Ubiquitin carboxyl-terminal hydrolase
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G65650 AT5G16310 |
| fragaria_vesca | FvH4_4g33330 FvH4_4g33330 |
| malus_domestica | MD13G1018500.v1.1 MD16G1016200.v1.1 |
| prunus_persica | Prupe.1G335400_v2.0.a1 Prupe.1G335400_v2.0.a1 |
| pyrus_communis | pycom13g01570 pycom16g01510 |
| rosa_chinensis | RchiOBHm_Chr4g0442561 |
| rosa_laevigata | RLG00000006002 |
| rosa_multiflora | Rmu_ssc0000204.1_g000045 |
| rosa_roxburghii | Rroxscaffold_5G00383370 |
| rosa_rugosa | Rorug04G0341200 |
| rosa_samantha | Rh4AG393600 |
| rosa_wichuraiana | Rw4G034010 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 476 |
| Acc36I | ACCTGC | 1 cut(s) | 67 |
| AccI | GTMKAC | 2 cut(s) | 465, 683 |
| AclWI | GGATC | 3 cut(s) | 191, 204, 827 |
| AcoI | YGGCCR | 2 cut(s) | 654, 762 |
| AcsI | RAATTY | 3 cut(s) | 334, 776, 860 |
| AcuI | CTGAAG | 1 cut(s) | 977 |
| AcyI | GRCGYC | 1 cut(s) | 160 |
| AfaI | GTAC | 1 cut(s) | 591 |
| AfeI | AGCGCT | 1 cut(s) | 786 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 30, 134, 494 |
| AflII | CTTAAG | 1 cut(s) | 695 |
| AgsI | TTSAA | 5 cut(s) | 154, 523, 617, 646, 782 |
| AjnI | CCWGG | 5 cut(s) | 28, 163, 225, 553, 603 |
| AluBI | AGCT | 5 cut(s) | 446, 480, 511, 736, 955 |
| AluI | AGCT | 5 cut(s) | 446, 480, 511, 736, 955 |
| Alw21I | GWGCWC | 1 cut(s) | 14 |
| Alw26I | GTCTC | 1 cut(s) | 751 |
| Alw44I | GTGCAC | 1 cut(s) | 10 |
| AlwI | GGATC | 3 cut(s) | 191, 204, 827 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 736 |
| Aor51HI | AGCGCT | 1 cut(s) | 786 |
| AoxI | GGCC | 5 cut(s) | 125, 410, 530, 654, 762 |
| ApaLI | GTGCAC | 1 cut(s) | 10 |
| ApeKI | GCWGC | 5 cut(s) | 389, 580, 730, 733, 952 |
| ApoI | RAATTY | 3 cut(s) | 334, 776, 860 |
| AseI | ATTAAT | 2 cut(s) | 234, 810 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 48, 885 |
| AspLEI | GCGC | 3 cut(s) | 612, 787, 830 |
| AspS9I | GGNCC | 4 cut(s) | 100, 299, 499, 530 |
| AsuHPI | GGTGA | 1 cut(s) | 578 |
| AvaII | GGWCC | 3 cut(s) | 100, 299, 499 |
| AxyI | CCTNAGG | 1 cut(s) | 429 |
| BaeGI | GKGCMC | 2 cut(s) | 14, 554 |
| BalI | TGGCCA | 1 cut(s) | 656 |
| BamHI | GGATCC | 1 cut(s) | 196 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 887, 919 |
| Bbv12I | GWGCWC | 1 cut(s) | 14 |
| BbvI | GCAGC | 5 cut(s) | 401, 567, 742, 745, 964 |
| BccI | CCATC | 4 cut(s) | 488, 509, 580, 841 |
| BceAI | ACGGC | 1 cut(s) | 403 |
| BciT130I | CCWGG | 5 cut(s) | 30, 165, 227, 555, 605 |
| BcoDI | GTCTC | 1 cut(s) | 751 |
| BfaI | CTAG | 1 cut(s) | 999 |
| BfmI | CTRYAG | 1 cut(s) | 581 |
| BfoI | RGCGCY | 2 cut(s) | 788, 831 |
| BfrI | CTTAAG | 1 cut(s) | 695 |
| BfuAI | ACCTGC | 1 cut(s) | 67 |
| BglII | AGATCT | 1 cut(s) | 840 |
| BisI | GCNGC | 5 cut(s) | 390, 581, 731, 734, 953 |
| BlsI | GCNGC | 5 cut(s) | 391, 582, 732, 735, 954 |
| Bme1390I | CCNGG | 5 cut(s) | 30, 165, 227, 555, 605 |
| Bme18I | GGWCC | 3 cut(s) | 100, 299, 499 |
| BmgT120I | GGNCC | 4 cut(s) | 100, 299, 499, 530 |
| BmiI | GGNNCC | 3 cut(s) | 198, 500, 531 |
| BmrFI | CCNGG | 5 cut(s) | 30, 165, 227, 555, 605 |
| BmsI | GCATC | 1 cut(s) | 48 |
| BoxI | GACNNNNGTC | 1 cut(s) | 297 |
| Bpu10I | CCTNAGC | 1 cut(s) | 414 |
| BpuEI | CTTGAG | 1 cut(s) | 914 |
| BsaBI | GATNNNNATC | 1 cut(s) | 201 |
| BsaHI | GRCGYC | 1 cut(s) | 160 |
| BsaI | GGTCTC | 1 cut(s) | 751 |
| BsaJI | CCNNGG | 5 cut(s) | 28, 29, 164, 541, 553 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 30, 134, 494 |
| Bse118I | RCCGGY | 2 cut(s) | 127, 760 |
| Bse21I | CCTNAGG | 1 cut(s) | 429 |
| Bse8I | GATNNNNATC | 1 cut(s) | 201 |
| BseBI | CCWGG | 5 cut(s) | 30, 165, 227, 555, 605 |
| BseDI | CCNNGG | 5 cut(s) | 28, 29, 164, 541, 553 |
| BseGI | GGATG | 1 cut(s) | 181 |
| BseJI | GATNNNNATC | 1 cut(s) | 201 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 30, 134, 494 |
| BseMII | CTCAG | 4 cut(s) | 113, 405, 420, 933 |
| BseRI | GAGGAG | 2 cut(s) | 98, 446 |
| BseSI | GKGCMC | 2 cut(s) | 14, 554 |
| BseX3I | CGGCCG | 1 cut(s) | 762 |
| BseXI | GCAGC | 5 cut(s) | 401, 567, 742, 745, 964 |
| BseYI | CCCAGC | 1 cut(s) | 815 |
| BsgI | GTGCAG | 2 cut(s) | 95, 408 |
| Bsh1285I | CGRYCG | 1 cut(s) | 765 |
| BshFI | GGCC | 5 cut(s) | 127, 412, 532, 656, 764 |
| BsiEI | CGRYCG | 1 cut(s) | 765 |
| BsiHKAI | GWGCWC | 1 cut(s) | 14 |
| BsiSI | CCGG | 3 cut(s) | 128, 761, 892 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 30, 134, 494 |
| BsmAI | GTCTC | 1 cut(s) | 751 |
| BsnI | GGCC | 5 cut(s) | 127, 412, 532, 656, 764 |
| Bso31I | GGTCTC | 1 cut(s) | 751 |
| Bsp1286I | GDGCHC | 2 cut(s) | 14, 554 |
| Bsp143I | GATC | 4 cut(s) | 178, 196, 819, 840 |
| BspANI | GGCC | 5 cut(s) | 127, 412, 532, 656, 764 |
| BspCNI | CTCAG | 4 cut(s) | 114, 406, 421, 934 |
| BspHI | TCATGA | 1 cut(s) | 273 |
| BspLI | GGNNCC | 3 cut(s) | 198, 500, 531 |
| BspMAI | CTGCAG | 1 cut(s) | 585 |
| BspMI | ACCTGC | 1 cut(s) | 67 |
| BspPI | GGATC | 3 cut(s) | 191, 204, 827 |
| BspTI | CTTAAG | 1 cut(s) | 695 |
| BspTNI | GGTCTC | 1 cut(s) | 751 |
| BsrFI | RCCGGY | 2 cut(s) | 127, 760 |
| BssAI | RCCGGY | 2 cut(s) | 127, 760 |
| BssECI | CCNNGG | 5 cut(s) | 28, 29, 164, 541, 553 |
| BssMI | GATC | 4 cut(s) | 178, 196, 819, 840 |
| BssNAI | GTATAC | 1 cut(s) | 684 |
| BssNI | GRCGYC | 1 cut(s) | 160 |
| BssT1I | CCWWGG | 1 cut(s) | 541 |
| Bst1107I | GTATAC | 1 cut(s) | 684 |
| Bst2UI | CCWGG | 5 cut(s) | 30, 165, 227, 555, 605 |
| Bst4CI | ACNGT | 4 cut(s) | 281, 309, 549, 770 |
| Bst6I | CTCTTC | 1 cut(s) | 707 |
| BstACI | GRCGYC | 1 cut(s) | 160 |
| BstAFI | CTTAAG | 1 cut(s) | 695 |
| BstC8I | GCNNGC | 3 cut(s) | 74, 223, 360 |
| BstDEI | CTNAG | 4 cut(s) | 122, 414, 429, 942 |
| BstF5I | GGATG | 1 cut(s) | 181 |
| BstH2I | RGCGCY | 2 cut(s) | 788, 831 |
| BstHHI | GCGC | 3 cut(s) | 612, 787, 830 |
| BstKTI | GATC | 4 cut(s) | 181, 199, 822, 843 |
| BstMAI | GTCTC | 1 cut(s) | 751 |
| BstMBI | GATC | 4 cut(s) | 178, 196, 819, 840 |
| BstMCI | CGRYCG | 1 cut(s) | 765 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 254, 386, 727, 958 |
| BstNI | CCWGG | 5 cut(s) | 30, 165, 227, 555, 605 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 297 |
| BstSCI | CCNGG | 5 cut(s) | 28, 163, 225, 553, 603 |
| BstSFI | CTRYAG | 1 cut(s) | 581 |
| BstSLI | GKGCMC | 2 cut(s) | 14, 554 |
| BstV1I | GCAGC | 5 cut(s) | 401, 567, 742, 745, 964 |
| BstX2I | RGATCY | 2 cut(s) | 196, 840 |
| BstYI | RGATCY | 2 cut(s) | 196, 840 |
| BstZ17I | GTATAC | 1 cut(s) | 684 |
| BstZI | CGGCCG | 1 cut(s) | 762 |
| Bsu36I | CCTNAGG | 1 cut(s) | 429 |
| BsuRI | GGCC | 5 cut(s) | 127, 412, 532, 656, 764 |
| BtsCI | GGATG | 1 cut(s) | 181 |
| BtsIMutI | CAGTG | 1 cut(s) | 554 |
| BveI | ACCTGC | 1 cut(s) | 67 |
| Cac8I | GCNNGC | 3 cut(s) | 74, 223, 360 |
| CaiI | CAGNNNCTG | 1 cut(s) | 736 |
| CciI | TCATGA | 1 cut(s) | 273 |
| CfoI | GCGC | 3 cut(s) | 612, 787, 830 |
| Cfr10I | RCCGGY | 2 cut(s) | 127, 760 |
| Cfr13I | GGNCC | 4 cut(s) | 100, 299, 499, 530 |
| CseI | GACGC | 2 cut(s) | 149, 386 |
| Csp6I | GTAC | 1 cut(s) | 590 |
| CviAII | CATG | 2 cut(s) | 274, 571 |
| CviQI | GTAC | 1 cut(s) | 590 |
| DdeI | CTNAG | 4 cut(s) | 122, 414, 429, 942 |
| DpnI | GATC | 4 cut(s) | 180, 198, 821, 842 |
| DpnII | GATC | 4 cut(s) | 178, 196, 819, 840 |
| EaeI | YGGCCR | 2 cut(s) | 654, 762 |
| EagI | CGGCCG | 1 cut(s) | 762 |
| Eam1104I | CTCTTC | 1 cut(s) | 707 |
| EarI | CTCTTC | 1 cut(s) | 707 |
| EclXI | CGGCCG | 1 cut(s) | 762 |
| Eco130I | CCWWGG | 1 cut(s) | 541 |
| Eco147I | AGGCCT | 1 cut(s) | 412 |
| Eco31I | GGTCTC | 1 cut(s) | 751 |
| Eco47I | GGWCC | 3 cut(s) | 100, 299, 499 |
| Eco47III | AGCGCT | 1 cut(s) | 786 |
| Eco52I | CGGCCG | 1 cut(s) | 762 |
| Eco57I | CTGAAG | 1 cut(s) | 977 |
| Eco81I | CCTNAGG | 1 cut(s) | 429 |
| EcoO109I | RGGNCCY | 1 cut(s) | 499 |
| EcoRII | CCWGG | 5 cut(s) | 28, 163, 225, 553, 603 |
| EcoT14I | CCWWGG | 1 cut(s) | 541 |
| ErhI | CCWWGG | 1 cut(s) | 541 |
| FaeI | CATG | 2 cut(s) | 277, 574 |
| FaiI | YATR | 9 cut(s) | 135, 275, 396, 476, 507, 572, 659, 684, 908 |
| FatI | CATG | 2 cut(s) | 273, 570 |
| FblI | GTMKAC | 2 cut(s) | 465, 683 |
| Fnu4HI | GCNGC | 5 cut(s) | 390, 581, 731, 734, 953 |
| FokI | GGATG | 1 cut(s) | 188 |
| Fsp4HI | GCNGC | 5 cut(s) | 390, 581, 731, 734, 953 |
| FspBI | CTAG | 1 cut(s) | 999 |
| GlaI | GCGC | 3 cut(s) | 611, 786, 829 |
| GluI | GCNGC | 5 cut(s) | 390, 581, 731, 734, 953 |
| GsaI | CCCAGC | 1 cut(s) | 819 |
| HaeII | RGCGCY | 2 cut(s) | 788, 831 |
| HaeIII | GGCC | 5 cut(s) | 127, 412, 532, 656, 764 |
| HapII | CCGG | 3 cut(s) | 128, 761, 892 |
| HgaI | GACGC | 2 cut(s) | 149, 386 |
| HhaI | GCGC | 3 cut(s) | 612, 787, 830 |
| Hin1I | GRCGYC | 1 cut(s) | 160 |
| Hin1II | CATG | 2 cut(s) | 277, 574 |
| Hin6I | GCGC | 3 cut(s) | 610, 785, 828 |
| HinP1I | GCGC | 3 cut(s) | 610, 785, 828 |
| HincII | GTYRAC | 1 cut(s) | 292 |
| HindII | GTYRAC | 1 cut(s) | 292 |
| HinfI | GANTC | 4 cut(s) | 20, 107, 642, 934 |
| HpaII | CCGG | 3 cut(s) | 128, 761, 892 |
| HphI | GGTGA | 1 cut(s) | 578 |
| Hpy166II | GTNNAC | 6 cut(s) | 12, 39, 292, 327, 466, 684 |
| Hpy188I | TCNGA | 5 cut(s) | 25, 114, 123, 754, 805 |
| Hpy188III | TCNNGA | 6 cut(s) | 274, 284, 302, 428, 844, 931 |
| Hpy8I | GTNNAC | 6 cut(s) | 12, 39, 292, 327, 466, 684 |
| Hpy99I | CGWCG | 1 cut(s) | 380 |
| HpyAV | CCTTC | 3 cut(s) | 433, 517, 967 |
| HpyCH4III | ACNGT | 4 cut(s) | 281, 309, 549, 770 |
| HpyCH4V | TGCA | 8 cut(s) | 12, 61, 76, 221, 389, 407, 583, 730 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 254, 386, 727, 958 |
| HpyF3I | CTNAG | 4 cut(s) | 122, 414, 429, 942 |
| Hsp92I | GRCGYC | 1 cut(s) | 160 |
| Hsp92II | CATG | 2 cut(s) | 277, 574 |
| HspAI | GCGC | 3 cut(s) | 610, 785, 828 |
| Kzo9I | GATC | 4 cut(s) | 178, 196, 819, 840 |
| LmnI | GCTCC | 3 cut(s) | 433, 607, 718 |
| Lsp1109I | GCAGC | 5 cut(s) | 401, 567, 742, 745, 964 |
| LweI | GCATC | 1 cut(s) | 48 |
| MaeI | CTAG | 1 cut(s) | 999 |
| MaeIII | GTNAC | 1 cut(s) | 566 |
| MalI | GATC | 4 cut(s) | 180, 198, 821, 842 |
| MboI | GATC | 4 cut(s) | 178, 196, 819, 840 |
| MboII | GAAGA | 5 cut(s) | 724, 850, 863, 866, 958 |
| MflI | RGATCY | 2 cut(s) | 196, 840 |
| MhlI | GDGCHC | 2 cut(s) | 14, 554 |
| MlsI | TGGCCA | 1 cut(s) | 656 |
| MluCI | AATT | 6 cut(s) | 189, 208, 334, 776, 807, 860 |
| MluNI | TGGCCA | 1 cut(s) | 656 |
| MlyI | GAGTC | 1 cut(s) | 29 |
| MmeI | TCCRAC | 1 cut(s) | 48 |
| Mox20I | TGGCCA | 1 cut(s) | 656 |
| MroXI | GAANNNNTTC | 2 cut(s) | 48, 885 |
| MscI | TGGCCA | 1 cut(s) | 656 |
| MseI | TTAA | 6 cut(s) | 192, 234, 696, 810, 864, 921 |
| Msp20I | TGGCCA | 1 cut(s) | 656 |
| MspA1I | CMGCKG | 2 cut(s) | 736, 955 |
| MspCI | CTTAAG | 1 cut(s) | 695 |
| MspI | CCGG | 3 cut(s) | 128, 761, 892 |
| MspR9I | CCNGG | 5 cut(s) | 30, 165, 227, 555, 605 |
| MvaI | CCWGG | 5 cut(s) | 30, 165, 227, 555, 605 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 254, 386, 727, 958 |
| NdeII | GATC | 4 cut(s) | 178, 196, 819, 840 |
| NlaIII | CATG | 2 cut(s) | 277, 574 |
| NlaIV | GGNNCC | 3 cut(s) | 198, 500, 531 |
| NmuCI | GTSAC | 1 cut(s) | 566 |
| PagI | TCATGA | 1 cut(s) | 273 |
| PasI | CCCWGGG | 1 cut(s) | 29 |
| PceI | AGGCCT | 1 cut(s) | 412 |
| PdmI | GAANNNNTTC | 2 cut(s) | 48, 885 |
| PfeI | GAWTC | 3 cut(s) | 107, 642, 934 |
| PflFI | GACNNNGTC | 1 cut(s) | 461 |
| PfoI | TCCNGGA | 1 cut(s) | 603 |
| PkrI | GCNGC | 5 cut(s) | 391, 582, 732, 735, 954 |
| PleI | GAGTC | 1 cut(s) | 28 |
| PpsI | GAGTC | 1 cut(s) | 28 |
| PpuMI | RGGWCCY | 1 cut(s) | 499 |
| PshAI | GACNNNNGTC | 1 cut(s) | 297 |
| PshBI | ATTAAT | 2 cut(s) | 234, 810 |
| PsiI | TTATAA | 1 cut(s) | 476 |
| Psp5II | RGGWCCY | 1 cut(s) | 499 |
| Psp6I | CCWGG | 5 cut(s) | 28, 163, 225, 553, 603 |
| PspFI | CCCAGC | 1 cut(s) | 815 |
| PspGI | CCWGG | 5 cut(s) | 28, 163, 225, 553, 603 |
| PspN4I | GGNNCC | 3 cut(s) | 198, 500, 531 |
| PspPI | GGNCC | 4 cut(s) | 100, 299, 499, 530 |
| PspPPI | RGGWCCY | 1 cut(s) | 499 |
| PstI | CTGCAG | 1 cut(s) | 585 |
| PstNI | CAGNNNCTG | 1 cut(s) | 736 |
| PsuI | RGATCY | 2 cut(s) | 196, 840 |
| PsyI | GACNNNGTC | 1 cut(s) | 461 |
| PvuII | CAGCTG | 2 cut(s) | 736, 955 |
| RsaI | GTAC | 1 cut(s) | 591 |
| RsaNI | GTAC | 1 cut(s) | 590 |
| SaqAI | TTAA | 6 cut(s) | 192, 234, 696, 810, 864, 921 |
| SatI | GCNGC | 5 cut(s) | 390, 581, 731, 734, 953 |
| Sau3AI | GATC | 4 cut(s) | 178, 196, 819, 840 |
| Sau96I | GGNCC | 4 cut(s) | 100, 299, 499, 530 |
| SchI | GAGTC | 1 cut(s) | 29 |
| ScrFI | CCNGG | 5 cut(s) | 30, 165, 227, 555, 605 |
| SduI | GDGCHC | 2 cut(s) | 14, 554 |
| SfaNI | GCATC | 1 cut(s) | 48 |
| SfcI | CTRYAG | 1 cut(s) | 581 |
| SinI | GGWCC | 3 cut(s) | 100, 299, 499 |
| SmlI | CTYRAG | 2 cut(s) | 695, 929 |
| SmoI | CTYRAG | 2 cut(s) | 695, 929 |
| Sse9I | AATT | 6 cut(s) | 189, 208, 334, 776, 807, 860 |
| SseBI | AGGCCT | 1 cut(s) | 412 |
| SspI | AATATT | 1 cut(s) | 886 |
| SspMI | CTAG | 1 cut(s) | 999 |
| StuI | AGGCCT | 1 cut(s) | 412 |
| StyD4I | CCNGG | 5 cut(s) | 28, 163, 225, 553, 603 |
| StyI | CCWWGG | 1 cut(s) | 541 |
| TaaI | ACNGT | 4 cut(s) | 281, 309, 549, 770 |
| TaqI | TCGA | 1 cut(s) | 822 |
| TasI | AATT | 6 cut(s) | 189, 208, 334, 776, 807, 860 |
| TfiI | GAWTC | 3 cut(s) | 107, 642, 934 |
| Tru1I | TTAA | 6 cut(s) | 192, 234, 696, 810, 864, 921 |
| Tru9I | TTAA | 6 cut(s) | 192, 234, 696, 810, 864, 921 |
| TscAI | CASTG | 1 cut(s) | 554 |
| TseFI | GTSAC | 1 cut(s) | 566 |
| TseI | GCWGC | 5 cut(s) | 389, 580, 730, 733, 952 |
| Tsp45I | GTSAC | 1 cut(s) | 566 |
| TspDTI | ATGAA | 2 cut(s) | 84, 290 |
| TspGWI | ACGGA | 1 cut(s) | 374 |
| TspRI | CASTG | 1 cut(s) | 554 |
| Tth111I | GACNNNGTC | 1 cut(s) | 461 |
| Vha464I | CTTAAG | 1 cut(s) | 695 |
| VneI | GTGCAC | 1 cut(s) | 10 |
| VpaK11BI | GGWCC | 3 cut(s) | 100, 299, 499 |
| VspI | ATTAAT | 2 cut(s) | 234, 810 |
| XapI | RAATTY | 3 cut(s) | 334, 776, 860 |
| XmiI | GTMKAC | 2 cut(s) | 465, 683 |
| XmnI | GAANNNNTTC | 2 cut(s) | 48, 885 |
| XspI | CTAG | 1 cut(s) | 999 |