cellular component assembly
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G16760 AT3G16760 |
| fragaria_vesca | FvH4_2g05641 FvH4_4g18770 FvH4_4g18770 FvH4_5g32471 FvH4_5g32480 |
| malus_domestica | MD13G1163500.v1.1 MD16G1163000.v1.1 |
| prunus_persica | Prupe.1G130400_v2.0.a1 |
| pyrus_communis | pycom13g13930 pycom16g13810 |
| rosa_chinensis | RchiOBHm_Chr4g0423561 |
| rosa_laevigata | RLG00000007547 |
| rosa_multiflora | Rmu_sc0004342.1_g000013 Rmu_sc0008281.1_g000006 |
| rosa_roxburghii | Rroxscaffold_5G00365790 |
| rosa_rugosa | Rorug04G0188700 |
| rosa_samantha | Rh4AG248200 Rh4BG253400 Rh4CG261500 Rh4DG248700 |
| rosa_wichuraiana | Rw4G021260 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 1424 |
| AccB7I | CCANNNNNTGG | 3 cut(s) | 141, 429, 668 |
| AccBSI | CCGCTC | 1 cut(s) | 158 |
| AccI | GTMKAC | 1 cut(s) | 884 |
| AclWI | GGATC | 5 cut(s) | 30, 43, 713, 890, 1394 |
| AcoI | YGGCCR | 1 cut(s) | 246 |
| AcsI | RAATTY | 1 cut(s) | 4 |
| AcuI | CTGAAG | 1 cut(s) | 1412 |
| AcyI | GRCGYC | 1 cut(s) | 170 |
| AdeI | CACNNNGTG | 1 cut(s) | 429 |
| AfaI | GTAC | 5 cut(s) | 757, 972, 1256, 1323, 1358 |
| AfiI | CCNNNNNNNGG | 7 cut(s) | 141, 179, 429, 539, 668, 788, 1076 |
| AflIII | ACRYGT | 1 cut(s) | 906 |
| AgsI | TTSAA | 1 cut(s) | 369 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 1216 |
| AjnI | CCWGG | 2 cut(s) | 116, 1402 |
| AjuI | GAANNNNNNNTTGG | 3 cut(s) | 34, 979, 1011 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 62, 94 |
| AluBI | AGCT | 6 cut(s) | 303, 378, 1051, 1076, 1190, 1229 |
| AluI | AGCT | 6 cut(s) | 303, 378, 1051, 1076, 1190, 1229 |
| Alw21I | GWGCWC | 2 cut(s) | 380, 1333 |
| Alw26I | GTCTC | 1 cut(s) | 35 |
| Alw44I | GTGCAC | 1 cut(s) | 1329 |
| AlwI | GGATC | 5 cut(s) | 30, 43, 713, 890, 1394 |
| AoxI | GGCC | 6 cut(s) | 162, 181, 222, 246, 544, 1057 |
| ApaLI | GTGCAC | 1 cut(s) | 1329 |
| ApeKI | GCWGC | 6 cut(s) | 100, 121, 333, 693, 1094, 1187 |
| ApoI | RAATTY | 1 cut(s) | 4 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 613 |
| AspS9I | GGNCC | 7 cut(s) | 144, 163, 182, 222, 545, 855, 1057 |
| AsuC2I | CCSGG | 1 cut(s) | 860 |
| AsuHPI | GGTGA | 2 cut(s) | 857, 1424 |
| AsuNHI | GCTAGC | 1 cut(s) | 785 |
| AvaII | GGWCC | 2 cut(s) | 144, 855 |
| BaeGI | GKGCMC | 1 cut(s) | 1333 |
| BamHI | GGATCC | 1 cut(s) | 35 |
| BanI | GGYRCC | 1 cut(s) | 1424 |
| BanII | GRGCYC | 1 cut(s) | 380 |
| Bbv12I | GWGCWC | 2 cut(s) | 380, 1333 |
| BbvI | GCAGC | 6 cut(s) | 112, 133, 345, 705, 1106, 1199 |
| BccI | CCATC | 3 cut(s) | 112, 382, 670 |
| BceAI | ACGGC | 2 cut(s) | 196, 696 |
| BciT130I | CCWGG | 2 cut(s) | 118, 1404 |
| BciVI | GTATCC | 1 cut(s) | 1146 |
| BcnI | CCSGG | 1 cut(s) | 860 |
| BcoDI | GTCTC | 1 cut(s) | 35 |
| BfaI | CTAG | 4 cut(s) | 471, 786, 888, 1456 |
| BfmI | CTRYAG | 2 cut(s) | 1092, 1167 |
| BfuI | GTATCC | 1 cut(s) | 1146 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 543 |
| BisI | GCNGC | 9 cut(s) | 101, 122, 334, 694, 768, 790, 948, 1095, 1188 |
| BlpI | GCTNAGC | 1 cut(s) | 864 |
| BlsI | GCNGC | 9 cut(s) | 102, 123, 335, 695, 769, 791, 949, 1096, 1189 |
| Bme1390I | CCNGG | 3 cut(s) | 118, 860, 1404 |
| Bme18I | GGWCC | 2 cut(s) | 144, 855 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 1216 |
| BmgT120I | GGNCC | 7 cut(s) | 144, 163, 182, 222, 545, 855, 1057 |
| BmiI | GGNNCC | 6 cut(s) | 37, 146, 856, 857, 1039, 1426 |
| BmrFI | CCNGG | 3 cut(s) | 118, 860, 1404 |
| BmsI | GCATC | 4 cut(s) | 662, 779, 1132, 1291 |
| BmtI | GCTAGC | 1 cut(s) | 789 |
| BpmI | CTGGAG | 1 cut(s) | 1056 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 864 |
| BpuEI | CTTGAG | 2 cut(s) | 1073, 1199 |
| BpuMI | CCSGG | 1 cut(s) | 860 |
| BsaBI | GATNNNNATC | 1 cut(s) | 21 |
| BsaHI | GRCGYC | 1 cut(s) | 170 |
| BsaI | GGTCTC | 1 cut(s) | 35 |
| BsaJI | CCNNGG | 5 cut(s) | 192, 309, 538, 858, 924 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 954, 984, 1005, 1035 |
| Bsc4I | CCNNNNNNNGG | 7 cut(s) | 141, 179, 429, 539, 668, 788, 1076 |
| Bse118I | RCCGGY | 1 cut(s) | 230 |
| Bse3DI | GCAATG | 2 cut(s) | 343, 574 |
| Bse8I | GATNNNNATC | 1 cut(s) | 21 |
| BseBI | CCWGG | 2 cut(s) | 118, 1404 |
| BseDI | CCNNGG | 5 cut(s) | 192, 309, 538, 858, 924 |
| BseGI | GGATG | 2 cut(s) | 104, 920 |
| BseJI | GATNNNNATC | 1 cut(s) | 21 |
| BseLI | CCNNNNNNNGG | 7 cut(s) | 141, 179, 429, 539, 668, 788, 1076 |
| BseMI | GCAATG | 2 cut(s) | 343, 574 |
| BseMII | CTCAG | 1 cut(s) | 1038 |
| BseRI | GAGGAG | 3 cut(s) | 787, 1059, 1396 |
| BseSI | GKGCMC | 1 cut(s) | 1333 |
| BseXI | GCAGC | 6 cut(s) | 112, 133, 345, 705, 1106, 1199 |
| BseYI | CCCAGC | 1 cut(s) | 1076 |
| BsgI | GTGCAG | 1 cut(s) | 1261 |
| BshFI | GGCC | 6 cut(s) | 164, 183, 224, 248, 546, 1059 |
| BshNI | GGYRCC | 1 cut(s) | 1424 |
| BsiHKAI | GWGCWC | 2 cut(s) | 380, 1333 |
| BsiSI | CCGG | 5 cut(s) | 161, 231, 362, 782, 860 |
| BslFI | GGGAC | 2 cut(s) | 868, 1015 |
| BslI | CCNNNNNNNGG | 7 cut(s) | 141, 179, 429, 539, 668, 788, 1076 |
| BsmAI | GTCTC | 1 cut(s) | 35 |
| BsmFI | GGGAC | 2 cut(s) | 868, 1015 |
| BsmI | GAATGC | 2 cut(s) | 358, 745 |
| BsnI | GGCC | 6 cut(s) | 164, 183, 224, 248, 546, 1059 |
| Bso31I | GGTCTC | 1 cut(s) | 35 |
| Bsp1286I | GDGCHC | 2 cut(s) | 380, 1333 |
| Bsp143I | GATC | 8 cut(s) | 22, 35, 50, 495, 646, 718, 895, 1399 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 864 |
| Bsp19I | CCATGG | 2 cut(s) | 192, 309 |
| BspANI | GGCC | 6 cut(s) | 164, 183, 224, 248, 546, 1059 |
| BspCNI | CTCAG | 1 cut(s) | 1039 |
| BspLI | GGNNCC | 6 cut(s) | 37, 146, 856, 857, 1039, 1426 |
| BspMAI | CTGCAG | 1 cut(s) | 1096 |
| BspOI | GCTAGC | 1 cut(s) | 789 |
| BspPI | GGATC | 5 cut(s) | 30, 43, 713, 890, 1394 |
| BspT107I | GGYRCC | 1 cut(s) | 1424 |
| BspTNI | GGTCTC | 1 cut(s) | 35 |
| BsrBI | CCGCTC | 1 cut(s) | 158 |
| BsrDI | GCAATG | 2 cut(s) | 343, 574 |
| BsrFI | RCCGGY | 1 cut(s) | 230 |
| BssAI | RCCGGY | 1 cut(s) | 230 |
| BssECI | CCNNGG | 5 cut(s) | 192, 309, 538, 858, 924 |
| BssMI | GATC | 8 cut(s) | 22, 35, 50, 495, 646, 718, 895, 1399 |
| BssNI | GRCGYC | 1 cut(s) | 170 |
| BssT1I | CCWWGG | 2 cut(s) | 192, 309 |
| Bst2UI | CCWGG | 2 cut(s) | 118, 1404 |
| Bst4CI | ACNGT | 2 cut(s) | 812, 1446 |
| BstACI | GRCGYC | 1 cut(s) | 170 |
| BstC8I | GCNNGC | 3 cut(s) | 156, 787, 1329 |
| BstDEI | CTNAG | 3 cut(s) | 618, 864, 1047 |
| BstDSI | CCRYGG | 2 cut(s) | 192, 309 |
| BstF5I | GGATG | 2 cut(s) | 104, 920 |
| BstKTI | GATC | 8 cut(s) | 25, 38, 53, 498, 649, 721, 898, 1402 |
| BstMAI | GTCTC | 1 cut(s) | 35 |
| BstMBI | GATC | 8 cut(s) | 22, 35, 50, 495, 646, 718, 895, 1399 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 362, 543, 773, 782, 935, 944, 1094 |
| BstNI | CCWGG | 2 cut(s) | 118, 1404 |
| BstNSI | RCATGY | 1 cut(s) | 910 |
| BstSCI | CCNGG | 3 cut(s) | 116, 858, 1402 |
| BstSFI | CTRYAG | 2 cut(s) | 1092, 1167 |
| BstSLI | GKGCMC | 1 cut(s) | 1333 |
| BstV1I | GCAGC | 6 cut(s) | 112, 133, 345, 705, 1106, 1199 |
| BstX2I | RGATCY | 1 cut(s) | 35 |
| BstYI | RGATCY | 1 cut(s) | 35 |
| BsuI | GTATCC | 1 cut(s) | 1146 |
| BsuRI | GGCC | 6 cut(s) | 164, 183, 224, 248, 546, 1059 |
| BtgI | CCRYGG | 2 cut(s) | 192, 309 |
| BtsCI | GGATG | 2 cut(s) | 104, 920 |
| BtsI | GCAGTG | 3 cut(s) | 551, 898, 957 |
| BtsIMutI | CAGTG | 3 cut(s) | 551, 898, 957 |
| Cac8I | GCNNGC | 3 cut(s) | 156, 787, 1329 |
| Cfr10I | RCCGGY | 1 cut(s) | 230 |
| Cfr13I | GGNCC | 7 cut(s) | 144, 163, 182, 222, 545, 855, 1057 |
| CseI | GACGC | 1 cut(s) | 178 |
| Csp6I | GTAC | 5 cut(s) | 756, 971, 1255, 1322, 1357 |
| CspCI | CAANNNNNGTGG | 4 cut(s) | 238, 273, 556, 591 |
| CviAII | CATG | 5 cut(s) | 141, 193, 310, 907, 1233 |
| CviQI | GTAC | 5 cut(s) | 756, 971, 1255, 1322, 1357 |
| DdeI | CTNAG | 3 cut(s) | 618, 864, 1047 |
| DpnI | GATC | 8 cut(s) | 24, 37, 52, 497, 648, 720, 897, 1401 |
| DpnII | GATC | 8 cut(s) | 22, 35, 50, 495, 646, 718, 895, 1399 |
| DraI | TTTAAA | 1 cut(s) | 348 |
| DraIII | CACNNNGTG | 1 cut(s) | 429 |
| DriI | GACNNNNNGTC | 1 cut(s) | 1216 |
| EaeI | YGGCCR | 1 cut(s) | 246 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 1216 |
| Ecl136II | GAGCTC | 1 cut(s) | 378 |
| Eco130I | CCWWGG | 2 cut(s) | 192, 309 |
| Eco24I | GRGCYC | 1 cut(s) | 380 |
| Eco31I | GGTCTC | 1 cut(s) | 35 |
| Eco32I | GATATC | 1 cut(s) | 205 |
| Eco47I | GGWCC | 2 cut(s) | 144, 855 |
| Eco53kI | GAGCTC | 1 cut(s) | 378 |
| Eco57I | CTGAAG | 1 cut(s) | 1412 |
| EcoICRI | GAGCTC | 1 cut(s) | 378 |
| EcoO109I | RGGNCCY | 2 cut(s) | 855, 1057 |
| EcoRI | GAATTC | 1 cut(s) | 4 |
| EcoRII | CCWGG | 2 cut(s) | 116, 1402 |
| EcoRV | GATATC | 1 cut(s) | 205 |
| EcoT14I | CCWWGG | 2 cut(s) | 192, 309 |
| EcoT38I | GRGCYC | 1 cut(s) | 380 |
| ErhI | CCWWGG | 2 cut(s) | 192, 309 |
| FaeI | CATG | 5 cut(s) | 144, 196, 313, 910, 1236 |
| FaqI | GGGAC | 2 cut(s) | 868, 1015 |
| FatI | CATG | 5 cut(s) | 140, 192, 309, 906, 1232 |
| FauI | CCCGC | 3 cut(s) | 105, 121, 163 |
| FblI | GTMKAC | 1 cut(s) | 884 |
| Fnu4HI | GCNGC | 9 cut(s) | 101, 122, 334, 694, 768, 790, 948, 1095, 1188 |
| FokI | GGATG | 2 cut(s) | 91, 907 |
| FriOI | GRGCYC | 1 cut(s) | 380 |
| Fsp4HI | GCNGC | 9 cut(s) | 101, 122, 334, 694, 768, 790, 948, 1095, 1188 |
| FspBI | CTAG | 4 cut(s) | 471, 786, 888, 1456 |
| GluI | GCNGC | 9 cut(s) | 101, 122, 334, 694, 768, 790, 948, 1095, 1188 |
| GsaI | CCCAGC | 1 cut(s) | 1080 |
| GsuI | CTGGAG | 1 cut(s) | 1056 |
| HaeIII | GGCC | 6 cut(s) | 164, 183, 224, 248, 546, 1059 |
| HapII | CCGG | 5 cut(s) | 161, 231, 362, 782, 860 |
| HgaI | GACGC | 1 cut(s) | 178 |
| Hin1I | GRCGYC | 1 cut(s) | 170 |
| Hin1II | CATG | 5 cut(s) | 144, 196, 313, 910, 1236 |
| HincII | GTYRAC | 1 cut(s) | 268 |
| HindII | GTYRAC | 1 cut(s) | 268 |
| HinfI | GANTC | 4 cut(s) | 404, 529, 827, 871 |
| HpaII | CCGG | 5 cut(s) | 161, 231, 362, 782, 860 |
| HphI | GGTGA | 2 cut(s) | 857, 1424 |
| Hpy166II | GTNNAC | 3 cut(s) | 268, 885, 1331 |
| Hpy188I | TCNGA | 9 cut(s) | 35, 200, 255, 534, 542, 738, 826, 1210, 1392 |
| Hpy188III | TCNNGA | 4 cut(s) | 451, 984, 1139, 1178 |
| Hpy8I | GTNNAC | 3 cut(s) | 268, 885, 1331 |
| HpyAV | CCTTC | 2 cut(s) | 94, 1070 |
| HpyCH4III | ACNGT | 2 cut(s) | 812, 1446 |
| HpyCH4IV | ACGT | 2 cut(s) | 1212, 1308 |
| HpyCH4V | TGCA | 8 cut(s) | 356, 653, 776, 1094, 1278, 1304, 1331, 1418 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 362, 543, 773, 782, 935, 944, 1094 |
| HpyF3I | CTNAG | 3 cut(s) | 618, 864, 1047 |
| HpySE526I | ACGT | 2 cut(s) | 1212, 1308 |
| Hsp92I | GRCGYC | 1 cut(s) | 170 |
| Hsp92II | CATG | 5 cut(s) | 144, 196, 313, 910, 1236 |
| KflI | GGGWCCC | 1 cut(s) | 855 |
| Kzo9I | GATC | 8 cut(s) | 22, 35, 50, 495, 646, 718, 895, 1399 |
| LmnI | GCTCC | 2 cut(s) | 163, 748 |
| Lsp1109I | GCAGC | 6 cut(s) | 112, 133, 345, 705, 1106, 1199 |
| LweI | GCATC | 4 cut(s) | 662, 779, 1132, 1291 |
| MaeI | CTAG | 4 cut(s) | 471, 786, 888, 1456 |
| MaeII | ACGT | 2 cut(s) | 1212, 1308 |
| MaeIII | GTNAC | 4 cut(s) | 549, 806, 1235, 1406 |
| MalI | GATC | 8 cut(s) | 24, 37, 52, 497, 648, 720, 897, 1401 |
| MbiI | CCGCTC | 1 cut(s) | 158 |
| MboI | GATC | 8 cut(s) | 22, 35, 50, 495, 646, 718, 895, 1399 |
| MboII | GAAGA | 3 cut(s) | 199, 1385, 1405 |
| MflI | RGATCY | 1 cut(s) | 35 |
| MhlI | GDGCHC | 2 cut(s) | 380, 1333 |
| MluCI | AATT | 5 cut(s) | 4, 437, 609, 987, 1117 |
| MlyI | GAGTC | 1 cut(s) | 538 |
| MmeI | TCCRAC | 5 cut(s) | 33, 63, 178, 804, 946 |
| MroXI | GAANNNNTTC | 1 cut(s) | 613 |
| MseI | TTAA | 5 cut(s) | 324, 347, 510, 675, 1149 |
| MspA1I | CMGCKG | 2 cut(s) | 1076, 1190 |
| MspI | CCGG | 5 cut(s) | 161, 231, 362, 782, 860 |
| MspR9I | CCNGG | 3 cut(s) | 118, 860, 1404 |
| Mva1269I | GAATGC | 2 cut(s) | 358, 745 |
| MvaI | CCWGG | 2 cut(s) | 118, 1404 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 362, 543, 773, 782, 935, 944, 1094 |
| NciI | CCSGG | 1 cut(s) | 860 |
| NcoI | CCATGG | 2 cut(s) | 192, 309 |
| NdeII | GATC | 8 cut(s) | 22, 35, 50, 495, 646, 718, 895, 1399 |
| NheI | GCTAGC | 1 cut(s) | 785 |
| NlaIII | CATG | 5 cut(s) | 144, 196, 313, 910, 1236 |
| NlaIV | GGNNCC | 6 cut(s) | 37, 146, 856, 857, 1039, 1426 |
| NmeAIII | GCCGAG | 1 cut(s) | 905 |
| NmuCI | GTSAC | 1 cut(s) | 549 |
| NspI | RCATGY | 1 cut(s) | 910 |
| PciI | ACATGT | 1 cut(s) | 906 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 251 |
| PctI | GAATGC | 2 cut(s) | 358, 745 |
| PdmI | GAANNNNTTC | 1 cut(s) | 613 |
| PfeI | GAWTC | 3 cut(s) | 404, 827, 871 |
| PflMI | CCANNNNNTGG | 3 cut(s) | 141, 429, 668 |
| PkrI | GCNGC | 9 cut(s) | 102, 123, 335, 695, 769, 791, 949, 1096, 1189 |
| PleI | GAGTC | 1 cut(s) | 537 |
| PpsI | GAGTC | 1 cut(s) | 537 |
| PpuMI | RGGWCCY | 1 cut(s) | 855 |
| PscI | ACATGT | 1 cut(s) | 906 |
| Psp124BI | GAGCTC | 1 cut(s) | 380 |
| Psp5II | RGGWCCY | 1 cut(s) | 855 |
| Psp6I | CCWGG | 2 cut(s) | 116, 1402 |
| PspFI | CCCAGC | 1 cut(s) | 1076 |
| PspGI | CCWGG | 2 cut(s) | 116, 1402 |
| PspN4I | GGNNCC | 6 cut(s) | 37, 146, 856, 857, 1039, 1426 |
| PspPI | GGNCC | 7 cut(s) | 144, 163, 182, 222, 545, 855, 1057 |
| PspPPI | RGGWCCY | 1 cut(s) | 855 |
| PstI | CTGCAG | 1 cut(s) | 1096 |
| PsuI | RGATCY | 1 cut(s) | 35 |
| PvuII | CAGCTG | 2 cut(s) | 1076, 1190 |
| RsaI | GTAC | 5 cut(s) | 757, 972, 1256, 1323, 1358 |
| RsaNI | GTAC | 5 cut(s) | 756, 971, 1255, 1322, 1357 |
| SacI | GAGCTC | 1 cut(s) | 380 |
| SaqAI | TTAA | 5 cut(s) | 324, 347, 510, 675, 1149 |
| SatI | GCNGC | 9 cut(s) | 101, 122, 334, 694, 768, 790, 948, 1095, 1188 |
| Sau3AI | GATC | 8 cut(s) | 22, 35, 50, 495, 646, 718, 895, 1399 |
| Sau96I | GGNCC | 7 cut(s) | 144, 163, 182, 222, 545, 855, 1057 |
| SchI | GAGTC | 1 cut(s) | 538 |
| ScrFI | CCNGG | 3 cut(s) | 118, 860, 1404 |
| SduI | GDGCHC | 2 cut(s) | 380, 1333 |
| SfaNI | GCATC | 4 cut(s) | 662, 779, 1132, 1291 |
| SfcI | CTRYAG | 2 cut(s) | 1092, 1167 |
| SinI | GGWCC | 2 cut(s) | 144, 855 |
| SmlI | CTYRAG | 2 cut(s) | 1052, 1178 |
| SmoI | CTYRAG | 2 cut(s) | 1052, 1178 |
| Sse9I | AATT | 5 cut(s) | 4, 437, 609, 987, 1117 |
| SspMI | CTAG | 4 cut(s) | 471, 786, 888, 1456 |
| SstI | GAGCTC | 1 cut(s) | 380 |
| StyD4I | CCNGG | 3 cut(s) | 116, 858, 1402 |
| StyI | CCWWGG | 2 cut(s) | 192, 309 |
| TaaI | ACNGT | 2 cut(s) | 812, 1446 |
| TaiI | ACGT | 2 cut(s) | 1215, 1311 |
| TaqI | TCGA | 5 cut(s) | 15, 21, 386, 656, 1220 |
| TasI | AATT | 5 cut(s) | 4, 437, 609, 987, 1117 |
| TatI | WGTACW | 3 cut(s) | 970, 1254, 1356 |
| TauI | GCSGC | 3 cut(s) | 770, 792, 950 |
| TfiI | GAWTC | 3 cut(s) | 404, 827, 871 |
| Tru1I | TTAA | 5 cut(s) | 324, 347, 510, 675, 1149 |
| Tru9I | TTAA | 5 cut(s) | 324, 347, 510, 675, 1149 |
| TscAI | CASTG | 3 cut(s) | 558, 898, 957 |
| TseFI | GTSAC | 1 cut(s) | 549 |
| TseI | GCWGC | 6 cut(s) | 100, 121, 333, 693, 1094, 1187 |
| Tsp45I | GTSAC | 1 cut(s) | 549 |
| TspDTI | ATGAA | 4 cut(s) | 17, 819, 1221, 1356 |
| TspGWI | ACGGA | 1 cut(s) | 1019 |
| TspRI | CASTG | 3 cut(s) | 558, 898, 957 |
| Van91I | CCANNNNNTGG | 3 cut(s) | 141, 429, 668 |
| VneI | GTGCAC | 1 cut(s) | 1329 |
| VpaK11BI | GGWCC | 2 cut(s) | 144, 855 |
| XapI | RAATTY | 1 cut(s) | 4 |
| XceI | RCATGY | 1 cut(s) | 910 |
| XmiI | GTMKAC | 1 cut(s) | 884 |
| XmnI | GAANNNNTTC | 1 cut(s) | 613 |
| XspI | CTAG | 4 cut(s) | 471, 786, 888, 1456 |