Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb4

Orthogroup ID

OG0008613

Physical Location & Seq

Genomic Coordinates Forward (+)

23774273 .. 23776993

Gene Structure 2721 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_4g20630.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2001 bp

ATGTATCTGAAAGAAGGATGCTCCTTACTGCTGAAAATCCACAAACCCACAAGACCCTTGGTGCTCAGCTCAAACCCAAACCTAGTTCCCAGCTTAAACCCTAAACCCCAAACTGAACCCACCCAACCCATTTTGAAAGAGTCTGAAGTCTTTCAGAGGCTGAAGCATGAGCCCCAGTTGGGTCTGGCATTGGAGTATTTCAGGTCCATTTCCAACTCCAGAGCTTTCAAACACACCCAATTGACATACACGGCCATGATTGAGAAGCTTGGGAGCCAATGTGAAATGGATGGTGTGCAGTACTTGATGCACCAGATGAAACTGGAGGGGGTGAGTTGCTCTGAGGACTTGTTTATAAGTGTGGTAAAGGCTTATAGGAGAGCTGGGTTGGCTGAGCAGGCATTGAAGGTGTTTTATAGGATAAGAGAATTCGGGTGCAAACCGAGTGTGAAGATTTACAATCACTTGTTGGATGCGTTGCTTTGTGAAAATAGGTTTCGGATGATTAATCCGGTGTATGTTAATATGAAGAAAGATGGGATGGTGCCGAATGTGTTTACTTATAATATTTTGTTGAAGGCATTGTGTAAGAATGATAGGGTGGATGGTGCACATAAGTTGCTTGTTGAAATGTCTAAGAAGGGATGTTGTCCTGACACGGTGAGCTATACGACTGTAGTGTCTGCATTGTGTAGGCTTGGGAAGGTAGACGAAGCGAGGGAGCTTGCTTGTAAGTTTGAGCCTAATGTGGCTGTTTATAATGCTTTGGTTAATGGATTGTGCAAAGAGTTCAAGTTTGAAGAGGCGTTGGTGTTGCTGGTTGAAATGGCTGATAAGGGATTAGACCCTAATGTCATTACATACTCGACGGTTATTAGTTCTCTTTCTGATATGAGGAATGTTGAGTCTGCTCTTGCAGTTTTGGCTAAGATGTTTGTGAGGGGATGTAGGCCTAACATTCACACCTTTACTTCCTTGATAAAGGGTTATTTTATGGAAGGTAGAGTTAGTGAAGCTCTGGACTTGTGGAACCGCATGGTGTGTGAGGGATTTGAGCCAAATGTTGTTGCATATACTACTGTTATACATGGTCTCTGCTCTGTTGGGAATATGCGCAAAGCTATATCTGTTTTACATGAGATGCAGAAAAAGGGTTGTTCTCCAAATGTAACCACATATAGCACTCTTATTGATGGGTTTGCAAAAGCTGGCAACCTTGTTCGGGCATCTGAGACTTGGAACAATATGATGGACTGTGGTTGCCGTCCTAATGTAATAGCATATACCTGTATGGTGGATGTTCTGTGCAGGAAATATATGTTTAATCAAGCTCAATGTCTTTTAGAAAATATGACTGCAGAAGGCTGTCCTCCAAATATAGTTACTTTTAACACATTTATTAAAGGGTTATGTGAAGGTGGAGAAGTAGATTGGGCTGTCAAGGTGCTCAACAAGATGAGGGACAATGGGAGTTTGCCTAACATTACAACATATAATGAGTTATTGTATGGTCTCTTCAAGGTGAACAAATTCAAAGAAGCATTTGGACTTGTCAGGGAGATACATGATAAGGGATTGAAATTGAATTTGGTAACATACAACACCATTTTAAATGGTTTTTGTCGTGCTGGGATGACCAACGAGACTATGCAGGTTTTTGGCGACATGCTGAAATGTGGAACAAAGCCTGATACCATTACATATAACATACTGATATATTTCTTTTGCAAGCAAGGGAGGATAGAGAGTGCTATTCAGCTTTTCAACAGTACTGGTGCAGCAAAGGAGTGGTGCCCAGATGTAATAACTTATACTAGTCTTCTATGGGGAATTTGTAGCTCAATAGGTCTAGACGAGGCCATGGTTTATCTTCATAAGATGATAAGTGAAGGTATCTGCCCCAACTTTGGCACATGGAATGTATTGGTGCAGTGTTTCTTTAGCAGCTTAGGTCATTTGGGGCCAATCTACATACTGGATGAAATTCTTCATGATGGATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_1 PPR_2 PPR_3 PPR_long

Protein Analysis

667

Amino Acids

74.82

Weight (kDa)

8.21

Isoelectric Point (pI)

26.68

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_3	PF13812	102 - 159	7e-06	Pentatricopeptide repeat domain
PPR_2	PF13041	148 - 197	3.5e-13	PPR repeat family
PPR_3	PF13812	150 - 197	4.8e-07	Pentatricopeptide repeat domain
PPR_1	PF12854	179 - 212	1.4e-11	PPR repeat
PPR_2	PF13041	183 - 232	8.3e-18	PPR repeat family
PPR	PF01535	186 - 216	3.1e-07	PPR repeat
PPR_1	PF12854	214 - 242	3.5e-10	PPR repeat
PPR_long	PF17177	244 - 330	1.4e-06	Pentacotripeptide-repeat region of PRORP
PPR_1	PF12854	246 - 276	2.6e-07	PPR repeat
PPR_2	PF13041	248 - 296	3.4e-14	PPR repeat family
PPR_3	PF13812	272 - 330	6.2e-10	Pentatricopeptide repeat domain
PPR_2	PF13041	284 - 330	2.1e-11	PPR repeat family
PPR_1	PF12854	314 - 347	3.2e-09	PPR repeat
PPR_2	PF13041	321 - 366	1.2e-14	PPR repeat family
PPR	PF01535	322 - 351	7.2e-07	PPR repeat
PPR_long	PF17177	336 - 416	3.9e-06	Pentacotripeptide-repeat region of PRORP
PPR_3	PF13812	344 - 398	6e-14	Pentatricopeptide repeat domain
PPR_1	PF12854	350 - 382	1.2e-10	PPR repeat
PPR_2	PF13041	353 - 402	1.4e-20	PPR repeat family
PPR	PF01535	356 - 386	2.9e-08	PPR repeat
PPR_1	PF12854	384 - 416	6.6e-10	PPR repeat
PPR_3	PF13812	389 - 434	2.4e-06	Pentatricopeptide repeat domain
PPR_2	PF13041	395 - 437	4.4e-09	PPR repeat family
PPR_2	PF13041	423 - 471	1e-13	PPR repeat family
PPR_3	PF13812	447 - 502	4.9e-09	Pentatricopeptide repeat domain
PPR_1	PF12854	455 - 487	3.8e-13	PPR repeat
PPR_2	PF13041	458 - 507	7.6e-13	PPR repeat family
PPR	PF01535	461 - 490	7.8e-06	PPR repeat
TPR_24	PF23276	463 - 555	7.4e-06	Fungal tetratrico peptide repeats
PPR_2	PF13041	493 - 542	4.1e-13	PPR repeat family
PPR_3	PF13812	517 - 575	1.3e-11	Pentatricopeptide repeat domain
PPR_1	PF12854	524 - 556	3e-11	PPR repeat
PPR_2	PF13041	529 - 577	9.6e-16	PPR repeat family
PPR	PF01535	531 - 560	6.8e-07	PPR repeat
PPR_1	PF12854	560 - 589	6.4e-10	PPR repeat
PPR_2	PF13041	563 - 589	1.8e-06	PPR repeat family
PPR_2	PF13041	599 - 646	1.3e-06	PPR repeat family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Orthologous Genes (Group: OG0008613)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G48810
fragaria_vesca	FvH4_4g20630
malus_domestica	MD13G1149200.v1.1
prunus_persica	Prupe.1G113200_v2.0.a1
pyrus_communis	pycom13g12840
rosa_chinensis	RchiOBHm_Chr4g0425991 RchiOBHm_Chr4g0426031
rosa_laevigata	RLG00000007323 RLG00000007325
rosa_multiflora	Rmu_ssc0000281.1_g000016 Rmu_ssc0000281.1_g000018 Rmu_ssc0000281.1_g000020
rosa_roxburghii	Rroxscaffold_5G00368000
rosa_rugosa	Rorug04G0207900 Rorug04G0208100
rosa_samantha	Rh4AG264900 Rh4BG270800 Rh4BG271100 Rh4CG283400 Rh4CG283700 Rh4CG283900 Rh4DG267400
rosa_wichuraiana	Rw4G022880

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	3 cut(s)	356, 564, 759
AasI	GACNNNNNNGTC	2 cut(s)	679, 851
Acc16I	TGCGCA	1 cut(s)	1115
Acc36I	ACCTGC	1 cut(s)	1642
AccB1I	GGYRCC	2 cut(s)	544, 1791
AccI	GTMKAC	1 cut(s)	708
AciI	CCGC	1 cut(s)	1033
AcoI	YGGCCR	1 cut(s)	252
AcsI	RAATTY	5 cut(s)	428, 1529, 1585, 1830, 1983
AcuI	CTGAAG	2 cut(s)	165, 182
AfaI	GTAC	2 cut(s)	302, 1771
AfiI	CCNNNNNNNGG	3 cut(s)	179, 1222, 1907
AhlI	ACTAGT	1 cut(s)	1814
AjuI	GAANNNNNNNTTGG	2 cut(s)	1571, 1603
Alw21I	GWGCWC	3 cut(s)	66, 613, 1449
Alw26I	GTCTC	4 cut(s)	1097, 1226, 1517, 1637
Alw44I	GTGCAC	1 cut(s)	609
AlwNI	CAGNNNCTG	1 cut(s)	160
AoxI	GGCC	4 cut(s)	252, 950, 1857, 1961
ApaLI	GTGCAC	1 cut(s)	609
ApeKI	GCWGC	2 cut(s)	1778, 1944
ApoI	RAATTY	5 cut(s)	428, 1529, 1585, 1830, 1983
AseI	ATTAAT	1 cut(s)	507
Asp700I	GAANNNNTTC	3 cut(s)	150, 1529, 1986
AspLEI	GCGC	1 cut(s)	1116
AspS9I	GGNCC	2 cut(s)	204, 1961
AsuHPI	GGTGA	3 cut(s)	343, 673, 1534
AvaII	GGWCC	1 cut(s)	204
BaeGI	GKGCMC	2 cut(s)	613, 1796
BanI	GGYRCC	2 cut(s)	544, 1791
BanII	GRGCYC	1 cut(s)	174
BarI	GAAGNNNNNNTAC	2 cut(s)	1499, 1531
BbsI	GAAGAC	1 cut(s)	1811
Bbv12I	GWGCWC	3 cut(s)	66, 613, 1449
BbvI	GCAGC	2 cut(s)	1790, 1956
BccI	CCATC	7 cut(s)	284, 530, 535, 599, 1187, 1243, 1988
BceAI	ACGGC	2 cut(s)	267, 1248
BcoDI	GTCTC	4 cut(s)	1097, 1226, 1517, 1637
BcuI	ACTAGT	1 cut(s)	1814
BfaI	CTAG	3 cut(s)	83, 1815, 1850
BfmI	CTRYAG	2 cut(s)	675, 1356
BfuAI	ACCTGC	1 cut(s)	1642
BisI	GCNGC	2 cut(s)	1779, 1945
BlpI	GCTNAGC	2 cut(s)	65, 393
BlsI	GCNGC	2 cut(s)	1780, 1946
BmcAI	AGTACT	2 cut(s)	302, 1771
Bme18I	GGWCC	1 cut(s)	204
BmgT120I	GGNCC	2 cut(s)	204, 1961
BmiI	GGNNCC	5 cut(s)	275, 546, 1031, 1793, 1962
BmrI	ACTGGG	1 cut(s)	169
BmsI	GCATC	5 cut(s)	8, 297, 463, 1131, 1235
BmuI	ACTGGG	1 cut(s)	169
BpiI	GAAGAC	1 cut(s)	1811
BpmI	CTGGAG	2 cut(s)	202, 344
Bpu10I	CCTNAGC	1 cut(s)	1948
Bpu1102I	GCTNAGC	2 cut(s)	65, 393
BsaI	GGTCTC	2 cut(s)	1097, 1517
BsaJI	CCNNGG	2 cut(s)	57, 1860
BsaWI	WCCGGW	1 cut(s)	511
BsaXI	ACNNNNNCTCC	2 cut(s)	265, 295
Bsc4I	CCNNNNNNNGG	3 cut(s)	179, 1222, 1907
Bse1I	ACTGG	4 cut(s)	175, 327, 1777, 1980
BseDI	CCNNGG	2 cut(s)	57, 1860
BseLI	CCNNNNNNNGG	3 cut(s)	179, 1222, 1907
BseMII	CTCAG	4 cut(s)	79, 333, 384, 1221
BseNI	ACTGG	4 cut(s)	175, 327, 1777, 1980
BseSI	GKGCMC	2 cut(s)	613, 1796
BseXI	GCAGC	2 cut(s)	1790, 1956
BseYI	CCCAGC	3 cut(s)	89, 383, 1628
BsgI	GTGCAG	4 cut(s)	317, 1327, 1797, 1949
BshFI	GGCC	4 cut(s)	254, 952, 1859, 1963
BshNI	GGYRCC	2 cut(s)	544, 1791
BsiHKAI	GWGCWC	3 cut(s)	66, 613, 1449
BsiSI	CCGG	1 cut(s)	512
BslFI	GGGAC	1 cut(s)	1475
BslI	CCNNNNNNNGG	3 cut(s)	179, 1222, 1907
BsmAI	GTCTC	4 cut(s)	1097, 1226, 1517, 1637
BsmFI	GGGAC	1 cut(s)	1475
BsnI	GGCC	4 cut(s)	254, 952, 1859, 1963
Bso31I	GGTCTC	2 cut(s)	1097, 1517
Bsp1286I	GDGCHC	5 cut(s)	66, 174, 613, 1449, 1796
Bsp1720I	GCTNAGC	2 cut(s)	65, 393
Bsp19I	CCATGG	1 cut(s)	1860
BspACI	CCGC	1 cut(s)	1033
BspANI	GGCC	4 cut(s)	254, 952, 1859, 1963
BspCNI	CTCAG	4 cut(s)	78, 334, 385, 1222
BspHI	TCATGA	1 cut(s)	1990
BspLI	GGNNCC	5 cut(s)	275, 546, 1031, 1793, 1962
BspMAI	CTGCAG	1 cut(s)	1360
BspMI	ACCTGC	1 cut(s)	1642
BspT107I	GGYRCC	2 cut(s)	544, 1791
BspTNI	GGTCTC	2 cut(s)	1097, 1517
BsrI	ACTGG	4 cut(s)	175, 327, 1777, 1980
BssECI	CCNNGG	2 cut(s)	57, 1860
BssT1I	CCWWGG	2 cut(s)	57, 1860
Bst4CI	ACNGT	6 cut(s)	661, 676, 871, 1081, 1256, 1769
Bst6I	CTCTTC	2 cut(s)	795, 1520
BstC8I	GCNNGC	4 cut(s)	399, 726, 1210, 1730
BstDEI	CTNAG	7 cut(s)	65, 342, 393, 636, 927, 1230, 1948
BstDSI	CCRYGG	1 cut(s)	1860
BstHHI	GCGC	1 cut(s)	1116
BstMAI	GTCTC	4 cut(s)	1097, 1226, 1517, 1637
BstMWI	GCNNNNNNNGC	3 cut(s)	389, 398, 923
BstNSI	RCATGY	1 cut(s)	1669
BstSFI	CTRYAG	2 cut(s)	675, 1356
BstSLI	GKGCMC	2 cut(s)	613, 1796
BstV1I	GCAGC	2 cut(s)	1790, 1956
BstV2I	GAAGAC	1 cut(s)	1811
BsuRI	GGCC	4 cut(s)	254, 952, 1859, 1963
BtgI	CCRYGG	1 cut(s)	1860
BtsI	GCAGTG	1 cut(s)	1937
BtsIMutI	CAGTG	1 cut(s)	1937
BveI	ACCTGC	1 cut(s)	1642
Cac8I	GCNNGC	4 cut(s)	399, 726, 1210, 1730
CaiI	CAGNNNCTG	1 cut(s)	160
CciI	TCATGA	1 cut(s)	1990
CfoI	GCGC	1 cut(s)	1116
Cfr13I	GGNCC	2 cut(s)	204, 1961
Csp6I	GTAC	2 cut(s)	301, 1770
CviQI	GTAC	2 cut(s)	301, 1770
DdeI	CTNAG	7 cut(s)	65, 342, 393, 636, 927, 1230, 1948
DraI	TTTAAA	1 cut(s)	1611
DrdI	GACNNNNNNGTC	2 cut(s)	679, 851
DseDI	GACNNNNNNGTC	2 cut(s)	679, 851
EaeI	YGGCCR	1 cut(s)	252
Eam1104I	CTCTTC	2 cut(s)	795, 1520
EarI	CTCTTC	2 cut(s)	795, 1520
Eco130I	CCWWGG	2 cut(s)	57, 1860
Eco147I	AGGCCT	1 cut(s)	952
Eco24I	GRGCYC	1 cut(s)	174
Eco31I	GGTCTC	2 cut(s)	1097, 1517
Eco47I	GGWCC	1 cut(s)	204
Eco57I	CTGAAG	2 cut(s)	165, 182
EcoRI	GAATTC	1 cut(s)	428
EcoT14I	CCWWGG	2 cut(s)	57, 1860
EcoT38I	GRGCYC	1 cut(s)	174
ErhI	CCWWGG	2 cut(s)	57, 1860
FaqI	GGGAC	1 cut(s)	1475
FblI	GTMKAC	1 cut(s)	708
Fnu4HI	GCNGC	2 cut(s)	1779, 1945
FriOI	GRGCYC	1 cut(s)	174
Fsp4HI	GCNGC	2 cut(s)	1779, 1945
FspBI	CTAG	3 cut(s)	83, 1815, 1850
FspI	TGCGCA	1 cut(s)	1115
GlaI	GCGC	1 cut(s)	1115
GluI	GCNGC	2 cut(s)	1779, 1945
GsaI	CCCAGC	3 cut(s)	93, 387, 1632
GsuI	CTGGAG	2 cut(s)	202, 344
HaeIII	GGCC	4 cut(s)	254, 952, 1859, 1963
HapII	CCGG	1 cut(s)	512
HhaI	GCGC	1 cut(s)	1116
Hin6I	GCGC	1 cut(s)	1114
HinP1I	GCGC	1 cut(s)	1114
HindIII	AAGCTT	1 cut(s)	266
HinfI	GANTC	2 cut(s)	140, 905
HpaII	CCGG	1 cut(s)	512
HphI	GGTGA	3 cut(s)	343, 673, 1534
Hpy166II	GTNNAC	4 cut(s)	558, 611, 709, 1525
Hpy188I	TCNGA	7 cut(s)	9, 145, 156, 343, 501, 889, 1231
Hpy188III	TCNNGA	5 cut(s)	219, 653, 1019, 1850, 1991
Hpy8I	GTNNAC	4 cut(s)	558, 611, 709, 1525
Hpy99I	CGWCG	1 cut(s)	871
HpyAV	CCTTC	9 cut(s)	8, 400, 571, 634, 697, 992, 1355, 1409, 1883
HpyCH4III	ACNGT	6 cut(s)	661, 676, 871, 1081, 1256, 1769
HpyF10VI	GCNNNNNNNGC	3 cut(s)	389, 398, 923
HpyF3I	CTNAG	7 cut(s)	65, 342, 393, 636, 927, 1230, 1948
HspAI	GCGC	1 cut(s)	1114
LmnI	GCTCC	3 cut(s)	26, 273, 721
Lsp1109I	GCAGC	2 cut(s)	1790, 1956
LweI	GCATC	5 cut(s)	8, 297, 463, 1131, 1235
MaeI	CTAG	3 cut(s)	83, 1815, 1850
MaeIII	GTNAC	3 cut(s)	1168, 1381, 1591
MboII	GAAGA	7 cut(s)	463, 541, 812, 1507, 1811, 1862, 1979
MfeI	CAATTG	1 cut(s)	239
MhlI	GDGCHC	5 cut(s)	66, 174, 613, 1449, 1796
MluCI	AATT	7 cut(s)	239, 428, 1529, 1580, 1585, 1830, 1983
MlyI	GAGTC	2 cut(s)	149, 914
MmeI	TCCRAC	2 cut(s)	237, 450
MroXI	GAANNNNTTC	3 cut(s)	150, 1529, 1986
MseI	TTAA	8 cut(s)	95, 507, 522, 771, 1323, 1389, 1401, 1610
MslI	CAYNNNNRTG	1 cut(s)	254
MspI	CCGG	1 cut(s)	512
MunI	CAATTG	1 cut(s)	239
MwoI	GCNNNNNNNGC	3 cut(s)	389, 398, 923
NcoI	CCATGG	1 cut(s)	1860
NlaIV	GGNNCC	5 cut(s)	275, 546, 1031, 1793, 1962
NsbI	TGCGCA	1 cut(s)	1115
NspI	RCATGY	1 cut(s)	1669
PagI	TCATGA	1 cut(s)	1990
PceI	AGGCCT	1 cut(s)	952
PdmI	GAANNNNTTC	3 cut(s)	150, 1529, 1986
PkrI	GCNGC	2 cut(s)	1780, 1946
PleI	GAGTC	2 cut(s)	148, 913
PpsI	GAGTC	2 cut(s)	148, 913
PshBI	ATTAAT	1 cut(s)	507
PsiI	TTATAA	3 cut(s)	356, 564, 759
PspFI	CCCAGC	3 cut(s)	89, 383, 1628
PspN4I	GGNNCC	5 cut(s)	275, 546, 1031, 1793, 1962
PspPI	GGNCC	2 cut(s)	204, 1961
PstI	CTGCAG	1 cut(s)	1360
PstNI	CAGNNNCTG	1 cut(s)	160
RsaI	GTAC	2 cut(s)	302, 1771
RsaNI	GTAC	2 cut(s)	301, 1770
RseI	CAYNNNNRTG	1 cut(s)	254
SaqAI	TTAA	8 cut(s)	95, 507, 522, 771, 1323, 1389, 1401, 1610
SatI	GCNGC	2 cut(s)	1779, 1945
Sau96I	GGNCC	2 cut(s)	204, 1961
ScaI	AGTACT	2 cut(s)	302, 1771
SchI	GAGTC	2 cut(s)	149, 914
SduI	GDGCHC	5 cut(s)	66, 174, 613, 1449, 1796
SfaNI	GCATC	5 cut(s)	8, 297, 463, 1131, 1235
SfcI	CTRYAG	2 cut(s)	675, 1356
SinI	GGWCC	1 cut(s)	204
SmiMI	CAYNNNNRTG	1 cut(s)	254
SpeI	ACTAGT	1 cut(s)	1814
Sse9I	AATT	7 cut(s)	239, 428, 1529, 1580, 1585, 1830, 1983
SseBI	AGGCCT	1 cut(s)	952
SsiI	CCGC	1 cut(s)	1033
SspI	AATATT	1 cut(s)	568
SspMI	CTAG	3 cut(s)	83, 1815, 1850
StuI	AGGCCT	1 cut(s)	952
StyI	CCWWGG	2 cut(s)	57, 1860
TaaI	ACNGT	6 cut(s)	661, 676, 871, 1081, 1256, 1769
TaqI	TCGA	1 cut(s)	866
TasI	AATT	7 cut(s)	239, 428, 1529, 1580, 1585, 1830, 1983
TatI	WGTACW	2 cut(s)	300, 1769
Tru1I	TTAA	8 cut(s)	95, 507, 522, 771, 1323, 1389, 1401, 1610
Tru9I	TTAA	8 cut(s)	95, 507, 522, 771, 1323, 1389, 1401, 1610
TscAI	CASTG	1 cut(s)	1937
TseI	GCWGC	2 cut(s)	1778, 1944
TspDTI	ATGAA	5 cut(s)	332, 542, 1862, 1979, 1995
TspRI	CASTG	1 cut(s)	1937
VneI	GTGCAC	1 cut(s)	609
VpaK11BI	GGWCC	1 cut(s)	204
VspI	ATTAAT	1 cut(s)	507
XapI	RAATTY	5 cut(s)	428, 1529, 1585, 1830, 1983
XbaI	TCTAGA	1 cut(s)	1849
XceI	RCATGY	1 cut(s)	1669
XcmI	CCANNNNNNNNNTGG	1 cut(s)	55
XmiI	GTMKAC	1 cut(s)	708
XmnI	GAANNNNTTC	3 cut(s)	150, 1529, 1986
XspI	CTAG	3 cut(s)	83, 1815, 1850
ZrmI	AGTACT	2 cut(s)	302, 1771

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.