cellular component assembly
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G16760 AT3G16760 |
| fragaria_vesca | FvH4_2g05641 FvH4_4g18770 FvH4_4g18770 FvH4_5g32471 FvH4_5g32480 |
| malus_domestica | MD13G1163500.v1.1 MD16G1163000.v1.1 |
| prunus_persica | Prupe.1G130400_v2.0.a1 |
| pyrus_communis | pycom13g13930 pycom16g13810 |
| rosa_chinensis | RchiOBHm_Chr4g0423561 |
| rosa_laevigata | RLG00000007547 |
| rosa_multiflora | Rmu_sc0004342.1_g000013 Rmu_sc0008281.1_g000006 |
| rosa_roxburghii | Rroxscaffold_5G00365790 |
| rosa_rugosa | Rorug04G0188700 |
| rosa_samantha | Rh4AG248200 Rh4BG253400 Rh4CG261500 Rh4DG248700 |
| rosa_wichuraiana | Rw4G021260 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 179 |
| AccI | GTMKAC | 1 cut(s) | 120 |
| AciI | CCGC | 7 cut(s) | 41, 45, 76, 287, 359, 372, 411 |
| AclWI | GGATC | 1 cut(s) | 278 |
| AcoI | YGGCCR | 1 cut(s) | 42 |
| AcsI | RAATTY | 1 cut(s) | 202 |
| AcuI | CTGAAG | 2 cut(s) | 249, 320 |
| AcyI | GRCGYC | 1 cut(s) | 176 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 156 |
| AgsI | TTSAA | 1 cut(s) | 367 |
| AjnI | CCWGG | 2 cut(s) | 374, 395 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 317, 349 |
| AluBI | AGCT | 4 cut(s) | 115, 190, 277, 304 |
| AluI | AGCT | 4 cut(s) | 115, 190, 277, 304 |
| Alw26I | GTCTC | 1 cut(s) | 167 |
| AlwI | GGATC | 1 cut(s) | 278 |
| AoxI | GGCC | 2 cut(s) | 42, 127 |
| ApeKI | GCWGC | 3 cut(s) | 10, 190, 379 |
| ApoI | RAATTY | 1 cut(s) | 202 |
| AspS9I | GGNCC | 1 cut(s) | 399 |
| AvaII | GGWCC | 1 cut(s) | 399 |
| BbvI | GCAGC | 3 cut(s) | 22, 177, 391 |
| BccI | CCATC | 2 cut(s) | 178, 315 |
| BceAI | ACGGC | 1 cut(s) | 142 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 172, 206 |
| BciT130I | CCWGG | 2 cut(s) | 376, 397 |
| BcoDI | GTCTC | 1 cut(s) | 167 |
| BfaI | CTAG | 2 cut(s) | 116, 421 |
| BisI | GCNGC | 5 cut(s) | 11, 42, 45, 191, 380 |
| BlsI | GCNGC | 5 cut(s) | 12, 43, 46, 192, 381 |
| Bme1390I | CCNGG | 2 cut(s) | 376, 397 |
| Bme18I | GGWCC | 1 cut(s) | 399 |
| BmgT120I | GGNCC | 1 cut(s) | 399 |
| BmiI | GGNNCC | 1 cut(s) | 401 |
| BmrFI | CCNGG | 2 cut(s) | 376, 397 |
| BsaHI | GRCGYC | 1 cut(s) | 176 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 317, 347, 377, 407 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 156 |
| BseBI | CCWGG | 2 cut(s) | 376, 397 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 156 |
| BseMII | CTCAG | 1 cut(s) | 120 |
| BseRI | GAGGAG | 1 cut(s) | 325 |
| BseX3I | CGGCCG | 1 cut(s) | 42 |
| BseXI | GCAGC | 3 cut(s) | 22, 177, 391 |
| Bsh1285I | CGRYCG | 1 cut(s) | 45 |
| BshFI | GGCC | 2 cut(s) | 44, 129 |
| BsiEI | CGRYCG | 1 cut(s) | 45 |
| BslFI | GGGAC | 1 cut(s) | 133 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 156 |
| BsmAI | GTCTC | 1 cut(s) | 167 |
| BsmBI | CGTCTC | 1 cut(s) | 167 |
| BsmFI | GGGAC | 1 cut(s) | 133 |
| BsmI | GAATGC | 1 cut(s) | 289 |
| BsnI | GGCC | 2 cut(s) | 44, 129 |
| Bsp143I | GATC | 1 cut(s) | 283 |
| BspACI | CCGC | 7 cut(s) | 41, 45, 76, 287, 359, 372, 411 |
| BspANI | GGCC | 2 cut(s) | 44, 129 |
| BspCNI | CTCAG | 1 cut(s) | 119 |
| BspLI | GGNNCC | 1 cut(s) | 401 |
| BspPI | GGATC | 1 cut(s) | 278 |
| BssMI | GATC | 1 cut(s) | 283 |
| BssNI | GRCGYC | 1 cut(s) | 176 |
| Bst2UI | CCWGG | 2 cut(s) | 376, 397 |
| BstACI | GRCGYC | 1 cut(s) | 176 |
| BstC8I | GCNNGC | 1 cut(s) | 195 |
| BstDEI | CTNAG | 1 cut(s) | 106 |
| BstKTI | GATC | 1 cut(s) | 286 |
| BstMAI | GTCTC | 1 cut(s) | 167 |
| BstMBI | GATC | 1 cut(s) | 283 |
| BstMCI | CGRYCG | 1 cut(s) | 45 |
| BstNI | CCWGG | 2 cut(s) | 376, 397 |
| BstSCI | CCNGG | 2 cut(s) | 374, 395 |
| BstV1I | GCAGC | 3 cut(s) | 22, 177, 391 |
| BstX2I | RGATCY | 1 cut(s) | 283 |
| BstYI | RGATCY | 1 cut(s) | 283 |
| BstZI | CGGCCG | 1 cut(s) | 42 |
| BsuRI | GGCC | 2 cut(s) | 44, 129 |
| BtgZI | GCGATG | 1 cut(s) | 197 |
| BtsI | GCAGTG | 1 cut(s) | 53 |
| BtsIMutI | CAGTG | 2 cut(s) | 53, 114 |
| Cac8I | GCNNGC | 1 cut(s) | 195 |
| CciNI | GCGGCCGC | 1 cut(s) | 42 |
| Cfr13I | GGNCC | 1 cut(s) | 399 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 90, 125 |
| DdeI | CTNAG | 1 cut(s) | 106 |
| DpnI | GATC | 1 cut(s) | 285 |
| DpnII | GATC | 1 cut(s) | 283 |
| EaeI | YGGCCR | 1 cut(s) | 42 |
| EagI | CGGCCG | 1 cut(s) | 42 |
| EclXI | CGGCCG | 1 cut(s) | 42 |
| Eco47I | GGWCC | 1 cut(s) | 399 |
| Eco52I | CGGCCG | 1 cut(s) | 42 |
| Eco57I | CTGAAG | 2 cut(s) | 249, 320 |
| EcoRII | CCWGG | 2 cut(s) | 374, 395 |
| EcoT22I | ATGCAT | 1 cut(s) | 214 |
| Esp3I | CGTCTC | 1 cut(s) | 167 |
| FaiI | YATR | 1 cut(s) | 26 |
| FaqI | GGGAC | 1 cut(s) | 133 |
| FauI | CCCGC | 3 cut(s) | 83, 379, 418 |
| FblI | GTMKAC | 1 cut(s) | 120 |
| Fnu4HI | GCNGC | 5 cut(s) | 11, 42, 45, 191, 380 |
| Fsp4HI | GCNGC | 5 cut(s) | 11, 42, 45, 191, 380 |
| FspBI | CTAG | 2 cut(s) | 116, 421 |
| GluI | GCNGC | 5 cut(s) | 11, 42, 45, 191, 380 |
| HaeIII | GGCC | 2 cut(s) | 44, 129 |
| Hin1I | GRCGYC | 1 cut(s) | 176 |
| HincII | GTYRAC | 2 cut(s) | 30, 121 |
| HindII | GTYRAC | 2 cut(s) | 30, 121 |
| HindIII | AAGCTT | 1 cut(s) | 275 |
| HinfI | GANTC | 2 cut(s) | 62, 135 |
| Hpy166II | GTNNAC | 2 cut(s) | 30, 121 |
| Hpy188I | TCNGA | 4 cut(s) | 37, 67, 229, 300 |
| Hpy188III | TCNNGA | 1 cut(s) | 245 |
| Hpy8I | GTNNAC | 2 cut(s) | 30, 121 |
| Hpy99I | CGWCG | 2 cut(s) | 10, 181 |
| HpyAV | CCTTC | 2 cut(s) | 140, 349 |
| HpyCH4IV | ACGT | 1 cut(s) | 176 |
| HpyCH4V | TGCA | 1 cut(s) | 212 |
| HpyF3I | CTNAG | 1 cut(s) | 106 |
| HpySE526I | ACGT | 1 cut(s) | 176 |
| Hsp92I | GRCGYC | 1 cut(s) | 176 |
| Kzo9I | GATC | 1 cut(s) | 283 |
| LmnI | GCTCC | 3 cut(s) | 112, 187, 309 |
| LpnPI | CCDG | 7 cut(s) | 30, 72, 211, 361, 382, 388, 409 |
| Lsp1109I | GCAGC | 3 cut(s) | 22, 177, 391 |
| MaeI | CTAG | 2 cut(s) | 116, 421 |
| MaeII | ACGT | 1 cut(s) | 176 |
| MalI | GATC | 1 cut(s) | 285 |
| MboI | GATC | 1 cut(s) | 283 |
| MboII | GAAGA | 2 cut(s) | 213, 242 |
| MflI | RGATCY | 1 cut(s) | 283 |
| MluCI | AATT | 1 cut(s) | 202 |
| MmeI | TCCRAC | 1 cut(s) | 263 |
| MnlI | CCTC | 5 cut(s) | 31, 255, 343, 346, 403 |
| Mph1103I | ATGCAT | 1 cut(s) | 214 |
| MspR9I | CCNGG | 2 cut(s) | 376, 397 |
| Mva1269I | GAATGC | 1 cut(s) | 289 |
| MvaI | CCWGG | 2 cut(s) | 376, 397 |
| NdeII | GATC | 1 cut(s) | 283 |
| NlaIV | GGNNCC | 1 cut(s) | 401 |
| NotI | GCGGCCGC | 1 cut(s) | 42 |
| NsiI | ATGCAT | 1 cut(s) | 214 |
| PctI | GAATGC | 1 cut(s) | 289 |
| PfeI | GAWTC | 2 cut(s) | 62, 135 |
| PfoI | TCCNGGA | 1 cut(s) | 395 |
| PkrI | GCNGC | 5 cut(s) | 12, 43, 46, 192, 381 |
| Psp6I | CCWGG | 2 cut(s) | 374, 395 |
| PspGI | CCWGG | 2 cut(s) | 374, 395 |
| PspN4I | GGNNCC | 1 cut(s) | 401 |
| PspPI | GGNCC | 1 cut(s) | 399 |
| PsuI | RGATCY | 1 cut(s) | 283 |
| SalI | GTCGAC | 1 cut(s) | 119 |
| SatI | GCNGC | 5 cut(s) | 11, 42, 45, 191, 380 |
| Sau3AI | GATC | 1 cut(s) | 283 |
| Sau96I | GGNCC | 1 cut(s) | 399 |
| ScrFI | CCNGG | 2 cut(s) | 376, 397 |
| SetI | ASST | 7 cut(s) | 117, 179, 192, 279, 306, 395, 422 |
| SinI | GGWCC | 1 cut(s) | 399 |
| Sse9I | AATT | 1 cut(s) | 202 |
| SsiI | CCGC | 7 cut(s) | 41, 45, 76, 287, 359, 372, 411 |
| SspMI | CTAG | 2 cut(s) | 116, 421 |
| StyD4I | CCNGG | 2 cut(s) | 374, 395 |
| TaiI | ACGT | 1 cut(s) | 179 |
| TaqI | TCGA | 4 cut(s) | 120, 133, 260, 315 |
| TaqII | GACCGA | 1 cut(s) | 147 |
| TasI | AATT | 1 cut(s) | 202 |
| TauI | GCSGC | 2 cut(s) | 44, 47 |
| TfiI | GAWTC | 2 cut(s) | 62, 135 |
| TscAI | CASTG | 2 cut(s) | 60, 114 |
| TseI | GCWGC | 3 cut(s) | 10, 190, 379 |
| TspDTI | ATGAA | 2 cut(s) | 179, 213 |
| TspRI | CASTG | 2 cut(s) | 60, 114 |
| VpaK11BI | GGWCC | 1 cut(s) | 399 |
| XapI | RAATTY | 1 cut(s) | 202 |
| XmiI | GTMKAC | 1 cut(s) | 120 |
| XspI | CTAG | 2 cut(s) | 116, 421 |
| ZraI | GACGTC | 1 cut(s) | 177 |
| Zsp2I | ATGCAT | 1 cut(s) | 214 |