Prupe.5G103500_v2.0.a1

AT-rich interactive domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp05
OG0010472
Physical Location & Seq
Reverse (-)
11040125 .. 11044017
3893 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.5G103500.1

Sequence Viewer

Length: 1833 bp
ATGGCAGGATGGTCGTCTTTAACACCTGGGTCTGTTTTAGATTGTGTCGAAACTAATGATGCATATCAGAAAAATGGTAGTTGCATTGGTAGTGATATTGATGTAAGAGATGGTGTTGAATGTGATGAGGATGATGATGAGGTTAGGCTAAGATGTACATTTGATCAAGTTCTATCTGTTTTTGTTAAGGAAATTGGTGATAGAGGTGTTGTTAGGCCCATCCCTGCCGTGATTGACGATAGGCAGCCTGTGGATTTGTTCAAATTGTTCTGTTTGGTGAGAGATAGAGGTGGGTATGATTGGGTTTCGAAGAACAGTTTGTGGTCTTTTGTGGCCAAAGAGTTGGGTTTGGATGGTGGAGCAACGGCTTCTGTGAAATTGATTTACTTCAAGTATTTGAATGAGCTGGAGAAATGGTTTAGGGAGAGTTGTAAAAGTAGGAGCTCCGGAAATGGGCAGTCTGGCTTGTATGGGGAGTTTCAGTTGTCTTCGGAGTTGGAGAGAGAGTTTAGAGATTTGTTGTTGGATGGGCCTGAGCAGAAGGGCAAAGGTGATGGACCGGTTCAGTTTGAATCTGATGAAAATGGGAAGATTGAATTTAATCTTTCAGATACCAAAGATGCATATGGAATGCATGCTGGTGCCGACCAATGCAAGGATGATGATGAAGAAAAAGTTTGTAATGATGATCAGAATGGTGTTTTGATATCACTCGATAGTCTCAATAAAAAAGAAAATGATCGTAAAAGAAAGCGAGAATCCTTATCAGGAATGCTGAATTGGGTAGTTCAGATTGCAAAGCAGCCAAATGATCCTTCAATTGGAGTGATACCAGGGCCAACTAATTGGAGGGAGCATAAGGGCGATGAGTGCTGGTTCCAGGTAATTAGAGCAAGGGAAGCATTGCTGCTAAGAAGGAATGTTGATTCAAAGACTGAAGAATCTCTCCTGCAGAAGAAACTAAAGACGCATCCATTGTTGTATGAAGATAATGTTGTTGCTGGTCACCAGTCCTCAGAGAGGTTAAGATGCAGTGAAAGGTTTCCTAATTCTGTGAAATCTCGCTCGTGCCCTTGTTGCAGTTCATGTTCAGTCCCTCAGAGTAATTTGATAAGTCCTCGTAAAAAAGAGTTGGATAACAATTCTAAGGAGCAAGCACCTGAGGAAGTTGATTTATTGGCCACAAATACAATGGTTTGCCCATCTGTGGATGCTCCCCATGAAAAGCACGTCTCTGTAGGCACTCTCTTTCAAGCTGATGTGCCCGAATGGACTGGCGTGGCTTCTGAAAGTGATATTAAGTGGCTAGGCACACGGGTATGGCCCTTACAATGTGAAGAAGACAGCTCCCTTCATGAAGCAGATCTCACTGGCAAAGGAAGACCAGATTTGTGCGGCTGTCAACTTCCAGGTTCTGTTGTATGTATCAGATTTCACATTGCTGAGGCTAGGATGAAACTGAAGAGAGAACTTGGTTCCTTGTTCTATCGTTGGCGATTTGATCGTATGGGTGAGGAAGTTTCTCTTCAGTGGACAGCTGAAGAAGAAAAGAGATTCAAGGATTTGGTAAAGTCAAATTCTCCTTCCTTTTGGAATAGAGCGTCCAGGTGGTTTCGTAAAAAAACAAGGGAAAACTTGGTAAGCTATTACTTCAATGTGTTTCTTGTCCAAAGCAGAAGTTATCAAAATCGTGTAACTCCAAAAAATATTGATAGTGATGATGATGAAACAGAATTTGGATCATTTAGTAATGGTTTTAGGCATGATGCAGTTGAAGTTTCAGCCAATTTTGAGGCATGTTCCCAGAATCAGCAGTGCACTGATTTGGATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
ARID

Protein Analysis

611

Amino Acids

69.16

Weight (kDa)

5.09

Isoelectric Point (pI)

46.32

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0010472)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G11400 AT4G11400
fragaria_vesca FvH4_5g02760 FvH4_5g02770 FvH4_5g02771 FvH4_5g02772
malus_domestica MD06G1087600.v1.1 MD14G1108400.v1.1
prunus_persica Prupe.5G103500_v2.0.a1
pyrus_communis pycom06g08360 pycom14g10310
rosa_chinensis RchiOBHm_Chr7g0197161
rosa_laevigata RLG00000003956
rosa_multiflora Rmu_ssc0000465.1_g000021
rosa_roxburghii Rroxscaffold_3G00258640
rosa_rugosa Rorug07G0038200
rosa_samantha Rh7AG162900 Rh7BG164900 Rh7CG170900 Rh7DG164300
rosa_wichuraiana Rw7G014220

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 641
AccIII TCCGGA 1 cut(s) 446
AciI CCGC 1 cut(s) 1395
AclWI GGATC 2 cut(s) 806, 1747
AcoI YGGCCR 2 cut(s) 333, 1179
AcsI RAATTY 3 cut(s) 596, 1576, 1733
AcuI CTGAAG 4 cut(s) 957, 1481, 1511, 1560
AfaI GTAC 1 cut(s) 157
AfiI CCNNNNNNNGG 5 cut(s) 453, 655, 821, 1020, 1207
AgeI ACCGGT 1 cut(s) 559
AjiI CACGTC 1 cut(s) 1231
AjnI CCWGG 5 cut(s) 25, 832, 879, 1408, 1604
AjuI GAANNNNNNNTTGG 6 cut(s) 763, 795, 799, 831, 1719, 1751
AluBI AGCT 6 cut(s) 406, 444, 1256, 1347, 1538, 1644
AluI AGCT 6 cut(s) 406, 444, 1256, 1347, 1538, 1644
Alw21I GWGCWC 2 cut(s) 446, 1820
Alw26I GTCTC 2 cut(s) 725, 1237
Alw44I GTGCAC 1 cut(s) 1816
AlwI GGATC 2 cut(s) 806, 1747
AlwNI CAGNNNCTG 1 cut(s) 1415
Aor13HI TCCGGA 1 cut(s) 446
AoxI GGCC 6 cut(s) 215, 333, 530, 836, 1179, 1322
ApaLI GTGCAC 1 cut(s) 1816
ApeKI GCWGC 3 cut(s) 244, 802, 907
ApoI RAATTY 3 cut(s) 596, 1576, 1733
AsiGI ACCGGT 1 cut(s) 559
Asp700I GAANNNNTTC 1 cut(s) 1041
AspS9I GGNCC 5 cut(s) 216, 530, 557, 836, 1323
AsuHPI GGTGA 5 cut(s) 209, 289, 563, 998, 1523
AsuII TTCGAA 1 cut(s) 308
AvaII GGWCC 1 cut(s) 557
AxyI CCTNAGG 1 cut(s) 1161
BaeGI GKGCMC 3 cut(s) 1073, 1266, 1820
BalI TGGCCA 2 cut(s) 335, 1181
BanI GGYRCC 1 cut(s) 641
BanII GRGCYC 1 cut(s) 446
BauI CACGAG 1 cut(s) 1066
BbsI GAAGAC 3 cut(s) 480, 1347, 1387
Bbv12I GWGCWC 2 cut(s) 446, 1820
BbvCI CCTCAGC 1 cut(s) 1443
BbvI GCAGC 3 cut(s) 256, 814, 894
BccI CCATC 7 cut(s) 3, 104, 227, 347, 521, 548, 1210
BceAI ACGGC 2 cut(s) 212, 381
BcgI CGANNNNNNTGC 1 cut(s) 28
BciT130I CCWGG 5 cut(s) 27, 834, 881, 1410, 1606
BclI TGATCA 2 cut(s) 163, 688
BcoDI GTCTC 2 cut(s) 725, 1237
BfaI CTAG 2 cut(s) 1307, 1449
BfmI CTRYAG 2 cut(s) 950, 1236
BglII AGATCT 1 cut(s) 1363
BisI GCNGC 4 cut(s) 245, 803, 908, 1396
BlsI GCNGC 4 cut(s) 246, 804, 909, 1397
Bme1390I CCNGG 5 cut(s) 27, 834, 881, 1410, 1606
Bme18I GGWCC 1 cut(s) 557
BmgBI CACGTC 1 cut(s) 1231
BmgT120I GGNCC 5 cut(s) 216, 530, 557, 836, 1323
BmiI GGNNCC 3 cut(s) 643, 878, 1477
BmrFI CCNGG 5 cut(s) 27, 834, 881, 1410, 1606
BmsI GCATC 6 cut(s) 49, 610, 979, 1019, 1201, 1756
BpiI GAAGAC 3 cut(s) 480, 1347, 1387
BpmI CTGGAG 1 cut(s) 428
Bpu10I CCTNAGC 2 cut(s) 534, 1443
Bpu14I TTCGAA 1 cut(s) 308
BsaBI GATNNNNATC 1 cut(s) 63
BsaJI CCNNGG 2 cut(s) 26, 833
BsaWI WCCGGW 2 cut(s) 446, 559
BsaXI ACNNNNNCTCC 6 cut(s) 401, 431, 467, 491, 497, 521
Bsc4I CCNNNNNNNGG 5 cut(s) 453, 655, 821, 1020, 1207
Bse118I RCCGGY 1 cut(s) 559
Bse1I ACTGG 3 cut(s) 1009, 1279, 1375
Bse21I CCTNAGG 1 cut(s) 1161
Bse3DI GCAATG 2 cut(s) 902, 1437
Bse8I GATNNNNATC 1 cut(s) 63
BseAI TCCGGA 1 cut(s) 446
BseBI CCWGG 5 cut(s) 27, 834, 881, 1410, 1606
BseDI CCNNGG 2 cut(s) 26, 833
BseGI GGATG 9 cut(s) 14, 136, 219, 358, 532, 664, 970, 1216, 1458
BseJI GATNNNNATC 1 cut(s) 63
BseLI CCNNNNNNNGG 5 cut(s) 453, 655, 821, 1020, 1207
BseMI GCAATG 2 cut(s) 902, 1437
BseMII CTCAG 5 cut(s) 525, 1029, 1112, 1152, 1434
BseNI ACTGG 3 cut(s) 1009, 1279, 1375
BseSI GKGCMC 3 cut(s) 1073, 1266, 1820
BseXI GCAGC 3 cut(s) 256, 814, 894
BshFI GGCC 6 cut(s) 217, 335, 532, 838, 1181, 1324
BshNI GGYRCC 1 cut(s) 641
BshTI ACCGGT 1 cut(s) 559
BsiHKAI GWGCWC 2 cut(s) 446, 1820
BsiSI CCGG 2 cut(s) 447, 560
BslFI GGGAC 1 cut(s) 1079
BslI CCNNNNNNNGG 5 cut(s) 453, 655, 821, 1020, 1207
BsmAI GTCTC 2 cut(s) 725, 1237
BsmBI CGTCTC 1 cut(s) 1237
BsmFI GGGAC 1 cut(s) 1079
BsmI GAATGC 2 cut(s) 636, 777
BsnI GGCC 6 cut(s) 217, 335, 532, 838, 1181, 1324
Bsp119I TTCGAA 1 cut(s) 308
Bsp1286I GDGCHC 4 cut(s) 446, 1073, 1266, 1820
Bsp13I TCCGGA 1 cut(s) 446
Bsp1407I TGTACA 1 cut(s) 155
Bsp143I GATC 7 cut(s) 163, 688, 739, 811, 1363, 1501, 1739
BspACI CCGC 1 cut(s) 1395
BspANI GGCC 6 cut(s) 217, 335, 532, 838, 1181, 1324
BspCNI CTCAG 5 cut(s) 526, 1028, 1111, 1153, 1435
BspEI TCCGGA 1 cut(s) 446
BspHI TCATGA 1 cut(s) 1354
BspLI GGNNCC 3 cut(s) 643, 878, 1477
BspMAI CTGCAG 1 cut(s) 954
BspPI GGATC 2 cut(s) 806, 1747
BspT104I TTCGAA 1 cut(s) 308
BspT107I GGYRCC 1 cut(s) 641
BsrDI GCAATG 2 cut(s) 902, 1437
BsrFI RCCGGY 1 cut(s) 559
BsrGI TGTACA 1 cut(s) 155
BsrI ACTGG 3 cut(s) 1009, 1279, 1375
BssAI RCCGGY 1 cut(s) 559
BssECI CCNNGG 2 cut(s) 26, 833
BssMI GATC 7 cut(s) 163, 688, 739, 811, 1363, 1501, 1739
BssSI CACGAG 1 cut(s) 1066
Bst2BI CACGAG 1 cut(s) 1066
Bst2UI CCWGG 5 cut(s) 27, 834, 881, 1410, 1606
Bst4CI ACNGT 1 cut(s) 317
Bst6I CTCTTC 2 cut(s) 1457, 1530
BstAUI TGTACA 1 cut(s) 155
BstBI TTCGAA 1 cut(s) 308
BstC8I GCNNGC 2 cut(s) 636, 1155
BstDEI CTNAG 8 cut(s) 149, 534, 911, 1015, 1098, 1146, 1161, 1443
BstEII GGTNACC 1 cut(s) 1004
BstENI CCTNNNNNAGG 1 cut(s) 1018
BstF5I GGATG 9 cut(s) 14, 136, 219, 358, 532, 664, 970, 1216, 1458
BstKTI GATC 7 cut(s) 166, 691, 742, 814, 1366, 1504, 1742
BstMAI GTCTC 2 cut(s) 725, 1237
BstMBI GATC 7 cut(s) 163, 688, 739, 811, 1363, 1501, 1739
BstMWI GCNNNNNNNGC 3 cut(s) 870, 899, 1077
BstNI CCWGG 5 cut(s) 27, 834, 881, 1410, 1606
BstNSI RCATGY 2 cut(s) 638, 1800
BstPI GGTNACC 1 cut(s) 1004
BstSCI CCNGG 5 cut(s) 25, 832, 879, 1408, 1604
BstSFI CTRYAG 2 cut(s) 950, 1236
BstSLI GKGCMC 3 cut(s) 1073, 1266, 1820
BstV1I GCAGC 3 cut(s) 256, 814, 894
BstV2I GAAGAC 3 cut(s) 480, 1347, 1387
BstX2I RGATCY 1 cut(s) 1363
BstXI CCANNNNNNTGG 2 cut(s) 343, 846
BstYI RGATCY 1 cut(s) 1363
Bsu36I CCTNAGG 1 cut(s) 1161
BsuRI GGCC 6 cut(s) 217, 335, 532, 838, 1181, 1324
BtgZI GCGATG 1 cut(s) 879
BtrI CACGTC 1 cut(s) 1231
BtsCI GGATG 9 cut(s) 14, 136, 219, 358, 532, 664, 970, 1216, 1458
BtsI GCAGTG 2 cut(s) 1039, 1820
BtsIMutI CAGTG 5 cut(s) 1039, 1368, 1535, 1818, 1820
Cac8I GCNNGC 2 cut(s) 636, 1155
CaiI CAGNNNCTG 1 cut(s) 1415
CciI TCATGA 1 cut(s) 1354
Cfr10I RCCGGY 1 cut(s) 559
Cfr13I GGNCC 5 cut(s) 216, 530, 557, 836, 1323
CseI GACGC 2 cut(s) 976, 1590
Csp6I GTAC 1 cut(s) 156
CspAI ACCGGT 1 cut(s) 559
CviAII CATG 6 cut(s) 635, 1086, 1220, 1355, 1763, 1797
CviQI GTAC 1 cut(s) 156
DdeI CTNAG 8 cut(s) 149, 534, 911, 1015, 1098, 1146, 1161, 1443
DpnI GATC 7 cut(s) 165, 690, 741, 813, 1365, 1503, 1741
DpnII GATC 7 cut(s) 163, 688, 739, 811, 1363, 1501, 1739
EaeI YGGCCR 2 cut(s) 333, 1179
Eam1104I CTCTTC 2 cut(s) 1457, 1530
EarI CTCTTC 2 cut(s) 1457, 1530
Ecl136II GAGCTC 1 cut(s) 444
Eco24I GRGCYC 1 cut(s) 446
Eco32I GATATC 1 cut(s) 708
Eco47I GGWCC 1 cut(s) 557
Eco53kI GAGCTC 1 cut(s) 444
Eco57I CTGAAG 4 cut(s) 957, 1481, 1511, 1560
Eco81I CCTNAGG 1 cut(s) 1161
Eco91I GGTNACC 1 cut(s) 1004
EcoICRI GAGCTC 1 cut(s) 444
EcoNI CCTNNNNNAGG 1 cut(s) 1018
EcoO65I GGTNACC 1 cut(s) 1004
EcoRII CCWGG 5 cut(s) 25, 832, 879, 1408, 1604
EcoRV GATATC 1 cut(s) 708
EcoT22I ATGCAT 3 cut(s) 64, 625, 636
EcoT38I GRGCYC 1 cut(s) 446
Esp3I CGTCTC 1 cut(s) 1237
FaeI CATG 6 cut(s) 638, 1089, 1223, 1358, 1766, 1800
FalI AAGNNNNNCTT 2 cut(s) 1509, 1541
FaqI GGGAC 1 cut(s) 1079
FatI CATG 6 cut(s) 634, 1085, 1219, 1354, 1762, 1796
FauNDI CATATG 1 cut(s) 625
FbaI TGATCA 2 cut(s) 163, 688
Fnu4HI GCNGC 4 cut(s) 245, 803, 908, 1396
FokI GGATG 9 cut(s) 21, 143, 206, 365, 539, 671, 957, 1223, 1465
FriOI GRGCYC 1 cut(s) 446
Fsp4HI GCNGC 4 cut(s) 245, 803, 908, 1396
FspBI CTAG 2 cut(s) 1307, 1449
GluI GCNGC 4 cut(s) 245, 803, 908, 1396
GsuI CTGGAG 1 cut(s) 428
HaeIII GGCC 6 cut(s) 217, 335, 532, 838, 1181, 1324
HapII CCGG 2 cut(s) 447, 560
HgaI GACGC 2 cut(s) 976, 1590
Hin1II CATG 6 cut(s) 638, 1089, 1223, 1358, 1766, 1800
HincII GTYRAC 1 cut(s) 1403
HindII GTYRAC 1 cut(s) 1403
HinfI GANTC 6 cut(s) 572, 758, 926, 941, 1554, 1807
HpaII CCGG 2 cut(s) 447, 560
HphI GGTGA 5 cut(s) 209, 289, 563, 998, 1523
Hpy166II GTNNAC 3 cut(s) 1403, 1533, 1818
Hpy188III TCNNGA 3 cut(s) 447, 768, 1355
Hpy8I GTNNAC 3 cut(s) 1403, 1533, 1818
HpyAV CCTTC 5 cut(s) 535, 825, 909, 1361, 1593
HpyCH4III ACNGT 1 cut(s) 317
HpyCH4IV ACGT 1 cut(s) 1230
HpyF10VI GCNNNNNNNGC 3 cut(s) 870, 899, 1077
HpyF3I CTNAG 8 cut(s) 149, 534, 911, 1015, 1098, 1146, 1161, 1443
HpySE526I ACGT 1 cut(s) 1230
Hsp92II CATG 6 cut(s) 638, 1089, 1223, 1358, 1766, 1800
Kpn2I TCCGGA 1 cut(s) 446
Ksp22I TGATCA 2 cut(s) 163, 688
Kzo9I GATC 7 cut(s) 163, 688, 739, 811, 1363, 1501, 1739
LmnI GCTCC 7 cut(s) 359, 441, 449, 853, 1150, 1219, 1352
Lsp1109I GCAGC 3 cut(s) 256, 814, 894
LweI GCATC 6 cut(s) 49, 610, 979, 1019, 1201, 1756
MaeI CTAG 2 cut(s) 1307, 1449
MaeII ACGT 1 cut(s) 1230
MaeIII GTNAC 2 cut(s) 1004, 1693
MalI GATC 7 cut(s) 165, 690, 741, 813, 1365, 1503, 1741
MboI GATC 7 cut(s) 163, 688, 739, 811, 1363, 1501, 1739
MfeI CAATTG 1 cut(s) 819
MflI RGATCY 1 cut(s) 1363
MhlI GDGCHC 4 cut(s) 446, 1073, 1266, 1820
MlsI TGGCCA 2 cut(s) 335, 1181
MluNI TGGCCA 2 cut(s) 335, 1181
MmeI TCCRAC 3 cut(s) 477, 504, 1113
Mox20I TGGCCA 2 cut(s) 335, 1181
Mph1103I ATGCAT 3 cut(s) 64, 625, 636
MroI TCCGGA 1 cut(s) 446
MroXI GAANNNNTTC 1 cut(s) 1041
MscI TGGCCA 2 cut(s) 335, 1181
MseI TTAA 5 cut(s) 20, 186, 600, 1025, 1299
MslI CAYNNNNRTG 2 cut(s) 639, 1318
Msp20I TGGCCA 2 cut(s) 335, 1181
MspA1I CMGCKG 1 cut(s) 1538
MspI CCGG 2 cut(s) 447, 560
MspR9I CCNGG 5 cut(s) 27, 834, 881, 1410, 1606
MunI CAATTG 1 cut(s) 819
Mva1269I GAATGC 2 cut(s) 636, 777
MvaI CCWGG 5 cut(s) 27, 834, 881, 1410, 1606
MwoI GCNNNNNNNGC 3 cut(s) 870, 899, 1077
NdeI CATATG 1 cut(s) 625
NdeII GATC 7 cut(s) 163, 688, 739, 811, 1363, 1501, 1739
NlaIII CATG 6 cut(s) 638, 1089, 1223, 1358, 1766, 1800
NlaIV GGNNCC 3 cut(s) 643, 878, 1477
NmuCI GTSAC 1 cut(s) 1004
NsiI ATGCAT 3 cut(s) 64, 625, 636
NspI RCATGY 2 cut(s) 638, 1800
NspV TTCGAA 1 cut(s) 308
PaeI GCATGC 1 cut(s) 638
PagI TCATGA 1 cut(s) 1354
PctI GAATGC 2 cut(s) 636, 777
PdmI GAANNNNTTC 1 cut(s) 1041
PfeI GAWTC 6 cut(s) 572, 758, 926, 941, 1554, 1807
PinAI ACCGGT 1 cut(s) 559
PkrI GCNGC 4 cut(s) 246, 804, 909, 1397
Psp124BI GAGCTC 1 cut(s) 446
Psp6I CCWGG 5 cut(s) 25, 832, 879, 1408, 1604
PspEI GGTNACC 1 cut(s) 1004
PspGI CCWGG 5 cut(s) 25, 832, 879, 1408, 1604
PspN4I GGNNCC 3 cut(s) 643, 878, 1477
PspPI GGNCC 5 cut(s) 216, 530, 557, 836, 1323
PstI CTGCAG 1 cut(s) 954
PstNI CAGNNNCTG 1 cut(s) 1415
PsuI RGATCY 1 cut(s) 1363
PvuII CAGCTG 1 cut(s) 1538
RsaI GTAC 1 cut(s) 157
RsaNI GTAC 1 cut(s) 156
RseI CAYNNNNRTG 2 cut(s) 639, 1318
SacI GAGCTC 1 cut(s) 446
SaqAI TTAA 5 cut(s) 20, 186, 600, 1025, 1299
SatI GCNGC 4 cut(s) 245, 803, 908, 1396
Sau3AI GATC 7 cut(s) 163, 688, 739, 811, 1363, 1501, 1739
Sau96I GGNCC 5 cut(s) 216, 530, 557, 836, 1323
ScrFI CCNGG 5 cut(s) 27, 834, 881, 1410, 1606
SduI GDGCHC 4 cut(s) 446, 1073, 1266, 1820
SfaNI GCATC 6 cut(s) 49, 610, 979, 1019, 1201, 1756
SfcI CTRYAG 2 cut(s) 950, 1236
SfuI TTCGAA 1 cut(s) 308
SinI GGWCC 1 cut(s) 557
SmiMI CAYNNNNRTG 2 cut(s) 639, 1318
SphI GCATGC 1 cut(s) 638
SsiI CCGC 1 cut(s) 1395
SspI AATATT 1 cut(s) 1708
SspMI CTAG 2 cut(s) 1307, 1449
SstI GAGCTC 1 cut(s) 446
StyD4I CCNGG 5 cut(s) 25, 832, 879, 1408, 1604
TaaI ACNGT 1 cut(s) 317
TaiI ACGT 1 cut(s) 1233
TaqI TCGA 3 cut(s) 48, 308, 714
TatI WGTACW 1 cut(s) 155
TauI GCSGC 1 cut(s) 1398
TfiI GAWTC 6 cut(s) 572, 758, 926, 941, 1554, 1807
Tru1I TTAA 5 cut(s) 20, 186, 600, 1025, 1299
Tru9I TTAA 5 cut(s) 20, 186, 600, 1025, 1299
TscAI CASTG 5 cut(s) 1039, 1375, 1535, 1820, 1825
TseFI GTSAC 1 cut(s) 1004
TseI GCWGC 3 cut(s) 244, 802, 907
Tsp45I GTSAC 1 cut(s) 1004
TspDTI ATGAA 9 cut(s) 594, 681, 999, 1074, 1236, 1343, 1371, 1469, 1740
TspRI CASTG 5 cut(s) 1039, 1375, 1535, 1820, 1825
VneI GTGCAC 1 cut(s) 1816
VpaK11BI GGWCC 1 cut(s) 557
XagI CCTNNNNNAGG 1 cut(s) 1018
XapI RAATTY 3 cut(s) 596, 1576, 1733
XceI RCATGY 2 cut(s) 638, 1800
XcmI CCANNNNNNNNNTGG 1 cut(s) 1189
XmnI GAANNNNTTC 1 cut(s) 1041
XspI CTAG 2 cut(s) 1307, 1449
Zsp2I ATGCAT 3 cut(s) 64, 625, 636
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.