 1886
HpyF3I CTNAG 9 cut(s) 24, 30, 435, 813, 1074, 1158, 1394, 1582, 1797
HpySE526I ACGT 1 cut(s) 720
Hsp92II CATG 6 cut(s) 449, 472, 541, 1378, 1750, 1831
HspAI GCGC 1 cut(s) 1485
KflI GGGWCCC 1 cut(s) 106
KpnI GGTACC 1 cut(s) 849
Kzo9I GATC 5 cut(s) 20, 622, 832, 1097, 1307
LguI GCTCTTC 1 cut(s) 1745
LmnI GCTCC 4 cut(s) 245, 1502, 1811, 1862
LweI GCATC 8 cut(s) 20, 418, 443, 1136, 1230, 1347, 1550, 1889
MaeI CTAG 5 cut(s) 114, 903, 1335, 1380, 1401
MaeII ACGT 1 cut(s) 720
MaeIII GTNAC 2 cut(s) 749, 1213
MalI GATC 5 cut(s) 22, 624, 834, 1099, 1309
MbiI CCGCTC 2 cut(s) 427, 1814
MboI GATC 5 cut(s) 20, 622, 832, 1097, 1307
MflI RGATCY 2 cut(s) 20, 1307
MhlI GDGCHC 7 cut(s) 86, 242, 436, 710, 1250, 1295, 1798
MluCI AATT 7 cut(s) 155, 643, 651, 825, 949, 1090, 1405
MlyI GAGTC 1 cut(s) 308
MmeI TCCRAC 6 cut(s) 282, 863, 938, 955, 1017, 1571
MseI TTAA 3 cut(s) 68, 776, 948
MslI CAYNNNNRTG 2 cut(s) 1286, 1343
MspA1I CMGCKG 3 cut(s) 968, 1313, 1490
MspI CCGG 3 cut(s) 676, 1229, 1622
MspR9I CCNGG 6 cut(s) 357, 676, 1305, 1476, 1500, 1803
MvaI CCWGG 5 cut(s) 357, 1305, 1476, 1500, 1803
MwoI GCNNNNNNNGC 6 cut(s) 539, 1375, 1389, 1462, 1622, 1886
NciI CCSGG 1 cut(s) 676
NcoI CCATGG 1 cut(s) 537
NdeII GATC 5 cut(s) 20, 622, 832, 1097, 1307
NlaIII CATG 6 cut(s) 449, 472, 541, 1378, 1750, 1831
NlaIV GGNNCC 9 cut(s) 84, 107, 108, 139, 241, 847, 1227, 1275, 1309
NmeAIII GCCGAG 1 cut(s) 1535
NmuCI GTSAC 1 cut(s) 749
NspI RCATGY 1 cut(s) 1378
PagI TCATGA 1 cut(s) 1746
PaqCI CACCTGC 1 cut(s) 1526
PciSI GCTCTTC 1 cut(s) 1745
PfeI GAWTC 5 cut(s) 266, 572, 989, 1493, 1772
PflFI GACNNNGTC 1 cut(s) 941
PflMI CCANNNNNTGG 1 cut(s) 1553
PfoI TCCNGGA 3 cut(s) 674, 1303, 1474
PinAI ACCGGT 1 cut(s) 1228
PleI GAGTC 1 cut(s) 307
PpsI GAGTC 1 cut(s) 307
PpuMI RGGWCCY 2 cut(s) 106, 1273
Psp124BI GAGCTC 2 cut(s) 436, 1295
Psp5II RGGWCCY 2 cut(s) 106, 1273
Psp6I CCWGG 5 cut(s) 355, 1303, 1474, 1498, 1801
PspEI GGTNACC 1 cut(s) 749
PspFI CCCAGC 1 cut(s) 109
PspGI CCWGG 5 cut(s) 355, 1303, 1474, 1498, 1801
PspN4I GGNNCC 9 cut(s) 84, 107, 108, 139, 241, 847, 1227, 1275, 1309
PspOMI GGGCCC 1 cut(s) 82
PspPI GGNCC 6 cut(s) 82, 83, 106, 1273, 1353, 1713
PspPPI RGGWCCY 2 cut(s) 106, 1273
PsrI GAACNNNNNNTAC 4 cut(s) 130, 162, 1396, 1428
PstI CTGCAG 1 cut(s) 973
PstNI CAGNNNCTG 1 cut(s) 1015
PsuI RGATCY 2 cut(s) 20, 1307
PsyI GACNNNGTC 1 cut(s) 941
PvuII CAGCTG 2 cut(s) 968, 1490
RsaI GTAC 1 cut(s) 847
RsaNI GTAC 1 cut(s) 846
RseI CAYNNNNRTG 2 cut(s) 1286, 1343
SacI GAGCTC 2 cut(s) 436, 1295
SapI GCTCTTC 1 cut(s) 1745
SaqAI TTAA 3 cut(s) 68, 776, 948
Sau3AI GATC 5 cut(s) 20, 622, 832, 1097, 1307
Sau96I GGNCC 6 cut(s) 82, 83, 106, 1273, 1353, 1713
SchI GAGTC 1 cut(s) 308
ScrFI CCNGG 6 cut(s) 357, 676, 1305, 1476, 1500, 1803
SduI GDGCHC 7 cut(s) 86, 242, 436, 710, 1250, 1295, 1798
SfaNI GCATC 8 cut(s) 20, 418, 443, 1136, 1230, 1347, 1550, 1889
SfcI CTRYAG 4 cut(s) 249, 969, 1853, 1967
SinI GGWCC 3 cut(s) 106, 1273, 1353
SmiMI CAYNNNNRTG 2 cut(s) 1286, 1343
SmlI CTYRAG 2 cut(s) 482, 883
SmoI CTYRAG 2 cut(s) 482, 883
Sse9I AATT 7 cut(s) 155, 643, 651, 825, 949, 1090, 1405
SsiI CCGC 7 cut(s) 205, 427, 1208, 1311, 1644, 1814, 1887
SspMI CTAG 5 cut(s) 114, 903, 1335, 1380, 1401
SstI GAGCTC 2 cut(s) 436, 1295
StyD4I CCNGG 6 cut(s) 355, 674, 1303, 1474, 1498, 1801
StyI CCWWGG 5 cut(s) 537, 617, 1570, 1709, 1716
TaaI ACNGT 4 cut(s) 191, 699, 1219, 1950
TaiI ACGT 1 cut(s) 723
TaqI TCGA 1 cut(s) 1341
TasI AATT 7 cut(s) 155, 643, 651, 825, 949, 1090, 1405
TauI GCSGC 4 cut(s) 430, 1647, 1817, 1889
TfiI GAWTC 5 cut(s) 266, 572, 989, 1493, 1772
Tru1I TTAA 3 cut(s) 68, 776, 948
Tru9I TTAA 3 cut(s) 68, 776, 948
TscAI CASTG 2 cut(s) 463, 1250
TseFI GTSAC 1 cut(s) 749
Tsp45I GTSAC 1 cut(s) 749
TspDTI ATGAA 6 cut(s) 231, 462, 570, 1211, 1763, 1844
TspGWI ACGGA 1 cut(s) 377
TspRI CASTG 2 cut(s) 463, 1250
Tth111I GACNNNGTC 1 cut(s) 941
Van91I CCANNNNNTGG 1 cut(s) 1553
VpaK11BI GGWCC 3 cut(s) 106, 1273, 1353
XagI CCTNNNNNAGG 2 cut(s) 758, 840
XapI RAATTY 1 cut(s) 1090
XceI RCATGY 1 cut(s) 1378
XcmI CCANNNNNNNNNTGG 1 cut(s) 1038
XspI CTAG 5 cut(s) 114, 903, 1335, 1380, 1401
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.