pycom13g00190
ERF Family

Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N- methyltransferase family

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr13
Physical Location & Seq
Reverse (-)
121248 .. 126378
5131 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom13g00190.13

Sequence Viewer

Length: 1431 bp
ATGCCAATAACAAAGGGGAAAAAAAAAAAAAAAAAAAAAACCAATTTTGCAAAATGCAAAACGTCAAACGGCGCTTTCATTTTGGTCTCTCGAAATATTGGGGTTTGGGAGTGTGAGCGAGCGAGCGCGAGCAAGCGAGTTGTCACCAAAACTATGAACTCGACCCCGGCTTACAGTAACGGCTACCAGCAGCAGCAGCAACAACAACCACACGGGATGAGCCAGAGGGATAGAGTTCGCCGGGGAACACGTGCGAGGTCACGTGAGCTCAGAGACAACTTCGGCAGTGGTGGTAATTTTGGCGGGCTTAGGGTTTCTGAGCACAATAAGCAGCAGCAACAACAACAGGGAGCGCCTTGTACGGACTTCGACATGGCCTATTTCCACTCCTACGCGCACGTTGGCATCCACGAAGAAATGATCAAGGACCGTGTACGCACTGAATCTTATAGGGCGGCAATCATGCAGCACCAGAGCTCTATAGCAGGCAAAGTTGTAGTGGATGTTGGCTGCGGCACAGGCATTCTTTCTATATTTTGTGCTCAGGCTGGTGCAAAACGTGTATATGCTGTTGATGCAAGTGACATTGCAGTGCAGGCAAATGAAGTTGTGAAAGCAAACAATCTATCTGAAACTGTCATCGTACTACATGGGCGAGTTGAGGATGTCAATATTGATGAGGAGGTTGATGTTATAATTTCAGAATGGATGGGCTACATGCTTCTGTATGAGAGTATGCTGGGAAGTGTGATCACAGCAAGAGATCGCTGGCTAAAACCTGGAGGTCTAATACTTCCTTCAAGTGCAACGTTGTACATGGCACCTATCACACATTCTGATAGATACAGTGAAAGCATAGATTTCTGGCGCAATGTTTATGGAATTGACATGTCTGCCATGTTGCCATTGGCAAAACAATGTGCGTTTGAAGAGCCATCTGTTGAGACGATTGTGGGTGAGAATGTTTTGACATGGCCACATGTGGTTAAGCATGTGGATTGCCATACAGTTACACATCATGAGTTAGAATCTGTTACGGCAAACTACAAGTTCAAGTCAATGATGCGAGCTCCACTACATGGGTTTGCATTTTGGTTTGATGTCGAATTCAGTGGACCTACGTTAGCTCCTACAAATAATCAGGCACCATCCTTGCTTTTTAACAATCTTCCAGTGGAGGGTCAGCAGAGGAAGAAACGAGCAAATCCCAACGAAGCATTGGTTCTGTCCACTGCACCTGAGGACCCTCCAACGCATTGGCAACAGACTGTGCTGTACTTCTATGAGCCAATTGAGCTGGAGCAAGATCAACTCATTGAAGGTTCTGTAACACTATCACAAAGCAAGGAAAACCGTCGATTCATGAATATCCACCTTGAATATGCCTCAGGTGGAAGATCCTTTGTAAAAGAATCTGTAATGAGACCTTGA

Protein Analysis

477

Amino Acids

53.52

Weight (kDa)

8.34

Isoelectric Point (pI)

49.91

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 695
AccB1I GGYRCC 2 cut(s) 820, 1144
AccB7I CCANNNNNTGG 1 cut(s) 1079
AccII CGCG 2 cut(s) 128, 395
AciI CCGC 3 cut(s) 303, 455, 513
AclI AACGTT 1 cut(s) 809
AclWI GGATC 1 cut(s) 1392
AcoI YGGCCR 1 cut(s) 974
AcsI RAATTY 1 cut(s) 1106
AcvI CACGTG 2 cut(s) 251, 263
AfaI GTAC 5 cut(s) 361, 435, 645, 815, 1277
AfiI CCNNNNNNNGG 2 cut(s) 1079, 1178
AflIII ACRYGT 4 cut(s) 248, 559, 888, 979
AgsI TTSAA 5 cut(s) 801, 929, 1054, 1319, 1379
AjnI CCWGG 1 cut(s) 778
AluBI AGCT 5 cut(s) 268, 477, 1070, 1127, 1297
AluI AGCT 5 cut(s) 268, 477, 1070, 1127, 1297
Alw21I GWGCWC 5 cut(s) 270, 324, 479, 544, 1072
Alw26I GTCTC 4 cut(s) 91, 267, 938, 1417
AlwI GGATC 1 cut(s) 1392
AoxI GGCC 2 cut(s) 375, 974
ApeKI GCWGC 7 cut(s) 190, 193, 196, 331, 334, 466, 510
ApoI RAATTY 1 cut(s) 1106
AspLEI GCGC 5 cut(s) 74, 128, 355, 397, 870
AspS9I GGNCC 3 cut(s) 427, 1115, 1243
AsuC2I CCSGG 2 cut(s) 167, 242
AsuHPI GGTGA 2 cut(s) 136, 968
AvaII GGWCC 3 cut(s) 427, 1115, 1243
AxyI CCTNAGG 2 cut(s) 1239, 1387
BalI TGGCCA 1 cut(s) 976
BanI GGYRCC 2 cut(s) 820, 1144
BanII GRGCYC 3 cut(s) 270, 479, 1072
BbrPI CACGTG 2 cut(s) 251, 263
Bbv12I GWGCWC 5 cut(s) 270, 324, 479, 544, 1072
BbvI GCAGC 7 cut(s) 202, 205, 208, 343, 346, 478, 497
BccI CCATC 3 cut(s) 703, 943, 1156
BceAI ACGGC 3 cut(s) 85, 196, 1053
BciT130I CCWGG 1 cut(s) 780
BclI TGATCA 2 cut(s) 420, 750
BcnI CCSGG 2 cut(s) 167, 242
BcoDI GTCTC 4 cut(s) 91, 267, 938, 1417
BfmI CTRYAG 1 cut(s) 480
BfoI RGCGCY 2 cut(s) 75, 356
BisI GCNGC 9 cut(s) 191, 194, 197, 332, 335, 456, 467, 511, 514
BlsI GCNGC 9 cut(s) 192, 195, 198, 333, 336, 457, 468, 512, 515
Bme1390I CCNGG 3 cut(s) 167, 242, 780
Bme18I GGWCC 3 cut(s) 427, 1115, 1243
BmgT120I GGNCC 3 cut(s) 427, 1115, 1243
BmiI GGNNCC 3 cut(s) 822, 1146, 1245
BmrFI CCNGG 3 cut(s) 167, 242, 780
BmsI GCATC 3 cut(s) 414, 565, 1053
BpmI CTGGAG 2 cut(s) 801, 1319
Bpu10I CCTNAGC 2 cut(s) 308, 543
BpuMI CCSGG 2 cut(s) 167, 242
BsaAI YACGTR 2 cut(s) 251, 263
BsaI GGTCTC 2 cut(s) 91, 1417
BsaJI CCNNGG 2 cut(s) 165, 241
BsaXI ACNNNNNCTCC 2 cut(s) 1111, 1141
Bsc4I CCNNNNNNNGG 2 cut(s) 1079, 1178
Bse1I ACTGG 1 cut(s) 1172
Bse21I CCTNAGG 2 cut(s) 1239, 1387
Bse3DI GCAATG 2 cut(s) 585, 877
BseBI CCWGG 1 cut(s) 780
BseDI CCNNGG 2 cut(s) 165, 241
BseGI GGATG 6 cut(s) 222, 405, 508, 670, 714, 1148
BseLI CCNNNNNNNGG 2 cut(s) 1079, 1178
BseMI GCAATG 2 cut(s) 585, 877
BseMII CTCAG 5 cut(s) 283, 309, 557, 1230, 1401
BseNI ACTGG 1 cut(s) 1172
BseRI GAGGAG 1 cut(s) 695
BseXI GCAGC 7 cut(s) 202, 205, 208, 343, 346, 478, 497
BseYI CCCAGC 1 cut(s) 739
BsgI GTGCAG 2 cut(s) 614, 1218
Bsh1236I CGCG 2 cut(s) 128, 395
BshFI GGCC 2 cut(s) 377, 976
BshNI GGYRCC 2 cut(s) 820, 1144
BsiHKAI GWGCWC 5 cut(s) 270, 324, 479, 544, 1072
BsiSI CCGG 2 cut(s) 167, 241
BslI CCNNNNNNNGG 2 cut(s) 1079, 1178
BsmAI GTCTC 4 cut(s) 91, 267, 938, 1417
BsmBI CGTCTC 1 cut(s) 938
BsmI GAATGC 1 cut(s) 522
BsnI GGCC 2 cut(s) 377, 976
Bso31I GGTCTC 2 cut(s) 91, 1417
Bsp1286I GDGCHC 5 cut(s) 270, 324, 479, 544, 1072
Bsp1407I TGTACA 1 cut(s) 813
Bsp143I GATC 5 cut(s) 420, 750, 763, 1306, 1397
BspACI CCGC 3 cut(s) 303, 455, 513
BspANI GGCC 2 cut(s) 377, 976
BspCNI CTCAG 5 cut(s) 282, 310, 556, 1231, 1400
BspFNI CGCG 2 cut(s) 128, 395
BspHI TCATGA 2 cut(s) 1018, 1362
BspLI GGNNCC 3 cut(s) 822, 1146, 1245
BspPI GGATC 1 cut(s) 1392
BspQI GCTCTTC 1 cut(s) 924
BspT107I GGYRCC 2 cut(s) 820, 1144
BspTNI GGTCTC 2 cut(s) 91, 1417
BsrDI GCAATG 2 cut(s) 585, 877
BsrGI TGTACA 1 cut(s) 813
BsrI ACTGG 1 cut(s) 1172
BssECI CCNNGG 2 cut(s) 165, 241
BssMI GATC 5 cut(s) 420, 750, 763, 1306, 1397
Bst2UI CCWGG 1 cut(s) 780
Bst4CI ACNGT 7 cut(s) 176, 431, 637, 848, 1009, 1270, 1355
Bst6I CTCTTC 1 cut(s) 924
BstAUI TGTACA 1 cut(s) 813
BstBAI YACGTR 2 cut(s) 251, 263
BstC8I GCNNGC 9 cut(s) 120, 124, 130, 134, 305, 487, 597, 770, 1068
BstDEI CTNAG 6 cut(s) 269, 308, 318, 543, 1239, 1387
BstF5I GGATG 6 cut(s) 222, 405, 508, 670, 714, 1148
BstFNI CGCG 2 cut(s) 128, 395
BstH2I RGCGCY 2 cut(s) 75, 356
BstHHI GCGC 5 cut(s) 74, 128, 355, 397, 870
BstKTI GATC 5 cut(s) 423, 753, 766, 1309, 1400
BstMAI GTCTC 4 cut(s) 91, 267, 938, 1417
BstMBI GATC 5 cut(s) 420, 750, 763, 1306, 1397
BstMWI GCNNNNNNNGC 6 cut(s) 196, 328, 519, 575, 596, 1294
BstNI CCWGG 1 cut(s) 780
BstNSI RCATGY 4 cut(s) 721, 892, 983, 995
BstSCI CCNGG 3 cut(s) 165, 240, 778
BstSFI CTRYAG 1 cut(s) 480
BstUI CGCG 2 cut(s) 128, 395
BstV1I GCAGC 7 cut(s) 202, 205, 208, 343, 346, 478, 497
BstX2I RGATCY 1 cut(s) 1397
BstXI CCANNNNNNTGG 1 cut(s) 1257
BstYI RGATCY 1 cut(s) 1397
Bsu36I CCTNAGG 2 cut(s) 1239, 1387
BsuRI GGCC 2 cut(s) 377, 976
BtsCI GGATG 6 cut(s) 222, 405, 508, 670, 714, 1148
BtsI GCAGTG 3 cut(s) 292, 597, 1230
BtsIMutI CAGTG 7 cut(s) 292, 438, 597, 853, 1117, 1179, 1230
Cac8I GCNNGC 9 cut(s) 120, 124, 130, 134, 305, 487, 597, 770, 1068
CciI TCATGA 2 cut(s) 1018, 1362
CfoI GCGC 5 cut(s) 74, 128, 355, 397, 870
Cfr13I GGNCC 3 cut(s) 427, 1115, 1243
Csp6I GTAC 5 cut(s) 360, 434, 644, 814, 1276
CviQI GTAC 5 cut(s) 360, 434, 644, 814, 1276
DdeI CTNAG 6 cut(s) 269, 308, 318, 543, 1239, 1387
DpnI GATC 5 cut(s) 422, 752, 765, 1308, 1399
DpnII GATC 5 cut(s) 420, 750, 763, 1306, 1397
EaeI YGGCCR 1 cut(s) 974
Eam1104I CTCTTC 1 cut(s) 924
EarI CTCTTC 1 cut(s) 924
Ecl136II GAGCTC 3 cut(s) 268, 477, 1070
Eco24I GRGCYC 3 cut(s) 270, 479, 1072
Eco31I GGTCTC 2 cut(s) 91, 1417
Eco47I GGWCC 3 cut(s) 427, 1115, 1243
Eco53kI GAGCTC 3 cut(s) 268, 477, 1070
Eco72I CACGTG 2 cut(s) 251, 263
Eco81I CCTNAGG 2 cut(s) 1239, 1387
EcoICRI GAGCTC 3 cut(s) 268, 477, 1070
EcoO109I RGGNCCY 1 cut(s) 1243
EcoRI GAATTC 1 cut(s) 1106
EcoRII CCWGG 1 cut(s) 778
EcoT38I GRGCYC 3 cut(s) 270, 479, 1072
Esp3I CGTCTC 1 cut(s) 938
FauI CCCGC 1 cut(s) 296
FbaI TGATCA 2 cut(s) 420, 750
Fnu4HI GCNGC 9 cut(s) 191, 194, 197, 332, 335, 456, 467, 511, 514
FokI GGATG 6 cut(s) 229, 392, 515, 677, 721, 1135
FriOI GRGCYC 3 cut(s) 270, 479, 1072
Fsp4HI GCNGC 9 cut(s) 191, 194, 197, 332, 335, 456, 467, 511, 514
GlaI GCGC 5 cut(s) 73, 127, 354, 396, 869
GluI GCNGC 9 cut(s) 191, 194, 197, 332, 335, 456, 467, 511, 514
GsaI CCCAGC 1 cut(s) 743
GsuI CTGGAG 2 cut(s) 801, 1319
HaeII RGCGCY 2 cut(s) 75, 356
HaeIII GGCC 2 cut(s) 377, 976
HapII CCGG 2 cut(s) 167, 241
HhaI GCGC 5 cut(s) 74, 128, 355, 397, 870
Hin6I GCGC 5 cut(s) 72, 126, 353, 395, 868
HinP1I GCGC 5 cut(s) 72, 126, 353, 395, 868
HinfI GANTC 4 cut(s) 443, 1028, 1359, 1412
HpaII CCGG 2 cut(s) 167, 241
HphI GGTGA 2 cut(s) 136, 968
Hpy166II GTNNAC 3 cut(s) 434, 1115, 1230
Hpy188I TCNGA 5 cut(s) 272, 319, 631, 703, 838
Hpy188III TCNNGA 3 cut(s) 90, 1019, 1363
Hpy8I GTNNAC 3 cut(s) 434, 1115, 1230
Hpy99I CGWCG 1 cut(s) 1359
HpyAV CCTTC 2 cut(s) 807, 1313
HpyCH4III ACNGT 7 cut(s) 176, 431, 637, 848, 1009, 1270, 1355
HpyCH4IV ACGT 7 cut(s) 62, 250, 262, 399, 559, 809, 1121
HpyF10VI GCNNNNNNNGC 6 cut(s) 196, 328, 519, 575, 596, 1294
HpyF3I CTNAG 6 cut(s) 269, 308, 318, 543, 1239, 1387
HpySE526I ACGT 7 cut(s) 62, 250, 262, 399, 559, 809, 1121
HspAI GCGC 5 cut(s) 72, 126, 353, 395, 868
Ksp22I TGATCA 2 cut(s) 420, 750
Kzo9I GATC 5 cut(s) 420, 750, 763, 1306, 1397
LguI GCTCTTC 1 cut(s) 924
LmnI GCTCC 4 cut(s) 350, 1075, 1132, 1300
Lsp1109I GCAGC 7 cut(s) 202, 205, 208, 343, 346, 478, 497
LweI GCATC 3 cut(s) 414, 565, 1053
MaeII ACGT 7 cut(s) 62, 250, 262, 399, 559, 809, 1121
MaeIII GTNAC 7 cut(s) 142, 176, 258, 581, 1009, 1033, 1327
MalI GATC 5 cut(s) 422, 752, 765, 1308, 1399
MboI GATC 5 cut(s) 420, 750, 763, 1306, 1397
MboII GAAGA 5 cut(s) 425, 941, 1160, 1204, 1407
MfeI CAATTG 1 cut(s) 1290
MflI RGATCY 1 cut(s) 1397
MhlI GDGCHC 5 cut(s) 270, 324, 479, 544, 1072
MlsI TGGCCA 1 cut(s) 976
MluCI AATT 6 cut(s) 43, 295, 696, 882, 1106, 1290
MluNI TGGCCA 1 cut(s) 976
MmeI TCCRAC 1 cut(s) 1274
Mox20I TGGCCA 1 cut(s) 976
MscI TGGCCA 1 cut(s) 976
MseI TTAA 2 cut(s) 987, 1161
MslI CAYNNNNRTG 1 cut(s) 590
Msp20I TGGCCA 1 cut(s) 976
MspI CCGG 2 cut(s) 167, 241
MspR9I CCNGG 3 cut(s) 167, 242, 780
MunI CAATTG 1 cut(s) 1290
Mva1269I GAATGC 1 cut(s) 522
MvaI CCWGG 1 cut(s) 780
MvnI CGCG 2 cut(s) 128, 395
MwoI GCNNNNNNNGC 6 cut(s) 196, 328, 519, 575, 596, 1294
NciI CCSGG 2 cut(s) 167, 242
NdeII GATC 5 cut(s) 420, 750, 763, 1306, 1397
NlaIV GGNNCC 3 cut(s) 822, 1146, 1245
NmuCI GTSAC 3 cut(s) 142, 258, 581
NspI RCATGY 4 cut(s) 721, 892, 983, 995
PagI TCATGA 2 cut(s) 1018, 1362
PciI ACATGT 2 cut(s) 888, 979
PciSI GCTCTTC 1 cut(s) 924
PctI GAATGC 1 cut(s) 522
PfeI GAWTC 4 cut(s) 443, 1028, 1359, 1412
PflMI CCANNNNNTGG 1 cut(s) 1079
PkrI GCNGC 9 cut(s) 192, 195, 198, 333, 336, 457, 468, 512, 515
PmaCI CACGTG 2 cut(s) 251, 263
PmlI CACGTG 2 cut(s) 251, 263
Ppu21I YACGTR 2 cut(s) 251, 263
PpuMI RGGWCCY 1 cut(s) 1243
PscI ACATGT 2 cut(s) 888, 979
PsiI TTATAA 1 cut(s) 695
Psp124BI GAGCTC 3 cut(s) 270, 479, 1072
Psp1406I AACGTT 1 cut(s) 809
Psp5II RGGWCCY 1 cut(s) 1243
Psp6I CCWGG 1 cut(s) 778
PspCI CACGTG 2 cut(s) 251, 263
PspFI CCCAGC 1 cut(s) 739
PspGI CCWGG 1 cut(s) 778
PspN4I GGNNCC 3 cut(s) 822, 1146, 1245
PspPI GGNCC 3 cut(s) 427, 1115, 1243
PspPPI RGGWCCY 1 cut(s) 1243
PsuI RGATCY 1 cut(s) 1397
RsaI GTAC 5 cut(s) 361, 435, 645, 815, 1277
RsaNI GTAC 5 cut(s) 360, 434, 644, 814, 1276
RseI CAYNNNNRTG 1 cut(s) 590
SacI GAGCTC 3 cut(s) 270, 479, 1072
SapI GCTCTTC 1 cut(s) 924
SaqAI TTAA 2 cut(s) 987, 1161
SatI GCNGC 9 cut(s) 191, 194, 197, 332, 335, 456, 467, 511, 514
Sau3AI GATC 5 cut(s) 420, 750, 763, 1306, 1397
Sau96I GGNCC 3 cut(s) 427, 1115, 1243
ScrFI CCNGG 3 cut(s) 167, 242, 780
SduI GDGCHC 5 cut(s) 270, 324, 479, 544, 1072
SfaNI GCATC 3 cut(s) 414, 565, 1053
SfcI CTRYAG 1 cut(s) 480
SinI GGWCC 3 cut(s) 427, 1115, 1243
SmiMI CAYNNNNRTG 1 cut(s) 590
Sse9I AATT 6 cut(s) 43, 295, 696, 882, 1106, 1290
SsiI CCGC 3 cut(s) 303, 455, 513
SspI AATATT 2 cut(s) 97, 673
SstI GAGCTC 3 cut(s) 270, 479, 1072
StyD4I CCNGG 3 cut(s) 165, 240, 778
TaaI ACNGT 7 cut(s) 176, 431, 637, 848, 1009, 1270, 1355
TaiI ACGT 7 cut(s) 65, 253, 265, 402, 562, 812, 1124
TaqI TCGA 5 cut(s) 91, 161, 369, 1104, 1357
TasI AATT 6 cut(s) 43, 295, 696, 882, 1106, 1290
TatI WGTACW 2 cut(s) 813, 1275
TauI GCSGC 2 cut(s) 458, 516
TfiI GAWTC 4 cut(s) 443, 1028, 1359, 1412
Tru1I TTAA 2 cut(s) 987, 1161
Tru9I TTAA 2 cut(s) 987, 1161
TscAI CASTG 7 cut(s) 292, 445, 597, 853, 1117, 1179, 1237
TseFI GTSAC 3 cut(s) 142, 258, 581
TseI GCWGC 7 cut(s) 190, 193, 196, 331, 334, 466, 510
Tsp45I GTSAC 3 cut(s) 142, 258, 581
TspDTI ATGAA 5 cut(s) 67, 170, 618, 1351, 1379
TspGWI ACGGA 1 cut(s) 377
TspRI CASTG 7 cut(s) 292, 445, 597, 853, 1117, 1179, 1237
Van91I CCANNNNNTGG 1 cut(s) 1079
VpaK11BI GGWCC 3 cut(s) 427, 1115, 1243
XapI RAATTY 1 cut(s) 1106
XceI RCATGY 4 cut(s) 721, 892, 983, 995
XcmI CCANNNNNNNNNTGG 2 cut(s) 904, 1216
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.