RLG00000005609
ERF Family

Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N- methyltransferase family

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr2
Physical Location & Seq
Reverse (-)
266093 .. 271013
4921 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000005609

Sequence Viewer

Length: 1377 bp
ATGAACTCCAACCCCTCCGCATACAGTAACAGTAACAGTAACGGCTACTATGCACAGCCGCCGCCGCAGCAGCAGCAGCAGCAGCGCCAGCACCAAGGAATGAACAGAGTTCGCCGGGGAACACGTGGCAGGTCACGTGACGGCCATGGAAGTGACATTATTAGGGTTTCTGAGGCTACCAAGCAGCAACCACAGCCGGAAGGAGCGCCTTGCACGGACTTCGACATGGCCTATTTCCACTCCTACGCCCACGTTGGCATCCACGAAGAGATGATCAAGGATCGTGTGCGCACTGAAACTTACAGGGCAGCAATTATGCAGCACCAGAGTTGTATTGCTGGCAAAGTGGTAGTGGACGTTGGCTGTGGCACAGGAATTCTCTCTATCTTTTGTGCTCAAGCTGGTGCAAAACGTGTATATGCTGTCGATGCAAGTGACATTGCAGTGCAGGCAAATGAAGTTGTCAAAGCAAACAATCTATCTGACACGATCATCGTACTACATGGGCGAGTTGAGGATGTTCATATTGATGAGGAGGTTGATGTTATAATTTCAGAGTGGATGGGATACATGCTTCTGTATGAGAGTATGCTTGGAAGTGTCATTACAGCCAGAGATCGCTGGCTAAAACCCGGAGGTCTTATACTTCCTTCAAATGCAACGTTGTACATAGCACCTATCACACATGCTGATAGATACAGTGAAAGCATTGATTTCTGGCGCAATGTTTATGGAATTGATATGTCTGCCATGTTGCCTTTGGCAAAGCAATGTGCGTTTGAAGAGCCATGTGTTGAGACAATCGTGGGTGAGAATGTTTTAACATGGCCACATGTGGTTAAGCATGTGGACTGCCATAAAATTTCACTTCATGAGCTGGAATCTGTTACAACAAGCTATAAGTTCAAATCAATGATGCGAGCTCCACTACATGGGTTTGCATTTTGGTTTGACGTCGAATTCAATGGACCTGCAATAGCTCTCACAAATAATCATGCACCATCCCAACTTCCTAACAATCATACAGTGGAGGGTCAGCAGAGGAGGAAACGGGCAAATCCCAGTGATGCGTTGGTGCTGTCGACTGCACCTGAGGACCCCCCAACACATTGGCAACAGACTGTGCTATACTTTTATGACCCAATAGAGGTGGAGCAAGATCAACTGATTGAAGGTTCCGTTACATTATCACAAAGCAAAGAAAATCGCCGATTCATGAATATCCATCTCGAATATGCCTCGGGTGGAAGATCCTTTGTCAAAGAGTCAGTGATGAGCCCCCAACTCTCCGCAGACCTTGATTCTTTACAGATACTTCTGGGTGACCTTGCAATAACTTTTCCTTGCAAAAGCCCTGAAGAAAAGGCTACTTATTAG

Protein Analysis

459

Amino Acids

51.27

Weight (kDa)

5.69

Isoelectric Point (pI)

52.49

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Methyltransf_9 PF08003 95 - 218 1.8e-06 Protein of unknown function (DUF1698)
TehB PF03848 98 - 216 8.8e-07 Tellurite resistance protein TehB
TRM5-TYW2_MTfase PF02475 102 - 191 2.1e-07 TRM5/TYW2 methyltransferase domain
Methyltransf_23 PF13489 111 - 218 1.7e-06 Methyltransferase domain
PrmA PF06325 113 - 186 2.7e-13 Ribosomal protein L11 methyltransferase (PrmA)
MTS PF05175 113 - 185 7.7e-08 Methyltransferase small domain
Methyltransf_31 PF13847 114 - 218 9.6e-07 Methyltransferase domain
Methyltransf_25 PF13649 117 - 213 1.3e-11 Methyltransferase domain
Methyltransf_11 PF08241 118 - 215 6.3e-10 Methyltransferase domain
PRMT_C PF22528 219 - 324 1.4e-20 Arginine methyltransferase oligomerization subdomain
PRMT_C PF22528 357 - 414 5.8e-15 Arginine methyltransferase oligomerization subdomain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 548
AatII GACGTC 1 cut(s) 957
Acc16I TGCGCA 1 cut(s) 290
Acc36I ACCTGC 2 cut(s) 120, 979
AccB7I CCANNNNNTGG 1 cut(s) 932
AccI GTMKAC 1 cut(s) 1082
AciI CCGC 5 cut(s) 18, 59, 62, 65, 1290
AclI AACGTT 1 cut(s) 662
AclWI GGATC 2 cut(s) 288, 1245
AcoI YGGCCR 2 cut(s) 142, 827
AcsI RAATTY 3 cut(s) 375, 861, 959
AcuI CTGAAG 1 cut(s) 1377
AcvI CACGTG 2 cut(s) 125, 137
AcyI GRCGYC 1 cut(s) 954
AfaI GTAC 2 cut(s) 498, 668
AfiI CCNNNNNNNGG 2 cut(s) 932, 1147
AflIII ACRYGT 3 cut(s) 122, 412, 832
AgsI TTSAA 5 cut(s) 654, 782, 907, 964, 1172
AluBI AGCT 5 cut(s) 401, 877, 897, 923, 980
AluI AGCT 5 cut(s) 401, 877, 897, 923, 980
Alw21I GWGCWC 2 cut(s) 397, 925
Alw26I GTCTC 1 cut(s) 791
AlwI GGATC 2 cut(s) 288, 1245
Ama87I CYCGRG 1 cut(s) 1240
AoxI GGCC 3 cut(s) 142, 228, 827
ApeKI GCWGC 9 cut(s) 67, 70, 73, 76, 79, 82, 184, 308, 319
ApoI RAATTY 3 cut(s) 375, 861, 959
AspLEI GCGC 4 cut(s) 87, 208, 291, 723
AspS9I GGNCC 2 cut(s) 968, 1096
AsuC2I CCSGG 2 cut(s) 116, 633
AsuHPI GGTGA 2 cut(s) 821, 1334
AvaI CYCGRG 1 cut(s) 1240
AvaII GGWCC 2 cut(s) 968, 1096
AxyI CCTNAGG 1 cut(s) 1092
BalI TGGCCA 1 cut(s) 829
BanII GRGCYC 2 cut(s) 925, 1280
BarI GAAGNNNNNNTAC 2 cut(s) 589, 621
BbrPI CACGTG 2 cut(s) 125, 137
Bbv12I GWGCWC 2 cut(s) 397, 925
BbvI GCAGC 9 cut(s) 79, 82, 85, 88, 91, 94, 196, 320, 331
BccI CCATC 3 cut(s) 556, 1009, 1233
BceAI ACGGC 2 cut(s) 58, 157
BcgI CGANNNNNNTGC 2 cut(s) 202, 236
BciVI GTATCC 1 cut(s) 560
BclI TGATCA 1 cut(s) 273
BcnI CCSGG 2 cut(s) 116, 633
BcoDI GTCTC 1 cut(s) 791
BfoI RGCGCY 2 cut(s) 88, 209
BfuAI ACCTGC 2 cut(s) 120, 979
BfuI GTATCC 1 cut(s) 560
Bme1390I CCNGG 2 cut(s) 116, 633
Bme18I GGWCC 2 cut(s) 968, 1096
BmeT110I CYCGRG 1 cut(s) 1240
BmgT120I GGNCC 2 cut(s) 968, 1096
BmiI GGNNCC 2 cut(s) 1098, 1177
BmrFI CCNGG 2 cut(s) 116, 633
BmrI ACTGGG 1 cut(s) 1056
BmsI GCATC 4 cut(s) 267, 418, 906, 1057
BmuI ACTGGG 1 cut(s) 1056
BpuEI CTTGAG 1 cut(s) 381
BpuMI CCSGG 2 cut(s) 116, 633
BsaAI YACGTR 2 cut(s) 125, 137
BsaHI GRCGYC 1 cut(s) 954
BsaJI CCNNGG 4 cut(s) 94, 115, 145, 1239
Bsc4I CCNNNNNNNGG 2 cut(s) 932, 1147
Bse1I ACTGG 1 cut(s) 1062
Bse21I CCTNAGG 1 cut(s) 1092
Bse3DI GCAATG 3 cut(s) 438, 730, 776
BseDI CCNNGG 4 cut(s) 94, 115, 145, 1239
BseGI GGATG 4 cut(s) 258, 523, 567, 1001
BseLI CCNNNNNNNGG 2 cut(s) 932, 1147
BseMI GCAATG 3 cut(s) 438, 730, 776
BseMII CTCAG 2 cut(s) 162, 1083
BseNI ACTGG 1 cut(s) 1062
BseRI GAGGAG 2 cut(s) 548, 1057
BseXI GCAGC 9 cut(s) 79, 82, 85, 88, 91, 94, 196, 320, 331
BsgI GTGCAG 2 cut(s) 467, 1071
BshFI GGCC 3 cut(s) 144, 230, 829
BsiHKAI GWGCWC 2 cut(s) 397, 925
BsiHKCI CYCGRG 1 cut(s) 1240
BsiSI CCGG 3 cut(s) 115, 197, 633
BslI CCNNNNNNNGG 2 cut(s) 932, 1147
BsmAI GTCTC 1 cut(s) 791
BsnI GGCC 3 cut(s) 144, 230, 829
BsoBI CYCGRG 1 cut(s) 1240
Bsp1286I GDGCHC 3 cut(s) 397, 925, 1280
Bsp1407I TGTACA 1 cut(s) 666
Bsp143I GATC 6 cut(s) 273, 280, 489, 616, 1159, 1250
Bsp19I CCATGG 1 cut(s) 145
BspACI CCGC 5 cut(s) 18, 59, 62, 65, 1290
BspANI GGCC 3 cut(s) 144, 230, 829
BspCNI CTCAG 2 cut(s) 163, 1084
BspHI TCATGA 2 cut(s) 871, 1215
BspLI GGNNCC 2 cut(s) 1098, 1177
BspMI ACCTGC 2 cut(s) 120, 979
BspPI GGATC 2 cut(s) 288, 1245
BspQI GCTCTTC 1 cut(s) 777
BsrDI GCAATG 3 cut(s) 438, 730, 776
BsrGI TGTACA 1 cut(s) 666
BsrI ACTGG 1 cut(s) 1062
BssECI CCNNGG 4 cut(s) 94, 115, 145, 1239
BssMI GATC 6 cut(s) 273, 280, 489, 616, 1159, 1250
BssNI GRCGYC 1 cut(s) 954
BssT1I CCWWGG 2 cut(s) 94, 145
Bst4CI ACNGT 6 cut(s) 26, 32, 38, 701, 1027, 1123
Bst6I CTCTTC 2 cut(s) 261, 777
BstACI GRCGYC 1 cut(s) 954
BstAUI TGTACA 1 cut(s) 666
BstBAI YACGTR 2 cut(s) 125, 137
BstC8I GCNNGC 5 cut(s) 89, 340, 450, 623, 921
BstDEI CTNAG 2 cut(s) 171, 1092
BstDSI CCRYGG 1 cut(s) 145
BstEII GGTNACC 1 cut(s) 1322
BstF5I GGATG 4 cut(s) 258, 523, 567, 1001
BstH2I RGCGCY 2 cut(s) 88, 209
BstHHI GCGC 4 cut(s) 87, 208, 291, 723
BstKTI GATC 6 cut(s) 276, 283, 492, 619, 1162, 1253
BstMAI GTCTC 1 cut(s) 791
BstMBI GATC 6 cut(s) 273, 280, 489, 616, 1159, 1250
BstNSI RCATGY 4 cut(s) 574, 689, 836, 848
BstPI GGTNACC 1 cut(s) 1322
BstSCI CCNGG 2 cut(s) 114, 631
BstV1I GCAGC 9 cut(s) 79, 82, 85, 88, 91, 94, 196, 320, 331
BstX2I RGATCY 1 cut(s) 1250
BstXI CCANNNNNNTGG 1 cut(s) 1110
BstYI RGATCY 1 cut(s) 1250
Bsu36I CCTNAGG 1 cut(s) 1092
BsuI GTATCC 1 cut(s) 560
BsuRI GGCC 3 cut(s) 144, 230, 829
BtgI CCRYGG 1 cut(s) 145
BtsCI GGATG 4 cut(s) 258, 523, 567, 1001
BtsI GCAGTG 1 cut(s) 450
BtsIMutI CAGTG 6 cut(s) 291, 450, 706, 1032, 1069, 1275
BveI ACCTGC 2 cut(s) 120, 979
Cac8I GCNNGC 5 cut(s) 89, 340, 450, 623, 921
CciI TCATGA 2 cut(s) 871, 1215
CfoI GCGC 4 cut(s) 87, 208, 291, 723
Cfr13I GGNCC 2 cut(s) 968, 1096
Csp6I GTAC 2 cut(s) 497, 667
CspCI CAANNNNNGTGG 2 cut(s) 1131, 1166
CviQI GTAC 2 cut(s) 497, 667
DdeI CTNAG 2 cut(s) 171, 1092
DpnI GATC 6 cut(s) 275, 282, 491, 618, 1161, 1252
DpnII GATC 6 cut(s) 273, 280, 489, 616, 1159, 1250
EaeI YGGCCR 2 cut(s) 142, 827
Eam1104I CTCTTC 2 cut(s) 261, 777
EarI CTCTTC 2 cut(s) 261, 777
Ecl136II GAGCTC 1 cut(s) 923
Eco130I CCWWGG 2 cut(s) 94, 145
Eco24I GRGCYC 2 cut(s) 925, 1280
Eco47I GGWCC 2 cut(s) 968, 1096
Eco53kI GAGCTC 1 cut(s) 923
Eco57I CTGAAG 1 cut(s) 1377
Eco72I CACGTG 2 cut(s) 125, 137
Eco81I CCTNAGG 1 cut(s) 1092
Eco88I CYCGRG 1 cut(s) 1240
Eco91I GGTNACC 1 cut(s) 1322
EcoICRI GAGCTC 1 cut(s) 923
EcoO109I RGGNCCY 1 cut(s) 1096
EcoO65I GGTNACC 1 cut(s) 1322
EcoRI GAATTC 2 cut(s) 375, 959
EcoT14I CCWWGG 2 cut(s) 94, 145
EcoT38I GRGCYC 2 cut(s) 925, 1280
ErhI CCWWGG 2 cut(s) 94, 145
FbaI TGATCA 1 cut(s) 273
FblI GTMKAC 1 cut(s) 1082
FokI GGATG 4 cut(s) 245, 530, 574, 988
FriOI GRGCYC 2 cut(s) 925, 1280
FspAI RTGCGCAY 1 cut(s) 290
FspI TGCGCA 1 cut(s) 290
GlaI GCGC 4 cut(s) 86, 207, 290, 722
HaeII RGCGCY 2 cut(s) 88, 209
HaeIII GGCC 3 cut(s) 144, 230, 829
HapII CCGG 3 cut(s) 115, 197, 633
HhaI GCGC 4 cut(s) 87, 208, 291, 723
Hin1I GRCGYC 1 cut(s) 954
Hin6I GCGC 4 cut(s) 85, 206, 289, 721
HinP1I GCGC 4 cut(s) 85, 206, 289, 721
HincII GTYRAC 1 cut(s) 1083
HindII GTYRAC 1 cut(s) 1083
HinfI GANTC 4 cut(s) 881, 1212, 1265, 1301
HpaII CCGG 3 cut(s) 115, 197, 633
HphI GGTGA 2 cut(s) 821, 1334
Hpy166II GTNNAC 3 cut(s) 355, 850, 1083
Hpy188I TCNGA 3 cut(s) 172, 484, 556
Hpy188III TCNNGA 3 cut(s) 872, 1216, 1229
Hpy8I GTNNAC 3 cut(s) 355, 850, 1083
Hpy99I CGWCG 1 cut(s) 959
HpyAV CCTTC 3 cut(s) 194, 660, 1166
HpyCH4III ACNGT 6 cut(s) 26, 32, 38, 701, 1027, 1123
HpyCH4IV ACGT 7 cut(s) 124, 136, 252, 357, 412, 662, 954
HpyF3I CTNAG 2 cut(s) 171, 1092
HpySE526I ACGT 7 cut(s) 124, 136, 252, 357, 412, 662, 954
Hsp92I GRCGYC 1 cut(s) 954
HspAI GCGC 4 cut(s) 85, 206, 289, 721
Ksp22I TGATCA 1 cut(s) 273
Kzo9I GATC 6 cut(s) 273, 280, 489, 616, 1159, 1250
LguI GCTCTTC 1 cut(s) 777
LmnI GCTCC 3 cut(s) 203, 928, 1153
Lsp1109I GCAGC 9 cut(s) 79, 82, 85, 88, 91, 94, 196, 320, 331
LweI GCATC 4 cut(s) 267, 418, 906, 1057
MaeII ACGT 7 cut(s) 124, 136, 252, 357, 412, 662, 954
MalI GATC 6 cut(s) 275, 282, 491, 618, 1161, 1252
MboI GATC 6 cut(s) 273, 280, 489, 616, 1159, 1250
MboII GAAGA 4 cut(s) 278, 794, 1260, 1370
MflI RGATCY 1 cut(s) 1250
MhlI GDGCHC 3 cut(s) 397, 925, 1280
MlsI TGGCCA 1 cut(s) 829
MluCI AATT 6 cut(s) 312, 375, 549, 735, 861, 959
MluNI TGGCCA 1 cut(s) 829
MlyI GAGTC 1 cut(s) 1274
MmeI TCCRAC 1 cut(s) 33
Mox20I TGGCCA 1 cut(s) 829
MscI TGGCCA 1 cut(s) 829
MseI TTAA 2 cut(s) 821, 840
MslI CAYNNNNRTG 3 cut(s) 150, 443, 528
Msp20I TGGCCA 1 cut(s) 829
MspI CCGG 3 cut(s) 115, 197, 633
MspR9I CCNGG 2 cut(s) 116, 633
NciI CCSGG 2 cut(s) 116, 633
NcoI CCATGG 1 cut(s) 145
NdeII GATC 6 cut(s) 273, 280, 489, 616, 1159, 1250
NlaIV GGNNCC 2 cut(s) 1098, 1177
NmuCI GTSAC 5 cut(s) 132, 137, 152, 434, 1322
NsbI TGCGCA 1 cut(s) 290
NspI RCATGY 4 cut(s) 574, 689, 836, 848
PagI TCATGA 2 cut(s) 871, 1215
PciI ACATGT 1 cut(s) 832
PciSI GCTCTTC 1 cut(s) 777
PfeI GAWTC 3 cut(s) 881, 1212, 1301
PflMI CCANNNNNTGG 1 cut(s) 932
PleI GAGTC 1 cut(s) 1273
PmaCI CACGTG 2 cut(s) 125, 137
PmlI CACGTG 2 cut(s) 125, 137
PpsI GAGTC 1 cut(s) 1273
Ppu21I YACGTR 2 cut(s) 125, 137
PpuMI RGGWCCY 1 cut(s) 1096
PscI ACATGT 1 cut(s) 832
PsiI TTATAA 1 cut(s) 548
Psp124BI GAGCTC 1 cut(s) 925
Psp1406I AACGTT 1 cut(s) 662
Psp5II RGGWCCY 1 cut(s) 1096
PspCI CACGTG 2 cut(s) 125, 137
PspEI GGTNACC 1 cut(s) 1322
PspN4I GGNNCC 2 cut(s) 1098, 1177
PspPI GGNCC 2 cut(s) 968, 1096
PspPPI RGGWCCY 1 cut(s) 1096
PsuI RGATCY 1 cut(s) 1250
RsaI GTAC 2 cut(s) 498, 668
RsaNI GTAC 2 cut(s) 497, 667
RseI CAYNNNNRTG 3 cut(s) 150, 443, 528
SacI GAGCTC 1 cut(s) 925
SalI GTCGAC 1 cut(s) 1081
SapI GCTCTTC 1 cut(s) 777
SaqAI TTAA 2 cut(s) 821, 840
Sau3AI GATC 6 cut(s) 273, 280, 489, 616, 1159, 1250
Sau96I GGNCC 2 cut(s) 968, 1096
SchI GAGTC 1 cut(s) 1274
ScrFI CCNGG 2 cut(s) 116, 633
SduI GDGCHC 3 cut(s) 397, 925, 1280
SfaNI GCATC 4 cut(s) 267, 418, 906, 1057
SinI GGWCC 2 cut(s) 968, 1096
SmiMI CAYNNNNRTG 3 cut(s) 150, 443, 528
SmlI CTYRAG 1 cut(s) 396
SmoI CTYRAG 1 cut(s) 396
Sse9I AATT 6 cut(s) 312, 375, 549, 735, 861, 959
SsiI CCGC 5 cut(s) 18, 59, 62, 65, 1290
SstI GAGCTC 1 cut(s) 925
StyD4I CCNGG 2 cut(s) 114, 631
StyI CCWWGG 2 cut(s) 94, 145
TaaI ACNGT 6 cut(s) 26, 32, 38, 701, 1027, 1123
TaiI ACGT 7 cut(s) 127, 139, 255, 360, 415, 665, 957
TaqI TCGA 5 cut(s) 222, 426, 957, 1082, 1230
TasI AATT 6 cut(s) 312, 375, 549, 735, 861, 959
TatI WGTACW 1 cut(s) 666
TauI GCSGC 3 cut(s) 61, 64, 67
TfiI GAWTC 3 cut(s) 881, 1212, 1301
Tru1I TTAA 2 cut(s) 821, 840
Tru9I TTAA 2 cut(s) 821, 840
TscAI CASTG 6 cut(s) 298, 450, 706, 1032, 1069, 1275
TseFI GTSAC 5 cut(s) 132, 137, 152, 434, 1322
TseI GCWGC 9 cut(s) 67, 70, 73, 76, 79, 82, 184, 308, 319
Tsp45I GTSAC 5 cut(s) 132, 137, 152, 434, 1322
TspDTI ATGAA 7 cut(s) 17, 116, 471, 512, 860, 1204, 1232
TspGWI ACGGA 2 cut(s) 230, 1168
TspRI CASTG 6 cut(s) 298, 450, 706, 1032, 1069, 1275
Van91I CCANNNNNTGG 1 cut(s) 932
VpaK11BI GGWCC 2 cut(s) 968, 1096
XapI RAATTY 3 cut(s) 375, 861, 959
XceI RCATGY 4 cut(s) 574, 689, 836, 848
XcmI CCANNNNNNNNNTGG 2 cut(s) 757, 1069
XmiI GTMKAC 1 cut(s) 1082
ZraI GACGTC 1 cut(s) 955
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.