Rh4CG283700

Pentatricopeptide repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4C
OG0008613
Physical Location & Seq
Forward (+)
54081625 .. 54083370
1746 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh4CG283700.1

Sequence Viewer

Length: 1746 bp
ATGATTGAGAAGCTTGGGAGCCAATGTGAAATGGATGGTGTGCAGTACTTGATGCACCAAATGAAATTGGAGGGGGTTGGTTGCTCTGAGGAGTTGTTTATAAGTGTGGTGAAGTCTTACAGGCGAGCTGGGTTGGCTGAGCAGGCATTGAAGATGTTCTATAGGATAAACGAATTCGGGTGCAAACCCACTGTGAAGATTTACAATCACTTGTTGGATGCATTGCTTTGCGAGAATAGGTTTCAGATGATCAATCCCATATATGGTAACATGAAGAAAGATGGGATGGAGCCGAATGTGTTTACGTATAACATTCTGTTGAAGGCATTGTGTAAGAATGATAGGGTGGATGGTGCACACAAGTTGCTTGTGGAAATGTCTAAGAAGGGATGTTGTCCCGACACGGTGAGCTATACGACTGTAGTGTCTACATTGTGTAGGCTTGGGAAGGTAGATGAAGCGAGGGAGCTTGCTTGTAGATTCGAACCCAATGTGGCTGTTTATAATGCTTTGGTAAATGGGTTGTGCAAGGAGTCCAAATTTGAAGAGGCATTGGCATTGCTGGTTGAAATGGCGGGTAAGGGAATAGACCCTAATGTCATTACATACTCGACGATTATTAGTTCTTTTTCTGATATGAGGAATGTTGAGTCTGCTCTTGCTGTTTTGGCGAAAATGTTTGTGAGGGGATGTAGGCCTAACGTTCACACCTTTACTTCCTTGATAAAGGGTTATTTTATGGAAGGCAGAGTTAGTGAAGCTCTTGACTTGTGGAACCGCATGGTTCGTGAGGGATTTGAGCCCAATGTTGTTGCATATACAACTGTTATACACGGTCTCTGCTCTGTTGGGAATATGCGTGAAGCTGTATCTGTTTTACATGAGATGGAGATAAAAGGTTGCTCTCCAAATGTGAGCACATATAGCACTCTTATTGATGGGTTTGCAAAAGCTGGCAACCTTGTTGGTGCATCGGAGACTTGGAACAATATGATGAGCCGTGGTTGCCGTCCTAATGTCATAGCATATACGTGCATGGTGGATGTTCTGTGCAGGAAATATATGTTTCATCGAGCTCAATGTCTTTTAGAAAATATGACTGCCGAAGGCTGTCCACCAAATACAGTTACATTTAACACATTTATCAAAGGGTTGTGTGAAGATGGAGAAGTAGATTGGGCTGTTAGGGTGCTCAACAAGATGAGGGAAAATGGGTGTTTGCCTAATATTACGACATATAATGAGTTACTGGATGGTCTGTTCAAGGTGAACAGATTTGAAGAAGCATTTGGACTTGTCAAGGAGATAGATGAAAAGGGACTGAAACTGAATTTGGTAACATACAACACCATTTTGAATGGTTTTTGTCGCGCTGGGATGACCAAAGAGGCTATGCAGGTTTTTAGCAACATGCTAACACATGGAATAAAGCCTGATGCCATTACATATAACATACTGATATATTTCTATTGCAAGCAAGGCAGGATAAAGACTGCTACTGAGCTTTTCAACAGCACTGGTGCAGCAAAGGAATGGTGCCCGGATGTAATAGCTTATACTAGTCTTCTATGGGGGATTTGTAACTCGGTAGGTCTAGATGAGGCCATGGTTCATCTTGATAAGATGATAAGGAAAGGTATCTGCCCCAACATTGGCACATGGGATGTGTTGGTGCGGTGCTTCTTTAGCAGCTTAGGTCATTTGGGGCCAATCTACATACTGGATGATATTCTTCGTGAAGGATAA

Protein Analysis

581

Amino Acids

65.12

Weight (kDa)

6.58

Isoelectric Point (pI)

24.73

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_2 PF13041 63 - 112 9.8e-14 PPR repeat family
PPR_3 PF13812 68 - 112 2.8e-08 Pentatricopeptide repeat domain
PPR_3 PF13812 88 - 144 9.2e-08 Pentatricopeptide repeat domain
PPR_1 PF12854 94 - 127 6.9e-12 PPR repeat
PPR_2 PF13041 100 - 147 1.1e-15 PPR repeat family
PPR PF01535 101 - 131 2.6e-07 PPR repeat
PPR_1 PF12854 129 - 157 1.2e-09 PPR repeat
PPR_3 PF13812 161 - 212 3.5e-07 Pentatricopeptide repeat domain
PPR_long PF17177 161 - 243 5.5e-08 Pentacotripeptide-repeat region of PRORP
PPR_1 PF12854 161 - 191 1.1e-08 PPR repeat
PPR_2 PF13041 163 - 210 6e-15 PPR repeat family
PPR PF01535 167 - 196 1.5e-06 PPR repeat
PPR_3 PF13812 187 - 245 1e-10 Pentatricopeptide repeat domain
PPR_1 PF12854 194 - 226 2.6e-06 PPR repeat
PPR_2 PF13041 199 - 245 3.9e-12 PPR repeat family
PPR_1 PF12854 229 - 262 5.9e-10 PPR repeat
PPR_2 PF13041 233 - 281 6.6e-17 PPR repeat family
PPR PF01535 237 - 266 1.3e-07 PPR repeat
PPR_long PF17177 251 - 337 1.6e-06 Pentacotripeptide-repeat region of PRORP
PPR_3 PF13812 259 - 313 1.4e-13 Pentatricopeptide repeat domain
PPR_1 PF12854 265 - 297 2.2e-11 PPR repeat
PPR_2 PF13041 268 - 317 4.9e-19 PPR repeat family
PPR PF01535 271 - 301 2e-07 PPR repeat
PPR_3 PF13812 291 - 349 6.7e-11 Pentatricopeptide repeat domain
PPR_1 PF12854 299 - 331 1.8e-09 PPR repeat
PPR_2 PF13041 310 - 352 5.6e-10 PPR repeat family
PPR_long PF17177 326 - 417 6.7e-06 Pentacotripeptide-repeat region of PRORP
PPR_2 PF13041 338 - 386 2.4e-13 PPR repeat family
PPR_3 PF13812 362 - 417 6.2e-11 Pentatricopeptide repeat domain
TPR_24 PF23276 366 - 470 4.3e-08 Fungal tetratrico peptide repeats
PPR_1 PF12854 370 - 402 6.1e-14 PPR repeat
PPR_2 PF13041 373 - 422 8.1e-16 PPR repeat family
PPR PF01535 376 - 406 5.8e-07 PPR repeat
PPR_long PF17177 395 - 497 5.4e-09 Pentacotripeptide-repeat region of PRORP
PPR_1 PF12854 404 - 435 5.9e-06 PPR repeat
PPR_2 PF13041 408 - 457 1.6e-14 PPR repeat family
PPR_3 PF13812 432 - 490 8.4e-14 Pentatricopeptide repeat domain
PPR_1 PF12854 439 - 471 4.8e-13 PPR repeat
PPR_2 PF13041 444 - 492 2.7e-17 PPR repeat family
PPR PF01535 446 - 476 2.1e-08 PPR repeat
PPR_1 PF12854 475 - 504 1.2e-10 PPR repeat
PPR_2 PF13041 514 - 561 3.8e-07 PPR repeat family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 101, 504
AasI GACNNNNNNGTC 2 cut(s) 424, 596
Acc36I ACCTGC 1 cut(s) 1387
AccB1I GGYRCC 1 cut(s) 1536
AccI GTMKAC 1 cut(s) 428
AccII CGCG 1 cut(s) 1371
AciI CCGC 3 cut(s) 575, 778, 1675
AclI AACGTT 1 cut(s) 702
AcsI RAATTY 3 cut(s) 173, 539, 1330
AfaI GTAC 1 cut(s) 47
AfiI CCNNNNNNNGG 2 cut(s) 263, 1652
AgsI TTSAA 8 cut(s) 151, 322, 545, 569, 1264, 1280, 1357, 1510
AhlI ACTAGT 1 cut(s) 1559
AjuI GAANNNNNNNTTGG 4 cut(s) 1272, 1304, 1316, 1348
AloI GAACNNNNNNTCC 2 cut(s) 1244, 1276
Alw21I GWGCWC 4 cut(s) 358, 920, 1078, 1194
Alw26I GTCTC 2 cut(s) 842, 971
Alw44I GTGCAC 1 cut(s) 354
AoxI GGCC 3 cut(s) 695, 1602, 1706
ApaLI GTGCAC 1 cut(s) 354
ApeKI GCWGC 2 cut(s) 1523, 1689
ApoI RAATTY 3 cut(s) 173, 539, 1330
Asp700I GAANNNNTTC 1 cut(s) 155
AspLEI GCGC 1 cut(s) 1373
AspS9I GGNCC 1 cut(s) 1706
AsuC2I CCSGG 1 cut(s) 1541
AsuHPI GGTGA 3 cut(s) 121, 418, 1279
AsuII TTCGAA 1 cut(s) 483
BaeGI GKGCMC 2 cut(s) 358, 1541
BanI GGYRCC 1 cut(s) 1536
BanII GRGCYC 2 cut(s) 804, 1078
BbsI GAAGAC 1 cut(s) 1556
Bbv12I GWGCWC 4 cut(s) 358, 920, 1078, 1194
BbvI GCAGC 2 cut(s) 1535, 1701
BccI CCATC 8 cut(s) 29, 275, 280, 344, 880, 932, 1157, 1247
BceAI ACGGC 2 cut(s) 984, 993
BclI TGATCA 1 cut(s) 249
BcnI CCSGG 1 cut(s) 1541
BcoDI GTCTC 2 cut(s) 842, 971
BcuI ACTAGT 1 cut(s) 1559
BfaI CTAG 2 cut(s) 1560, 1595
BfmI CTRYAG 2 cut(s) 160, 420
BfuAI ACCTGC 1 cut(s) 1387
BisI GCNGC 2 cut(s) 1524, 1690
BlpI GCTNAGC 1 cut(s) 138
BlsI GCNGC 2 cut(s) 1525, 1691
BmcAI AGTACT 1 cut(s) 47
Bme1390I CCNGG 1 cut(s) 1541
BmgT120I GGNCC 1 cut(s) 1706
BmiI GGNNCC 5 cut(s) 20, 291, 776, 1538, 1707
BmrFI CCNGG 1 cut(s) 1541
BmsI GCATC 4 cut(s) 42, 208, 980, 1426
BpiI GAAGAC 1 cut(s) 1556
Bpu10I CCTNAGC 1 cut(s) 1693
Bpu1102I GCTNAGC 1 cut(s) 138
Bpu14I TTCGAA 1 cut(s) 483
BpuMI CCSGG 1 cut(s) 1541
BsaAI YACGTR 2 cut(s) 306, 1032
BsaI GGTCTC 1 cut(s) 842
BsaJI CCNNGG 2 cut(s) 1000, 1605
BsaXI ACNNNNNCTCC 2 cut(s) 10, 40
Bsc4I CCNNNNNNNGG 2 cut(s) 263, 1652
Bse1I ACTGG 3 cut(s) 1254, 1522, 1725
Bse3DI GCAATG 2 cut(s) 221, 557
BseDI CCNNGG 2 cut(s) 1000, 1605
BseLI CCNNNNNNNGG 2 cut(s) 263, 1652
BseMI GCAATG 2 cut(s) 221, 557
BseMII CTCAG 3 cut(s) 78, 129, 1491
BseNI ACTGG 3 cut(s) 1254, 1522, 1725
BseRI GAGGAG 1 cut(s) 104
BseSI GKGCMC 2 cut(s) 358, 1541
BseXI GCAGC 2 cut(s) 1535, 1701
BseYI CCCAGC 2 cut(s) 128, 1373
BsgI GTGCAG 3 cut(s) 62, 1072, 1542
Bsh1236I CGCG 1 cut(s) 1371
BshFI GGCC 3 cut(s) 697, 1604, 1708
BshNI GGYRCC 1 cut(s) 1536
BsiHKAI GWGCWC 4 cut(s) 358, 920, 1078, 1194
BsiSI CCGG 1 cut(s) 1541
BslFI GGGAC 2 cut(s) 381, 1332
BslI CCNNNNNNNGG 2 cut(s) 263, 1652
BsmAI GTCTC 2 cut(s) 842, 971
BsmFI GGGAC 2 cut(s) 381, 1332
BsnI GGCC 3 cut(s) 697, 1604, 1708
Bso31I GGTCTC 1 cut(s) 842
Bsp119I TTCGAA 1 cut(s) 483
Bsp1286I GDGCHC 6 cut(s) 358, 804, 920, 1078, 1194, 1541
Bsp143I GATC 1 cut(s) 249
Bsp1720I GCTNAGC 1 cut(s) 138
Bsp19I CCATGG 1 cut(s) 1605
BspACI CCGC 3 cut(s) 575, 778, 1675
BspANI GGCC 3 cut(s) 697, 1604, 1708
BspCNI CTCAG 3 cut(s) 79, 130, 1492
BspFNI CGCG 1 cut(s) 1371
BspLI GGNNCC 5 cut(s) 20, 291, 776, 1538, 1707
BspMI ACCTGC 1 cut(s) 1387
BspT104I TTCGAA 1 cut(s) 483
BspT107I GGYRCC 1 cut(s) 1536
BspTNI GGTCTC 1 cut(s) 842
BsrDI GCAATG 2 cut(s) 221, 557
BsrI ACTGG 3 cut(s) 1254, 1522, 1725
BssECI CCNNGG 2 cut(s) 1000, 1605
BssMI GATC 1 cut(s) 249
BssT1I CCWWGG 1 cut(s) 1605
Bst4CI ACNGT 6 cut(s) 193, 406, 421, 826, 836, 1126
Bst6I CTCTTC 1 cut(s) 540
BstBAI YACGTR 2 cut(s) 306, 1032
BstBI TTCGAA 1 cut(s) 483
BstC8I GCNNGC 5 cut(s) 126, 144, 471, 955, 1475
BstDEI CTNAG 5 cut(s) 87, 138, 381, 1500, 1693
BstDSI CCRYGG 2 cut(s) 1000, 1605
BstFNI CGCG 1 cut(s) 1371
BstHHI GCGC 1 cut(s) 1373
BstKTI GATC 1 cut(s) 252
BstMAI GTCTC 2 cut(s) 842, 971
BstMBI GATC 1 cut(s) 249
BstMWI GCNNNNNNNGC 7 cut(s) 134, 143, 668, 924, 1005, 1479, 1686
BstNSI RCATGY 1 cut(s) 1414
BstSCI CCNGG 1 cut(s) 1539
BstSFI CTRYAG 2 cut(s) 160, 420
BstSLI GKGCMC 2 cut(s) 358, 1541
BstSNI TACGTA 1 cut(s) 306
BstUI CGCG 1 cut(s) 1371
BstV1I GCAGC 2 cut(s) 1535, 1701
BstV2I GAAGAC 1 cut(s) 1556
BsuRI GGCC 3 cut(s) 697, 1604, 1708
BtgI CCRYGG 2 cut(s) 1000, 1605
BtsIMutI CAGTG 2 cut(s) 189, 1515
BveI ACCTGC 1 cut(s) 1387
Cac8I GCNNGC 5 cut(s) 126, 144, 471, 955, 1475
CfoI GCGC 1 cut(s) 1373
Cfr13I GGNCC 1 cut(s) 1706
Csp6I GTAC 1 cut(s) 46
CviAII CATG 8 cut(s) 271, 781, 881, 1036, 1411, 1421, 1606, 1659
CviQI GTAC 1 cut(s) 46
DdeI CTNAG 5 cut(s) 87, 138, 381, 1500, 1693
DpnI GATC 1 cut(s) 251
DpnII GATC 1 cut(s) 249
DrdI GACNNNNNNGTC 2 cut(s) 424, 596
DseDI GACNNNNNNGTC 2 cut(s) 424, 596
Eam1104I CTCTTC 1 cut(s) 540
EarI CTCTTC 1 cut(s) 540
Ecl136II GAGCTC 1 cut(s) 1076
Eco105I TACGTA 1 cut(s) 306
Eco130I CCWWGG 1 cut(s) 1605
Eco147I AGGCCT 1 cut(s) 697
Eco24I GRGCYC 2 cut(s) 804, 1078
Eco31I GGTCTC 1 cut(s) 842
Eco53kI GAGCTC 1 cut(s) 1076
EcoICRI GAGCTC 1 cut(s) 1076
EcoRI GAATTC 1 cut(s) 173
EcoT14I CCWWGG 1 cut(s) 1605
EcoT22I ATGCAT 1 cut(s) 223
EcoT38I GRGCYC 2 cut(s) 804, 1078
ErhI CCWWGG 1 cut(s) 1605
FaeI CATG 8 cut(s) 274, 784, 884, 1039, 1414, 1424, 1609, 1662
FaqI GGGAC 2 cut(s) 381, 1332
FatI CATG 8 cut(s) 270, 780, 880, 1035, 1410, 1420, 1605, 1658
FauI CCCGC 1 cut(s) 568
FbaI TGATCA 1 cut(s) 249
FblI GTMKAC 1 cut(s) 428
Fnu4HI GCNGC 2 cut(s) 1524, 1690
FriOI GRGCYC 2 cut(s) 804, 1078
Fsp4HI GCNGC 2 cut(s) 1524, 1690
FspBI CTAG 2 cut(s) 1560, 1595
GlaI GCGC 1 cut(s) 1372
GluI GCNGC 2 cut(s) 1524, 1690
GsaI CCCAGC 2 cut(s) 132, 1377
HaeIII GGCC 3 cut(s) 697, 1604, 1708
HapII CCGG 1 cut(s) 1541
HhaI GCGC 1 cut(s) 1373
Hin1II CATG 8 cut(s) 274, 784, 884, 1039, 1414, 1424, 1609, 1662
Hin6I GCGC 1 cut(s) 1371
HinP1I GCGC 1 cut(s) 1371
HindIII AAGCTT 1 cut(s) 11
HinfI GANTC 3 cut(s) 480, 533, 650
HpaII CCGG 1 cut(s) 1541
HphI GGTGA 3 cut(s) 121, 418, 1279
Hpy166II GTNNAC 6 cut(s) 303, 356, 429, 706, 1115, 1270
Hpy188I TCNGA 4 cut(s) 88, 246, 634, 976
Hpy188III TCNNGA 6 cut(s) 398, 764, 788, 1595, 1616, 1736
Hpy8I GTNNAC 6 cut(s) 303, 356, 429, 706, 1115, 1270
Hpy99I CGWCG 1 cut(s) 616
HpyAV CCTTC 6 cut(s) 316, 379, 442, 737, 1100, 1733
HpyCH4III ACNGT 6 cut(s) 193, 406, 421, 826, 836, 1126
HpyCH4IV ACGT 3 cut(s) 305, 702, 1031
HpyF10VI GCNNNNNNNGC 7 cut(s) 134, 143, 668, 924, 1005, 1479, 1686
HpyF3I CTNAG 5 cut(s) 87, 138, 381, 1500, 1693
HpySE526I ACGT 3 cut(s) 305, 702, 1031
Hsp92II CATG 8 cut(s) 274, 784, 884, 1039, 1414, 1424, 1609, 1662
HspAI GCGC 1 cut(s) 1371
Ksp22I TGATCA 1 cut(s) 249
Kzo9I GATC 1 cut(s) 249
LmnI GCTCC 3 cut(s) 18, 289, 466
Lsp1109I GCAGC 2 cut(s) 1535, 1701
LweI GCATC 4 cut(s) 42, 208, 980, 1426
MaeI CTAG 2 cut(s) 1560, 1595
MaeII ACGT 3 cut(s) 305, 702, 1031
MaeIII GTNAC 5 cut(s) 266, 1126, 1245, 1336, 1580
MalI GATC 1 cut(s) 251
MboI GATC 1 cut(s) 249
MboII GAAGA 8 cut(s) 163, 208, 286, 557, 1172, 1292, 1556, 1724
MhlI GDGCHC 6 cut(s) 358, 804, 920, 1078, 1194, 1541
MluCI AATT 4 cut(s) 65, 173, 539, 1330
MlyI GAGTC 2 cut(s) 542, 659
MmeI TCCRAC 1 cut(s) 195
Mph1103I ATGCAT 1 cut(s) 223
MroXI GAANNNNTTC 1 cut(s) 155
MseI TTAA 1 cut(s) 1134
MslI CAYNNNNRTG 1 cut(s) 1030
MspI CCGG 1 cut(s) 1541
MspR9I CCNGG 1 cut(s) 1541
MvnI CGCG 1 cut(s) 1371
MwoI GCNNNNNNNGC 7 cut(s) 134, 143, 668, 924, 1005, 1479, 1686
NciI CCSGG 1 cut(s) 1541
NcoI CCATGG 1 cut(s) 1605
NdeII GATC 1 cut(s) 249
NlaIII CATG 8 cut(s) 274, 784, 884, 1039, 1414, 1424, 1609, 1662
NlaIV GGNNCC 5 cut(s) 20, 291, 776, 1538, 1707
NsiI ATGCAT 1 cut(s) 223
NspI RCATGY 1 cut(s) 1414
NspV TTCGAA 1 cut(s) 483
PceI AGGCCT 1 cut(s) 697
PdmI GAANNNNTTC 1 cut(s) 155
PfeI GAWTC 1 cut(s) 480
PkrI GCNGC 2 cut(s) 1525, 1691
PleI GAGTC 2 cut(s) 541, 658
PpsI GAGTC 2 cut(s) 541, 658
Ppu21I YACGTR 2 cut(s) 306, 1032
PsiI TTATAA 2 cut(s) 101, 504
Psp124BI GAGCTC 1 cut(s) 1078
Psp1406I AACGTT 1 cut(s) 702
PspFI CCCAGC 2 cut(s) 128, 1373
PspN4I GGNNCC 5 cut(s) 20, 291, 776, 1538, 1707
PspPI GGNCC 1 cut(s) 1706
RsaI GTAC 1 cut(s) 47
RsaNI GTAC 1 cut(s) 46
RseI CAYNNNNRTG 1 cut(s) 1030
SacI GAGCTC 1 cut(s) 1078
SaqAI TTAA 1 cut(s) 1134
SatI GCNGC 2 cut(s) 1524, 1690
Sau3AI GATC 1 cut(s) 249
Sau96I GGNCC 1 cut(s) 1706
ScaI AGTACT 1 cut(s) 47
SchI GAGTC 2 cut(s) 542, 659
ScrFI CCNGG 1 cut(s) 1541
SduI GDGCHC 6 cut(s) 358, 804, 920, 1078, 1194, 1541
SfaNI GCATC 4 cut(s) 42, 208, 980, 1426
SfcI CTRYAG 2 cut(s) 160, 420
SfuI TTCGAA 1 cut(s) 483
SmiMI CAYNNNNRTG 1 cut(s) 1030
SnaBI TACGTA 1 cut(s) 306
SpeI ACTAGT 1 cut(s) 1559
Sse9I AATT 4 cut(s) 65, 173, 539, 1330
SseBI AGGCCT 1 cut(s) 697
SsiI CCGC 3 cut(s) 575, 778, 1675
SspI AATATT 1 cut(s) 1228
SspMI CTAG 2 cut(s) 1560, 1595
SstI GAGCTC 1 cut(s) 1078
StuI AGGCCT 1 cut(s) 697
StyD4I CCNGG 1 cut(s) 1539
StyI CCWWGG 1 cut(s) 1605
TaaI ACNGT 6 cut(s) 193, 406, 421, 826, 836, 1126
TaiI ACGT 3 cut(s) 308, 705, 1034
TaqI TCGA 3 cut(s) 483, 611, 1072
TasI AATT 4 cut(s) 65, 173, 539, 1330
TatI WGTACW 1 cut(s) 45
TfiI GAWTC 1 cut(s) 480
Tru1I TTAA 1 cut(s) 1134
Tru9I TTAA 1 cut(s) 1134
TscAI CASTG 2 cut(s) 196, 1522
TseI GCWGC 2 cut(s) 1523, 1689
TspDTI ATGAA 6 cut(s) 77, 287, 471, 1058, 1326, 1601
TspRI CASTG 2 cut(s) 196, 1522
VneI GTGCAC 1 cut(s) 354
XapI RAATTY 3 cut(s) 173, 539, 1330
XbaI TCTAGA 1 cut(s) 1594
XceI RCATGY 1 cut(s) 1414
XmiI GTMKAC 1 cut(s) 428
XmnI GAANNNNTTC 1 cut(s) 155
XspI CTAG 2 cut(s) 1560, 1595
ZrmI AGTACT 1 cut(s) 47
Zsp2I ATGCAT 1 cut(s) 223
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.