FvH4_4g37250
ERF Family

Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N- methyltransferase family

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb4
Physical Location & Seq
Forward (+)
33796484 .. 33801262
4779 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_4g37250.t1

Sequence Viewer

Length: 1242 bp
ATGAACTCGTCGAACCCACCCGCATACAGTAACGGCTACTGTCCACAGCCGCAGCCGCAGCACCAGCAAGGAATGAACAGAATTCGCCGGGGACCACGTGGAAGGTCACGTGACAGTGACATTAGGGTTTCTGAGGCCGCTCCCAAGCAGCAGCAGCAGCCGGACCAACCTTGCACCGACTTCGACATGGCCTATTTCCACTCCTACGCGCACGTCGGCATCCACGAAGAGATGATCAAGGATCGTGTACGCACCGAAACTTATAGGGCAGCTATTATGCAGCACCAGAGTTCTATAGCCGGCAAAGTGGTAGTCGACGTCGGCTGTGGCACCGGAATTCTTTCTATCTTTTGTGCTCAAGCTGGTGCCAAACGTGTCTATGCTGTTGATGCTAGTGACATTGCTGTGCAGGCAAATGAAGTTGTAAAAGCAAACAATCTATCTGATACGATCATCGTACTACATGGGCGAGTTGAGGATGTTCATATTGATGAGGAGGTTGATGTTATAATTTCAGAGTGGATGGGCTACATGCTTCTGTATGAGAGTATGCTCGGAAGTGTCATTACAGCCAGAGATCGCTGGCTAAAGCCCGGAGGTCTTATACTTCCTTCAAATGCAACGTTGTACATAGCACCTATCACACATGCTGATAGATACAGTGAAAGCATTGATTTCTGGCGCAATGTTTATGGAATTGATATGTCTGCCATGTTACCACTGGCAAAACAATGTGCATTTGAAGAGCCATGTGTTGAGACAATTGTGGGTGAGAATGTTTTAACATGGCCACATGTGGTTAAGCATGTGGACTGCCATAAAATTTCACTTCATGAGCTTGAATCTGTTTCAACAAGCTATAAGTTCAAATCAATGATGCGAGCTCCACTACATGGGTTTGCATTTTGGTTTGACGTCGAATTTAATGGACCTGCAATACTTCTCACAAATAATCATGCACCATCCCAAGTTCCTAACAATCATACAGTGGAGGGTCAGCAGAGGAGGAAACGGGCAAATCCAAGTAATGCATTGGTGCTCTCGACTGCACCTGAGGACCCCCCAACGCATTGGCAACAGACTGTGCTATACTTTTATGACCCAATAGAGGTTGAGCAAGATCAAGTGATTGAAGGTTCTGTTACATTATCACAAAGCAAAGAAAATCGTCGGTTCATGAATATCCATCTCGAATATGCCTCCGGTGGAAGATCCTTTGTCAAAGAGTCAGTGATGAGGTGA

Protein Analysis

414

Amino Acids

46.49

Weight (kDa)

5.93

Isoelectric Point (pI)

49.42

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Methyltransf_9 PF08003 81 - 205 6.8e-07 Protein of unknown function (DUF1698)
TRM5-TYW2_MTfase PF02475 89 - 178 1.3e-07 TRM5/TYW2 methyltransferase domain
TehB PF03848 89 - 203 1.1e-06 Tellurite resistance protein TehB
MTS PF05175 94 - 172 3.6e-08 Methyltransferase small domain
Methyltransf_23 PF13489 99 - 206 1.5e-06 Methyltransferase domain
PrmA PF06325 100 - 173 2e-13 Ribosomal protein L11 methyltransferase (PrmA)
Methyltransf_31 PF13847 101 - 205 6.7e-07 Methyltransferase domain
Methyltransf_25 PF13649 104 - 200 1.1e-11 Methyltransferase domain
Methyltransf_11 PF08241 105 - 202 5.2e-10 Methyltransferase domain
PRMT_C PF22528 206 - 311 8.5e-21 Arginine methyltransferase oligomerization subdomain
PRMT_C PF22528 343 - 401 1.8e-15 Arginine methyltransferase oligomerization subdomain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 509
AatII GACGTC 2 cut(s) 321, 918
Acc36I ACCTGC 1 cut(s) 940
AccB1I GGYRCC 2 cut(s) 329, 365
AccB7I CCANNNNNTGG 1 cut(s) 893
AccBSI CCGCTC 1 cut(s) 140
AccI GTMKAC 1 cut(s) 315
AccII CGCG 1 cut(s) 209
AciI CCGC 4 cut(s) 21, 50, 56, 138
AclI AACGTT 1 cut(s) 623
AclWI GGATC 2 cut(s) 249, 1206
AcoI YGGCCR 1 cut(s) 788
AcsI RAATTY 4 cut(s) 81, 336, 822, 920
AcvI CACGTG 2 cut(s) 98, 110
AcyI GRCGYC 2 cut(s) 318, 915
AfaI GTAC 3 cut(s) 249, 459, 629
AfiI CCNNNNNNNGG 2 cut(s) 893, 1108
AflIII ACRYGT 2 cut(s) 373, 793
AgsI TTSAA 6 cut(s) 615, 743, 842, 852, 868, 1133
AjiI CACGTC 1 cut(s) 214
AluBI AGCT 5 cut(s) 272, 362, 838, 858, 884
AluI AGCT 5 cut(s) 272, 362, 838, 858, 884
Alw21I GWGCWC 3 cut(s) 358, 886, 1041
Alw26I GTCTC 1 cut(s) 752
AlwI GGATC 2 cut(s) 249, 1206
AoxI GGCC 3 cut(s) 135, 189, 788
ApeKI GCWGC 8 cut(s) 52, 58, 148, 151, 154, 157, 269, 280
ApoI RAATTY 4 cut(s) 81, 336, 822, 920
ArsI GACNNNNNNTTYG 2 cut(s) 297, 329
Asp700I GAANNNNTTC 1 cut(s) 340
AspLEI GCGC 2 cut(s) 211, 684
AspS9I GGNCC 4 cut(s) 92, 163, 929, 1057
AsuC2I CCSGG 2 cut(s) 89, 594
AsuHPI GGTGA 1 cut(s) 782
AvaII GGWCC 4 cut(s) 92, 163, 929, 1057
AxyI CCTNAGG 1 cut(s) 1053
BalI TGGCCA 1 cut(s) 790
BanI GGYRCC 2 cut(s) 329, 365
BanII GRGCYC 1 cut(s) 886
BarI GAAGNNNNNNTAC 2 cut(s) 550, 582
BbrPI CACGTG 2 cut(s) 98, 110
Bbv12I GWGCWC 3 cut(s) 358, 886, 1041
BbvI GCAGC 8 cut(s) 64, 70, 160, 163, 166, 169, 281, 292
BccI CCATC 3 cut(s) 517, 970, 1194
BceAI ACGGC 1 cut(s) 49
BcgI CGANNNNNNTGC 2 cut(s) 163, 197
BclI TGATCA 1 cut(s) 234
BcnI CCSGG 2 cut(s) 89, 594
BcoDI GTCTC 1 cut(s) 752
BfaI CTAG 1 cut(s) 393
BfmI CTRYAG 1 cut(s) 294
BfuAI ACCTGC 1 cut(s) 940
Bme1390I CCNGG 2 cut(s) 89, 594
Bme18I GGWCC 4 cut(s) 92, 163, 929, 1057
BmgBI CACGTC 1 cut(s) 214
BmgT120I GGNCC 4 cut(s) 92, 163, 929, 1057
BmiI GGNNCC 4 cut(s) 93, 331, 367, 1059
BmrFI CCNGG 2 cut(s) 89, 594
BmsI GCATC 3 cut(s) 228, 379, 867
BpuEI CTTGAG 1 cut(s) 342
BpuMI CCSGG 2 cut(s) 89, 594
BsaAI YACGTR 2 cut(s) 98, 110
BsaHI GRCGYC 2 cut(s) 318, 915
BsaJI CCNNGG 1 cut(s) 88
BsaWI WCCGGW 2 cut(s) 332, 1202
Bsc4I CCNNNNNNNGG 2 cut(s) 893, 1108
Bse118I RCCGGY 1 cut(s) 299
Bse1I ACTGG 1 cut(s) 726
Bse21I CCTNAGG 1 cut(s) 1053
Bse3DI GCAATG 2 cut(s) 399, 691
BseDI CCNNGG 1 cut(s) 88
BseGI GGATG 4 cut(s) 219, 484, 528, 962
BseLI CCNNNNNNNGG 2 cut(s) 893, 1108
BseMI GCAATG 2 cut(s) 399, 691
BseMII CTCAG 2 cut(s) 123, 1044
BseNI ACTGG 1 cut(s) 726
BseRI GAGGAG 2 cut(s) 509, 1018
BseXI GCAGC 8 cut(s) 64, 70, 160, 163, 166, 169, 281, 292
BsgI GTGCAG 2 cut(s) 428, 1032
Bsh1236I CGCG 1 cut(s) 209
BshFI GGCC 3 cut(s) 137, 191, 790
BshNI GGYRCC 2 cut(s) 329, 365
BsiHKAI GWGCWC 3 cut(s) 358, 886, 1041
BsiSI CCGG 6 cut(s) 88, 161, 300, 333, 594, 1203
BslFI GGGAC 1 cut(s) 105
BslI CCNNNNNNNGG 2 cut(s) 893, 1108
BsmAI GTCTC 1 cut(s) 752
BsmFI GGGAC 1 cut(s) 105
BsnI GGCC 3 cut(s) 137, 191, 790
Bsp1286I GDGCHC 3 cut(s) 358, 886, 1041
Bsp1407I TGTACA 1 cut(s) 627
Bsp143I GATC 6 cut(s) 234, 241, 450, 577, 1120, 1211
BspACI CCGC 4 cut(s) 21, 50, 56, 138
BspANI GGCC 3 cut(s) 137, 191, 790
BspCNI CTCAG 2 cut(s) 124, 1045
BspFNI CGCG 1 cut(s) 209
BspHI TCATGA 2 cut(s) 832, 1176
BspLI GGNNCC 4 cut(s) 93, 331, 367, 1059
BspMI ACCTGC 1 cut(s) 940
BspPI GGATC 2 cut(s) 249, 1206
BspQI GCTCTTC 1 cut(s) 738
BspT107I GGYRCC 2 cut(s) 329, 365
BsrBI CCGCTC 1 cut(s) 140
BsrDI GCAATG 2 cut(s) 399, 691
BsrFI RCCGGY 1 cut(s) 299
BsrGI TGTACA 1 cut(s) 627
BsrI ACTGG 1 cut(s) 726
BssAI RCCGGY 1 cut(s) 299
BssECI CCNNGG 1 cut(s) 88
BssMI GATC 6 cut(s) 234, 241, 450, 577, 1120, 1211
BssNI GRCGYC 2 cut(s) 318, 915
Bst4CI ACNGT 6 cut(s) 29, 41, 116, 662, 988, 1084
Bst6I CTCTTC 2 cut(s) 222, 738
BstACI GRCGYC 2 cut(s) 318, 915
BstAUI TGTACA 1 cut(s) 627
BstBAI YACGTR 2 cut(s) 98, 110
BstC8I GCNNGC 4 cut(s) 301, 411, 584, 882
BstDEI CTNAG 2 cut(s) 132, 1053
BstF5I GGATG 4 cut(s) 219, 484, 528, 962
BstFNI CGCG 1 cut(s) 209
BstHHI GCGC 2 cut(s) 211, 684
BstKTI GATC 6 cut(s) 237, 244, 453, 580, 1123, 1214
BstMAI GTCTC 1 cut(s) 752
BstMBI GATC 6 cut(s) 234, 241, 450, 577, 1120, 1211
BstMWI GCNNNNNNNGC 7 cut(s) 55, 58, 64, 154, 157, 389, 410
BstNSI RCATGY 4 cut(s) 535, 650, 797, 809
BstSCI CCNGG 2 cut(s) 87, 592
BstSFI CTRYAG 1 cut(s) 294
BstUI CGCG 1 cut(s) 209
BstV1I GCAGC 8 cut(s) 64, 70, 160, 163, 166, 169, 281, 292
BstX2I RGATCY 1 cut(s) 1211
BstXI CCANNNNNNTGG 1 cut(s) 1071
BstYI RGATCY 1 cut(s) 1211
Bsu36I CCTNAGG 1 cut(s) 1053
BsuRI GGCC 3 cut(s) 137, 191, 790
BtrI CACGTC 1 cut(s) 214
BtsCI GGATG 4 cut(s) 219, 484, 528, 962
BtsIMutI CAGTG 5 cut(s) 121, 667, 719, 993, 1236
BveI ACCTGC 1 cut(s) 940
Cac8I GCNNGC 4 cut(s) 301, 411, 584, 882
CciI TCATGA 2 cut(s) 832, 1176
CfoI GCGC 2 cut(s) 211, 684
Cfr10I RCCGGY 1 cut(s) 299
Cfr13I GGNCC 4 cut(s) 92, 163, 929, 1057
Csp6I GTAC 3 cut(s) 248, 458, 628
CviQI GTAC 3 cut(s) 248, 458, 628
DdeI CTNAG 2 cut(s) 132, 1053
DpnI GATC 6 cut(s) 236, 243, 452, 579, 1122, 1213
DpnII GATC 6 cut(s) 234, 241, 450, 577, 1120, 1211
EaeI YGGCCR 1 cut(s) 788
Eam1104I CTCTTC 2 cut(s) 222, 738
EarI CTCTTC 2 cut(s) 222, 738
Ecl136II GAGCTC 1 cut(s) 884
Eco24I GRGCYC 1 cut(s) 886
Eco47I GGWCC 4 cut(s) 92, 163, 929, 1057
Eco53kI GAGCTC 1 cut(s) 884
Eco72I CACGTG 2 cut(s) 98, 110
Eco81I CCTNAGG 1 cut(s) 1053
EcoICRI GAGCTC 1 cut(s) 884
EcoO109I RGGNCCY 1 cut(s) 1057
EcoRI GAATTC 2 cut(s) 81, 336
EcoT22I ATGCAT 1 cut(s) 1033
EcoT38I GRGCYC 1 cut(s) 886
FaqI GGGAC 1 cut(s) 105
FauI CCCGC 1 cut(s) 28
FbaI TGATCA 1 cut(s) 234
FblI GTMKAC 1 cut(s) 315
FokI GGATG 4 cut(s) 206, 491, 535, 949
FriOI GRGCYC 1 cut(s) 886
FspBI CTAG 1 cut(s) 393
GlaI GCGC 2 cut(s) 210, 683
HaeIII GGCC 3 cut(s) 137, 191, 790
HapII CCGG 6 cut(s) 88, 161, 300, 333, 594, 1203
HhaI GCGC 2 cut(s) 211, 684
Hin1I GRCGYC 2 cut(s) 318, 915
Hin6I GCGC 2 cut(s) 209, 682
HinP1I GCGC 2 cut(s) 209, 682
HincII GTYRAC 1 cut(s) 316
HindII GTYRAC 1 cut(s) 316
HinfI GANTC 2 cut(s) 842, 1226
HpaII CCGG 6 cut(s) 88, 161, 300, 333, 594, 1203
HphI GGTGA 1 cut(s) 782
Hpy166II GTNNAC 4 cut(s) 44, 248, 316, 811
Hpy188I TCNGA 4 cut(s) 133, 445, 517, 557
Hpy188III TCNNGA 4 cut(s) 833, 1042, 1177, 1190
Hpy8I GTNNAC 4 cut(s) 44, 248, 316, 811
Hpy99I CGWCG 6 cut(s) 13, 218, 320, 323, 920, 1173
HpyAV CCTTC 3 cut(s) 96, 621, 1127
HpyCH4III ACNGT 6 cut(s) 29, 41, 116, 662, 988, 1084
HpyCH4IV ACGT 7 cut(s) 97, 109, 213, 318, 373, 623, 915
HpyF10VI GCNNNNNNNGC 7 cut(s) 55, 58, 64, 154, 157, 389, 410
HpyF3I CTNAG 2 cut(s) 132, 1053
HpySE526I ACGT 7 cut(s) 97, 109, 213, 318, 373, 623, 915
Hsp92I GRCGYC 2 cut(s) 318, 915
HspAI GCGC 2 cut(s) 209, 682
KroI GCCGGC 1 cut(s) 299
KroNI GCCGGC 1 cut(s) 301
Ksp22I TGATCA 1 cut(s) 234
Kzo9I GATC 6 cut(s) 234, 241, 450, 577, 1120, 1211
LguI GCTCTTC 1 cut(s) 738
LmnI GCTCC 2 cut(s) 145, 889
Lsp1109I GCAGC 8 cut(s) 64, 70, 160, 163, 166, 169, 281, 292
LweI GCATC 3 cut(s) 228, 379, 867
MaeI CTAG 1 cut(s) 393
MaeII ACGT 7 cut(s) 97, 109, 213, 318, 373, 623, 915
MaeIII GTNAC 7 cut(s) 29, 105, 110, 116, 395, 714, 1141
MalI GATC 6 cut(s) 236, 243, 452, 579, 1122, 1213
MbiI CCGCTC 1 cut(s) 140
MboI GATC 6 cut(s) 234, 241, 450, 577, 1120, 1211
MboII GAAGA 3 cut(s) 239, 755, 1221
MfeI CAATTG 1 cut(s) 762
MflI RGATCY 1 cut(s) 1211
MhlI GDGCHC 3 cut(s) 358, 886, 1041
MlsI TGGCCA 1 cut(s) 790
MluCI AATT 7 cut(s) 81, 336, 510, 696, 762, 822, 920
MluNI TGGCCA 1 cut(s) 790
MlyI GAGTC 1 cut(s) 1235
Mox20I TGGCCA 1 cut(s) 790
Mph1103I ATGCAT 1 cut(s) 1033
MroNI GCCGGC 1 cut(s) 299
MroXI GAANNNNTTC 1 cut(s) 340
MscI TGGCCA 1 cut(s) 790
MseI TTAA 3 cut(s) 782, 801, 924
MslI CAYNNNNRTG 2 cut(s) 404, 489
Msp20I TGGCCA 1 cut(s) 790
MspI CCGG 6 cut(s) 88, 161, 300, 333, 594, 1203
MspR9I CCNGG 2 cut(s) 89, 594
MunI CAATTG 1 cut(s) 762
MvnI CGCG 1 cut(s) 209
MwoI GCNNNNNNNGC 7 cut(s) 55, 58, 64, 154, 157, 389, 410
NaeI GCCGGC 1 cut(s) 301
NciI CCSGG 2 cut(s) 89, 594
NdeII GATC 6 cut(s) 234, 241, 450, 577, 1120, 1211
NgoMIV GCCGGC 1 cut(s) 299
NlaIV GGNNCC 4 cut(s) 93, 331, 367, 1059
NmuCI GTSAC 4 cut(s) 105, 110, 116, 395
NsiI ATGCAT 1 cut(s) 1033
NspI RCATGY 4 cut(s) 535, 650, 797, 809
PagI TCATGA 2 cut(s) 832, 1176
PciI ACATGT 1 cut(s) 793
PciSI GCTCTTC 1 cut(s) 738
PcsI WCGNNNNNNNCGW 1 cut(s) 222
PdiI GCCGGC 1 cut(s) 301
PdmI GAANNNNTTC 1 cut(s) 340
PfeI GAWTC 1 cut(s) 842
PflMI CCANNNNNTGG 1 cut(s) 893
PleI GAGTC 1 cut(s) 1234
PmaCI CACGTG 2 cut(s) 98, 110
PmlI CACGTG 2 cut(s) 98, 110
PpsI GAGTC 1 cut(s) 1234
Ppu21I YACGTR 2 cut(s) 98, 110
PpuMI RGGWCCY 1 cut(s) 1057
PscI ACATGT 1 cut(s) 793
PsiI TTATAA 1 cut(s) 509
Psp124BI GAGCTC 1 cut(s) 886
Psp1406I AACGTT 1 cut(s) 623
Psp5II RGGWCCY 1 cut(s) 1057
PspCI CACGTG 2 cut(s) 98, 110
PspN4I GGNNCC 4 cut(s) 93, 331, 367, 1059
PspPI GGNCC 4 cut(s) 92, 163, 929, 1057
PspPPI RGGWCCY 1 cut(s) 1057
PsuI RGATCY 1 cut(s) 1211
RsaI GTAC 3 cut(s) 249, 459, 629
RsaNI GTAC 3 cut(s) 248, 458, 628
RseI CAYNNNNRTG 2 cut(s) 404, 489
SacI GAGCTC 1 cut(s) 886
SalI GTCGAC 1 cut(s) 314
SapI GCTCTTC 1 cut(s) 738
SaqAI TTAA 3 cut(s) 782, 801, 924
Sau3AI GATC 6 cut(s) 234, 241, 450, 577, 1120, 1211
Sau96I GGNCC 4 cut(s) 92, 163, 929, 1057
SchI GAGTC 1 cut(s) 1235
ScrFI CCNGG 2 cut(s) 89, 594
SduI GDGCHC 3 cut(s) 358, 886, 1041
SfaNI GCATC 3 cut(s) 228, 379, 867
SfcI CTRYAG 1 cut(s) 294
SinI GGWCC 4 cut(s) 92, 163, 929, 1057
SmiMI CAYNNNNRTG 2 cut(s) 404, 489
SmlI CTYRAG 1 cut(s) 357
SmoI CTYRAG 1 cut(s) 357
Sse9I AATT 7 cut(s) 81, 336, 510, 696, 762, 822, 920
SsiI CCGC 4 cut(s) 21, 50, 56, 138
SspMI CTAG 1 cut(s) 393
SstI GAGCTC 1 cut(s) 886
StyD4I CCNGG 2 cut(s) 87, 592
TaaI ACNGT 6 cut(s) 29, 41, 116, 662, 988, 1084
TaiI ACGT 7 cut(s) 100, 112, 216, 321, 376, 626, 918
TaqI TCGA 6 cut(s) 11, 183, 315, 918, 1043, 1191
TasI AATT 7 cut(s) 81, 336, 510, 696, 762, 822, 920
TatI WGTACW 1 cut(s) 627
TauI GCSGC 3 cut(s) 52, 58, 140
TfiI GAWTC 1 cut(s) 842
Tru1I TTAA 3 cut(s) 782, 801, 924
Tru9I TTAA 3 cut(s) 782, 801, 924
TscAI CASTG 5 cut(s) 121, 667, 726, 993, 1236
TseFI GTSAC 4 cut(s) 105, 110, 116, 395
TseI GCWGC 8 cut(s) 52, 58, 148, 151, 154, 157, 269, 280
Tsp45I GTSAC 4 cut(s) 105, 110, 116, 395
TspDTI ATGAA 7 cut(s) 17, 89, 432, 473, 821, 1165, 1193
TspRI CASTG 5 cut(s) 121, 667, 726, 993, 1236
Van91I CCANNNNNTGG 1 cut(s) 893
VpaK11BI GGWCC 4 cut(s) 92, 163, 929, 1057
XapI RAATTY 4 cut(s) 81, 336, 822, 920
XceI RCATGY 4 cut(s) 535, 650, 797, 809
XcmI CCANNNNNNNNNTGG 1 cut(s) 718
XmiI GTMKAC 1 cut(s) 315
XmnI GAANNNNTTC 1 cut(s) 340
XspI CTAG 1 cut(s) 393
ZraI GACGTC 2 cut(s) 319, 916
Zsp2I ATGCAT 1 cut(s) 1033
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.