FvH4_5g02760

AT-rich interactive domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb5
OG0010472
Physical Location & Seq
Reverse (-)
1659813 .. 1664327
4515 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_5g02760.t1

Sequence Viewer

Length: 1890 bp
ATGGCGGAATGGTCGCTTTTGACAAATGGGTCTGTGTTAGATTTGGCTGAAACTAGTGATGCTAATCCAATTAATGGGGGTAGTGTTGGTAGTGGTATTGAATTTGTAAAAGATAGTGTAGAATGTGATCATAAGGGTACTGATATTGTAAAAGATGGTGTAGAATGTGTTAATGGTGATGATGATGATTATAAGGGTAGGTTAAGATGTACATTTGATCAGGTTCTATCTGTTTTTATTAAGGAAATTGGTGATAGAGGTGTTGTTAGGCCTGTGCCTGCAATTTTTGGTGATAGGCAGCATGTGGATTTATTCAAATTGTACTGTGTTGTGAGAGATAAAGGTGGGTATGATTTGGTTTCGAAGAGGAGGCTATGGTCTCATGTGTCCAAAGAGTTGGGTTTGGATAATGGTGCAACGGCGGCTTCAGTAAAATTGATCTACTTTAAGTATTTGAATGAGTTGGAGATATGGTTTAGGGAGAGTTGTACGGGTAGGAGCTTAGGGAATGGGGAGTCTGGAAGGTATGGGACTTTTCATTTGATGTCTGTGGAGCTGGAGACAGAATTTAGAGGTTTGTTGTTGGATGGGACAGAGCAGAAGGACAATGGTGATGGACTGGTTCATTTGGAATCTGACCGAAATGGGAAGATTGAATATGGTTTATCAGATACGAAAGATGCATGCACAATGCATTCAGGTACTGGAACTGGCAATGGTCATGACGACGAAAAAGCTTGTCATGATGATCAAAATGGTACTTTTGTATTACCCTCCAGAGTCGATAGTAAAGAAAACGAACGTAAAAGAAAGCGACGAGAATCCTTATCAGGAATGCTGAATTGGGTAATCCAGACAGCAACACAACTTGGTGATGTTTCAATTGGAGAGATACCAGAGCCAGCTAAGTGGAAGAAGCATCAGGGCAACGAGTTCTGGTTCCAGGCAATTAAAGCAAGGGAGGCATTGATGGTAAGAAGAGATATTAATCCAAAGACTGAAGAGTTACTCCAGCAGAAGAAACTAAGGATGCATCCTTTGATGTATGAAGATAATATTGCTGCTGGTCACCTTTTCTCAGAGAGGTTAAGATGCAGAGGAAGGCTTCCTCATTCTACTAAATCTCGCTCGTGCACATGTTGCAATTCATCGCCACCGACTCAGAGTAATTTGATAAGTCCTAGTATGGAAGAACCTAAGGAGCAAGAACCTATGGAAGTTGATTTAGCGTCCCCTCACACATCGGTTATCCCATCTGACCAGGACGAATTCCGTGAAAAGTATGTTTCTATAGGCCCTCTCTTTCAAGCTGATGTTCCTGAATGGACCGGTGAGGCGTCAGAAAGTGATGATAAATGGCTAGGCACAAGGGTATGGCCCTTGGAATGTGAAGAAAACGCTTCCCTTGTTAAGAAGGATACAATTGGCCGAGGAAGACCACATTTTTGTGGCTGTCGGCTTCCAGGTTCTGTTACATGTCTCAGATTTCACATTGCTGAGGCTAGGATGAAATTGAAGAAAGAACTTGGTTCCTTGTTCTATCATTGGAGATTTGATCGTATGGGTGAGGAAATTTGTCTTCAATGGACAGCTGAAGAGGAAAAGAGATTCAAGATCTTGGTACAGTCAAAGTATCCTTTCTTTTGGAATAGCGCATCCAAGTGGTTTCCCAGAAAAACTAGGGAAAACTTGGTGAGCTATTACTTCAATGTGTTTCTTGTTAGGCGAAGAAGTTACCAGAACCGTGCAACTCCAAAAAATATAGATAGCGATGATGACGAAACAGATTTTGGGTCTTTAAGTGAGGGTTTTGGGCATGAGGCAGTCAAAGTTGCAGGCTCCAGTTTTGTTGCTTGTTCCCAGAATAAGCAGTGTGACATCTTGGATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
ARID

Protein Analysis

630

Amino Acids

71.27

Weight (kDa)

5.76

Isoelectric Point (pI)

49.89

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ARID PF01388 74 - 154 7.8e-13 ARID/BRIGHT DNA binding domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0010472)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G11400 AT4G11400
fragaria_vesca FvH4_5g02760 FvH4_5g02770 FvH4_5g02771 FvH4_5g02772
malus_domestica MD06G1087600.v1.1 MD14G1108400.v1.1
prunus_persica Prupe.5G103500_v2.0.a1
pyrus_communis pycom06g08360 pycom14g10310
rosa_chinensis RchiOBHm_Chr7g0197161
rosa_laevigata RLG00000003956
rosa_multiflora Rmu_ssc0000465.1_g000021
rosa_roxburghii Rroxscaffold_3G00258640
rosa_rugosa Rorug07G0038200
rosa_samantha Rh7AG162900 Rh7BG164900 Rh7CG170900 Rh7DG164300
rosa_wichuraiana Rw7G014220

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 192
AasI GACNNNNNNGTC 1 cut(s) 28
AccB7I CCANNNNNTGG 1 cut(s) 74
AciI CCGC 2 cut(s) 5, 422
AcoI YGGCCR 1 cut(s) 1426
AcsI RAATTY 4 cut(s) 101, 566, 1268, 1572
AcuI CTGAAG 3 cut(s) 411, 1020, 1614
AcyI GRCGYC 1 cut(s) 1337
AfaI GTAC 7 cut(s) 139, 211, 323, 490, 703, 760, 1623
AfiI CCNNNNNNNGG 1 cut(s) 74
AflIII ACRYGT 2 cut(s) 1136, 1475
AgeI ACCGGT 1 cut(s) 1328
AhlI ACTAGT 1 cut(s) 53
AjnI CCWGG 3 cut(s) 942, 1260, 1462
AjuI GAANNNNNNNTTGG 4 cut(s) 826, 858, 1773, 1805
AluBI AGCT 7 cut(s) 501, 556, 737, 905, 1310, 1592, 1698
AluI AGCT 7 cut(s) 501, 556, 737, 905, 1310, 1592, 1698
Alw21I GWGCWC 1 cut(s) 1136
Alw26I GTCTC 3 cut(s) 384, 554, 1484
Alw44I GTGCAC 1 cut(s) 1132
AlwNI CAGNNNCTG 2 cut(s) 704, 1469
AoxI GGCC 4 cut(s) 269, 1294, 1376, 1426
ApaLI GTGCAC 1 cut(s) 1132
ApeKI GCWGC 2 cut(s) 298, 1061
ApoI RAATTY 4 cut(s) 101, 566, 1268, 1572
ArsI GACNNNNNNTTYG 4 cut(s) 523, 555, 1428, 1460
AseI ATTAAT 2 cut(s) 72, 987
AsiGI ACCGGT 1 cut(s) 1328
AspLEI GCGC 1 cut(s) 1655
AspS9I GGNCC 3 cut(s) 1295, 1326, 1377
AsuHPI GGTGA 9 cut(s) 188, 263, 302, 623, 884, 1061, 1343, 1577, 1705
AsuII TTCGAA 1 cut(s) 362
AvaII GGWCC 1 cut(s) 1326
AxyI CCTNAGG 1 cut(s) 1197
BaeGI GKGCMC 1 cut(s) 1136
BaeI ACNNNNGTAYC 2 cut(s) 750, 783
BauI CACGAG 1 cut(s) 1129
BbsI GAAGAC 2 cut(s) 1441, 1571
Bbv12I GWGCWC 1 cut(s) 1136
BbvCI CCTCAGC 1 cut(s) 1497
BbvI GCAGC 2 cut(s) 310, 1048
BccI CCATC 5 cut(s) 149, 581, 608, 964, 1261
BceAI ACGGC 1 cut(s) 435
BciT130I CCWGG 3 cut(s) 944, 1262, 1464
BciVI GTATCC 2 cut(s) 1411, 1644
BclI TGATCA 3 cut(s) 127, 217, 748
BcoDI GTCTC 3 cut(s) 384, 554, 1484
BcuI ACTAGT 1 cut(s) 53
BfaI CTAG 5 cut(s) 54, 1182, 1361, 1503, 1680
BfmI CTRYAG 1 cut(s) 1290
BfuI GTATCC 2 cut(s) 1411, 1644
BglII AGATCT 1 cut(s) 1614
BisI GCNGC 3 cut(s) 299, 423, 1062
BlsI GCNGC 3 cut(s) 300, 424, 1063
Bme1390I CCNGG 3 cut(s) 944, 1262, 1464
Bme18I GGWCC 1 cut(s) 1326
BmgT120I GGNCC 3 cut(s) 1295, 1326, 1377
BmiI GGNNCC 3 cut(s) 941, 1531, 1840
BmrFI CCNGG 3 cut(s) 944, 1262, 1464
BmsI GCATC 7 cut(s) 49, 670, 928, 1020, 1042, 1082, 1664
BpiI GAAGAC 2 cut(s) 1441, 1571
BpmI CTGGAG 4 cut(s) 578, 760, 995, 1825
Bpu10I CCTNAGC 2 cut(s) 502, 1497
Bpu14I TTCGAA 1 cut(s) 362
BsaBI GATNNNNATC 2 cut(s) 63, 987
BsaHI GRCGYC 1 cut(s) 1337
BsaI GGTCTC 1 cut(s) 384
BsaJI CCNNGG 2 cut(s) 1380, 1429
BsaWI WCCGGW 1 cut(s) 1328
BsaXI ACNNNNNCTCC 2 cut(s) 458, 488
Bsc4I CCNNNNNNNGG 1 cut(s) 74
Bse118I RCCGGY 1 cut(s) 1328
Bse1I ACTGG 4 cut(s) 624, 709, 715, 1842
Bse21I CCTNAGG 1 cut(s) 1197
Bse3DI GCAATG 2 cut(s) 721, 1491
Bse8I GATNNNNATC 2 cut(s) 63, 987
BseBI CCWGG 3 cut(s) 944, 1262, 1464
BseDI CCNNGG 2 cut(s) 1380, 1429
BseGI GGATG 5 cut(s) 592, 1033, 1035, 1512, 1655
BseJI GATNNNNATC 2 cut(s) 63, 987
BseLI CCNNNNNNNGG 1 cut(s) 74
BseMI GCAATG 2 cut(s) 721, 1491
BseMII CTCAG 4 cut(s) 1092, 1175, 1488, 1495
BseNI ACTGG 4 cut(s) 624, 709, 715, 1842
BseRI GAGGAG 1 cut(s) 382
BseSI GKGCMC 1 cut(s) 1136
BseXI GCAGC 2 cut(s) 310, 1048
BshFI GGCC 4 cut(s) 271, 1296, 1378, 1428
BshTI ACCGGT 1 cut(s) 1328
BsiHKAI GWGCWC 1 cut(s) 1136
BsiSI CCGG 1 cut(s) 1329
BslFI GGGAC 3 cut(s) 544, 604, 1216
BslI CCNNNNNNNGG 1 cut(s) 74
BsmAI GTCTC 3 cut(s) 384, 554, 1484
BsmFI GGGAC 3 cut(s) 544, 604, 1216
BsmI GAATGC 2 cut(s) 694, 840
BsnI GGCC 4 cut(s) 271, 1296, 1378, 1428
Bso31I GGTCTC 1 cut(s) 384
Bsp119I TTCGAA 1 cut(s) 362
Bsp1286I GDGCHC 1 cut(s) 1136
Bsp1407I TGTACA 1 cut(s) 209
Bsp143I GATC 6 cut(s) 127, 217, 438, 748, 1555, 1614
BspACI CCGC 2 cut(s) 5, 422
BspANI GGCC 4 cut(s) 271, 1296, 1378, 1428
BspCNI CTCAG 4 cut(s) 1091, 1174, 1489, 1494
BspHI TCATGA 2 cut(s) 721, 742
BspLI GGNNCC 3 cut(s) 941, 1531, 1840
BspT104I TTCGAA 1 cut(s) 362
BspTNI GGTCTC 1 cut(s) 384
BsrDI GCAATG 2 cut(s) 721, 1491
BsrFI RCCGGY 1 cut(s) 1328
BsrGI TGTACA 1 cut(s) 209
BsrI ACTGG 4 cut(s) 624, 709, 715, 1842
BssAI RCCGGY 1 cut(s) 1328
BssECI CCNNGG 2 cut(s) 1380, 1429
BssMI GATC 6 cut(s) 127, 217, 438, 748, 1555, 1614
BssNI GRCGYC 1 cut(s) 1337
BssSI CACGAG 1 cut(s) 1129
BssT1I CCWWGG 1 cut(s) 1380
Bst2BI CACGAG 1 cut(s) 1129
Bst2UI CCWGG 3 cut(s) 944, 1262, 1464
Bst4CI ACNGT 3 cut(s) 326, 1626, 1745
Bst6I CTCTTC 4 cut(s) 359, 973, 996, 1590
BstACI GRCGYC 1 cut(s) 1337
BstAPI GCANNNNNTGC 1 cut(s) 1140
BstAUI TGTACA 1 cut(s) 209
BstBI TTCGAA 1 cut(s) 362
BstC8I GCNNGC 4 cut(s) 279, 685, 903, 1837
BstDEI CTNAG 8 cut(s) 502, 906, 1025, 1078, 1161, 1197, 1481, 1497
BstEII GGTNACC 1 cut(s) 1067
BstF5I GGATG 5 cut(s) 592, 1033, 1035, 1512, 1655
BstHHI GCGC 1 cut(s) 1655
BstKTI GATC 6 cut(s) 130, 220, 441, 751, 1558, 1617
BstMAI GTCTC 3 cut(s) 384, 554, 1484
BstMBI GATC 6 cut(s) 127, 217, 438, 748, 1555, 1614
BstMWI GCNNNNNNNGC 4 cut(s) 422, 953, 962, 1140
BstNI CCWGG 3 cut(s) 944, 1262, 1464
BstNSI RCATGY 4 cut(s) 305, 687, 1140, 1479
BstPI GGTNACC 1 cut(s) 1067
BstSCI CCNGG 3 cut(s) 942, 1260, 1462
BstSFI CTRYAG 1 cut(s) 1290
BstSLI GKGCMC 1 cut(s) 1136
BstV1I GCAGC 2 cut(s) 310, 1048
BstV2I GAAGAC 2 cut(s) 1441, 1571
BstX2I RGATCY 1 cut(s) 1614
BstXI CCANNNNNNTGG 2 cut(s) 397, 909
BstYI RGATCY 1 cut(s) 1614
Bsu36I CCTNAGG 1 cut(s) 1197
BsuI GTATCC 2 cut(s) 1411, 1644
BsuRI GGCC 4 cut(s) 271, 1296, 1378, 1428
BtgZI GCGATG 2 cut(s) 1134, 1785
BtsCI GGATG 5 cut(s) 592, 1033, 1035, 1512, 1655
BtsI GCAGTG 1 cut(s) 1877
BtsIMutI CAGTG 1 cut(s) 1877
Cac8I GCNNGC 4 cut(s) 279, 685, 903, 1837
CaiI CAGNNNCTG 2 cut(s) 704, 1469
CciI TCATGA 2 cut(s) 721, 742
CfoI GCGC 1 cut(s) 1655
Cfr10I RCCGGY 1 cut(s) 1328
Cfr13I GGNCC 3 cut(s) 1295, 1326, 1377
CseI GACGC 2 cut(s) 1218, 1326
Csp6I GTAC 7 cut(s) 138, 210, 322, 489, 702, 759, 1622
CspAI ACCGGT 1 cut(s) 1328
CviAII CATG 8 cut(s) 302, 383, 684, 722, 743, 1137, 1476, 1817
CviQI GTAC 7 cut(s) 138, 210, 322, 489, 702, 759, 1622
DdeI CTNAG 8 cut(s) 502, 906, 1025, 1078, 1161, 1197, 1481, 1497
DpnI GATC 6 cut(s) 129, 219, 440, 750, 1557, 1616
DpnII GATC 6 cut(s) 127, 217, 438, 748, 1555, 1614
DrdI GACNNNNNNGTC 1 cut(s) 28
DseDI GACNNNNNNGTC 1 cut(s) 28
EaeI YGGCCR 1 cut(s) 1426
Eam1104I CTCTTC 4 cut(s) 359, 973, 996, 1590
EarI CTCTTC 4 cut(s) 359, 973, 996, 1590
EciI GGCGGA 1 cut(s) 20
Eco130I CCWWGG 1 cut(s) 1380
Eco147I AGGCCT 1 cut(s) 271
Eco31I GGTCTC 1 cut(s) 384
Eco47I GGWCC 1 cut(s) 1326
Eco57I CTGAAG 3 cut(s) 411, 1020, 1614
Eco81I CCTNAGG 1 cut(s) 1197
Eco91I GGTNACC 1 cut(s) 1067
EcoO109I RGGNCCY 1 cut(s) 1295
EcoO65I GGTNACC 1 cut(s) 1067
EcoRI GAATTC 1 cut(s) 1268
EcoRII CCWGG 3 cut(s) 942, 1260, 1462
EcoT14I CCWWGG 1 cut(s) 1380
EcoT22I ATGCAT 3 cut(s) 685, 696, 1035
ErhI CCWWGG 1 cut(s) 1380
FaeI CATG 8 cut(s) 305, 386, 687, 725, 746, 1140, 1479, 1820
FaqI GGGAC 3 cut(s) 544, 604, 1216
FatI CATG 8 cut(s) 301, 382, 683, 721, 742, 1136, 1475, 1816
FbaI TGATCA 3 cut(s) 127, 217, 748
Fnu4HI GCNGC 3 cut(s) 299, 423, 1062
FokI GGATG 5 cut(s) 599, 1020, 1042, 1519, 1642
Fsp4HI GCNGC 3 cut(s) 299, 423, 1062
FspBI CTAG 5 cut(s) 54, 1182, 1361, 1503, 1680
GlaI GCGC 1 cut(s) 1654
GluI GCNGC 3 cut(s) 299, 423, 1062
GsuI CTGGAG 4 cut(s) 578, 760, 995, 1825
HaeIII GGCC 4 cut(s) 271, 1296, 1378, 1428
HapII CCGG 1 cut(s) 1329
HgaI GACGC 2 cut(s) 1218, 1326
HhaI GCGC 1 cut(s) 1655
Hin1I GRCGYC 1 cut(s) 1337
Hin1II CATG 8 cut(s) 305, 386, 687, 725, 746, 1140, 1479, 1820
Hin6I GCGC 1 cut(s) 1653
HinP1I GCGC 1 cut(s) 1653
HindIII AAGCTT 1 cut(s) 735
HinfI GANTC 6 cut(s) 515, 632, 780, 821, 1159, 1608
HpaII CCGG 1 cut(s) 1329
HphI GGTGA 9 cut(s) 188, 263, 302, 623, 884, 1061, 1343, 1577, 1705
Hpy166II GTNNAC 1 cut(s) 1134
Hpy188I TCNGA 7 cut(s) 637, 670, 1081, 1164, 1258, 1342, 1484
Hpy188III TCNNGA 8 cut(s) 519, 722, 743, 777, 831, 853, 1319, 1612
Hpy8I GTNNAC 1 cut(s) 1134
Hpy99I CGWCG 2 cut(s) 731, 819
HpyAV CCTTC 4 cut(s) 516, 595, 1095, 1408
HpyCH4III ACNGT 3 cut(s) 326, 1626, 1745
HpyCH4IV ACGT 1 cut(s) 802
HpyF10VI GCNNNNNNNGC 4 cut(s) 422, 953, 962, 1140
HpyF3I CTNAG 8 cut(s) 502, 906, 1025, 1078, 1161, 1197, 1481, 1497
HpySE526I ACGT 1 cut(s) 802
Hsp92I GRCGYC 1 cut(s) 1337
Hsp92II CATG 8 cut(s) 305, 386, 687, 725, 746, 1140, 1479, 1820
HspAI GCGC 1 cut(s) 1653
Ksp22I TGATCA 3 cut(s) 127, 217, 748
Kzo9I GATC 6 cut(s) 127, 217, 438, 748, 1555, 1614
LmnI GCTCC 4 cut(s) 498, 553, 1201, 1844
Lsp1109I GCAGC 2 cut(s) 310, 1048
LweI GCATC 7 cut(s) 49, 670, 928, 1020, 1042, 1082, 1664
MaeI CTAG 5 cut(s) 54, 1182, 1361, 1503, 1680
MaeII ACGT 1 cut(s) 802
MaeIII GTNAC 5 cut(s) 1005, 1067, 1471, 1733, 1874
MalI GATC 6 cut(s) 129, 219, 440, 750, 1557, 1616
MboI GATC 6 cut(s) 127, 217, 438, 748, 1555, 1614
MfeI CAATTG 2 cut(s) 882, 1422
MflI RGATCY 1 cut(s) 1614
MhlI GDGCHC 1 cut(s) 1136
MlyI GAGTC 3 cut(s) 524, 789, 1153
MmeI TCCRAC 2 cut(s) 444, 564
Mph1103I ATGCAT 3 cut(s) 685, 696, 1035
MslI CAYNNNNRTG 2 cut(s) 1446, 1660
MspA1I CMGCKG 1 cut(s) 1592
MspI CCGG 1 cut(s) 1329
MspR9I CCNGG 3 cut(s) 944, 1262, 1464
MunI CAATTG 2 cut(s) 882, 1422
Mva1269I GAATGC 2 cut(s) 694, 840
MvaI CCWGG 3 cut(s) 944, 1262, 1464
MwoI GCNNNNNNNGC 4 cut(s) 422, 953, 962, 1140
NdeII GATC 6 cut(s) 127, 217, 438, 748, 1555, 1614
NlaIII CATG 8 cut(s) 305, 386, 687, 725, 746, 1140, 1479, 1820
NlaIV GGNNCC 3 cut(s) 941, 1531, 1840
NmeAIII GCCGAG 1 cut(s) 1454
NmuCI GTSAC 2 cut(s) 1067, 1874
NsiI ATGCAT 3 cut(s) 685, 696, 1035
NspI RCATGY 4 cut(s) 305, 687, 1140, 1479
NspV TTCGAA 1 cut(s) 362
PaeI GCATGC 1 cut(s) 687
PagI TCATGA 2 cut(s) 721, 742
PceI AGGCCT 1 cut(s) 271
PciI ACATGT 2 cut(s) 1136, 1475
PctI GAATGC 2 cut(s) 694, 840
PfeI GAWTC 3 cut(s) 632, 821, 1608
PflMI CCANNNNNTGG 1 cut(s) 74
PinAI ACCGGT 1 cut(s) 1328
PkrI GCNGC 3 cut(s) 300, 424, 1063
PleI GAGTC 3 cut(s) 523, 788, 1153
PpsI GAGTC 3 cut(s) 523, 788, 1153
PscI ACATGT 2 cut(s) 1136, 1475
PshBI ATTAAT 2 cut(s) 72, 987
PsiI TTATAA 1 cut(s) 192
Psp6I CCWGG 3 cut(s) 942, 1260, 1462
PspEI GGTNACC 1 cut(s) 1067
PspGI CCWGG 3 cut(s) 942, 1260, 1462
PspN4I GGNNCC 3 cut(s) 941, 1531, 1840
PspPI GGNCC 3 cut(s) 1295, 1326, 1377
PstNI CAGNNNCTG 2 cut(s) 704, 1469
PsuI RGATCY 1 cut(s) 1614
PvuII CAGCTG 1 cut(s) 1592
RsaI GTAC 7 cut(s) 139, 211, 323, 490, 703, 760, 1623
RsaNI GTAC 7 cut(s) 138, 210, 322, 489, 702, 759, 1622
RseI CAYNNNNRTG 2 cut(s) 1446, 1660
SatI GCNGC 3 cut(s) 299, 423, 1062
Sau3AI GATC 6 cut(s) 127, 217, 438, 748, 1555, 1614
Sau96I GGNCC 3 cut(s) 1295, 1326, 1377
SchI GAGTC 3 cut(s) 524, 789, 1153
ScrFI CCNGG 3 cut(s) 944, 1262, 1464
SduI GDGCHC 1 cut(s) 1136
SfaNI GCATC 7 cut(s) 49, 670, 928, 1020, 1042, 1082, 1664
SfcI CTRYAG 1 cut(s) 1290
SfuI TTCGAA 1 cut(s) 362
SinI GGWCC 1 cut(s) 1326
SmiMI CAYNNNNRTG 2 cut(s) 1446, 1660
SpeI ACTAGT 1 cut(s) 53
SphI GCATGC 1 cut(s) 687
SseBI AGGCCT 1 cut(s) 271
SsiI CCGC 2 cut(s) 5, 422
SspI AATATT 1 cut(s) 1057
SspMI CTAG 5 cut(s) 54, 1182, 1361, 1503, 1680
StuI AGGCCT 1 cut(s) 271
StyD4I CCNGG 3 cut(s) 942, 1260, 1462
StyI CCWWGG 1 cut(s) 1380
TaaI ACNGT 3 cut(s) 326, 1626, 1745
TaiI ACGT 1 cut(s) 805
TaqI TCGA 2 cut(s) 362, 783
TaqII GACCGA 1 cut(s) 654
TatI WGTACW 2 cut(s) 209, 321
TauI GCSGC 1 cut(s) 425
TfiI GAWTC 3 cut(s) 632, 821, 1608
TscAI CASTG 1 cut(s) 1877
TseFI GTSAC 2 cut(s) 1067, 1874
TseI GCWGC 2 cut(s) 298, 1061
Tsp45I GTSAC 2 cut(s) 1067, 1874
TspDTI ATGAA 5 cut(s) 527, 614, 1062, 1137, 1523
TspGWI ACGGA 1 cut(s) 1262
TspRI CASTG 1 cut(s) 1877
Van91I CCANNNNNTGG 1 cut(s) 74
VneI GTGCAC 1 cut(s) 1132
VpaK11BI GGWCC 1 cut(s) 1326
VspI ATTAAT 2 cut(s) 72, 987
XapI RAATTY 4 cut(s) 101, 566, 1268, 1572
XceI RCATGY 4 cut(s) 305, 687, 1140, 1479
XspI CTAG 5 cut(s) 54, 1182, 1361, 1503, 1680
Zsp2I ATGCAT 3 cut(s) 685, 696, 1035
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.