FvH4_4g33330

Ubiquitin carboxyl-terminal hydrolase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb4
OG0014294
Physical Location & Seq
Reverse (-)
31580312 .. 31582934
2623 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_4g33330.t2

Sequence Viewer

Length: 1005 bp
ATGTCTTGGTGTACGATTGAGTCCGACCCCGGGGTCTTTACCGAGCTTATTCAGCAGATGCAAGTAAAAGGTGTGCAGGTTGAGGAGCTGTATTCATTGGACATTGATTCTCTGAACAGTTTGAGACCAGTATATGGTTTGATTTTCCTGTTCAAATGGCGTCCTGGGGAGAAGGATGACCGCCTTGTGATTAAAGATCCAAATCCTAACTTGTTTTTTGCGAGTCAGGTTATTAATAATGCCTGTGCAACCCAAGCAATCTTGTCTATCCTCCTCAACTGTCCGGATGTTGACATTGGTCCTGAACTGTCAAAACTGAAAGAGTTTACAAAGAACTTTCCACCTGAACTGAAAGGATTGGCCATAAACAATAGTGAAGCCATTCGTGCAGCCCACAATAGTTTTGCAAGGCCTGAGCCTTTTGTTCCTGAGGAGCAAAAGGCTGCTGGAAAAGATGATGACGTCTATCATTTTATAAGCTACTTGCCTGTTGATGGGGTCTTGTATGAGCTTGACGGACTGAAGGAGGGACCCATTAGCCTTGGACAGTGCCCTGGTGGGCAAGGTGACATGGAATGGCTGCAGATGGTGCAGCCTGCAATCCAGGAACGGATTGAAAGGTACTCCAAAAGCGAGATAAGATTCAATCTCCTGGCCATTATTAAGAACAGGAAAGAGATGTATACTGTTGAACTTAAGGAGCTCCAAAAGAAGAGGGAGCGCATTTTGCAGCAGCTATCTATCTTACAGTCGGAGAGACCGGATGATGGTAGCAAATTCCAAGCGCTCAACAAAGCCCTTTCAGAAGTAAATGCGGGGATTGAGGGTGCTACCGAGAAGATCTTGATTGAGGAAGAGAAGTTTAAGAAGTGGAGAACAGAAAACATCCGCAGGAAACACAACTATATACCCTTTTTGTTCAACTTCCTCAAGATTTTGGCTGAGAAGAAGCAGCTGAAGCCTCTGATTGAGAAGGCGAAGCAGAAGGCAGGCAACCCTAGGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000228 GO:0000785 GO:0000790 GO:0003674 GO:0003824 GO:0004843 GO:0004857 GO:0004866 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005694 GO:0005737 GO:0005739 GO:0005829 GO:0006464 GO:0006508 GO:0006807 GO:0007275 GO:0008150 GO:0008152 GO:0008233 GO:0008234 GO:0009653 GO:0009892 GO:0009894 GO:0009987 GO:0010016 GO:0010466 GO:0010605 GO:0010951 GO:0016579 GO:0016787 GO:0019222 GO:0019538 GO:0019783 GO:0030162 GO:0030234 GO:0030414 GO:0031011 GO:0031323 GO:0031324 GO:0031329 GO:0031974 GO:0031981 GO:0032268 GO:0032269 GO:0032501 GO:0032502 GO:0032991 GO:0033202 GO:0036211 GO:0036459 GO:0042176 GO:0043086 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043412 GO:0044092 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044444 GO:0044446 GO:0044454 GO:0044464 GO:0044877 GO:0045861 GO:0048367 GO:0048519 GO:0048523 GO:0048731 GO:0048856 GO:0050789 GO:0050790 GO:0050794 GO:0051171 GO:0051172 GO:0051246 GO:0051248 GO:0051336 GO:0051346 GO:0052547 GO:0052548 GO:0060255 GO:0061134 GO:0061135 GO:0061136 GO:0065007 GO:0065009 GO:0070011 GO:0070013 GO:0070603 GO:0070628 GO:0070646 GO:0070647 GO:0071704 GO:0080090 GO:0097346 GO:0098772 GO:0101005 GO:0140096 GO:1901564 GO:1902494 GO:1903050 GO:1903362 GO:1904949
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Peptidase_C12

Protein Analysis

335

Amino Acids

38.23

Weight (kDa)

6.41

Isoelectric Point (pI)

50.63

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Peptidase_C12 PF01088 22 - 225 7.9e-65 Ubiquitin carboxyl-terminal hydrolase, family 1
UCH_C PF18031 295 - 338 7.7e-19 Ubiquitin carboxyl-terminal hydrolases
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0014294)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G65650 AT5G16310
fragaria_vesca FvH4_4g33330 FvH4_4g33330
malus_domestica MD13G1018500.v1.1 MD16G1016200.v1.1
prunus_persica Prupe.1G335400_v2.0.a1 Prupe.1G335400_v2.0.a1
pyrus_communis pycom13g01570 pycom16g01510
rosa_chinensis RchiOBHm_Chr4g0442561
rosa_laevigata RLG00000006002
rosa_multiflora Rmu_ssc0000204.1_g000045
rosa_roxburghii Rroxscaffold_5G00383370
rosa_rugosa Rorug04G0341200
rosa_samantha Rh4AG393600
rosa_wichuraiana Rw4G034010

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 476
AasI GACNNNNNNGTC 1 cut(s) 32
AatII GACGTC 1 cut(s) 465
Acc36I ACCTGC 1 cut(s) 67
AccB7I CCANNNNNTGG 1 cut(s) 134
AccI GTMKAC 1 cut(s) 683
AccIII TCCGGA 1 cut(s) 283
AciI CCGC 3 cut(s) 181, 815, 889
AclWI GGATC 1 cut(s) 191
AcoI YGGCCR 2 cut(s) 360, 654
AcsI RAATTY 1 cut(s) 776
AcuI CTGAAG 2 cut(s) 542, 977
AcyI GRCGYC 2 cut(s) 160, 462
AfaI GTAC 2 cut(s) 13, 623
AfeI AGCGCT 1 cut(s) 786
AfiI CCNNNNNNNGG 4 cut(s) 30, 134, 494, 767
AflII CTTAAG 1 cut(s) 695
AgsI TTSAA 5 cut(s) 154, 617, 646, 692, 922
AjnI CCWGG 4 cut(s) 163, 553, 603, 651
AluBI AGCT 7 cut(s) 46, 88, 480, 511, 703, 736, 955
AluI AGCT 7 cut(s) 46, 88, 480, 511, 703, 736, 955
Alw21I GWGCWC 1 cut(s) 705
Alw26I GTCTC 2 cut(s) 118, 751
AlwI GGATC 1 cut(s) 191
Ama87I CYCGRG 1 cut(s) 29
Aor13HI TCCGGA 1 cut(s) 283
Aor51HI AGCGCT 1 cut(s) 786
AoxI GGCC 3 cut(s) 360, 410, 654
ApeKI GCWGC 7 cut(s) 389, 443, 580, 592, 730, 733, 952
ApoI RAATTY 1 cut(s) 776
AseI ATTAAT 1 cut(s) 234
Asp700I GAANNNNTTC 1 cut(s) 381
AspA2I CCTAGG 1 cut(s) 998
AspLEI GCGC 2 cut(s) 723, 787
AspS9I GGNCC 2 cut(s) 299, 530
AsuC2I CCSGG 2 cut(s) 30, 31
AsuHPI GGTGA 1 cut(s) 578
AvaI CYCGRG 1 cut(s) 29
AvaII GGWCC 2 cut(s) 299, 530
AvrII CCTAGG 1 cut(s) 998
AxyI CCTNAGG 1 cut(s) 429
BaeGI GKGCMC 1 cut(s) 554
BalI TGGCCA 2 cut(s) 362, 656
BanII GRGCYC 1 cut(s) 705
Bbv12I GWGCWC 1 cut(s) 705
BbvI GCAGC 7 cut(s) 401, 430, 567, 604, 742, 745, 964
BccI CCATC 3 cut(s) 488, 580, 761
BciT130I CCWGG 4 cut(s) 165, 555, 605, 653
BcnI CCSGG 2 cut(s) 30, 31
BcoDI GTCTC 2 cut(s) 118, 751
BfaI CTAG 1 cut(s) 999
BfmI CTRYAG 1 cut(s) 581
BfoI RGCGCY 1 cut(s) 788
BfrI CTTAAG 1 cut(s) 695
BfuAI ACCTGC 1 cut(s) 67
BglII AGATCT 1 cut(s) 840
BisI GCNGC 7 cut(s) 390, 444, 581, 593, 731, 734, 953
BlnI CCTAGG 1 cut(s) 998
BlsI GCNGC 7 cut(s) 391, 445, 582, 594, 732, 735, 954
Bme1390I CCNGG 6 cut(s) 30, 31, 165, 555, 605, 653
Bme18I GGWCC 2 cut(s) 299, 530
BmeT110I CYCGRG 1 cut(s) 29
BmgT120I GGNCC 2 cut(s) 299, 530
BmiI GGNNCC 2 cut(s) 531, 532
BmrFI CCNGG 6 cut(s) 30, 31, 165, 555, 605, 653
BmsI GCATC 1 cut(s) 48
BoxI GACNNNNGTC 1 cut(s) 297
Bpu10I CCTNAGC 1 cut(s) 414
BpuEI CTTGAG 1 cut(s) 914
BpuMI CCSGG 2 cut(s) 30, 31
BsaBI GATNNNNATC 1 cut(s) 201
BsaHI GRCGYC 2 cut(s) 160, 462
BsaI GGTCTC 2 cut(s) 118, 751
BsaJI CCNNGG 7 cut(s) 28, 29, 30, 164, 541, 553, 998
BsaWI WCCGGW 2 cut(s) 283, 760
Bsc4I CCNNNNNNNGG 4 cut(s) 30, 134, 494, 767
Bse1I ACTGG 1 cut(s) 128
Bse21I CCTNAGG 1 cut(s) 429
Bse8I GATNNNNATC 1 cut(s) 201
BseAI TCCGGA 1 cut(s) 283
BseBI CCWGG 4 cut(s) 165, 555, 605, 653
BseDI CCNNGG 7 cut(s) 28, 29, 30, 164, 541, 553, 998
BseGI GGATG 4 cut(s) 181, 292, 769, 885
BseJI GATNNNNATC 1 cut(s) 201
BseLI CCNNNNNNNGG 4 cut(s) 30, 134, 494, 767
BseMII CTCAG 3 cut(s) 405, 420, 933
BseNI ACTGG 1 cut(s) 128
BseRI GAGGAG 3 cut(s) 98, 263, 446
BseSI GKGCMC 1 cut(s) 554
BseXI GCAGC 7 cut(s) 401, 430, 567, 604, 742, 745, 964
BsgI GTGCAG 3 cut(s) 95, 408, 611
BshFI GGCC 3 cut(s) 362, 412, 656
BsiHKAI GWGCWC 1 cut(s) 705
BsiHKCI CYCGRG 1 cut(s) 29
BsiSI CCGG 3 cut(s) 30, 284, 761
BslFI GGGAC 1 cut(s) 543
BslI CCNNNNNNNGG 4 cut(s) 30, 134, 494, 767
BsmAI GTCTC 2 cut(s) 118, 751
BsmFI GGGAC 1 cut(s) 543
BsnI GGCC 3 cut(s) 362, 412, 656
Bso31I GGTCTC 2 cut(s) 118, 751
BsoBI CYCGRG 1 cut(s) 29
Bsp1286I GDGCHC 2 cut(s) 554, 705
Bsp13I TCCGGA 1 cut(s) 283
Bsp143I GATC 2 cut(s) 196, 840
BspACI CCGC 3 cut(s) 181, 815, 889
BspANI GGCC 3 cut(s) 362, 412, 656
BspCNI CTCAG 3 cut(s) 406, 421, 934
BspEI TCCGGA 1 cut(s) 283
BspLI GGNNCC 2 cut(s) 531, 532
BspMAI CTGCAG 1 cut(s) 585
BspMI ACCTGC 1 cut(s) 67
BspPI GGATC 1 cut(s) 191
BspTI CTTAAG 1 cut(s) 695
BspTNI GGTCTC 2 cut(s) 118, 751
BsrI ACTGG 1 cut(s) 128
BssECI CCNNGG 7 cut(s) 28, 29, 30, 164, 541, 553, 998
BssMI GATC 2 cut(s) 196, 840
BssNAI GTATAC 1 cut(s) 684
BssNI GRCGYC 2 cut(s) 160, 462
BssT1I CCWWGG 2 cut(s) 541, 998
Bst1107I GTATAC 1 cut(s) 684
Bst2UI CCWGG 4 cut(s) 165, 555, 605, 653
Bst4CI ACNGT 6 cut(s) 119, 281, 309, 549, 688, 750
Bst6I CTCTTC 2 cut(s) 707, 849
BstACI GRCGYC 2 cut(s) 160, 462
BstAFI CTTAAG 1 cut(s) 695
BstAPI GCANNNNNTGC 1 cut(s) 589
BstC8I GCNNGC 2 cut(s) 597, 991
BstDEI CTNAG 3 cut(s) 414, 429, 942
BstF5I GGATG 4 cut(s) 181, 292, 769, 885
BstH2I RGCGCY 1 cut(s) 788
BstHHI GCGC 2 cut(s) 723, 787
BstKTI GATC 2 cut(s) 199, 843
BstMAI GTCTC 2 cut(s) 118, 751
BstMBI GATC 2 cut(s) 196, 840
BstMWI GCNNNNNNNGC 6 cut(s) 52, 254, 386, 589, 727, 958
BstNI CCWGG 4 cut(s) 165, 555, 605, 653
BstPAI GACNNNNGTC 1 cut(s) 297
BstSCI CCNGG 6 cut(s) 28, 29, 163, 553, 603, 651
BstSFI CTRYAG 1 cut(s) 581
BstSLI GKGCMC 1 cut(s) 554
BstV1I GCAGC 7 cut(s) 401, 430, 567, 604, 742, 745, 964
BstX2I RGATCY 2 cut(s) 196, 840
BstYI RGATCY 2 cut(s) 196, 840
BstZ17I GTATAC 1 cut(s) 684
Bsu36I CCTNAGG 1 cut(s) 429
BsuRI GGCC 3 cut(s) 362, 412, 656
BtsCI GGATG 4 cut(s) 181, 292, 769, 885
BtsIMutI CAGTG 1 cut(s) 554
BveI ACCTGC 1 cut(s) 67
Cac8I GCNNGC 2 cut(s) 597, 991
CfoI GCGC 2 cut(s) 723, 787
Cfr13I GGNCC 2 cut(s) 299, 530
Cfr9I CCCGGG 1 cut(s) 29
CseI GACGC 1 cut(s) 149
Csp6I GTAC 2 cut(s) 12, 622
CviAII CATG 1 cut(s) 571
CviQI GTAC 2 cut(s) 12, 622
DdeI CTNAG 3 cut(s) 414, 429, 942
DpnI GATC 2 cut(s) 198, 842
DpnII GATC 2 cut(s) 196, 840
DrdI GACNNNNNNGTC 1 cut(s) 32
DseDI GACNNNNNNGTC 1 cut(s) 32
EaeI YGGCCR 2 cut(s) 360, 654
Eam1104I CTCTTC 2 cut(s) 707, 849
EarI CTCTTC 2 cut(s) 707, 849
Ecl136II GAGCTC 1 cut(s) 703
Eco130I CCWWGG 2 cut(s) 541, 998
Eco147I AGGCCT 1 cut(s) 412
Eco24I GRGCYC 1 cut(s) 705
Eco31I GGTCTC 2 cut(s) 118, 751
Eco47I GGWCC 2 cut(s) 299, 530
Eco47III AGCGCT 1 cut(s) 786
Eco53kI GAGCTC 1 cut(s) 703
Eco57I CTGAAG 2 cut(s) 542, 977
Eco81I CCTNAGG 1 cut(s) 429
Eco88I CYCGRG 1 cut(s) 29
EcoICRI GAGCTC 1 cut(s) 703
EcoO109I RGGNCCY 1 cut(s) 530
EcoRII CCWGG 4 cut(s) 163, 553, 603, 651
EcoT14I CCWWGG 2 cut(s) 541, 998
EcoT38I GRGCYC 1 cut(s) 705
ErhI CCWWGG 2 cut(s) 541, 998
FaeI CATG 1 cut(s) 574
FaiI YATR 9 cut(s) 133, 135, 365, 476, 507, 572, 684, 906, 908
FaqI GGGAC 1 cut(s) 543
FatI CATG 1 cut(s) 570
FauI CCCGC 1 cut(s) 808
FblI GTMKAC 1 cut(s) 683
Fnu4HI GCNGC 7 cut(s) 390, 444, 581, 593, 731, 734, 953
FokI GGATG 4 cut(s) 188, 299, 776, 872
FriOI GRGCYC 1 cut(s) 705
Fsp4HI GCNGC 7 cut(s) 390, 444, 581, 593, 731, 734, 953
FspBI CTAG 1 cut(s) 999
GlaI GCGC 2 cut(s) 722, 786
GluI GCNGC 7 cut(s) 390, 444, 581, 593, 731, 734, 953
HaeII RGCGCY 1 cut(s) 788
HaeIII GGCC 3 cut(s) 362, 412, 656
HapII CCGG 3 cut(s) 30, 284, 761
HgaI GACGC 1 cut(s) 149
HhaI GCGC 2 cut(s) 723, 787
Hin1I GRCGYC 2 cut(s) 160, 462
Hin1II CATG 1 cut(s) 574
Hin6I GCGC 2 cut(s) 721, 785
HinP1I GCGC 2 cut(s) 721, 785
HincII GTYRAC 1 cut(s) 292
HindII GTYRAC 1 cut(s) 292
HinfI GANTC 4 cut(s) 20, 107, 223, 642
HpaII CCGG 3 cut(s) 30, 284, 761
HphI GGTGA 1 cut(s) 578
Hpy166II GTNNAC 4 cut(s) 12, 292, 327, 684
Hpy188I TCNGA 5 cut(s) 25, 114, 754, 805, 966
Hpy188III TCNNGA 5 cut(s) 284, 302, 428, 844, 931
Hpy8I GTNNAC 4 cut(s) 12, 292, 327, 684
HpyAV CCTTC 4 cut(s) 166, 517, 967, 979
HpyCH4III ACNGT 6 cut(s) 119, 281, 309, 549, 688, 750
HpyCH4IV ACGT 1 cut(s) 462
HpyCH4V TGCA 9 cut(s) 61, 76, 248, 389, 407, 583, 592, 599, 730
HpyF10VI GCNNNNNNNGC 6 cut(s) 52, 254, 386, 589, 727, 958
HpyF3I CTNAG 3 cut(s) 414, 429, 942
HpySE526I ACGT 1 cut(s) 462
Hsp92I GRCGYC 2 cut(s) 160, 462
Hsp92II CATG 1 cut(s) 574
HspAI GCGC 2 cut(s) 721, 785
KflI GGGWCCC 1 cut(s) 530
Kpn2I TCCGGA 1 cut(s) 283
Kzo9I GATC 2 cut(s) 196, 840
LmnI GCTCC 5 cut(s) 85, 433, 700, 708, 718
Lsp1109I GCAGC 7 cut(s) 401, 430, 567, 604, 742, 745, 964
LweI GCATC 1 cut(s) 48
MaeI CTAG 1 cut(s) 999
MaeII ACGT 1 cut(s) 462
MaeIII GTNAC 1 cut(s) 566
MalI GATC 2 cut(s) 198, 842
MboI GATC 2 cut(s) 196, 840
MboII GAAGA 4 cut(s) 724, 850, 866, 958
MflI RGATCY 2 cut(s) 196, 840
MhlI GDGCHC 2 cut(s) 554, 705
MlsI TGGCCA 2 cut(s) 362, 656
MluCI AATT 1 cut(s) 776
MluNI TGGCCA 2 cut(s) 362, 656
MlyI GAGTC 2 cut(s) 29, 232
MmeI TCCRAC 2 cut(s) 48, 732
Mox20I TGGCCA 2 cut(s) 362, 656
MroI TCCGGA 1 cut(s) 283
MroXI GAANNNNTTC 1 cut(s) 381
MscI TGGCCA 2 cut(s) 362, 656
MseI TTAA 5 cut(s) 192, 234, 663, 696, 864
Msp20I TGGCCA 2 cut(s) 362, 656
MspA1I CMGCKG 1 cut(s) 955
MspCI CTTAAG 1 cut(s) 695
MspI CCGG 3 cut(s) 30, 284, 761
MspR9I CCNGG 6 cut(s) 30, 31, 165, 555, 605, 653
MvaI CCWGG 4 cut(s) 165, 555, 605, 653
MwoI GCNNNNNNNGC 6 cut(s) 52, 254, 386, 589, 727, 958
NciI CCSGG 2 cut(s) 30, 31
NdeII GATC 2 cut(s) 196, 840
NlaIII CATG 1 cut(s) 574
NlaIV GGNNCC 2 cut(s) 531, 532
NmuCI GTSAC 1 cut(s) 566
PceI AGGCCT 1 cut(s) 412
PdmI GAANNNNTTC 1 cut(s) 381
PfeI GAWTC 2 cut(s) 107, 642
PflMI CCANNNNNTGG 1 cut(s) 134
PfoI TCCNGGA 1 cut(s) 603
PkrI GCNGC 7 cut(s) 391, 445, 582, 594, 732, 735, 954
PleI GAGTC 2 cut(s) 28, 231
PpsI GAGTC 2 cut(s) 28, 231
PpuMI RGGWCCY 1 cut(s) 530
PshAI GACNNNNGTC 1 cut(s) 297
PshBI ATTAAT 1 cut(s) 234
PsiI TTATAA 1 cut(s) 476
Psp124BI GAGCTC 1 cut(s) 705
Psp5II RGGWCCY 1 cut(s) 530
Psp6I CCWGG 4 cut(s) 163, 553, 603, 651
PspGI CCWGG 4 cut(s) 163, 553, 603, 651
PspN4I GGNNCC 2 cut(s) 531, 532
PspPI GGNCC 2 cut(s) 299, 530
PspPPI RGGWCCY 1 cut(s) 530
PstI CTGCAG 1 cut(s) 585
PsuI RGATCY 2 cut(s) 196, 840
PvuII CAGCTG 1 cut(s) 955
RsaI GTAC 2 cut(s) 13, 623
RsaNI GTAC 2 cut(s) 12, 622
SacI GAGCTC 1 cut(s) 705
SaqAI TTAA 5 cut(s) 192, 234, 663, 696, 864
SatI GCNGC 7 cut(s) 390, 444, 581, 593, 731, 734, 953
Sau3AI GATC 2 cut(s) 196, 840
Sau96I GGNCC 2 cut(s) 299, 530
SchI GAGTC 2 cut(s) 29, 232
ScrFI CCNGG 6 cut(s) 30, 31, 165, 555, 605, 653
SduI GDGCHC 2 cut(s) 554, 705
SfaNI GCATC 1 cut(s) 48
SfcI CTRYAG 1 cut(s) 581
SinI GGWCC 2 cut(s) 299, 530
SmaI CCCGGG 1 cut(s) 31
SmlI CTYRAG 2 cut(s) 695, 929
SmoI CTYRAG 2 cut(s) 695, 929
Sse9I AATT 1 cut(s) 776
SseBI AGGCCT 1 cut(s) 412
SsiI CCGC 3 cut(s) 181, 815, 889
SspMI CTAG 1 cut(s) 999
SstI GAGCTC 1 cut(s) 705
StuI AGGCCT 1 cut(s) 412
StyD4I CCNGG 6 cut(s) 28, 29, 163, 553, 603, 651
StyI CCWWGG 2 cut(s) 541, 998
TaaI ACNGT 6 cut(s) 119, 281, 309, 549, 688, 750
TaiI ACGT 1 cut(s) 465
TasI AATT 1 cut(s) 776
TfiI GAWTC 2 cut(s) 107, 642
Tru1I TTAA 5 cut(s) 192, 234, 663, 696, 864
Tru9I TTAA 5 cut(s) 192, 234, 663, 696, 864
TscAI CASTG 1 cut(s) 554
TseFI GTSAC 1 cut(s) 566
TseI GCWGC 7 cut(s) 389, 443, 580, 592, 730, 733, 952
Tsp45I GTSAC 1 cut(s) 566
TspDTI ATGAA 1 cut(s) 84
TspGWI ACGGA 2 cut(s) 531, 625
TspMI CCCGGG 1 cut(s) 29
TspRI CASTG 1 cut(s) 554
Van91I CCANNNNNTGG 1 cut(s) 134
Vha464I CTTAAG 1 cut(s) 695
VpaK11BI GGWCC 2 cut(s) 299, 530
VspI ATTAAT 1 cut(s) 234
XapI RAATTY 1 cut(s) 776
XmaI CCCGGG 1 cut(s) 29
XmaJI CCTAGG 1 cut(s) 998
XmiI GTMKAC 1 cut(s) 683
XmnI GAANNNNTTC 1 cut(s) 381
XspI CTAG 1 cut(s) 999
ZraI GACGTC 1 cut(s) 463
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.