Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000004

Orthogroup ID

OG0005804

Physical Location & Seq

Genomic Coordinates Forward (+)

27092964 .. 27106492

Gene Structure 13529 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug04G0154800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1752 bp

ATGTCTCTCTCTCTCTCTCTCTCTCAAGGTCGGTTGGGTTTGGATTTGGGTTTGGGGCAGATGGATTCCGACGCCATATTATCGTCCTCGGAAGATATGCACGACGCCAACGACGTTGAATCCGACGAGGAGGGCTTCTACAGCGACGAGAACGAAGTCGCCTCCGACTACAATACCGACAACGACGACGTCGATGATTACGTCATCGAGGAAGATGAAGACGGAATCAACATGATCCAGGCTCGTCGCCCTGAGAATAACTACATCGTCTTGAAGGAGTTAGATATAAAGGAACGCCAGGAAGATGATATTACGAGTGTATCTTCTGTGCTGTCCATATCAAGAGCTGCTTCAACCATTTTGCTTCGCTACTATAATTGGAATGTTAGTGAAGTGCATGAAGCATGGTTTGCAGATGAAGAGAAAGTCCGGAAAACTGTAGGCTTGTTACCTGGGCCAGTTGTTCAGTTTGCAAAGTCAAGAGAACTGATGTGTGGGATCTGTTTTGAAGCCTTTCCACGTAGTGGGCTAAAATCAGCAGATTGTGGTCATCCTTTCTGTTTTGAATGTTGGGAAGGCTACATTAGAACATCCATCAACGATGGTCCTGGATGTTTGATGCTGAGATGTCCTGATCCATCTTGTGGTGCCGCTGTTGGTCAAGATATGATTAATATATTTGTCTGTGATGATGATAAACGCAAGTACTCTAAGTACCTGCTTAGGTCTTTTGTTGAAGACAACAAGAAGACCAAGTGGTGTCCAGCTCCGGGTTGTGAGCATGCTGTTAATTATGTTGGAGATAATGAAAATTATGATGTTTCTTGCCTCTGTTCATGCGACTTCTGCTGGAATTGTACGGAGGAAACCCATCGTCCTGTGGACTGTAACACTGTAAGGTTATGGATCTTGAAGAACAGTGCTGAGTCTGAAAACATGAACTGGATATTAGCCAATTCCAAGCCATGTCCAAAGTGCAAGCGACCGATTGAAAAAAACCAAGGGTGTATGCACATGACATGCTCACCAGCTTGTAAATTTGAATTTTGCTGGCTATGCCTTGGTGCATGGTCAGACCATGGTGAGAGGACAGGCGGTTTCTATGCTTGTAATCGCTATGAGGCAGCTAAGCAAGAGGGAGTTTATGATGAGGCTGAGAGAAGAAGAGAAATGGCAAAGAATTCTTTGGAGAGATACACTCATTATTATGAACGTTGGGCAAGCAATCAATCGTCAAGGCAGAAAGCTCTTGTTGACTTACATCAAATGCAAACTGTCAATATGGAGAAGCTGAGTGAGATACAATGTCAACCTGAGTCTCAGCTCAAGTTCTTATCTGATGCCTGGCAACAGATTGTTGAATGTAGGAGAGTGCTGAAATGGACTTATGCATATGGATACTACCTAACTGAGCATGAGAATGCTAAGAAGCAGTTTTTTGAGTACTTGCAAGGTGAGGCAGAGTCTGGGCTGGAAAGGCTTCATCAATGTGCAGAGAAGGAGCTACTACCATTCCTCAATGCCGATGGCCCATCACGAGAATTCATTGAATTCCATACGAAACTAGCAGGACTGACTGCGGTAACTAAATCCTACTTTGAGAATCTGGTGAGGGCATTGGAGAATCACCTATCAGATGTGGACTGTCACCAAGCTGGCAGTCTGGCAACAAGCTCAAAAAATGGAACCAGCAAAGGAAAAGGTGGCAGAGGAAAGGAAACTAGTCGAGCGGGTGGCTCCAGCAGAAATTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000959 GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016071 GO:0016556 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0046483 GO:0071704 GO:0080156 GO:0090304 GO:0090305 GO:0097159 GO:1900864 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_2

Protein Analysis

583

Amino Acids

66.22

Weight (kDa)

4.99

Isoelectric Point (pI)

54.82

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
UBA_ARI1	PF21235	99 - 137	9.1e-09	E3 ubiquitin-protein ligase ARIH1, UBA-like domain
IBR	PF01485	235 - 296	1.1e-13	IBR domain, a half RING-finger domain
IBR	PF01485	314 - 360	1.3e-07	IBR domain, a half RING-finger domain
IBR_1	PF22191	318 - 358	1e-14	IBR domain
IBR_2	PF22605	319 - 358	4e-13	IBR domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005804)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G19020
fragaria_vesca	FvH4_4g14290 FvH4_4g14290 FvH4_4g14290 FvH4_4g14290 FvH4_4g14290 FvH4_4g14290 FvH4_4g14290
malus_domestica	MD13G1182300.v1.1 MD16G1182700.v1.1
prunus_persica	Prupe.1G150200_v2.0.a1
pyrus_communis	pycom13g15730
rosa_chinensis	RchiOBHm_Chr4g0418731 RchiOBHm_Chr4g0418821
rosa_laevigata	RLG00000007842
rosa_multiflora	Rmu_sc0000935.1_g000016 Rmu_sc0000935.1_g000030 Rmu_sc0006705.1_g000009 Rmu_sc0020345.1_g000005
rosa_roxburghii	Rroxscaffold_5G00361940 Rroxscaffold_5G00362000
rosa_rugosa	Rorug04G0154800 Rorug04G0154800
rosa_samantha	Rh4BG214200 Rh4CG228300 Rh4CG228600 Rh4DG215500
rosa_wichuraiana	Rw4G018430

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	192
Acc36I	ACCTGC	1 cut(s)	726
AccB1I	GGYRCC	1 cut(s)	647
AccB7I	CCANNNNNTGG	2 cut(s)	524, 644
AccBSI	CCGCTC	1 cut(s)	1730
AccIII	TCCGGA	1 cut(s)	429
AciI	CCGC	4 cut(s)	651, 1095, 1580, 1730
AclI	AACGTT	1 cut(s)	1213
AclWI	GGATC	4 cut(s)	229, 506, 629, 914
AcsI	RAATTY	5 cut(s)	1037, 1043, 1180, 1541, 1550
AcyI	GRCGYC	3 cut(s)	72, 105, 189
AdeI	CACNNNGTG	1 cut(s)	524
AfaI	GTAC	4 cut(s)	707, 716, 859, 1445
AfiI	CCNNNNNNNGG	3 cut(s)	524, 644, 770
AhlI	ACTAGT	1 cut(s)	1721
AjnI	CCWGG	5 cut(s)	237, 297, 451, 607, 1343
Alw26I	GTCTC	2 cut(s)	9, 1323
AlwI	GGATC	4 cut(s)	229, 506, 629, 914
AlwNI	CAGNNNCTG	1 cut(s)	1466
Aor13HI	TCCGGA	1 cut(s)	429
AoxI	GGCC	2 cut(s)	455, 1528
ApeKI	GCWGC	2 cut(s)	347, 1124
ApoI	RAATTY	5 cut(s)	1037, 1043, 1180, 1541, 1550
AseI	ATTAAT	1 cut(s)	672
Asp700I	GAANNNNTTC	2 cut(s)	513, 1479
AspS9I	GGNCC	3 cut(s)	455, 605, 1529
AsuC2I	CCSGG	1 cut(s)	771
AsuHPI	GGTGA	6 cut(s)	1017, 1094, 1466, 1619, 1621, 1640
AvaII	GGWCC	1 cut(s)	605
BaeI	ACNNNNGTAYC	2 cut(s)	303, 336
BanI	GGYRCC	1 cut(s)	647
BauI	CACGAG	1 cut(s)	1536
BbsI	GAAGAC	3 cut(s)	225, 744, 755
BbvI	GCAGC	2 cut(s)	334, 1136
BccI	CCATC	7 cut(s)	55, 596, 602, 646, 879, 1520, 1540
BciT130I	CCWGG	5 cut(s)	239, 299, 453, 609, 1345
BciVI	GTATCC	1 cut(s)	1391
BcnI	CCSGG	1 cut(s)	771
BcoDI	GTCTC	2 cut(s)	9, 1323
BcuI	ACTAGT	1 cut(s)	1721
BfaI	CTAG	2 cut(s)	1565, 1722
BfmI	CTRYAG	2 cut(s)	139, 438
BfuAI	ACCTGC	1 cut(s)	726
BfuI	GTATCC	1 cut(s)	1391
BisI	GCNGC	3 cut(s)	348, 651, 1125
BlpI	GCTNAGC	1 cut(s)	1128
BlsI	GCNGC	3 cut(s)	349, 652, 1126
BmcAI	AGTACT	2 cut(s)	707, 1445
Bme1390I	CCNGG	6 cut(s)	239, 299, 453, 609, 771, 1345
Bme18I	GGWCC	1 cut(s)	605
BmgT120I	GGNCC	3 cut(s)	455, 605, 1529
BmiI	GGNNCC	3 cut(s)	649, 1687, 1738
BmrFI	CCNGG	6 cut(s)	239, 299, 453, 609, 771, 1345
BmsI	GCATC	2 cut(s)	609, 1330
BpiI	GAAGAC	3 cut(s)	225, 744, 755
BplI	GAGNNNNNCTC	2 cut(s)	1183, 1215
BpmI	CTGGAG	1 cut(s)	1723
Bpu10I	CCTNAGC	1 cut(s)	722
Bpu1102I	GCTNAGC	1 cut(s)	1128
BpuEI	CTTGAG	2 cut(s)	9, 1310
BpuMI	CCSGG	1 cut(s)	771
BsaAI	YACGTR	1 cut(s)	521
BsaHI	GRCGYC	3 cut(s)	72, 105, 189
BsaJI	CCNNGG	5 cut(s)	87, 452, 1000, 1060, 1078
BsaWI	WCCGGW	1 cut(s)	429
Bsc4I	CCNNNNNNNGG	3 cut(s)	524, 644, 770
Bse1I	ACTGG	2 cut(s)	458, 947
BseAI	TCCGGA	1 cut(s)	429
BseBI	CCWGG	5 cut(s)	239, 299, 453, 609, 1345
BseDI	CCNNGG	5 cut(s)	87, 452, 1000, 1060, 1078
BseGI	GGATG	3 cut(s)	550, 590, 617
BseLI	CCNNNNNNNGG	3 cut(s)	524, 644, 770
BseMII	CTCAG	8 cut(s)	243, 614, 915, 1146, 1283, 1305, 1334, 1401
BseNI	ACTGG	2 cut(s)	458, 947
BseRI	GAGGAG	1 cut(s)	143
BseXI	GCAGC	2 cut(s)	334, 1136
BsgI	GTGCAG	1 cut(s)	1512
Bsh1285I	CGRYCG	1 cut(s)	986
BshFI	GGCC	2 cut(s)	457, 1530
BshNI	GGYRCC	1 cut(s)	647
BsiEI	CGRYCG	1 cut(s)	986
BsiSI	CCGG	2 cut(s)	430, 770
BslI	CCNNNNNNNGG	3 cut(s)	524, 644, 770
BsmAI	GTCTC	2 cut(s)	9, 1323
BsmI	GAATGC	1 cut(s)	1426
BsnI	GGCC	2 cut(s)	457, 1530
Bsp13I	TCCGGA	1 cut(s)	429
Bsp143I	GATC	4 cut(s)	234, 498, 634, 906
Bsp1720I	GCTNAGC	1 cut(s)	1128
Bsp19I	CCATGG	1 cut(s)	1078
BspACI	CCGC	4 cut(s)	651, 1095, 1580, 1730
BspANI	GGCC	2 cut(s)	457, 1530
BspCNI	CTCAG	8 cut(s)	244, 615, 916, 1147, 1284, 1306, 1333, 1402
BspEI	TCCGGA	1 cut(s)	429
BspLI	GGNNCC	3 cut(s)	649, 1687, 1738
BspMI	ACCTGC	1 cut(s)	726
BspPI	GGATC	4 cut(s)	229, 506, 629, 914
BspT107I	GGYRCC	1 cut(s)	647
BsrBI	CCGCTC	1 cut(s)	1730
BsrI	ACTGG	2 cut(s)	458, 947
BssECI	CCNNGG	5 cut(s)	87, 452, 1000, 1060, 1078
BssMI	GATC	4 cut(s)	234, 498, 634, 906
BssNI	GRCGYC	3 cut(s)	72, 105, 189
BssSI	CACGAG	1 cut(s)	1536
BssT1I	CCWWGG	3 cut(s)	1000, 1060, 1078
Bst2BI	CACGAG	1 cut(s)	1536
Bst2UI	CCWGG	5 cut(s)	239, 299, 453, 609, 1345
Bst4CI	ACNGT	6 cut(s)	439, 887, 895, 920, 1276, 1646
Bst6I	CTCTTC	2 cut(s)	414, 1159
BstACI	GRCGYC	3 cut(s)	72, 105, 189
BstAPI	GCANNNNNTGC	1 cut(s)	410
BstBAI	YACGTR	1 cut(s)	521
BstC8I	GCNNGC	5 cut(s)	783, 980, 1052, 1222, 1657
BstDSI	CCRYGG	1 cut(s)	1078
BstF5I	GGATG	3 cut(s)	550, 590, 617
BstKTI	GATC	4 cut(s)	237, 501, 637, 909
BstMAI	GTCTC	2 cut(s)	9, 1323
BstMBI	GATC	4 cut(s)	234, 498, 634, 906
BstMCI	CGRYCG	1 cut(s)	986
BstMWI	GCNNNNNNNGC	5 cut(s)	141, 410, 846, 1056, 1477
BstNI	CCWGG	5 cut(s)	239, 299, 453, 609, 1345
BstNSI	RCATGY	2 cut(s)	785, 1023
BstSCI	CCNGG	6 cut(s)	237, 297, 451, 607, 769, 1343
BstSFI	CTRYAG	2 cut(s)	139, 438
BstV1I	GCAGC	2 cut(s)	334, 1136
BstV2I	GAAGAC	3 cut(s)	225, 744, 755
BstX2I	RGATCY	2 cut(s)	498, 906
BstYI	RGATCY	2 cut(s)	498, 906
BsuI	GTATCC	1 cut(s)	1391
BsuRI	GGCC	2 cut(s)	457, 1530
BtgI	CCRYGG	1 cut(s)	1078
BtsCI	GGATG	3 cut(s)	550, 590, 617
BtsIMutI	CAGTG	2 cut(s)	891, 925
BveI	ACCTGC	1 cut(s)	726
Cac8I	GCNNGC	5 cut(s)	783, 980, 1052, 1222, 1657
CaiI	CAGNNNCTG	1 cut(s)	1466
Cfr13I	GGNCC	3 cut(s)	455, 605, 1529
CseI	GACGC	2 cut(s)	80, 113
Csp6I	GTAC	4 cut(s)	706, 715, 858, 1444
CviQI	GTAC	4 cut(s)	706, 715, 858, 1444
DpnI	GATC	4 cut(s)	236, 500, 636, 908
DpnII	GATC	4 cut(s)	234, 498, 634, 906
DraIII	CACNNNGTG	1 cut(s)	524
Eam1104I	CTCTTC	2 cut(s)	414, 1159
EarI	CTCTTC	2 cut(s)	414, 1159
Eco130I	CCWWGG	3 cut(s)	1000, 1060, 1078
Eco47I	GGWCC	1 cut(s)	605
EcoRI	GAATTC	3 cut(s)	1180, 1541, 1550
EcoRII	CCWGG	5 cut(s)	237, 297, 451, 607, 1343
EcoT14I	CCWWGG	3 cut(s)	1000, 1060, 1078
EcoT22I	ATGCAT	1 cut(s)	1393
ErhI	CCWWGG	3 cut(s)	1000, 1060, 1078
FalI	AAGNNNNNCTT	2 cut(s)	334, 366
FauI	CCCGC	1 cut(s)	1723
FauNDI	CATATG	1 cut(s)	1393
Fnu4HI	GCNGC	3 cut(s)	348, 651, 1125
FokI	GGATG	3 cut(s)	537, 577, 624
Fsp4HI	GCNGC	3 cut(s)	348, 651, 1125
FspBI	CTAG	2 cut(s)	1565, 1722
GluI	GCNGC	3 cut(s)	348, 651, 1125
GsuI	CTGGAG	1 cut(s)	1723
HaeIII	GGCC	2 cut(s)	457, 1530
HapII	CCGG	2 cut(s)	430, 770
HgaI	GACGC	2 cut(s)	80, 113
Hin1I	GRCGYC	3 cut(s)	72, 105, 189
HincII	GTYRAC	2 cut(s)	1255, 1310
HindII	GTYRAC	2 cut(s)	1255, 1310
HinfI	GANTC	8 cut(s)	65, 119, 225, 926, 1316, 1463, 1603, 1624
HpaII	CCGG	2 cut(s)	430, 770
HphI	GGTGA	6 cut(s)	1017, 1094, 1466, 1619, 1621, 1640
Hpy166II	GTNNAC	4 cut(s)	883, 1255, 1310, 1642
Hpy188I	TCNGA	8 cut(s)	70, 91, 124, 166, 931, 1075, 1339, 1636
Hpy188III	TCNNGA	8 cut(s)	271, 342, 430, 480, 632, 662, 910, 1536
Hpy8I	GTNNAC	4 cut(s)	883, 1255, 1310, 1642
Hpy99I	CGWCG	9 cut(s)	74, 107, 116, 128, 149, 188, 191, 194, 249
HpyAV	CCTTC	3 cut(s)	268, 569, 1492
HpyCH4III	ACNGT	6 cut(s)	439, 887, 895, 920, 1276, 1646
HpyCH4IV	ACGT	5 cut(s)	114, 189, 201, 520, 1213
HpyF10VI	GCNNNNNNNGC	5 cut(s)	141, 410, 846, 1056, 1477
HpySE526I	ACGT	5 cut(s)	114, 189, 201, 520, 1213
Hsp92I	GRCGYC	3 cut(s)	72, 105, 189
Kpn2I	TCCGGA	1 cut(s)	429
Kzo9I	GATC	4 cut(s)	234, 498, 634, 906
LmnI	GCTCC	3 cut(s)	772, 1501, 1742
Lsp1109I	GCAGC	2 cut(s)	334, 1136
LweI	GCATC	2 cut(s)	609, 1330
MaeI	CTAG	2 cut(s)	1565, 1722
MaeII	ACGT	5 cut(s)	114, 189, 201, 520, 1213
MaeIII	GTNAC	4 cut(s)	447, 887, 1582, 1646
MalI	GATC	4 cut(s)	236, 500, 636, 908
MbiI	CCGCTC	1 cut(s)	1730
MboI	GATC	4 cut(s)	234, 498, 634, 906
MflI	RGATCY	2 cut(s)	498, 906
MlyI	GAGTC	3 cut(s)	935, 1325, 1472
MmeI	TCCRAC	4 cut(s)	93, 147, 189, 778
Mph1103I	ATGCAT	1 cut(s)	1393
MroI	TCCGGA	1 cut(s)	429
MroXI	GAANNNNTTC	2 cut(s)	513, 1479
MseI	TTAA	3 cut(s)	672, 789, 1750
MslI	CAYNNNNRTG	3 cut(s)	1206, 1419, 1488
MspA1I	CMGCKG	1 cut(s)	653
MspI	CCGG	2 cut(s)	430, 770
MspR9I	CCNGG	6 cut(s)	239, 299, 453, 609, 771, 1345
Mva1269I	GAATGC	1 cut(s)	1426
MvaI	CCWGG	5 cut(s)	239, 299, 453, 609, 1345
MwoI	GCNNNNNNNGC	5 cut(s)	141, 410, 846, 1056, 1477
NciI	CCSGG	1 cut(s)	771
NcoI	CCATGG	1 cut(s)	1078
NdeI	CATATG	1 cut(s)	1393
NdeII	GATC	4 cut(s)	234, 498, 634, 906
NlaIV	GGNNCC	3 cut(s)	649, 1687, 1738
NmuCI	GTSAC	1 cut(s)	1646
NsiI	ATGCAT	1 cut(s)	1393
NspI	RCATGY	2 cut(s)	785, 1023
PaeI	GCATGC	1 cut(s)	785
PcsI	WCGNNNNNNNCGW	5 cut(s)	108, 111, 120, 189, 198
PctI	GAATGC	1 cut(s)	1426
PdmI	GAANNNNTTC	2 cut(s)	513, 1479
PfeI	GAWTC	5 cut(s)	65, 119, 225, 1603, 1624
PflFI	GACNNNGTC	1 cut(s)	188
PflMI	CCANNNNNTGG	2 cut(s)	524, 644
PfoI	TCCNGGA	1 cut(s)	607
PkrI	GCNGC	3 cut(s)	349, 652, 1126
PleI	GAGTC	3 cut(s)	934, 1324, 1471
PpsI	GAGTC	3 cut(s)	934, 1324, 1471
Ppu21I	YACGTR	1 cut(s)	521
PshBI	ATTAAT	1 cut(s)	672
Psp1406I	AACGTT	1 cut(s)	1213
Psp6I	CCWGG	5 cut(s)	237, 297, 451, 607, 1343
PspGI	CCWGG	5 cut(s)	237, 297, 451, 607, 1343
PspN4I	GGNNCC	3 cut(s)	649, 1687, 1738
PspPI	GGNCC	3 cut(s)	455, 605, 1529
PstNI	CAGNNNCTG	1 cut(s)	1466
PsuI	RGATCY	2 cut(s)	498, 906
PsyI	GACNNNGTC	1 cut(s)	188
RsaI	GTAC	4 cut(s)	707, 716, 859, 1445
RsaNI	GTAC	4 cut(s)	706, 715, 858, 1444
RseI	CAYNNNNRTG	3 cut(s)	1206, 1419, 1488
SaqAI	TTAA	3 cut(s)	672, 789, 1750
SatI	GCNGC	3 cut(s)	348, 651, 1125
Sau3AI	GATC	4 cut(s)	234, 498, 634, 906
Sau96I	GGNCC	3 cut(s)	455, 605, 1529
ScaI	AGTACT	2 cut(s)	707, 1445
SchI	GAGTC	3 cut(s)	935, 1325, 1472
ScrFI	CCNGG	6 cut(s)	239, 299, 453, 609, 771, 1345
SfaNI	GCATC	2 cut(s)	609, 1330
SfcI	CTRYAG	2 cut(s)	139, 438
SinI	GGWCC	1 cut(s)	605
SmiMI	CAYNNNNRTG	3 cut(s)	1206, 1419, 1488
SmlI	CTYRAG	2 cut(s)	24, 1325
SmoI	CTYRAG	2 cut(s)	24, 1325
SpeI	ACTAGT	1 cut(s)	1721
SphI	GCATGC	1 cut(s)	785
SsiI	CCGC	4 cut(s)	651, 1095, 1580, 1730
SspMI	CTAG	2 cut(s)	1565, 1722
StyD4I	CCNGG	6 cut(s)	237, 297, 451, 607, 769, 1343
StyI	CCWWGG	3 cut(s)	1000, 1060, 1078
TaaI	ACNGT	6 cut(s)	439, 887, 895, 920, 1276, 1646
TaiI	ACGT	5 cut(s)	117, 192, 204, 523, 1216
TaqI	TCGA	3 cut(s)	192, 207, 1726
TaqII	GACCGA	1 cut(s)	1000
TatI	WGTACW	2 cut(s)	705, 1443
TauI	GCSGC	1 cut(s)	653
TfiI	GAWTC	5 cut(s)	65, 119, 225, 1603, 1624
Tru1I	TTAA	3 cut(s)	672, 789, 1750
Tru9I	TTAA	3 cut(s)	672, 789, 1750
TscAI	CASTG	2 cut(s)	898, 925
TseFI	GTSAC	1 cut(s)	1646
TseI	GCWGC	2 cut(s)	347, 1124
Tsp45I	GTSAC	1 cut(s)	1646
TspDTI	ATGAA	9 cut(s)	231, 414, 432, 822, 825, 953, 1224, 1472, 1534
TspGWI	ACGGA	2 cut(s)	237, 875
TspRI	CASTG	2 cut(s)	898, 925
Tth111I	GACNNNGTC	1 cut(s)	188
Van91I	CCANNNNNTGG	2 cut(s)	524, 644
VpaK11BI	GGWCC	1 cut(s)	605
VspI	ATTAAT	1 cut(s)	672
XapI	RAATTY	5 cut(s)	1037, 1043, 1180, 1541, 1550
XceI	RCATGY	2 cut(s)	785, 1023
XmnI	GAANNNNTTC	2 cut(s)	513, 1479
XspI	CTAG	2 cut(s)	1565, 1722
ZraI	GACGTC	1 cut(s)	190
ZrmI	AGTACT	2 cut(s)	707, 1445
Zsp2I	ATGCAT	1 cut(s)	1393

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.