Rh7CG170900

AT-rich interactive domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7C
OG0010472
Physical Location & Seq
Forward (+)
14387219 .. 14391680
4462 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7CG170900.1

Sequence Viewer

Length: 1920 bp
ATGGCAGGATGGTCAGTTTCGACAAATGGGTCCGTGTTAGATTTGGCTGAGATTACTGATGCTAATCCAATTAATGGTGATAGTCTTGGTAGTGGTATTGAATCTGTAAAAGATGGTGTAGAATGTGGCGGTGATGATGATGATGATCATAAGGTTGATACTGTAAAAGATGGTGTAGAATGTGTTGATGATGATTATAGGGGTAGGCAGAGATGTACATTTGATCAGGTTCTATCTGTTTTTCTCAAGGATATTGGTGATAGAGGTGTTGTTAGGCCTGTGCCTGCAGTTTTTGGTGATAGGCAACATGTGGATTTGTTCAACTTGTTCTGTGTTGTGAGAGATAAAGGTGGGTATGATTTGGTTTCAAACAAGAGGCTGTGGTCTTTTGTGTCCAAAGAATTGGGCTTGGATGGTGGAGCAACGGCGGCTTCTGTAAAATTGATCTACTTCAAGTATTTGAACGAGTTGGAGATATGGTTTAGGGAGAGTTGTACGAGTAGGAGCTTGGGAAATGGGGAGTCTGGAAGGTATGGGACTTCTCATTTGTTGTCTTTGGAGCTAGAGAGAGAGTTTAGAGGTTTTTTGTTGGACGGGACAGAGCAGAAGGACAATGGTGATGGACTGGTTCATTTGGAATCTGACCAAAATGGGAAGATTGAATATAGTTTATCAGATACCAAAGATGCATGTACAATGCATTCAGGTACTGGAACTTGCAATGGTGATGACGACGAAAATGTTTGTAATGATGATCAAAATGGTACCTTGATATTACCCTCCAGTGTCGATAATAAAGAAATCGATCGTAAAAGAAAGCGACGAGAATCCTTATCAGGAATGCTGAATTGGGTAATCCAGACAGCAACACAAGTTGGTGCTGCTTCAATTGGAGTGATACCAGGGCCAGCTAAGTGGGACAAGCATGAAGGCAACGAGTTCTGGTTCCAGGCAATTAAAGCAAGGGAGGCATTGATGCTAAAAAGAGATATTACTCCAAAGACTGAAGAAATACTCCAGCAGAAGAAACTAAGGATGCATCCTTTGATGTATGAAGATACTATTGCTGCTGGTCACCATTCCTCAGAGAGGTTAAGATGCAGAGGAAGGATTCCTCAGTCTACTAAATCTCGCTCGTGCACTTGTTGCAATTCTTTGCCGCCAACTCAGAGTAATTCGATAAGTCCTCACATGGTGTTGCATGACGATTCTAAGGAGCAAGAACCTATGGAAGTTGATTTAGCCTCTCCACATAGATCGGTTATCCCATCTGACGATGATGAATCCCGTGAAAAGTATGTTTCTGTGGGCCCTCTCTCTCAAGCTGATGTTCCTGAATGGACTGATGTGGCCTCAGAAAGTGATAGTAAATGGCTAGGCACAAGGGTATGGCCCTTGCAATGTGAGGAAGACAATTCCCTTGTTGAAACAGATATCATTGGCCGAGGAAGACCAGATTCCTGTGGCTGTCAGCTTCCAGGTTCTGTTACATGTCATAGATTTCACATTGCTGAGGCTAGGATGAAACTGAAGAAAGAACTCGGTTCCTTGTTCTATCACTGGAGATTTGATCGTATGGGAGAGGAAATTTCTCTTCAGTGGACAGCTGAAGAGGAAAAGAGATTCAAGACCTTGGTACAGTCAAAGTATCCTTTCTTTTGGAATAGTGCATCCAAGTGGTTTCCCAGAAAAACTAGGGAAAACTTGGTGAGCTATTACTTCAACGTGTTTCTTGTTAAGCGAAGAAGTTATCAGAACCGAGTAACTCCTAAAAATATAGATAGCGATGATGACGAAACAGATTTTGGGTCTTTAAGTGAGGGTTTTGGGCACGAGGCAGTCAAAGTTTCAGGCTCCAATTTTCTGGCCTGTTCCCAGAATAAGCAGTGTGACGACTTGGATGATAAAAATGCTATATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
ARID

Protein Analysis

639

Amino Acids

71.77

Weight (kDa)

5.12

Isoelectric Point (pI)

46.63

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ARID PF01388 74 - 156 2.5e-11 ARID/BRIGHT DNA binding domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0010472)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G11400 AT4G11400
fragaria_vesca FvH4_5g02760 FvH4_5g02770 FvH4_5g02771 FvH4_5g02772
malus_domestica MD06G1087600.v1.1 MD14G1108400.v1.1
prunus_persica Prupe.5G103500_v2.0.a1
pyrus_communis pycom06g08360 pycom14g10310
rosa_chinensis RchiOBHm_Chr7g0197161
rosa_laevigata RLG00000003956
rosa_multiflora Rmu_ssc0000465.1_g000021
rosa_roxburghii Rroxscaffold_3G00258640
rosa_rugosa Rorug07G0038200
rosa_samantha Rh7AG162900 Rh7BG164900 Rh7CG170900 Rh7DG164300
rosa_wichuraiana Rw7G014220

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 28
Acc65I GGTACC 1 cut(s) 764
AccB1I GGYRCC 1 cut(s) 764
AccB7I CCANNNNNTGG 1 cut(s) 74
AccI GTMKAC 1 cut(s) 1121
AciI CCGC 3 cut(s) 129, 428, 1160
AcoI YGGCCR 1 cut(s) 1441
AcsI RAATTY 1 cut(s) 1587
AcuI CTGAAG 4 cut(s) 1026, 1550, 1580, 1629
AdeI CACNNNGTG 1 cut(s) 1195
AfaI GTAC 6 cut(s) 217, 496, 694, 709, 766, 1638
AfiI CCNNNNNNNGG 2 cut(s) 74, 1089
AflIII ACRYGT 3 cut(s) 307, 1490, 1725
AjnI CCWGG 3 cut(s) 901, 948, 1477
AjuI GAANNNNNNNTTGG 4 cut(s) 832, 864, 1788, 1820
AluBI AGCT 7 cut(s) 507, 562, 911, 1325, 1474, 1607, 1713
AluI AGCT 7 cut(s) 507, 562, 911, 1325, 1474, 1607, 1713
Alw21I GWGCWC 1 cut(s) 1142
Alw44I GTGCAC 1 cut(s) 1138
AlwNI CAGNNNCTG 2 cut(s) 710, 1484
AoxI GGCC 7 cut(s) 275, 905, 1309, 1350, 1391, 1441, 1866
ApaI GGGCCC 1 cut(s) 1313
ApaLI GTGCAC 1 cut(s) 1138
ApeKI GCWGC 2 cut(s) 881, 1067
ApoI RAATTY 1 cut(s) 1587
ArsI GACNNNNNNTTYG 2 cut(s) 529, 561
AseI ATTAAT 1 cut(s) 72
Asp718I GGTACC 1 cut(s) 764
AspS9I GGNCC 5 cut(s) 30, 905, 1309, 1310, 1392
AsuHPI GGTGA 8 cut(s) 89, 143, 269, 308, 629, 737, 1067, 1720
AvaII GGWCC 1 cut(s) 30
BaeGI GKGCMC 3 cut(s) 1142, 1313, 1833
BanI GGYRCC 1 cut(s) 764
BanII GRGCYC 1 cut(s) 1313
BauI CACGAG 2 cut(s) 1135, 1832
BbsI GAAGAC 2 cut(s) 1416, 1456
Bbv12I GWGCWC 1 cut(s) 1142
BbvCI CCTCAGC 1 cut(s) 1512
BbvI GCAGC 2 cut(s) 868, 1054
BccI CCATC 6 cut(s) 3, 107, 164, 407, 614, 1276
BceAI ACGGC 1 cut(s) 441
BciT130I CCWGG 3 cut(s) 903, 950, 1479
BciVI GTATCC 1 cut(s) 1659
BclI TGATCA 3 cut(s) 145, 223, 754
BfaI CTAG 4 cut(s) 563, 1376, 1518, 1695
BfmI CTRYAG 1 cut(s) 285
BfuI GTATCC 1 cut(s) 1659
BisI GCNGC 4 cut(s) 429, 882, 1068, 1160
BlsI GCNGC 4 cut(s) 430, 883, 1069, 1161
Bme1390I CCNGG 3 cut(s) 903, 950, 1479
Bme18I GGWCC 1 cut(s) 30
BmgT120I GGNCC 5 cut(s) 30, 905, 1309, 1310, 1392
BmiI GGNNCC 6 cut(s) 31, 766, 947, 1311, 1546, 1855
BmrFI CCNGG 3 cut(s) 903, 950, 1479
BmsI GCATC 7 cut(s) 49, 676, 966, 1026, 1048, 1088, 1679
BpiI GAAGAC 2 cut(s) 1416, 1456
BpmI CTGGAG 3 cut(s) 766, 1001, 1582
Bpu10I CCTNAGC 1 cut(s) 1512
BpuEI CTTGAG 2 cut(s) 230, 1305
Bsa29I ATCGAT 1 cut(s) 804
BsaBI GATNNNNATC 2 cut(s) 63, 144
BsaJI CCNNGG 3 cut(s) 902, 1444, 1632
BsaXI ACNNNNNCTCC 2 cut(s) 464, 494
Bsc4I CCNNNNNNNGG 2 cut(s) 74, 1089
Bse1I ACTGG 4 cut(s) 630, 715, 783, 1565
Bse3DI GCAATG 3 cut(s) 727, 1406, 1506
Bse8I GATNNNNATC 2 cut(s) 63, 144
BseBI CCWGG 3 cut(s) 903, 950, 1479
BseCI ATCGAT 1 cut(s) 804
BseDI CCNNGG 3 cut(s) 902, 1444, 1632
BseGI GGATG 7 cut(s) 14, 418, 1039, 1041, 1527, 1670, 1906
BseJI GATNNNNATC 2 cut(s) 63, 144
BseLI CCNNNNNNNGG 2 cut(s) 74, 1089
BseMI GCAATG 3 cut(s) 727, 1406, 1506
BseMII CTCAG 6 cut(s) 39, 1098, 1130, 1181, 1368, 1503
BseNI ACTGG 4 cut(s) 630, 715, 783, 1565
BseSI GKGCMC 3 cut(s) 1142, 1313, 1833
BseXI GCAGC 2 cut(s) 868, 1054
Bsh1285I CGRYCG 1 cut(s) 808
BshFI GGCC 7 cut(s) 277, 907, 1311, 1352, 1393, 1443, 1868
BshNI GGYRCC 1 cut(s) 764
BshVI ATCGAT 1 cut(s) 804
BsiEI CGRYCG 1 cut(s) 808
BsiHKAI GWGCWC 1 cut(s) 1142
BslFI GGGAC 3 cut(s) 550, 610, 932
BslI CCNNNNNNNGG 2 cut(s) 74, 1089
BsmFI GGGAC 3 cut(s) 550, 610, 932
BsmI GAATGC 2 cut(s) 700, 846
BsnI GGCC 7 cut(s) 277, 907, 1311, 1352, 1393, 1443, 1868
Bsp120I GGGCCC 1 cut(s) 1309
Bsp1286I GDGCHC 3 cut(s) 1142, 1313, 1833
Bsp1407I TGTACA 2 cut(s) 215, 692
Bsp143I GATC 7 cut(s) 145, 223, 444, 754, 805, 1256, 1570
BspACI CCGC 3 cut(s) 129, 428, 1160
BspANI GGCC 7 cut(s) 277, 907, 1311, 1352, 1393, 1443, 1868
BspCNI CTCAG 6 cut(s) 40, 1097, 1129, 1180, 1367, 1504
BspDI ATCGAT 1 cut(s) 804
BspLI GGNNCC 6 cut(s) 31, 766, 947, 1311, 1546, 1855
BspMAI CTGCAG 1 cut(s) 289
BspT107I GGYRCC 1 cut(s) 764
BsrDI GCAATG 3 cut(s) 727, 1406, 1506
BsrGI TGTACA 2 cut(s) 215, 692
BsrI ACTGG 4 cut(s) 630, 715, 783, 1565
BssECI CCNNGG 3 cut(s) 902, 1444, 1632
BssMI GATC 7 cut(s) 145, 223, 444, 754, 805, 1256, 1570
BssSI CACGAG 2 cut(s) 1135, 1832
BssT1I CCWWGG 1 cut(s) 1632
Bst2BI CACGAG 2 cut(s) 1135, 1832
Bst2UI CCWGG 3 cut(s) 903, 950, 1479
Bst4CI ACNGT 2 cut(s) 163, 1641
Bst6I CTCTTC 2 cut(s) 1599, 1605
BstAPI GCANNNNNTGC 1 cut(s) 1146
BstAUI TGTACA 2 cut(s) 215, 692
BstC8I GCNNGC 2 cut(s) 285, 909
BstDEI CTNAG 9 cut(s) 48, 912, 1031, 1084, 1116, 1167, 1212, 1354, 1512
BstEII GGTNACC 1 cut(s) 1073
BstENI CCTNNNNNAGG 1 cut(s) 1087
BstF5I GGATG 7 cut(s) 14, 418, 1039, 1041, 1527, 1670, 1906
BstKTI GATC 7 cut(s) 148, 226, 447, 757, 808, 1259, 1573
BstMBI GATC 7 cut(s) 145, 223, 444, 754, 805, 1256, 1570
BstMCI CGRYCG 1 cut(s) 808
BstMWI GCNNNNNNNGC 4 cut(s) 428, 959, 968, 1146
BstNI CCWGG 3 cut(s) 903, 950, 1479
BstNSI RCATGY 3 cut(s) 311, 693, 1494
BstPI GGTNACC 1 cut(s) 1073
BstSCI CCNGG 3 cut(s) 901, 948, 1477
BstSFI CTRYAG 1 cut(s) 285
BstSLI GKGCMC 3 cut(s) 1142, 1313, 1833
BstV1I GCAGC 2 cut(s) 868, 1054
BstV2I GAAGAC 2 cut(s) 1416, 1456
BstXI CCANNNNNNTGG 3 cut(s) 403, 915, 1864
Bsu15I ATCGAT 1 cut(s) 804
BsuI GTATCC 1 cut(s) 1659
BsuRI GGCC 7 cut(s) 277, 907, 1311, 1352, 1393, 1443, 1868
BsuTUI ATCGAT 1 cut(s) 804
BtgZI GCGATG 1 cut(s) 1800
BtsCI GGATG 7 cut(s) 14, 418, 1039, 1041, 1527, 1670, 1906
BtsI GCAGTG 1 cut(s) 1892
BtsIMutI CAGTG 4 cut(s) 790, 1558, 1604, 1892
Cac8I GCNNGC 2 cut(s) 285, 909
CaiI CAGNNNCTG 2 cut(s) 710, 1484
Cfr13I GGNCC 5 cut(s) 30, 905, 1309, 1310, 1392
ClaI ATCGAT 1 cut(s) 804
Csp6I GTAC 6 cut(s) 216, 495, 693, 708, 765, 1637
CviAII CATG 6 cut(s) 308, 690, 926, 1192, 1202, 1491
CviQI GTAC 6 cut(s) 216, 495, 693, 708, 765, 1637
DdeI CTNAG 9 cut(s) 48, 912, 1031, 1084, 1116, 1167, 1212, 1354, 1512
DpnI GATC 7 cut(s) 147, 225, 446, 756, 807, 1258, 1572
DpnII GATC 7 cut(s) 145, 223, 444, 754, 805, 1256, 1570
DraIII CACNNNGTG 1 cut(s) 1195
DrdI GACNNNNNNGTC 1 cut(s) 28
DseDI GACNNNNNNGTC 1 cut(s) 28
EaeI YGGCCR 1 cut(s) 1441
Eam1104I CTCTTC 2 cut(s) 1599, 1605
EarI CTCTTC 2 cut(s) 1599, 1605
Eco130I CCWWGG 1 cut(s) 1632
Eco147I AGGCCT 1 cut(s) 277
Eco24I GRGCYC 1 cut(s) 1313
Eco32I GATATC 1 cut(s) 1435
Eco47I GGWCC 1 cut(s) 30
Eco57I CTGAAG 4 cut(s) 1026, 1550, 1580, 1629
Eco91I GGTNACC 1 cut(s) 1073
EcoNI CCTNNNNNAGG 1 cut(s) 1087
EcoO109I RGGNCCY 1 cut(s) 1310
EcoO65I GGTNACC 1 cut(s) 1073
EcoRII CCWGG 3 cut(s) 901, 948, 1477
EcoRV GATATC 1 cut(s) 1435
EcoT14I CCWWGG 1 cut(s) 1632
EcoT22I ATGCAT 3 cut(s) 691, 702, 1041
EcoT38I GRGCYC 1 cut(s) 1313
ErhI CCWWGG 1 cut(s) 1632
FaeI CATG 6 cut(s) 311, 693, 929, 1195, 1205, 1494
FaqI GGGAC 3 cut(s) 550, 610, 932
FatI CATG 6 cut(s) 307, 689, 925, 1191, 1201, 1490
FbaI TGATCA 3 cut(s) 145, 223, 754
FblI GTMKAC 1 cut(s) 1121
Fnu4HI GCNGC 4 cut(s) 429, 882, 1068, 1160
FokI GGATG 7 cut(s) 21, 425, 1026, 1048, 1534, 1657, 1913
FriOI GRGCYC 1 cut(s) 1313
Fsp4HI GCNGC 4 cut(s) 429, 882, 1068, 1160
FspBI CTAG 4 cut(s) 563, 1376, 1518, 1695
GluI GCNGC 4 cut(s) 429, 882, 1068, 1160
GsuI CTGGAG 3 cut(s) 766, 1001, 1582
HaeIII GGCC 7 cut(s) 277, 907, 1311, 1352, 1393, 1443, 1868
Hin1II CATG 6 cut(s) 311, 693, 929, 1195, 1205, 1494
HinfI GANTC 9 cut(s) 101, 521, 638, 827, 1111, 1208, 1283, 1457, 1623
HphI GGTGA 8 cut(s) 89, 143, 269, 308, 629, 737, 1067, 1720
Hpy166II GTNNAC 3 cut(s) 1122, 1140, 1602
Hpy188I TCNGA 7 cut(s) 643, 676, 1087, 1170, 1273, 1357, 1755
Hpy188III TCNNGA 5 cut(s) 525, 837, 859, 1334, 1627
Hpy8I GTNNAC 3 cut(s) 1122, 1140, 1602
Hpy99I CGWCG 2 cut(s) 737, 825
HpyAV CCTTC 4 cut(s) 522, 601, 923, 1101
HpyCH4III ACNGT 2 cut(s) 163, 1641
HpyCH4IV ACGT 1 cut(s) 1725
HpyF10VI GCNNNNNNNGC 4 cut(s) 428, 959, 968, 1146
HpyF3I CTNAG 9 cut(s) 48, 912, 1031, 1084, 1116, 1167, 1212, 1354, 1512
HpySE526I ACGT 1 cut(s) 1725
Hsp92II CATG 6 cut(s) 311, 693, 929, 1195, 1205, 1494
KpnI GGTACC 1 cut(s) 768
Ksp22I TGATCA 3 cut(s) 145, 223, 754
Kzo9I GATC 7 cut(s) 145, 223, 444, 754, 805, 1256, 1570
LmnI GCTCC 5 cut(s) 419, 504, 559, 1216, 1859
Lsp1109I GCAGC 2 cut(s) 868, 1054
LweI GCATC 7 cut(s) 49, 676, 966, 1026, 1048, 1088, 1679
MaeI CTAG 4 cut(s) 563, 1376, 1518, 1695
MaeII ACGT 1 cut(s) 1725
MaeIII GTNAC 4 cut(s) 1073, 1486, 1762, 1889
MalI GATC 7 cut(s) 147, 225, 446, 756, 807, 1258, 1572
MboI GATC 7 cut(s) 145, 223, 444, 754, 805, 1256, 1570
MfeI CAATTG 1 cut(s) 888
MhlI GDGCHC 3 cut(s) 1142, 1313, 1833
MlyI GAGTC 1 cut(s) 530
MmeI TCCRAC 2 cut(s) 450, 570
Mph1103I ATGCAT 3 cut(s) 691, 702, 1041
MseI TTAA 5 cut(s) 72, 957, 1094, 1737, 1814
MslI CAYNNNNRTG 1 cut(s) 1675
MspA1I CMGCKG 1 cut(s) 1607
MspR9I CCNGG 3 cut(s) 903, 950, 1479
MunI CAATTG 1 cut(s) 888
Mva1269I GAATGC 2 cut(s) 700, 846
MvaI CCWGG 3 cut(s) 903, 950, 1479
MwoI GCNNNNNNNGC 4 cut(s) 428, 959, 968, 1146
NdeII GATC 7 cut(s) 145, 223, 444, 754, 805, 1256, 1570
NlaIII CATG 6 cut(s) 311, 693, 929, 1195, 1205, 1494
NlaIV GGNNCC 6 cut(s) 31, 766, 947, 1311, 1546, 1855
NmeAIII GCCGAG 1 cut(s) 1469
NmuCI GTSAC 2 cut(s) 1073, 1889
NsiI ATGCAT 3 cut(s) 691, 702, 1041
NspI RCATGY 3 cut(s) 311, 693, 1494
PceI AGGCCT 1 cut(s) 277
PciI ACATGT 2 cut(s) 307, 1490
PctI GAATGC 2 cut(s) 700, 846
PfeI GAWTC 8 cut(s) 101, 638, 827, 1111, 1208, 1283, 1457, 1623
PflMI CCANNNNNTGG 1 cut(s) 74
PkrI GCNGC 4 cut(s) 430, 883, 1069, 1161
Ple19I CGATCG 1 cut(s) 808
PleI GAGTC 1 cut(s) 529
PpsI GAGTC 1 cut(s) 529
PscI ACATGT 2 cut(s) 307, 1490
PshBI ATTAAT 1 cut(s) 72
Psp6I CCWGG 3 cut(s) 901, 948, 1477
PspEI GGTNACC 1 cut(s) 1073
PspGI CCWGG 3 cut(s) 901, 948, 1477
PspN4I GGNNCC 6 cut(s) 31, 766, 947, 1311, 1546, 1855
PspOMI GGGCCC 1 cut(s) 1309
PspPI GGNCC 5 cut(s) 30, 905, 1309, 1310, 1392
PstI CTGCAG 1 cut(s) 289
PstNI CAGNNNCTG 2 cut(s) 710, 1484
PvuI CGATCG 1 cut(s) 808
PvuII CAGCTG 1 cut(s) 1607
RsaI GTAC 6 cut(s) 217, 496, 694, 709, 766, 1638
RsaNI GTAC 6 cut(s) 216, 495, 693, 708, 765, 1637
RseI CAYNNNNRTG 1 cut(s) 1675
SaqAI TTAA 5 cut(s) 72, 957, 1094, 1737, 1814
SatI GCNGC 4 cut(s) 429, 882, 1068, 1160
Sau3AI GATC 7 cut(s) 145, 223, 444, 754, 805, 1256, 1570
Sau96I GGNCC 5 cut(s) 30, 905, 1309, 1310, 1392
SchI GAGTC 1 cut(s) 530
ScrFI CCNGG 3 cut(s) 903, 950, 1479
SduI GDGCHC 3 cut(s) 1142, 1313, 1833
SfaNI GCATC 7 cut(s) 49, 676, 966, 1026, 1048, 1088, 1679
SfcI CTRYAG 1 cut(s) 285
SinI GGWCC 1 cut(s) 30
SmiMI CAYNNNNRTG 1 cut(s) 1675
SmlI CTYRAG 2 cut(s) 245, 1320
SmoI CTYRAG 2 cut(s) 245, 1320
SseBI AGGCCT 1 cut(s) 277
SsiI CCGC 3 cut(s) 129, 428, 1160
SspMI CTAG 4 cut(s) 563, 1376, 1518, 1695
StuI AGGCCT 1 cut(s) 277
StyD4I CCNGG 3 cut(s) 901, 948, 1477
StyI CCWWGG 1 cut(s) 1632
TaaI ACNGT 2 cut(s) 163, 1641
TaiI ACGT 1 cut(s) 1728
TaqI TCGA 4 cut(s) 20, 789, 804, 1178
TatI WGTACW 2 cut(s) 215, 692
TauI GCSGC 2 cut(s) 431, 1162
TfiI GAWTC 8 cut(s) 101, 638, 827, 1111, 1208, 1283, 1457, 1623
Tru1I TTAA 5 cut(s) 72, 957, 1094, 1737, 1814
Tru9I TTAA 5 cut(s) 72, 957, 1094, 1737, 1814
TscAI CASTG 4 cut(s) 790, 1565, 1604, 1892
TseFI GTSAC 2 cut(s) 1073, 1889
TseI GCWGC 2 cut(s) 881, 1067
Tsp45I GTSAC 2 cut(s) 1073, 1889
TspDTI ATGAA 5 cut(s) 620, 942, 1068, 1296, 1538
TspGWI ACGGA 1 cut(s) 22
TspRI CASTG 4 cut(s) 790, 1565, 1604, 1892
Van91I CCANNNNNTGG 1 cut(s) 74
VneI GTGCAC 1 cut(s) 1138
VpaK11BI GGWCC 1 cut(s) 30
VspI ATTAAT 1 cut(s) 72
XagI CCTNNNNNAGG 1 cut(s) 1087
XapI RAATTY 1 cut(s) 1587
XceI RCATGY 3 cut(s) 311, 693, 1494
XmiI GTMKAC 1 cut(s) 1121
XspI CTAG 4 cut(s) 563, 1376, 1518, 1695
Zsp2I ATGCAT 3 cut(s) 691, 702, 1041
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.