pycom13g12840

Pentatricopeptide repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr13
OG0008613
Physical Location & Seq
Reverse (-)
9042073 .. 9044067
1995 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom13g12840.1

Sequence Viewer

Length: 1995 bp
ATGTATTTGAAGGAAGGACGCTCCTTGCTGCTGAAAGTTCACAAACCATCAGTCCCATTTGTTCTCAATACAACAAACCCAATTCTCCCTAAACCCCAAATCGAACCCAATCAAGATCAACCCTTTCTCAAAGAGTCTGATGTGTTGCAGAGGTTGAAATCCGAGCACCATTTGGGCTCTGCATTAGAGTATTTCAGGTCAATTGCCAATTCCAGAGCTTTTGAGCACACCCCATTGACATACCATGCCATGATTGAGAAGCTTGGGAGGCAATGTGAGATGGATGGTGTGCAGTACTTGTTGAACCAGATGAAATTGGAGGGAGTTGGGTGCTCTGAGGAGCTGTTTATATGTGTGATCAGCTCGTATCGGCGAGCTGGGTTGGCTGAGCAGGCCTTGAAGATGTTCTATAGGATTAGGGAATTTGGGTGCAAATCCACTGTCAAGATTTACAATCACCTCTTGGATGCTCTGCTTAGCGAAAATCGGTTTCAGATGATTAACCCGATATATAGCAATATGAAGAAAGATGGGATGGAGCCAAATGTATATACTTATAACATTCTGTTGAAGGCGTTGTGTAAGAATGATAGGGTTGATGGTGCTCACAAACTGCTTGTTGAAATGTCTAAGAAGGGGTGTCTGCCGGACGCAGTGAGCTATACCACTGTAGTGTCTGCATTATGTAGACTTGGGAAGGTAGAGGAAGCCAGGGAGCTTGCTGGTAGGTTTGAACCCATTGTGCCTGCTTATAATGCTTTGGTGAATGGGGTGTGCAAGGAGAACAAAATTGAGGAGGCTTTGAAGTTGTTGGTTGAAATGGTGGATAAGGGTATAAACCCTAATGTTATCACGTACTCAACGATTATTAATTCACTTTCTGATACGAGGAATGTTGAGTCTGCTCTTGCAGTTTTGGCTCAAATGTTTGTGAGAGGATGTAGCCCTAATGTTCACACCTTTACTTCCTTGATAAAGGGCTATTTTGTGGAAGGGAGAGTACATGAAGCTCTTGACTTGTGGAATCGGATGATTCTCGAGGAATATAAGCCAAATATTATTGCGTACACTACTCTGGTACATGGTCTCTGCACTAATGGAAAAATGGGGGATGCTGTATCGGTTTGCCATGAGATGGACAAAAATGGCTGCCCTCCAAATGTGACCACATATAGCACTCTGATTGATGGCTTTGCCAAAGTTGGTGACCTTGTTGGTGCATCTGAGACTTGGAACCATATGATGAACCGTGGTTGCCGCCCTAATGTTATAGCCTATACATGCATGGTGGATGTTCTCTGTAGGAATTTTATGTTTCATCAAGCTCATAGTCTTGTAGAAAATATGGCTGCTGAAGGTTGTCCTCCGAATACAGTTACATTTAACACGTTTATCAAAGGGTTATGTGCTGATGGAAAGGTAGATTGGGCTGTCAACATGCTCGATAAAATGGAGAAAAATGGGTGTTTGCCTAACATTACAACATATAATGAGTTACTGGACGGTCTCTTCAAGGCGAACAGATTCGAAGAAGCTTATGGAATTGTCAGGGAGATAGAAGAAAGAGGGATGATAATGAATTTGGTAACTTACAATACCATTTTGAATGGTTTTTGTCATGCAGGAATGACCAAGGAGGCTATGCAACTTTTAGGAAAGATGCTGGTAAGGGGAACAAAGCATGATGCGATCACATATAACACGATTATATATGCCAATTGTAAGGAAGGTAAGATAAGCACTGCGATTCAGCTGTTCGACAGAATTGGTGCAGAAAAGGAGTGGCAACCAGATGTAGTAGCTTATACTAGTCTTGTGTGGGGGATTTGTAATTGGGTAGGTTTAGATGAGGCCATGATTTATCTAAATAAGATGGTAAGTGAAGGGATCTGCCCCAACACGGGCACATGGAATGCGTTGGTGCGGTGTTTCTTTCGCAGTTTAGGTCATTTGGGGCCAATCTACATGCTGGACGATATAGTTCGCAATCGATAA

Protein Analysis

665

Amino Acids

74.77

Weight (kDa)

6.79

Isoelectric Point (pI)

27.39

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_long PF17177 125 - 240 4.5e-06 Pentacotripeptide-repeat region of PRORP
PPR_2 PF13041 148 - 195 5.5e-15 PPR repeat family
PPR_3 PF13812 150 - 195 1.8e-08 Pentatricopeptide repeat domain
PPR_3 PF13812 170 - 227 1.4e-08 Pentatricopeptide repeat domain
PPR_1 PF12854 177 - 210 1.1e-11 PPR repeat
PPR PF01535 184 - 214 3.3e-07 PPR repeat
PPR_2 PF13041 185 - 230 2.1e-15 PPR repeat family
PPR_1 PF12854 212 - 240 9.7e-09 PPR repeat
PPR_3 PF13812 247 - 292 4.1e-06 Pentatricopeptide repeat domain
PPR_2 PF13041 248 - 294 1.2e-15 PPR repeat family
PPR PF01535 250 - 279 7.9e-07 PPR repeat
TPR_24 PF23276 250 - 343 6.8e-06 Fungal tetratrico peptide repeats
PPR_1 PF12854 250 - 275 4.7e-07 PPR repeat
PPR_3 PF13812 269 - 328 1.4e-11 Pentatricopeptide repeat domain
PPR_1 PF12854 277 - 309 6e-06 PPR repeat
PPR_2 PF13041 281 - 328 1.6e-13 PPR repeat family
PPR_1 PF12854 312 - 344 7e-10 PPR repeat
PPR PF01535 320 - 345 9.4e-06 PPR repeat
PPR_2 PF13041 321 - 364 2.5e-10 PPR repeat family
PPR_1 PF12854 349 - 379 8.1e-09 PPR repeat
PPR_3 PF13812 349 - 396 9.3e-10 Pentatricopeptide repeat domain
PPR_2 PF13041 351 - 400 1.3e-17 PPR repeat family
PPR_1 PF12854 382 - 414 5.7e-08 PPR repeat
PPR_3 PF13812 386 - 432 1.5e-06 Pentatricopeptide repeat domain
PPR_2 PF13041 393 - 435 1.2e-09 PPR repeat family
PPR_2 PF13041 421 - 469 8e-14 PPR repeat family
PPR_long PF17177 439 - 526 2.8e-06 Pentacotripeptide-repeat region of PRORP
PPR_3 PF13812 444 - 500 3e-10 Pentatricopeptide repeat domain
TPR_24 PF23276 447 - 551 6.9e-06 Fungal tetratrico peptide repeats
PPR_1 PF12854 453 - 485 1.1e-13 PPR repeat
PPR_2 PF13041 456 - 505 1.3e-15 PPR repeat family
PPR PF01535 459 - 489 8.9e-07 PPR repeat
PPR_1 PF12854 487 - 519 2.7e-06 PPR repeat
PPR_2 PF13041 491 - 540 3.8e-13 PPR repeat family
PPR_3 PF13812 515 - 572 4.1e-07 Pentatricopeptide repeat domain
PPR_1 PF12854 522 - 554 3e-10 PPR repeat
PPR_2 PF13041 527 - 575 3.7e-13 PPR repeat family
PPR PF01535 529 - 558 1e-07 PPR repeat
PPR_1 PF12854 561 - 588 5e-07 PPR repeat
PPR_2 PF13041 562 - 611 7.3e-08 PPR repeat family
PPR_2 PF13041 597 - 645 1.1e-06 PPR repeat family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 558, 753
AccB7I CCANNNNNTGG 1 cut(s) 1135
AccI GTMKAC 1 cut(s) 688
AciI CCGC 2 cut(s) 1258, 1924
AclWI GGATC 1 cut(s) 1895
AcsI RAATTY 3 cut(s) 422, 1306, 1579
AcuI CTGAAG 1 cut(s) 1374
AfaI GTAC 5 cut(s) 296, 857, 1002, 1067, 1080
AfiI CCNNNNNNNGG 3 cut(s) 1135, 1900, 1901
AflIII ACRYGT 1 cut(s) 1386
AhlI ACTAGT 1 cut(s) 1808
AjnI CCWGG 1 cut(s) 710
AjuI GAANNNNNNNTTGG 2 cut(s) 1408, 1440
AleI CACNNNNGTG 1 cut(s) 671
Alw21I GWGCWC 4 cut(s) 168, 228, 335, 607
Alw26I GTCTC 3 cut(s) 1091, 1220, 1511
AlwI GGATC 1 cut(s) 1895
Ama87I CYCGRG 1 cut(s) 1037
AoxI GGCC 3 cut(s) 393, 1851, 1955
ApeKI GCWGC 3 cut(s) 28, 1149, 1349
ApoI RAATTY 3 cut(s) 422, 1306, 1579
ArsI GACNNNNNNTTYG 4 cut(s) 36, 68, 426, 458
AseI ATTAAT 1 cut(s) 870
Asp700I GAANNNNTTC 2 cut(s) 404, 1523
AspS9I GGNCC 1 cut(s) 1955
AsuHPI GGTGA 3 cut(s) 449, 775, 1217
AsuII TTCGAA 1 cut(s) 1527
AvaI CYCGRG 1 cut(s) 1037
BaeGI GKGCMC 1 cut(s) 1907
BanII GRGCYC 1 cut(s) 179
BarI GAAGNNNNNNTAC 2 cut(s) 984, 1016
Bbv12I GWGCWC 4 cut(s) 168, 228, 335, 607
BbvI GCAGC 3 cut(s) 15, 1136, 1336
BciT130I CCWGG 1 cut(s) 712
BclI TGATCA 1 cut(s) 357
BcoDI GTCTC 3 cut(s) 1091, 1220, 1511
BcuI ACTAGT 1 cut(s) 1808
BfaI CTAG 1 cut(s) 1809
BfmI CTRYAG 3 cut(s) 409, 669, 1300
BisI GCNGC 4 cut(s) 29, 1150, 1258, 1350
BlpI GCTNAGC 2 cut(s) 387, 476
BlsI GCNGC 4 cut(s) 30, 1151, 1259, 1351
BmcAI AGTACT 1 cut(s) 296
Bme1390I CCNGG 1 cut(s) 712
BmeT110I CYCGRG 1 cut(s) 1037
BmgT120I GGNCC 1 cut(s) 1955
BmiI GGNNCC 3 cut(s) 540, 1235, 1956
BmrFI CCNGG 1 cut(s) 712
BmsI GCATC 5 cut(s) 457, 1102, 1229, 1650, 1675
Bpu1102I GCTNAGC 2 cut(s) 387, 476
Bpu14I TTCGAA 1 cut(s) 1527
Bsa29I ATCGAT 1 cut(s) 1990
BsaAI YACGTR 1 cut(s) 855
BsaI GGTCTC 2 cut(s) 1091, 1511
BsaJI CCNNGG 3 cut(s) 711, 1249, 1632
BsaXI ACNNNNNCTCC 2 cut(s) 259, 289
Bsc4I CCNNNNNNNGG 3 cut(s) 1135, 1900, 1901
Bse1I ACTGG 1 cut(s) 1503
Bse3DI GCAATG 1 cut(s) 278
BseBI CCWGG 1 cut(s) 712
BseCI ATCGAT 1 cut(s) 1990
BseDI CCNNGG 3 cut(s) 711, 1249, 1632
BseGI GGATG 8 cut(s) 289, 472, 540, 944, 1035, 1117, 1297, 1575
BseLI CCNNNNNNNGG 3 cut(s) 1135, 1900, 1901
BseMI GCAATG 1 cut(s) 278
BseMII CTCAG 3 cut(s) 327, 378, 1215
BseNI ACTGG 1 cut(s) 1503
BseRI GAGGAG 2 cut(s) 353, 809
BseSI GKGCMC 1 cut(s) 1907
BseXI GCAGC 3 cut(s) 15, 1136, 1336
BseYI CCCAGC 1 cut(s) 377
BsgI GTGCAG 3 cut(s) 311, 1075, 1791
BshFI GGCC 3 cut(s) 395, 1853, 1957
BshVI ATCGAT 1 cut(s) 1990
BsiHKAI GWGCWC 4 cut(s) 168, 228, 335, 607
BsiHKCI CYCGRG 1 cut(s) 1037
BsiSI CCGG 1 cut(s) 647
BslFI GGGAC 1 cut(s) 38
BslI CCNNNNNNNGG 3 cut(s) 1135, 1900, 1901
BsmAI GTCTC 3 cut(s) 1091, 1220, 1511
BsmFI GGGAC 1 cut(s) 38
BsmI GAATGC 1 cut(s) 1918
BsnI GGCC 3 cut(s) 395, 1853, 1957
Bso31I GGTCTC 2 cut(s) 1091, 1511
BsoBI CYCGRG 1 cut(s) 1037
Bsp119I TTCGAA 1 cut(s) 1527
Bsp1286I GDGCHC 6 cut(s) 168, 179, 228, 335, 607, 1907
Bsp143I GATC 4 cut(s) 115, 357, 1689, 1887
Bsp1720I GCTNAGC 2 cut(s) 387, 476
BspACI CCGC 2 cut(s) 1258, 1924
BspANI GGCC 3 cut(s) 395, 1853, 1957
BspCNI CTCAG 3 cut(s) 328, 379, 1216
BspDI ATCGAT 1 cut(s) 1990
BspLI GGNNCC 3 cut(s) 540, 1235, 1956
BspPI GGATC 1 cut(s) 1895
BspT104I TTCGAA 1 cut(s) 1527
BspTNI GGTCTC 2 cut(s) 1091, 1511
BsrDI GCAATG 1 cut(s) 278
BsrI ACTGG 1 cut(s) 1503
BssECI CCNNGG 3 cut(s) 711, 1249, 1632
BssMI GATC 4 cut(s) 115, 357, 1689, 1887
BssT1I CCWWGG 1 cut(s) 1632
Bst2UI CCWGG 1 cut(s) 712
Bst4CI ACNGT 5 cut(s) 442, 670, 1250, 1375, 1505
Bst6I CTCTTC 1 cut(s) 1514
BstBAI YACGTR 1 cut(s) 855
BstBI TTCGAA 1 cut(s) 1527
BstC8I GCNNGC 4 cut(s) 375, 393, 720, 747
BstDEI CTNAG 5 cut(s) 336, 387, 476, 630, 1224
BstDSI CCRYGG 1 cut(s) 1249
BstEII GGTNACC 1 cut(s) 1205
BstF5I GGATG 8 cut(s) 289, 472, 540, 944, 1035, 1117, 1297, 1575
BstKTI GATC 4 cut(s) 118, 360, 1692, 1890
BstMAI GTCTC 3 cut(s) 1091, 1220, 1511
BstMBI GATC 4 cut(s) 115, 357, 1689, 1887
BstMWI GCNNNNNNNGC 5 cut(s) 268, 383, 392, 755, 917
BstNI CCWGG 1 cut(s) 712
BstNSI RCATGY 3 cut(s) 1284, 1441, 1969
BstPI GGTNACC 1 cut(s) 1205
BstSCI CCNGG 1 cut(s) 710
BstSFI CTRYAG 3 cut(s) 409, 669, 1300
BstSLI GKGCMC 1 cut(s) 1907
BstV1I GCAGC 3 cut(s) 15, 1136, 1336
BstX2I RGATCY 1 cut(s) 1887
BstYI RGATCY 1 cut(s) 1887
Bsu15I ATCGAT 1 cut(s) 1990
BsuRI GGCC 3 cut(s) 395, 1853, 1957
BsuTUI ATCGAT 1 cut(s) 1990
BtgI CCRYGG 1 cut(s) 1249
BtsCI GGATG 8 cut(s) 289, 472, 540, 944, 1035, 1117, 1297, 1575
BtsI GCAGTG 2 cut(s) 660, 1740
BtsIMutI CAGTG 4 cut(s) 438, 660, 666, 1740
Cac8I GCNNGC 4 cut(s) 375, 393, 720, 747
Cfr13I GGNCC 1 cut(s) 1955
ClaI ATCGAT 1 cut(s) 1990
CseI GACGC 2 cut(s) 27, 659
Csp6I GTAC 5 cut(s) 295, 856, 1001, 1066, 1079
CviQI GTAC 5 cut(s) 295, 856, 1001, 1066, 1079
DdeI CTNAG 5 cut(s) 336, 387, 476, 630, 1224
DpnI GATC 4 cut(s) 117, 359, 1691, 1889
DpnII GATC 4 cut(s) 115, 357, 1689, 1887
Eam1104I CTCTTC 1 cut(s) 1514
EarI CTCTTC 1 cut(s) 1514
Eco130I CCWWGG 1 cut(s) 1632
Eco147I AGGCCT 1 cut(s) 395
Eco24I GRGCYC 1 cut(s) 179
Eco31I GGTCTC 2 cut(s) 1091, 1511
Eco57I CTGAAG 1 cut(s) 1374
Eco88I CYCGRG 1 cut(s) 1037
Eco91I GGTNACC 1 cut(s) 1205
EcoO65I GGTNACC 1 cut(s) 1205
EcoRII CCWGG 1 cut(s) 710
EcoT14I CCWWGG 1 cut(s) 1632
EcoT22I ATGCAT 1 cut(s) 1286
EcoT38I GRGCYC 1 cut(s) 179
ErhI CCWWGG 1 cut(s) 1632
FaqI GGGAC 1 cut(s) 38
FauNDI CATATG 1 cut(s) 1239
FbaI TGATCA 1 cut(s) 357
FblI GTMKAC 1 cut(s) 688
Fnu4HI GCNGC 4 cut(s) 29, 1150, 1258, 1350
FokI GGATG 8 cut(s) 296, 479, 547, 951, 1042, 1124, 1304, 1582
FriOI GRGCYC 1 cut(s) 179
Fsp4HI GCNGC 4 cut(s) 29, 1150, 1258, 1350
FspBI CTAG 1 cut(s) 1809
GluI GCNGC 4 cut(s) 29, 1150, 1258, 1350
GsaI CCCAGC 1 cut(s) 381
HaeIII GGCC 3 cut(s) 395, 1853, 1957
HapII CCGG 1 cut(s) 647
HgaI GACGC 2 cut(s) 27, 659
HincII GTYRAC 1 cut(s) 1435
HindII GTYRAC 1 cut(s) 1435
HindIII AAGCTT 2 cut(s) 260, 1533
HinfI GANTC 6 cut(s) 134, 899, 1024, 1033, 1524, 1747
HpaII CCGG 1 cut(s) 647
HphI GGTGA 3 cut(s) 449, 775, 1217
Hpy166II GTNNAC 5 cut(s) 40, 689, 955, 1068, 1435
Hpy188I TCNGA 9 cut(s) 139, 163, 337, 495, 883, 1029, 1182, 1225, 1368
Hpy188III TCNNGA 5 cut(s) 113, 213, 445, 1013, 1037
Hpy8I GTNNAC 5 cut(s) 40, 689, 955, 1068, 1435
HpyAV CCTTC 9 cut(s) 4, 8, 565, 628, 691, 986, 1349, 1721, 1877
HpyCH4III ACNGT 5 cut(s) 442, 670, 1250, 1375, 1505
HpyCH4IV ACGT 2 cut(s) 854, 1388
HpyF10VI GCNNNNNNNGC 5 cut(s) 268, 383, 392, 755, 917
HpyF3I CTNAG 5 cut(s) 336, 387, 476, 630, 1224
HpySE526I ACGT 2 cut(s) 854, 1388
Ksp22I TGATCA 1 cut(s) 357
Kzo9I GATC 4 cut(s) 115, 357, 1689, 1887
LmnI GCTCC 4 cut(s) 26, 340, 538, 715
Lsp1109I GCAGC 3 cut(s) 15, 1136, 1336
LweI GCATC 5 cut(s) 457, 1102, 1229, 1650, 1675
MaeI CTAG 1 cut(s) 1809
MaeII ACGT 2 cut(s) 854, 1388
MaeIII GTNAC 5 cut(s) 1162, 1205, 1375, 1494, 1585
MalI GATC 4 cut(s) 117, 359, 1691, 1889
MboI GATC 4 cut(s) 115, 357, 1689, 1887
MboII GAAGA 5 cut(s) 412, 535, 1501, 1541, 1571
MfeI CAATTG 2 cut(s) 201, 1717
MflI RGATCY 1 cut(s) 1887
MhlI GDGCHC 6 cut(s) 168, 179, 228, 335, 607, 1907
MlyI GAGTC 2 cut(s) 143, 908
Mph1103I ATGCAT 1 cut(s) 1286
MroXI GAANNNNTTC 2 cut(s) 404, 1523
MseI TTAA 3 cut(s) 501, 870, 1383
MslI CAYNNNNRTG 1 cut(s) 671
MspA1I CMGCKG 1 cut(s) 1753
MspI CCGG 1 cut(s) 647
MspR9I CCNGG 1 cut(s) 712
MunI CAATTG 2 cut(s) 201, 1717
Mva1269I GAATGC 1 cut(s) 1918
MvaI CCWGG 1 cut(s) 712
MwoI GCNNNNNNNGC 5 cut(s) 268, 383, 392, 755, 917
NdeI CATATG 1 cut(s) 1239
NdeII GATC 4 cut(s) 115, 357, 1689, 1887
NlaIV GGNNCC 3 cut(s) 540, 1235, 1956
NmuCI GTSAC 2 cut(s) 1162, 1205
NsiI ATGCAT 1 cut(s) 1286
NspI RCATGY 3 cut(s) 1284, 1441, 1969
NspV TTCGAA 1 cut(s) 1527
OliI CACNNNNGTG 1 cut(s) 671
PaeR7I CTCGAG 1 cut(s) 1037
PceI AGGCCT 1 cut(s) 395
PcsI WCGNNNNNNNCGW 1 cut(s) 860
PctI GAATGC 1 cut(s) 1918
PdmI GAANNNNTTC 2 cut(s) 404, 1523
PfeI GAWTC 4 cut(s) 1024, 1033, 1524, 1747
PflMI CCANNNNNTGG 1 cut(s) 1135
PkrI GCNGC 4 cut(s) 30, 1151, 1259, 1351
PleI GAGTC 2 cut(s) 142, 907
PpsI GAGTC 2 cut(s) 142, 907
Ppu21I YACGTR 1 cut(s) 855
PshBI ATTAAT 1 cut(s) 870
PsiI TTATAA 2 cut(s) 558, 753
Psp6I CCWGG 1 cut(s) 710
PspEI GGTNACC 1 cut(s) 1205
PspFI CCCAGC 1 cut(s) 377
PspGI CCWGG 1 cut(s) 710
PspN4I GGNNCC 3 cut(s) 540, 1235, 1956
PspPI GGNCC 1 cut(s) 1955
PsuI RGATCY 1 cut(s) 1887
PvuII CAGCTG 1 cut(s) 1753
RsaI GTAC 5 cut(s) 296, 857, 1002, 1067, 1080
RsaNI GTAC 5 cut(s) 295, 856, 1001, 1066, 1079
RseI CAYNNNNRTG 1 cut(s) 671
SaqAI TTAA 3 cut(s) 501, 870, 1383
SatI GCNGC 4 cut(s) 29, 1150, 1258, 1350
Sau3AI GATC 4 cut(s) 115, 357, 1689, 1887
Sau96I GGNCC 1 cut(s) 1955
ScaI AGTACT 1 cut(s) 296
SchI GAGTC 2 cut(s) 143, 908
ScrFI CCNGG 1 cut(s) 712
SduI GDGCHC 6 cut(s) 168, 179, 228, 335, 607, 1907
SfaNI GCATC 5 cut(s) 457, 1102, 1229, 1650, 1675
SfcI CTRYAG 3 cut(s) 409, 669, 1300
Sfr274I CTCGAG 1 cut(s) 1037
SfuI TTCGAA 1 cut(s) 1527
SlaI CTCGAG 1 cut(s) 1037
SmiMI CAYNNNNRTG 1 cut(s) 671
SmlI CTYRAG 1 cut(s) 1037
SmoI CTYRAG 1 cut(s) 1037
SpeI ACTAGT 1 cut(s) 1808
SseBI AGGCCT 1 cut(s) 395
SsiI CCGC 2 cut(s) 1258, 1924
SspI AATATT 1 cut(s) 1057
SspMI CTAG 1 cut(s) 1809
StuI AGGCCT 1 cut(s) 395
StyD4I CCNGG 1 cut(s) 710
StyI CCWWGG 1 cut(s) 1632
TaaI ACNGT 5 cut(s) 442, 670, 1250, 1375, 1505
TaiI ACGT 2 cut(s) 857, 1391
TaqI TCGA 6 cut(s) 102, 1038, 1443, 1527, 1758, 1990
TatI WGTACW 2 cut(s) 294, 1000
TauI GCSGC 1 cut(s) 1260
TfiI GAWTC 4 cut(s) 1024, 1033, 1524, 1747
Tru1I TTAA 3 cut(s) 501, 870, 1383
Tru9I TTAA 3 cut(s) 501, 870, 1383
TscAI CASTG 4 cut(s) 445, 660, 673, 1747
TseFI GTSAC 2 cut(s) 1162, 1205
TseI GCWGC 3 cut(s) 28, 1149, 1349
Tsp45I GTSAC 2 cut(s) 1162, 1205
TspDTI ATGAA 6 cut(s) 326, 536, 1020, 1259, 1307, 1592
TspRI CASTG 4 cut(s) 445, 660, 673, 1747
Van91I CCANNNNNTGG 1 cut(s) 1135
VspI ATTAAT 1 cut(s) 870
XapI RAATTY 3 cut(s) 422, 1306, 1579
XceI RCATGY 3 cut(s) 1284, 1441, 1969
XhoI CTCGAG 1 cut(s) 1037
XmiI GTMKAC 1 cut(s) 688
XmnI GAANNNNTTC 2 cut(s) 404, 1523
XspI CTAG 1 cut(s) 1809
ZrmI AGTACT 1 cut(s) 296
Zsp2I ATGCAT 1 cut(s) 1286
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.