Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb4

Orthogroup ID

OG0005804

Physical Location & Seq

Genomic Coordinates Reverse (-)

17887292 .. 17891583

Gene Structure 4292 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_4g14290.t6

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2097 bp

ATGCTCATATCTCTCAGACCCAAATCCCTCACCGCCCTCCCACCTTTCTCCTCTGCTTCACCTCTCAAATGGGTCTCCACAACCCCCACCCAAAAGCAAAACCCACCCCACCATCTCGGACTCTTCTTCGAACCCAGAACCCACCAATCCCACATCGACTACGAGCGCCATATAGTCTCCATTCTAAAATCCTGCGCTTCCCTTTCGGCCCTCGTCCTGGGCCAGCAACTCCACTCCCTTGTCCTCAAGTCCGGCCTCCTCTCCAACACCTTCATCCACAACAGCTTGACCAGCATGTACTCCAAATGCGGCTCCATTTCCGGAGCCGAAGCCCTCTTCAGGTCCTGCTCTGAGCTGGACCCGGTTTCCTGTAACATTATGCTTGCTGGGTATGTGAAATCTGGCGACTTGGACAATGCGCGCCAGCTGTTTGATAAAATGCCTCACAGAGGCTGCGTCTCGTATACTACTATGATTATGGGTCTTTCGAGAAATGGGAGCTGGAGGGAGGCTGTGGAGGTGTTTAGGGATATGAGGAACGCGGGTGTGGTGCCGAATGAGCTGACAATGGGGGCTGTGGTATCGATGTTCTCGCAGTTGGGTGGGATTTGGAATTGTCGGATGCTTCATGGTTTGGTGGTTAAGTTGCAGCTTGATGGGATGGTGCTTGTTTCGACGAATTTGGTGAAGGCGTATTGTGCTTGTAAGAGTGTGGGGGAAGCGAGAAGGTTGTTTGATGAGATGCCCGAGAGGAATGTTGTTACGTGGAATGTCATGTTGAATGGGTACTGCAAGGCTGGGCTTGTGCATCTGGCTAGAGAGGTCTTTGAGAGGATTGATGTGAAAGATGTGGTTTCGTGGGGTACAATGATTGATGGGTATGTGCAAGTGGAGTGGTTGAGTGAAGCTTTGATGATGTGTTGCTCAATGCTGCGTGCTGGGTTGGGTCCGAATGATGTTATGCTTGTTGATTTGATTTCAGCATGTGGGCGGTTGGAGGCAATTTGTGAGGGTTTGCAGTTTCATGGGAGAATTATCAAGGGGGGTTTTGACTGTTATGATTTCATACAGGCAACTATCATAAATTTTTATGCAGGTTGTGGGGAAATGATCCCTGCTCGTCTTCAGTTTGAAAAGAGCATCAAGGAGCATGTAGCATCTTGGAATGCTCTCCTTGCAGGATACATAAGAAATCAAATGATTGACCAAGCAAGTGAATTGTTTGATGAGATGCCTGAAAGGGATGTCTTTTCATGGAGTTGCATGATTTCTGGTTACACACAGACTGAGAAATCTGAATTGGCTTTGGAACTTTTCCAACGAATGGTATCTAGTGGGATACAGCCAAATGAGATTACAATGGTTAGTGTTTTATCTGCAATCGCTACTTTAGGCAGATGGAAAGAAGGAATATGGGCTCACGAATACATATGTGAAAATTCCATTCCTCTGAATGACAATTTAAGTGCAGCTATCATTGATATGTATGCCAAATGTGGGAGTATCAATACTGCCTTAGAGGTGTTCTATCAAATCCAAGACAAAACCTCTTCTGTCTCACCATGGAATGCCATTATATGTGGGTTGGCCATGCACGGACATGCACCAATGTCTCTTGAAATATTTTCGCACTTGCAAAGGCGTGATATCAAACTCAATTCAATAACATTCATTGGAGTCCTAGGTGCTTGTTGCCATGCTGGTTTGGTGGAGGTCGGGGAGATGTATTTTAAGAGCATGGAAACTGTATATCACATTCAACCAAACATCAAGCACTATGGTTGTATGGTGGATCTACTGGGTAGAGCTGGCAGAGTAGTAGATGCTGAGAAATTGATAAGAAGCATGCCCATGAAGGCTGATGTTGTGATATGGGGCACATTATTGGCCGCATGTACAACACATGGGAATCTAGAAATAGGACGAATGGCTGAAAAGAATCTGAAACTGTTGGATCCATCTCATGGGGCAAGTACAGTTCTCATGTCCAACCTACTTGCAGATGCAGGGATGTGGGAGAAATCCTCTTTGGAAAGGCAAGTAATTCAGAGCCTAAAACTAACAAGATCACCAGGGCGCAGTGATGTTGTTTGGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000959 GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016071 GO:0016556 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0046483 GO:0071704 GO:0080156 GO:0090304 GO:0090305 GO:0097159 GO:1900864 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_2

Protein Analysis

699

Amino Acids

77.43

Weight (kDa)

6.5

Isoelectric Point (pI)

40.95

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	120 - 152	6.5e-07	PPR repeat family
PPR	PF01535	122 - 152	5e-07	PPR repeat
PPR_1	PF12854	152 - 179	3.9e-06	PPR repeat
PPR	PF01535	153 - 183	1.1e-08	PPR repeat
PPR_2	PF13041	153 - 196	1e-09	PPR repeat family
PPR_2	PF13041	251 - 277	3.3e-06	PPR repeat family
PPR_1	PF12854	251 - 278	5.1e-08	PPR repeat
PPR	PF01535	254 - 280	4.7e-07	PPR repeat
PPR_2	PF13041	385 - 415	5.3e-06	PPR repeat family
PPR_2	PF13041	414 - 461	4.1e-10	PPR repeat family
PPR	PF01535	417 - 447	9.1e-07	PPR repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0005804)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G19020
fragaria_vesca	FvH4_4g14290 FvH4_4g14290 FvH4_4g14290 FvH4_4g14290 FvH4_4g14290 FvH4_4g14290 FvH4_4g14290
malus_domestica	MD13G1182300.v1.1 MD16G1182700.v1.1
prunus_persica	Prupe.1G150200_v2.0.a1
pyrus_communis	pycom13g15730
rosa_chinensis	RchiOBHm_Chr4g0418731 RchiOBHm_Chr4g0418821
rosa_laevigata	RLG00000007842
rosa_multiflora	Rmu_sc0000935.1_g000016 Rmu_sc0000935.1_g000030 Rmu_sc0006705.1_g000009 Rmu_sc0020345.1_g000005
rosa_roxburghii	Rroxscaffold_5G00361940 Rroxscaffold_5G00362000
rosa_rugosa	Rorug04G0154800 Rorug04G0154800
rosa_samantha	Rh4BG214200 Rh4CG228300 Rh4CG228600 Rh4DG215500
rosa_wichuraiana	Rw4G018430

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1085
AccB1I	GGYRCC	1 cut(s)	550
AccB7I	CCANNNNNTGG	2 cut(s)	1324, 1964
AccI	GTMKAC	1 cut(s)	464
AccII	CGCG	2 cut(s)	421, 542
AccIII	TCCGGA	1 cut(s)	320
AciI	CCGC	5 cut(s)	33, 309, 542, 991, 1890
AclWI	GGATC	4 cut(s)	1105, 1800, 1949, 1962
AcoI	YGGCCR	2 cut(s)	1587, 1887
AcsI	RAATTY	3 cut(s)	679, 1084, 1438
AcuI	CTGAAG	2 cut(s)	322, 1109
AfaI	GTAC	5 cut(s)	299, 788, 865, 1897, 1975
AfiI	CCNNNNNNNGG	6 cut(s)	217, 339, 449, 1324, 1497, 1964
AgsI	TTSAA	5 cut(s)	781, 1133, 1619, 1662, 1760
AjnI	CCWGG	2 cut(s)	216, 2071
AjuI	GAANNNNNNNTTGG	4 cut(s)	1283, 1315, 2012, 2044
AluBI	AGCT	9 cut(s)	285, 355, 427, 501, 562, 652, 908, 1472, 1808
AluI	AGCT	9 cut(s)	285, 355, 427, 501, 562, 652, 908, 1472, 1808
Alw26I	GTCTC	5 cut(s)	79, 181, 463, 1561, 1617
AlwI	GGATC	4 cut(s)	1105, 1800, 1949, 1962
AlwNI	CAGNNNCTG	2 cut(s)	345, 453
Ama87I	CYCGRG	1 cut(s)	746
Aor13HI	TCCGGA	1 cut(s)	320
AoxI	GGCC	5 cut(s)	207, 220, 253, 1587, 1887
ApeKI	GCWGC	4 cut(s)	453, 649, 931, 1469
ApoI	RAATTY	3 cut(s)	679, 1084, 1438
AspA2I	CCTAGG	1 cut(s)	1681
AspLEI	GCGC	5 cut(s)	168, 197, 421, 423, 2079
AspS9I	GGNCC	5 cut(s)	208, 220, 342, 358, 947
AsuC2I	CCSGG	1 cut(s)	362
AsuHPI	GGTGA	5 cut(s)	22, 51, 697, 1551, 2061
AsuII	TTCGAA	1 cut(s)	129
AvaI	CYCGRG	1 cut(s)	746
AvaII	GGWCC	3 cut(s)	342, 358, 947
AvrII	CCTAGG	1 cut(s)	1681
BaeGI	GKGCMC	1 cut(s)	1880
BalI	TGGCCA	1 cut(s)	1589
BamHI	GGATCC	1 cut(s)	1954
BanI	GGYRCC	1 cut(s)	550
BanII	GRGCYC	1 cut(s)	1420
BbsI	GAAGAC	1 cut(s)	1115
BbvI	GCAGC	4 cut(s)	440, 661, 918, 1481
BccI	CCATC	6 cut(s)	120, 650, 655, 869, 1392, 1966
BciT130I	CCWGG	2 cut(s)	218, 2073
BciVI	GTATCC	2 cut(s)	1175, 1332
BcnI	CCSGG	1 cut(s)	362
BcoDI	GTCTC	5 cut(s)	79, 181, 463, 1561, 1617
BfaI	CTAG	4 cut(s)	816, 1332, 1682, 1913
BfoI	RGCGCY	1 cut(s)	169
BfuAI	ACCTGC	1 cut(s)	1085
BfuI	GTATCC	2 cut(s)	1175, 1332
BisI	GCNGC	6 cut(s)	310, 454, 650, 932, 1470, 1890
BlnI	CCTAGG	1 cut(s)	1681
BlsI	GCNGC	6 cut(s)	311, 455, 651, 933, 1471, 1891
Bme1390I	CCNGG	3 cut(s)	218, 362, 2073
Bme18I	GGWCC	3 cut(s)	342, 358, 947
BmeT110I	CYCGRG	1 cut(s)	746
BmgT120I	GGNCC	5 cut(s)	208, 220, 342, 358, 947
BmiI	GGNNCC	6 cut(s)	313, 325, 360, 552, 948, 1956
BmrFI	CCNGG	3 cut(s)	218, 362, 2073
BmrI	ACTGGG	1 cut(s)	1808
BmsI	GCATC	8 cut(s)	612, 732, 817, 1149, 1166, 1221, 1813, 1993
BmuI	ACTGGG	1 cut(s)	1808
BpiI	GAAGAC	1 cut(s)	1115
BplI	GAGNNNNNCTC	2 cut(s)	2009, 2041
BpmI	CTGGAG	1 cut(s)	523
Bpu14I	TTCGAA	1 cut(s)	129
BpuEI	CTTGAG	1 cut(s)	230
BpuMI	CCSGG	1 cut(s)	362
Bsa29I	ATCGAT	1 cut(s)	584
BsaAI	YACGTR	1 cut(s)	765
BsaI	GGTCTC	1 cut(s)	79
BsaJI	CCNNGG	4 cut(s)	217, 1562, 1681, 2072
BsaWI	WCCGGW	1 cut(s)	320
Bsc4I	CCNNNNNNNGG	6 cut(s)	217, 339, 449, 1324, 1497, 1964
Bse1I	ACTGG	1 cut(s)	1803
BseAI	TCCGGA	1 cut(s)	320
BseBI	CCWGG	2 cut(s)	218, 2073
BseCI	ATCGAT	1 cut(s)	584
BseDI	CCNNGG	4 cut(s)	217, 1562, 1681, 2072
BseGI	GGATG	5 cut(s)	273, 627, 666, 1249, 2016
BseLI	CCNNNNNNNGG	6 cut(s)	217, 339, 449, 1324, 1497, 1964
BseMII	CTCAG	4 cut(s)	28, 342, 1278, 1818
BseNI	ACTGG	1 cut(s)	1803
BsePI	GCGCGC	1 cut(s)	419
BseRI	GAGGAG	2 cut(s)	40, 248
BseSI	GKGCMC	1 cut(s)	1880
BseXI	GCAGC	4 cut(s)	440, 661, 918, 1481
BseYI	CCCAGC	3 cut(s)	386, 797, 938
BsgI	GTGCAG	1 cut(s)	1488
Bsh1236I	CGCG	2 cut(s)	421, 542
BshFI	GGCC	5 cut(s)	209, 222, 255, 1589, 1889
BshNI	GGYRCC	1 cut(s)	550
BshVI	ATCGAT	1 cut(s)	584
BsiHKCI	CYCGRG	1 cut(s)	746
BsiSI	CCGG	3 cut(s)	252, 321, 362
BslI	CCNNNNNNNGG	6 cut(s)	217, 339, 449, 1324, 1497, 1964
BsmAI	GTCTC	5 cut(s)	79, 181, 463, 1561, 1617
BsmBI	CGTCTC	1 cut(s)	463
BsmI	GAATGC	2 cut(s)	1171, 1573
BsnI	GGCC	5 cut(s)	209, 222, 255, 1589, 1889
Bso31I	GGTCTC	1 cut(s)	79
BsoBI	CYCGRG	1 cut(s)	746
Bsp119I	TTCGAA	1 cut(s)	129
Bsp1286I	GDGCHC	2 cut(s)	1420, 1880
Bsp13I	TCCGGA	1 cut(s)	320
Bsp1407I	TGTACA	1 cut(s)	1895
Bsp143I	GATC	4 cut(s)	1110, 1792, 1954, 2066
Bsp19I	CCATGG	1 cut(s)	1562
BspACI	CCGC	5 cut(s)	33, 309, 542, 991, 1890
BspANI	GGCC	5 cut(s)	209, 222, 255, 1589, 1889
BspCNI	CTCAG	4 cut(s)	27, 343, 1279, 1819
BspDI	ATCGAT	1 cut(s)	584
BspEI	TCCGGA	1 cut(s)	320
BspFNI	CGCG	2 cut(s)	421, 542
BspLI	GGNNCC	6 cut(s)	313, 325, 360, 552, 948, 1956
BspMI	ACCTGC	1 cut(s)	1085
BspPI	GGATC	4 cut(s)	1105, 1800, 1949, 1962
BspT104I	TTCGAA	1 cut(s)	129
BspT107I	GGYRCC	1 cut(s)	550
BspTNI	GGTCTC	1 cut(s)	79
BsrGI	TGTACA	1 cut(s)	1895
BsrI	ACTGG	1 cut(s)	1803
BssECI	CCNNGG	4 cut(s)	217, 1562, 1681, 2072
BssHII	GCGCGC	1 cut(s)	419
BssMI	GATC	4 cut(s)	1110, 1792, 1954, 2066
BssNAI	GTATAC	1 cut(s)	465
BssT1I	CCWWGG	2 cut(s)	1562, 1681
Bst1107I	GTATAC	1 cut(s)	465
Bst2UI	CCWGG	2 cut(s)	218, 2073
Bst4CI	ACNGT	4 cut(s)	1055, 1747, 1950, 1978
Bst6I	CTCTTC	3 cut(s)	128, 341, 1555
BstAUI	TGTACA	1 cut(s)	1895
BstBAI	YACGTR	1 cut(s)	765
BstBI	TTCGAA	1 cut(s)	129
BstC8I	GCNNGC	7 cut(s)	224, 384, 421, 425, 936, 1810, 1847
BstDEI	CTNAG	5 cut(s)	14, 351, 1287, 1516, 1827
BstDSI	CCRYGG	1 cut(s)	1562
BstENI	CCTNNNNNAGG	1 cut(s)	447
BstF5I	GGATG	5 cut(s)	273, 627, 666, 1249, 2016
BstFNI	CGCG	2 cut(s)	421, 542
BstH2I	RGCGCY	1 cut(s)	169
BstHHI	GCGC	5 cut(s)	168, 197, 421, 423, 2079
BstKTI	GATC	4 cut(s)	1113, 1795, 1957, 2069
BstMAI	GTCTC	5 cut(s)	79, 181, 463, 1561, 1617
BstMBI	GATC	4 cut(s)	1110, 1792, 1954, 2066
BstMWI	GCNNNNNNNGC	4 cut(s)	291, 559, 698, 1175
BstNI	CCWGG	2 cut(s)	218, 2073
BstNSI	RCATGY	6 cut(s)	298, 987, 1154, 1604, 1849, 1896
BstSCI	CCNGG	3 cut(s)	216, 360, 2071
BstSLI	GKGCMC	1 cut(s)	1880
BstUI	CGCG	2 cut(s)	421, 542
BstV1I	GCAGC	4 cut(s)	440, 661, 918, 1481
BstV2I	GAAGAC	1 cut(s)	1115
BstX2I	RGATCY	2 cut(s)	1792, 1954
BstYI	RGATCY	2 cut(s)	1792, 1954
BstZ17I	GTATAC	1 cut(s)	465
Bsu15I	ATCGAT	1 cut(s)	584
BsuI	GTATCC	2 cut(s)	1175, 1332
BsuRI	GGCC	5 cut(s)	209, 222, 255, 1589, 1889
BsuTUI	ATCGAT	1 cut(s)	584
BtgI	CCRYGG	1 cut(s)	1562
BtsCI	GGATG	5 cut(s)	273, 627, 666, 1249, 2016
BtsI	GCAGTG	1 cut(s)	2086
BtsIMutI	CAGTG	1 cut(s)	2086
BveI	ACCTGC	1 cut(s)	1085
Cac8I	GCNNGC	7 cut(s)	224, 384, 421, 425, 936, 1810, 1847
CaiI	CAGNNNCTG	2 cut(s)	345, 453
CfoI	GCGC	5 cut(s)	168, 197, 421, 423, 2079
Cfr13I	GGNCC	5 cut(s)	208, 220, 342, 358, 947
ClaI	ATCGAT	1 cut(s)	584
CseI	GACGC	1 cut(s)	445
Csp6I	GTAC	5 cut(s)	298, 787, 864, 1896, 1974
CspCI	CAANNNNNGTGG	2 cut(s)	875, 910
CviQI	GTAC	5 cut(s)	298, 787, 864, 1896, 1974
DdeI	CTNAG	5 cut(s)	14, 351, 1287, 1516, 1827
DpnI	GATC	4 cut(s)	1112, 1794, 1956, 2068
DpnII	GATC	4 cut(s)	1110, 1792, 1954, 2066
EaeI	YGGCCR	2 cut(s)	1587, 1887
Eam1104I	CTCTTC	3 cut(s)	128, 341, 1555
EarI	CTCTTC	3 cut(s)	128, 341, 1555
Eco130I	CCWWGG	2 cut(s)	1562, 1681
Eco24I	GRGCYC	1 cut(s)	1420
Eco31I	GGTCTC	1 cut(s)	79
Eco32I	GATATC	1 cut(s)	1648
Eco47I	GGWCC	3 cut(s)	342, 358, 947
Eco57I	CTGAAG	2 cut(s)	322, 1109
Eco88I	CYCGRG	1 cut(s)	746
EcoNI	CCTNNNNNAGG	1 cut(s)	447
EcoO109I	RGGNCCY	1 cut(s)	342
EcoRII	CCWGG	2 cut(s)	216, 2071
EcoRV	GATATC	1 cut(s)	1648
EcoT14I	CCWWGG	2 cut(s)	1562, 1681
EcoT38I	GRGCYC	1 cut(s)	1420
ErhI	CCWWGG	2 cut(s)	1562, 1681
Esp3I	CGTCTC	1 cut(s)	463
FauI	CCCGC	1 cut(s)	535
FauNDI	CATATG	1 cut(s)	1430
FblI	GTMKAC	1 cut(s)	464
Fnu4HI	GCNGC	6 cut(s)	310, 454, 650, 932, 1470, 1890
FokI	GGATG	5 cut(s)	260, 634, 673, 1256, 2023
FriOI	GRGCYC	1 cut(s)	1420
Fsp4HI	GCNGC	6 cut(s)	310, 454, 650, 932, 1470, 1890
FspBI	CTAG	4 cut(s)	816, 1332, 1682, 1913
GlaI	GCGC	5 cut(s)	167, 196, 420, 422, 2078
GluI	GCNGC	6 cut(s)	310, 454, 650, 932, 1470, 1890
GsaI	CCCAGC	3 cut(s)	390, 801, 942
GsuI	CTGGAG	1 cut(s)	523
HaeII	RGCGCY	1 cut(s)	169
HaeIII	GGCC	5 cut(s)	209, 222, 255, 1589, 1889
HapII	CCGG	3 cut(s)	252, 321, 362
HgaI	GACGC	1 cut(s)	445
HhaI	GCGC	5 cut(s)	168, 197, 421, 423, 2079
Hin6I	GCGC	5 cut(s)	166, 195, 419, 421, 2077
HinP1I	GCGC	5 cut(s)	166, 195, 419, 421, 2077
HindIII	AAGCTT	1 cut(s)	906
HinfI	GANTC	4 cut(s)	120, 1677, 1909, 1939
HpaII	CCGG	3 cut(s)	252, 321, 362
HphI	GGTGA	5 cut(s)	22, 51, 697, 1551, 2061
Hpy166II	GTNNAC	1 cut(s)	465
Hpy188I	TCNGA	9 cut(s)	17, 119, 352, 621, 951, 1297, 1452, 1944, 2049
Hpy188III	TCNNGA	5 cut(s)	321, 489, 1421, 1616, 1913
Hpy8I	GTNNAC	1 cut(s)	465
Hpy99I	CGWCG	1 cut(s)	679
HpyAV	CCTTC	5 cut(s)	280, 682, 720, 1400, 1849
HpyCH4III	ACNGT	4 cut(s)	1055, 1747, 1950, 1978
HpyCH4IV	ACGT	1 cut(s)	764
HpyF10VI	GCNNNNNNNGC	4 cut(s)	291, 559, 698, 1175
HpyF3I	CTNAG	5 cut(s)	14, 351, 1287, 1516, 1827
HpySE526I	ACGT	1 cut(s)	764
HspAI	GCGC	5 cut(s)	166, 195, 419, 421, 2077
Kpn2I	TCCGGA	1 cut(s)	320
Kzo9I	GATC	4 cut(s)	1110, 1792, 1954, 2066
LmnI	GCTCC	4 cut(s)	317, 323, 498, 1147
Lsp1109I	GCAGC	4 cut(s)	440, 661, 918, 1481
LweI	GCATC	8 cut(s)	612, 732, 817, 1149, 1166, 1221, 1813, 1993
MaeI	CTAG	4 cut(s)	816, 1332, 1682, 1913
MaeII	ACGT	1 cut(s)	764
MaeIII	GTNAC	3 cut(s)	371, 760, 1274
MalI	GATC	4 cut(s)	1112, 1794, 1956, 2068
MboI	GATC	4 cut(s)	1110, 1792, 1954, 2066
MboII	GAAGA	5 cut(s)	115, 118, 328, 1115, 1542
MflI	RGATCY	2 cut(s)	1792, 1954
MhlI	GDGCHC	2 cut(s)	1420, 1880
MlsI	TGGCCA	1 cut(s)	1589
MluNI	TGGCCA	1 cut(s)	1589
MlyI	GAGTC	2 cut(s)	114, 1686
MmeI	TCCRAC	6 cut(s)	288, 599, 975, 1342, 1932, 2013
Mox20I	TGGCCA	1 cut(s)	1589
MroI	TCCGGA	1 cut(s)	320
MscI	TGGCCA	1 cut(s)	1589
MseI	TTAA	3 cut(s)	642, 1463, 1731
MslI	CAYNNNNRTG	3 cut(s)	1481, 1599, 1850
Msp20I	TGGCCA	1 cut(s)	1589
MspA1I	CMGCKG	1 cut(s)	427
MspI	CCGG	3 cut(s)	252, 321, 362
MspR9I	CCNGG	3 cut(s)	218, 362, 2073
Mva1269I	GAATGC	2 cut(s)	1171, 1573
MvaI	CCWGG	2 cut(s)	218, 2073
MvnI	CGCG	2 cut(s)	421, 542
MwoI	GCNNNNNNNGC	4 cut(s)	291, 559, 698, 1175
NciI	CCSGG	1 cut(s)	362
NcoI	CCATGG	1 cut(s)	1562
NdeI	CATATG	1 cut(s)	1430
NdeII	GATC	4 cut(s)	1110, 1792, 1954, 2066
NlaIV	GGNNCC	6 cut(s)	313, 325, 360, 552, 948, 1956
NspI	RCATGY	6 cut(s)	298, 987, 1154, 1604, 1849, 1896
NspV	TTCGAA	1 cut(s)	129
PaeI	GCATGC	1 cut(s)	1849
PauI	GCGCGC	1 cut(s)	419
PctI	GAATGC	2 cut(s)	1171, 1573
PfeI	GAWTC	2 cut(s)	1909, 1939
PflMI	CCANNNNNTGG	2 cut(s)	1324, 1964
PkrI	GCNGC	6 cut(s)	311, 455, 651, 933, 1471, 1891
PleI	GAGTC	2 cut(s)	114, 1685
PpsI	GAGTC	2 cut(s)	114, 1685
Ppu21I	YACGTR	1 cut(s)	765
PpuMI	RGGWCCY	1 cut(s)	342
Psp5II	RGGWCCY	1 cut(s)	342
Psp6I	CCWGG	2 cut(s)	216, 2071
PspFI	CCCAGC	3 cut(s)	386, 797, 938
PspGI	CCWGG	2 cut(s)	216, 2071
PspN4I	GGNNCC	6 cut(s)	313, 325, 360, 552, 948, 1956
PspPI	GGNCC	5 cut(s)	208, 220, 342, 358, 947
PspPPI	RGGWCCY	1 cut(s)	342
PstNI	CAGNNNCTG	2 cut(s)	345, 453
PsuI	RGATCY	2 cut(s)	1792, 1954
PteI	GCGCGC	1 cut(s)	419
PvuII	CAGCTG	1 cut(s)	427
RsaI	GTAC	5 cut(s)	299, 788, 865, 1897, 1975
RsaNI	GTAC	5 cut(s)	298, 787, 864, 1896, 1974
RseI	CAYNNNNRTG	3 cut(s)	1481, 1599, 1850
SaqAI	TTAA	3 cut(s)	642, 1463, 1731
SatI	GCNGC	6 cut(s)	310, 454, 650, 932, 1470, 1890
Sau3AI	GATC	4 cut(s)	1110, 1792, 1954, 2066
Sau96I	GGNCC	5 cut(s)	208, 220, 342, 358, 947
SchI	GAGTC	2 cut(s)	114, 1686
ScrFI	CCNGG	3 cut(s)	218, 362, 2073
SduI	GDGCHC	2 cut(s)	1420, 1880
SfaNI	GCATC	8 cut(s)	612, 732, 817, 1149, 1166, 1221, 1813, 1993
SfuI	TTCGAA	1 cut(s)	129
SinI	GGWCC	3 cut(s)	342, 358, 947
SmiMI	CAYNNNNRTG	3 cut(s)	1481, 1599, 1850
SmlI	CTYRAG	1 cut(s)	245
SmoI	CTYRAG	1 cut(s)	245
SphI	GCATGC	1 cut(s)	1849
SsiI	CCGC	5 cut(s)	33, 309, 542, 991, 1890
SspI	AATATT	1 cut(s)	1623
SspMI	CTAG	4 cut(s)	816, 1332, 1682, 1913
StyD4I	CCNGG	3 cut(s)	216, 360, 2071
StyI	CCWWGG	2 cut(s)	1562, 1681
TaaI	ACNGT	4 cut(s)	1055, 1747, 1950, 1978
TaiI	ACGT	1 cut(s)	767
TaqI	TCGA	5 cut(s)	129, 156, 488, 584, 674
TatI	WGTACW	3 cut(s)	297, 1895, 1973
TauI	GCSGC	2 cut(s)	312, 1892
TfiI	GAWTC	2 cut(s)	1909, 1939
Tru1I	TTAA	3 cut(s)	642, 1463, 1731
Tru9I	TTAA	3 cut(s)	642, 1463, 1731
TscAI	CASTG	1 cut(s)	2086
TseI	GCWGC	4 cut(s)	453, 649, 931, 1469
TspDTI	ATGAA	7 cut(s)	262, 617, 1013, 1054, 1242, 1660, 1868
TspGWI	ACGGA	1 cut(s)	1611
TspRI	CASTG	1 cut(s)	2086
Van91I	CCANNNNNTGG	2 cut(s)	1324, 1964
VpaK11BI	GGWCC	3 cut(s)	342, 358, 947
XagI	CCTNNNNNAGG	1 cut(s)	447
XapI	RAATTY	3 cut(s)	679, 1084, 1438
XbaI	TCTAGA	1 cut(s)	1912
XceI	RCATGY	6 cut(s)	298, 987, 1154, 1604, 1849, 1896
XmaJI	CCTAGG	1 cut(s)	1681
XmiI	GTMKAC	1 cut(s)	464
XspI	CTAG	4 cut(s)	816, 1332, 1682, 1913

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.