cellular component assembly
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G16760 AT3G16760 |
| fragaria_vesca | FvH4_2g05641 FvH4_4g18770 FvH4_4g18770 FvH4_5g32471 FvH4_5g32480 |
| malus_domestica | MD13G1163500.v1.1 MD16G1163000.v1.1 |
| prunus_persica | Prupe.1G130400_v2.0.a1 |
| pyrus_communis | pycom13g13930 pycom16g13810 |
| rosa_chinensis | RchiOBHm_Chr4g0423561 |
| rosa_laevigata | RLG00000007547 |
| rosa_multiflora | Rmu_sc0004342.1_g000013 Rmu_sc0008281.1_g000006 |
| rosa_roxburghii | Rroxscaffold_5G00365790 |
| rosa_rugosa | Rorug04G0188700 |
| rosa_samantha | Rh4AG248200 Rh4BG253400 Rh4CG261500 Rh4DG248700 |
| rosa_wichuraiana | Rw4G021260 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1221 |
| AccB1I | GGYRCC | 1 cut(s) | 1406 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 671 |
| AccBSI | CCGCTC | 1 cut(s) | 588 |
| AccI | GTMKAC | 1 cut(s) | 866 |
| AccIII | TCCGGA | 1 cut(s) | 1120 |
| AclWI | GGATC | 8 cut(s) | 30, 43, 45, 803, 811, 816, 872, 1376 |
| AcoI | YGGCCR | 1 cut(s) | 439 |
| AcsI | RAATTY | 1 cut(s) | 4 |
| AcuI | CTGAAG | 1 cut(s) | 1374 |
| AcyI | GRCGYC | 1 cut(s) | 365 |
| AfaI | GTAC | 6 cut(s) | 331, 505, 544, 1238, 1305, 1340 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 182, 560, 671, 785, 818, 1058 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 1198 |
| AhlI | ACTAGT | 1 cut(s) | 506 |
| AjnI | CCWGG | 3 cut(s) | 119, 140, 1384 |
| AjuI | GAANNNNNNNTTGG | 3 cut(s) | 34, 961, 993 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 62, 94 |
| AluBI | AGCT | 6 cut(s) | 222, 306, 668, 1033, 1058, 1211 |
| AluI | AGCT | 6 cut(s) | 222, 306, 668, 1033, 1058, 1211 |
| Alw21I | GWGCWC | 1 cut(s) | 1315 |
| Alw26I | GTCTC | 1 cut(s) | 250 |
| Alw44I | GTGCAC | 1 cut(s) | 1311 |
| AlwI | GGATC | 8 cut(s) | 30, 43, 45, 803, 811, 816, 872, 1376 |
| Ama87I | CYCGRG | 1 cut(s) | 907 |
| Aor13HI | TCCGGA | 1 cut(s) | 1120 |
| AoxI | GGCC | 4 cut(s) | 184, 225, 439, 565 |
| ApaLI | GTGCAC | 1 cut(s) | 1311 |
| ApeKI | GCWGC | 5 cut(s) | 124, 574, 929, 932, 1076 |
| ApoI | RAATTY | 1 cut(s) | 4 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 367, 399 |
| AseI | ATTAAT | 1 cut(s) | 498 |
| AspS9I | GGNCC | 4 cut(s) | 144, 185, 225, 566 |
| AsuC2I | CCSGG | 1 cut(s) | 916 |
| AsuHPI | GGTGA | 2 cut(s) | 839, 1406 |
| AsuII | TTCGAA | 1 cut(s) | 659 |
| AvaI | CYCGRG | 1 cut(s) | 907 |
| AvaII | GGWCC | 1 cut(s) | 144 |
| BaeGI | GKGCMC | 1 cut(s) | 1315 |
| BamHI | GGATCC | 2 cut(s) | 35, 808 |
| BanI | GGYRCC | 1 cut(s) | 1406 |
| BanII | GRGCYC | 1 cut(s) | 914 |
| BbsI | GAAGAC | 1 cut(s) | 1034 |
| Bbv12I | GWGCWC | 1 cut(s) | 1315 |
| BbvI | GCAGC | 5 cut(s) | 136, 561, 941, 944, 1088 |
| BccI | CCATC | 3 cut(s) | 115, 382, 719 |
| BceAI | ACGGC | 4 cut(s) | 199, 248, 702, 780 |
| BciT130I | CCWGG | 3 cut(s) | 121, 142, 1386 |
| BciVI | GTATCC | 1 cut(s) | 1128 |
| BcnI | CCSGG | 1 cut(s) | 916 |
| BcoDI | GTCTC | 1 cut(s) | 250 |
| BcuI | ACTAGT | 1 cut(s) | 506 |
| BfaI | CTAG | 8 cut(s) | 432, 489, 507, 534, 768, 870, 1271, 1438 |
| BfmI | CTRYAG | 3 cut(s) | 927, 1074, 1149 |
| BfuI | GTATCC | 1 cut(s) | 1128 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 564 |
| BglII | AGATCT | 1 cut(s) | 1357 |
| BisI | GCNGC | 7 cut(s) | 125, 575, 610, 930, 933, 1077, 1170 |
| BlpI | GCTNAGC | 1 cut(s) | 846 |
| BlsI | GCNGC | 7 cut(s) | 126, 576, 611, 931, 934, 1078, 1171 |
| BmcAI | AGTACT | 2 cut(s) | 505, 544 |
| Bme1390I | CCNGG | 4 cut(s) | 121, 142, 916, 1386 |
| Bme18I | GGWCC | 1 cut(s) | 144 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 1198 |
| BmeT110I | CYCGRG | 1 cut(s) | 907 |
| BmgT120I | GGNCC | 4 cut(s) | 144, 185, 225, 566 |
| BmiI | GGNNCC | 6 cut(s) | 37, 146, 187, 810, 913, 1408 |
| BmrFI | CCNGG | 4 cut(s) | 121, 142, 916, 1386 |
| BmsI | GCATC | 1 cut(s) | 1114 |
| BpiI | GAAGAC | 1 cut(s) | 1034 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 947, 979 |
| BpmI | CTGGAG | 2 cut(s) | 498, 1038 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 846 |
| Bpu14I | TTCGAA | 1 cut(s) | 659 |
| BpuEI | CTTGAG | 2 cut(s) | 1055, 1181 |
| BpuMI | CCSGG | 1 cut(s) | 916 |
| Bsa29I | ATCGAT | 1 cut(s) | 972 |
| BsaBI | GATNNNNATC | 1 cut(s) | 21 |
| BsaHI | GRCGYC | 1 cut(s) | 365 |
| BsaI | GGTCTC | 1 cut(s) | 250 |
| BsaJI | CCNNGG | 6 cut(s) | 195, 312, 559, 684, 906, 915 |
| BsaWI | WCCGGW | 1 cut(s) | 1120 |
| BsaXI | ACNNNNNCTCC | 8 cut(s) | 62, 92, 122, 152, 936, 966, 987, 1017 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 182, 560, 671, 785, 818, 1058 |
| Bse118I | RCCGGY | 1 cut(s) | 425 |
| Bse8I | GATNNNNATC | 1 cut(s) | 21 |
| BseAI | TCCGGA | 1 cut(s) | 1120 |
| BseBI | CCWGG | 3 cut(s) | 121, 142, 1386 |
| BseCI | ATCGAT | 1 cut(s) | 972 |
| BseDI | CCNNGG | 6 cut(s) | 195, 312, 559, 684, 906, 915 |
| BseGI | GGATG | 3 cut(s) | 107, 1012, 1129 |
| BseJI | GATNNNNATC | 1 cut(s) | 21 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 182, 560, 671, 785, 818, 1058 |
| BseMII | CTCAG | 3 cut(s) | 1020, 1352, 1364 |
| BseRI | GAGGAG | 2 cut(s) | 70, 1041 |
| BseSI | GKGCMC | 1 cut(s) | 1315 |
| BseXI | GCAGC | 5 cut(s) | 136, 561, 941, 944, 1088 |
| BseYI | CCCAGC | 2 cut(s) | 222, 1058 |
| BsgI | GTGCAG | 1 cut(s) | 1243 |
| Bsh1285I | CGRYCG | 1 cut(s) | 261 |
| BshFI | GGCC | 4 cut(s) | 186, 227, 441, 567 |
| BshNI | GGYRCC | 1 cut(s) | 1406 |
| BshVI | ATCGAT | 1 cut(s) | 972 |
| BsiEI | CGRYCG | 1 cut(s) | 261 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1315 |
| BsiHKCI | CYCGRG | 1 cut(s) | 907 |
| BsiSI | CCGG | 6 cut(s) | 362, 426, 438, 842, 915, 1121 |
| BslFI | GGGAC | 2 cut(s) | 850, 997 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 182, 560, 671, 785, 818, 1058 |
| BsmAI | GTCTC | 1 cut(s) | 250 |
| BsmFI | GGGAC | 2 cut(s) | 850, 997 |
| BsmI | GAATGC | 1 cut(s) | 751 |
| BsnI | GGCC | 4 cut(s) | 186, 227, 441, 567 |
| Bso31I | GGTCTC | 1 cut(s) | 250 |
| BsoBI | CYCGRG | 1 cut(s) | 907 |
| Bsp119I | TTCGAA | 1 cut(s) | 659 |
| Bsp1286I | GDGCHC | 2 cut(s) | 914, 1315 |
| Bsp13I | TCCGGA | 1 cut(s) | 1120 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 846 |
| Bsp19I | CCATGG | 2 cut(s) | 195, 312 |
| BspANI | GGCC | 4 cut(s) | 186, 227, 441, 567 |
| BspCNI | CTCAG | 3 cut(s) | 1021, 1353, 1365 |
| BspDI | ATCGAT | 1 cut(s) | 972 |
| BspEI | TCCGGA | 1 cut(s) | 1120 |
| BspLI | GGNNCC | 6 cut(s) | 37, 146, 187, 810, 913, 1408 |
| BspMAI | CTGCAG | 2 cut(s) | 931, 1078 |
| BspPI | GGATC | 8 cut(s) | 30, 43, 45, 803, 811, 816, 872, 1376 |
| BspT104I | TTCGAA | 1 cut(s) | 659 |
| BspT107I | GGYRCC | 1 cut(s) | 1406 |
| BspTNI | GGTCTC | 1 cut(s) | 250 |
| BsrBI | CCGCTC | 1 cut(s) | 588 |
| BsrFI | RCCGGY | 1 cut(s) | 425 |
| BssAI | RCCGGY | 1 cut(s) | 425 |
| BssECI | CCNNGG | 6 cut(s) | 195, 312, 559, 684, 906, 915 |
| BssNI | GRCGYC | 1 cut(s) | 365 |
| BssT1I | CCWWGG | 2 cut(s) | 195, 312 |
| Bst2UI | CCWGG | 3 cut(s) | 121, 142, 1386 |
| Bst4CI | ACNGT | 2 cut(s) | 1369, 1428 |
| BstACI | GRCGYC | 1 cut(s) | 365 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 779 |
| BstBI | TTCGAA | 1 cut(s) | 659 |
| BstC8I | GCNNGC | 1 cut(s) | 1311 |
| BstDEI | CTNAG | 6 cut(s) | 546, 621, 846, 1029, 1361, 1373 |
| BstDSI | CCRYGG | 3 cut(s) | 195, 312, 684 |
| BstF5I | GGATG | 3 cut(s) | 107, 1012, 1129 |
| BstMAI | GTCTC | 1 cut(s) | 250 |
| BstMCI | CGRYCG | 1 cut(s) | 261 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 233, 362, 564, 708, 779, 926, 1076 |
| BstNI | CCWGG | 3 cut(s) | 121, 142, 1386 |
| BstSCI | CCNGG | 4 cut(s) | 119, 140, 914, 1384 |
| BstSFI | CTRYAG | 3 cut(s) | 927, 1074, 1149 |
| BstSLI | GKGCMC | 1 cut(s) | 1315 |
| BstV1I | GCAGC | 5 cut(s) | 136, 561, 941, 944, 1088 |
| BstV2I | GAAGAC | 1 cut(s) | 1034 |
| BstX2I | RGATCY | 4 cut(s) | 35, 50, 808, 1357 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 196 |
| BstYI | RGATCY | 4 cut(s) | 35, 50, 808, 1357 |
| Bsu15I | ATCGAT | 1 cut(s) | 972 |
| BsuI | GTATCC | 1 cut(s) | 1128 |
| BsuRI | GGCC | 4 cut(s) | 186, 227, 441, 567 |
| BsuTUI | ATCGAT | 1 cut(s) | 972 |
| BtgI | CCRYGG | 3 cut(s) | 195, 312, 684 |
| BtsCI | GGATG | 3 cut(s) | 107, 1012, 1129 |
| BtsI | GCAGTG | 2 cut(s) | 407, 880 |
| BtsIMutI | CAGTG | 2 cut(s) | 407, 880 |
| Cac8I | GCNNGC | 1 cut(s) | 1311 |
| Cfr10I | RCCGGY | 1 cut(s) | 425 |
| Cfr13I | GGNCC | 4 cut(s) | 144, 185, 225, 566 |
| ClaI | ATCGAT | 1 cut(s) | 972 |
| CseI | GACGC | 1 cut(s) | 354 |
| Csp6I | GTAC | 6 cut(s) | 330, 504, 543, 1237, 1304, 1339 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 442, 477 |
| CviAII | CATG | 2 cut(s) | 196, 313 |
| CviQI | GTAC | 6 cut(s) | 330, 504, 543, 1237, 1304, 1339 |
| DdeI | CTNAG | 6 cut(s) | 546, 621, 846, 1029, 1361, 1373 |
| DriI | GACNNNNNGTC | 1 cut(s) | 1198 |
| EaeI | YGGCCR | 1 cut(s) | 439 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 1198 |
| EciI | GGCGGA | 1 cut(s) | 1014 |
| Eco130I | CCWWGG | 2 cut(s) | 195, 312 |
| Eco24I | GRGCYC | 1 cut(s) | 914 |
| Eco31I | GGTCTC | 1 cut(s) | 250 |
| Eco47I | GGWCC | 1 cut(s) | 144 |
| Eco57I | CTGAAG | 1 cut(s) | 1374 |
| Eco88I | CYCGRG | 1 cut(s) | 907 |
| EcoO109I | RGGNCCY | 1 cut(s) | 566 |
| EcoRI | GAATTC | 1 cut(s) | 4 |
| EcoRII | CCWGG | 3 cut(s) | 119, 140, 1384 |
| EcoT14I | CCWWGG | 2 cut(s) | 195, 312 |
| EcoT38I | GRGCYC | 1 cut(s) | 914 |
| ErhI | CCWWGG | 2 cut(s) | 195, 312 |
| FaeI | CATG | 2 cut(s) | 199, 316 |
| FaiI | YATR | 9 cut(s) | 197, 314, 584, 800, 890, 1013, 1221, 1323, 1331 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1195, 1227 |
| FaqI | GGGAC | 2 cut(s) | 850, 997 |
| FatI | CATG | 2 cut(s) | 195, 312 |
| FauI | CCCGC | 2 cut(s) | 124, 163 |
| FblI | GTMKAC | 1 cut(s) | 866 |
| Fnu4HI | GCNGC | 7 cut(s) | 125, 575, 610, 930, 933, 1077, 1170 |
| FokI | GGATG | 3 cut(s) | 94, 1019, 1136 |
| FriOI | GRGCYC | 1 cut(s) | 914 |
| Fsp4HI | GCNGC | 7 cut(s) | 125, 575, 610, 930, 933, 1077, 1170 |
| FspBI | CTAG | 8 cut(s) | 432, 489, 507, 534, 768, 870, 1271, 1438 |
| GluI | GCNGC | 7 cut(s) | 125, 575, 610, 930, 933, 1077, 1170 |
| GsaI | CCCAGC | 2 cut(s) | 226, 1062 |
| GsuI | CTGGAG | 2 cut(s) | 498, 1038 |
| HaeIII | GGCC | 4 cut(s) | 186, 227, 441, 567 |
| HapII | CCGG | 6 cut(s) | 362, 426, 438, 842, 915, 1121 |
| HgaI | GACGC | 1 cut(s) | 354 |
| Hin1I | GRCGYC | 1 cut(s) | 365 |
| Hin1II | CATG | 2 cut(s) | 199, 316 |
| HincII | GTYRAC | 1 cut(s) | 271 |
| HindII | GTYRAC | 1 cut(s) | 271 |
| HinfI | GANTC | 5 cut(s) | 404, 550, 838, 853, 969 |
| HpaII | CCGG | 6 cut(s) | 362, 426, 438, 842, 915, 1121 |
| HphI | GGTGA | 2 cut(s) | 839, 1406 |
| Hpy166II | GTNNAC | 3 cut(s) | 271, 867, 1313 |
| Hpy188III | TCNNGA | 6 cut(s) | 468, 477, 966, 1121, 1160, 1271 |
| Hpy8I | GTNNAC | 3 cut(s) | 271, 867, 1313 |
| Hpy99I | CGWCG | 2 cut(s) | 269, 370 |
| HpyAV | CCTTC | 3 cut(s) | 94, 249, 579 |
| HpyCH4III | ACNGT | 2 cut(s) | 1369, 1428 |
| HpyCH4IV | ACGT | 1 cut(s) | 1194 |
| HpyCH4V | TGCA | 6 cut(s) | 773, 929, 1076, 1260, 1313, 1400 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 233, 362, 564, 708, 779, 926, 1076 |
| HpyF3I | CTNAG | 6 cut(s) | 546, 621, 846, 1029, 1361, 1373 |
| HpySE526I | ACGT | 1 cut(s) | 1194 |
| Hsp92I | GRCGYC | 1 cut(s) | 365 |
| Hsp92II | CATG | 2 cut(s) | 199, 316 |
| Kpn2I | TCCGGA | 1 cut(s) | 1120 |
| LmnI | GCTCC | 3 cut(s) | 699, 754, 917 |
| Lsp1109I | GCAGC | 5 cut(s) | 136, 561, 941, 944, 1088 |
| LweI | GCATC | 1 cut(s) | 1114 |
| MaeI | CTAG | 8 cut(s) | 432, 489, 507, 534, 768, 870, 1271, 1438 |
| MaeII | ACGT | 1 cut(s) | 1194 |
| MaeIII | GTNAC | 1 cut(s) | 1388 |
| MbiI | CCGCTC | 1 cut(s) | 588 |
| MboII | GAAGA | 3 cut(s) | 202, 1034, 1367 |
| MfeI | CAATTG | 1 cut(s) | 454 |
| MflI | RGATCY | 4 cut(s) | 35, 50, 808, 1357 |
| MhlI | GDGCHC | 2 cut(s) | 914, 1315 |
| MluCI | AATT | 3 cut(s) | 4, 454, 1099 |
| MlyI | GAGTC | 2 cut(s) | 559, 832 |
| MmeI | TCCRAC | 5 cut(s) | 33, 63, 580, 923, 928 |
| MroI | TCCGGA | 1 cut(s) | 1120 |
| MseI | TTAA | 3 cut(s) | 498, 528, 678 |
| MslI | CAYNNNNRTG | 1 cut(s) | 194 |
| MspA1I | CMGCKG | 2 cut(s) | 668, 1058 |
| MspI | CCGG | 6 cut(s) | 362, 426, 438, 842, 915, 1121 |
| MspR9I | CCNGG | 4 cut(s) | 121, 142, 916, 1386 |
| MunI | CAATTG | 1 cut(s) | 454 |
| Mva1269I | GAATGC | 1 cut(s) | 751 |
| MvaI | CCWGG | 3 cut(s) | 121, 142, 1386 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 233, 362, 564, 708, 779, 926, 1076 |
| NciI | CCSGG | 1 cut(s) | 916 |
| NcoI | CCATGG | 2 cut(s) | 195, 312 |
| NlaIII | CATG | 2 cut(s) | 199, 316 |
| NlaIV | GGNNCC | 6 cut(s) | 37, 146, 187, 810, 913, 1408 |
| NspV | TTCGAA | 1 cut(s) | 659 |
| PctI | GAATGC | 1 cut(s) | 751 |
| PfeI | GAWTC | 3 cut(s) | 404, 853, 969 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 671 |
| PfoI | TCCNGGA | 1 cut(s) | 140 |
| PkrI | GCNGC | 7 cut(s) | 126, 576, 611, 931, 934, 1078, 1171 |
| Ple19I | CGATCG | 1 cut(s) | 261 |
| PleI | GAGTC | 2 cut(s) | 558, 832 |
| PpsI | GAGTC | 2 cut(s) | 558, 832 |
| PshBI | ATTAAT | 1 cut(s) | 498 |
| PsiI | TTATAA | 1 cut(s) | 1221 |
| Psp6I | CCWGG | 3 cut(s) | 119, 140, 1384 |
| PspFI | CCCAGC | 2 cut(s) | 222, 1058 |
| PspGI | CCWGG | 3 cut(s) | 119, 140, 1384 |
| PspN4I | GGNNCC | 6 cut(s) | 37, 146, 187, 810, 913, 1408 |
| PspPI | GGNCC | 4 cut(s) | 144, 185, 225, 566 |
| PstI | CTGCAG | 2 cut(s) | 931, 1078 |
| PsuI | RGATCY | 4 cut(s) | 35, 50, 808, 1357 |
| PvuI | CGATCG | 1 cut(s) | 261 |
| PvuII | CAGCTG | 2 cut(s) | 668, 1058 |
| RsaI | GTAC | 6 cut(s) | 331, 505, 544, 1238, 1305, 1340 |
| RsaNI | GTAC | 6 cut(s) | 330, 504, 543, 1237, 1304, 1339 |
| RseI | CAYNNNNRTG | 1 cut(s) | 194 |
| SaqAI | TTAA | 3 cut(s) | 498, 528, 678 |
| SatI | GCNGC | 7 cut(s) | 125, 575, 610, 930, 933, 1077, 1170 |
| Sau96I | GGNCC | 4 cut(s) | 144, 185, 225, 566 |
| ScaI | AGTACT | 2 cut(s) | 505, 544 |
| SchI | GAGTC | 2 cut(s) | 559, 832 |
| ScrFI | CCNGG | 4 cut(s) | 121, 142, 916, 1386 |
| SduI | GDGCHC | 2 cut(s) | 914, 1315 |
| SfaNI | GCATC | 1 cut(s) | 1114 |
| SfcI | CTRYAG | 3 cut(s) | 927, 1074, 1149 |
| SfuI | TTCGAA | 1 cut(s) | 659 |
| SgrAI | CRCCGGYG | 1 cut(s) | 425 |
| SinI | GGWCC | 1 cut(s) | 144 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 194 |
| SmlI | CTYRAG | 2 cut(s) | 1034, 1160 |
| SmoI | CTYRAG | 2 cut(s) | 1034, 1160 |
| SpeI | ACTAGT | 1 cut(s) | 506 |
| Sse9I | AATT | 3 cut(s) | 4, 454, 1099 |
| SspMI | CTAG | 8 cut(s) | 432, 489, 507, 534, 768, 870, 1271, 1438 |
| StyD4I | CCNGG | 4 cut(s) | 119, 140, 914, 1384 |
| StyI | CCWWGG | 2 cut(s) | 195, 312 |
| TaaI | ACNGT | 2 cut(s) | 1369, 1428 |
| TaiI | ACGT | 1 cut(s) | 1197 |
| TaqI | TCGA | 7 cut(s) | 15, 21, 368, 386, 659, 972, 1022 |
| TaqII | GACCGA | 1 cut(s) | 232 |
| TasI | AATT | 3 cut(s) | 4, 454, 1099 |
| TatI | WGTACW | 4 cut(s) | 503, 542, 1236, 1338 |
| TauI | GCSGC | 2 cut(s) | 612, 1172 |
| TfiI | GAWTC | 3 cut(s) | 404, 853, 969 |
| Tru1I | TTAA | 3 cut(s) | 498, 528, 678 |
| Tru9I | TTAA | 3 cut(s) | 498, 528, 678 |
| TscAI | CASTG | 2 cut(s) | 414, 880 |
| TseI | GCWGC | 5 cut(s) | 124, 574, 929, 932, 1076 |
| TspDTI | ATGAA | 2 cut(s) | 17, 1299 |
| TspGWI | ACGGA | 2 cut(s) | 801, 1001 |
| TspRI | CASTG | 2 cut(s) | 414, 880 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 671 |
| VneI | GTGCAC | 1 cut(s) | 1311 |
| VpaK11BI | GGWCC | 1 cut(s) | 144 |
| VspI | ATTAAT | 1 cut(s) | 498 |
| XapI | RAATTY | 1 cut(s) | 4 |
| XbaI | TCTAGA | 1 cut(s) | 1270 |
| XmiI | GTMKAC | 1 cut(s) | 866 |
| XspI | CTAG | 8 cut(s) | 432, 489, 507, 534, 768, 870, 1271, 1438 |
| ZrmI | AGTACT | 2 cut(s) | 505, 544 |