Rh7AG162900

AT-rich interactive domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7A
OG0010472
Physical Location & Seq
Forward (+)
13763479 .. 13767833
4355 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7AG162900.1

Sequence Viewer

Length: 1944 bp
ATGGCAGGATGGTCAGTTTCGACAAATGGGTCCGTGTTAGATTTGGCTGAGATTACTGATGCTAATCCAATTAATGGTGATAGTCTTGGTAGTGGTATTGAATCTGTAAAAGATGGTGTAGAATGTGGCGGTGATGATGATGATGATCATAAGGGTACTGATGTTGATACTGTAAAAGATGGTGTAGAATGTGTTGATGATGATTATAGGGGTAGGCAGAGATGTACATTTGATCAGGTTCTATCTGTTTTTCTCAAGGATATTGGTGATAGAGGTGTTGTTAGGCCTTTGCCTGCAGTTTTTGGTGATAGGCAACATGTGGATTTGTTCAAATTGTTCTGTGTTGTGAGAGATAAAGGTGGGTATGATTTGGTTTCGAACAAGAGGCTGTGGTCTTTTGTGTCCAAAGAATTGGGCTTGTTGGATGGTGGAGCAACGGCGGCTTCTGTAAAATTGATCTACTTCAAGTATTTGAACGAGTTGGAGATATGGTTTAGGGAGAGTTGTACGAGTCGGAGCTTGGGAAATGGGGAGTCTGGAAGGTATGGGACTTCTCATTTGTTGTCTTTGGAGCTAGAGAGAGAGTTTAGAGGTTTGTTGTTGTTGTTGGACGGGACAGAGCAGAAGGACAATGGTGATGGACTGGTTCATTTGGAATCTGACCAAAATGGGAAGATTGAATATAGTTTATCAGATACCAAAGATGCATGTACAATGCATTCAGGTACTGGAACTTGCAATGGTGATGACGACGAAAATGTTTGTAATGATGATCAAAATGGTACTTTGATATTACCCTCCAGTGTCGATAATAAAGAAATCGATCGTAAAAGAAAGCGACGAGAATCCTTATCAGGAATGCTGAATTGGGTAATCCAGACAGCAACACAAGTTGGTGATGCTTCAATTGGAGTGATACCAGGGCCAGCTAAGTGGAACAAGCAGGAAGGCAACGAGTTCTGGTTCCAGGCAATTAAAGCAAGGGAGGCATTGATGCTAAGAAGAGATATTACTCCAAAGACTGAAGAATTACTCCAGCAGAAGAAACTAAGGATGCATCCTTTGATGTATGAAGATACTATTGCTGCTGGTCACCATTCCTCAGAGAGGTTAAGATGCAGAGGAAGGATTCCTCAGTCTACTAAATCTCGCTCGTGCACTTGTTGCAATTCTTTGCCGCCAACTCAGAGTAATTCGATAAGTCCTCACATGGTGTTGCATGACGGTTCTAAGGAGCAAGAACCTATGGAAGTGGAAGTTGATTTAGCCTCTCCACATAGATCGGTTATCCCATCTGACGATGATGAATCCCGTGAAAAGTATGTTTCTATGGGCCCTCTCTCTCAAGCTGATGTTCCTGAATGGACTGATGTGGCCTCAGAAAGTGATAGTAAATGGCTAGGCACAAGGGTATGGCCCTTGCAATGTGAAGAAGACAATTCCCTTGTTGAAACAGATATCATTGGCCGAGGAAGACCAGATTCCTGTGGCTGTCAGCTTCCAGGTTCTGTTACATGTCATAGATTTCACATTGCTGAGGCTAGGATGAAACTGAAGAAAGAACTCGGTTCCTTGTTCTATCACTGGAGATTTGATCGTATGGGAGAGGAAATATCTCTTCAGTGGACAGCTGAAGAGGAAAAGAGATTCAAGACCTTGGTACAGTCAAAGTATCCTTTCTTTTGGAATAGTGCATCCAAGTGGTTTCCCAGAAAAACTAGGGAAAACTTGGTGAGCTATTACTTCAACGTGTTTCTTGTTAAGCGAAGAAGTTATCAGAACCGTGTAACTCCTAAAAACATAGATAGCGATGATGACGAAACAGATTTTGGGTCTTTAAGTGAGGGTTTTGGGCATGAGGCAGTCAAAGTTTCAGGCTCCAGTTTTCTGGCCTGTTCCCAGAATAAGCAGTGTGACGACTTGGATGATAAAAATGCTGTATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
ARID

Protein Analysis

647

Amino Acids

72.6

Weight (kDa)

5.09

Isoelectric Point (pI)

47.45

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ARID PF01388 77 - 160 1.9e-11 ARID/BRIGHT DNA binding domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0010472)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G11400 AT4G11400
fragaria_vesca FvH4_5g02760 FvH4_5g02770 FvH4_5g02771 FvH4_5g02772
malus_domestica MD06G1087600.v1.1 MD14G1108400.v1.1
prunus_persica Prupe.5G103500_v2.0.a1
pyrus_communis pycom06g08360 pycom14g10310
rosa_chinensis RchiOBHm_Chr7g0197161
rosa_laevigata RLG00000003956
rosa_multiflora Rmu_ssc0000465.1_g000021
rosa_roxburghii Rroxscaffold_3G00258640
rosa_rugosa Rorug07G0038200
rosa_samantha Rh7AG162900 Rh7BG164900 Rh7CG170900 Rh7DG164300
rosa_wichuraiana Rw7G014220

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 28
AccB7I CCANNNNNTGG 1 cut(s) 74
AccI GTMKAC 1 cut(s) 1139
AciI CCGC 3 cut(s) 129, 440, 1178
AcoI YGGCCR 1 cut(s) 1465
AcuI CTGAAG 4 cut(s) 1044, 1574, 1604, 1653
AdeI CACNNNGTG 1 cut(s) 1213
AfaI GTAC 7 cut(s) 157, 226, 508, 712, 727, 784, 1662
AfiI CCNNNNNNNGG 2 cut(s) 74, 1107
AflIII ACRYGT 3 cut(s) 316, 1514, 1749
AgsI TTSAA 9 cut(s) 101, 331, 466, 475, 680, 906, 1451, 1651, 1747
AjnI CCWGG 3 cut(s) 919, 966, 1501
AjuI GAANNNNNNNTTGG 4 cut(s) 850, 882, 1812, 1844
AluBI AGCT 7 cut(s) 519, 574, 929, 1349, 1498, 1631, 1737
AluI AGCT 7 cut(s) 519, 574, 929, 1349, 1498, 1631, 1737
Alw21I GWGCWC 1 cut(s) 1160
Alw44I GTGCAC 1 cut(s) 1156
AlwNI CAGNNNCTG 2 cut(s) 728, 1508
AoxI GGCC 7 cut(s) 284, 923, 1333, 1374, 1415, 1465, 1890
ApaI GGGCCC 1 cut(s) 1337
ApaLI GTGCAC 1 cut(s) 1156
ApeKI GCWGC 1 cut(s) 1085
ArsI GACNNNNNNTTYG 2 cut(s) 541, 573
AseI ATTAAT 1 cut(s) 72
AspS9I GGNCC 5 cut(s) 30, 923, 1333, 1334, 1416
AsuHPI GGTGA 9 cut(s) 89, 143, 278, 317, 647, 755, 908, 1085, 1744
AsuII TTCGAA 1 cut(s) 377
AvaII GGWCC 1 cut(s) 30
BaeGI GKGCMC 2 cut(s) 1160, 1337
BaeI ACNNNNGTAYC 2 cut(s) 147, 180
BanII GRGCYC 1 cut(s) 1337
BarI GAAGNNNNNNTAC 2 cut(s) 994, 1026
BauI CACGAG 1 cut(s) 1153
BbsI GAAGAC 2 cut(s) 1440, 1480
Bbv12I GWGCWC 1 cut(s) 1160
BbvCI CCTCAGC 1 cut(s) 1536
BbvI GCAGC 1 cut(s) 1072
BccI CCATC 6 cut(s) 3, 107, 173, 419, 632, 1300
BceAI ACGGC 1 cut(s) 453
BciT130I CCWGG 3 cut(s) 921, 968, 1503
BciVI GTATCC 1 cut(s) 1683
BclI TGATCA 3 cut(s) 145, 232, 772
BfaI CTAG 4 cut(s) 575, 1400, 1542, 1719
BfmI CTRYAG 1 cut(s) 294
BfuI GTATCC 1 cut(s) 1683
BisI GCNGC 3 cut(s) 441, 1086, 1178
BlsI GCNGC 3 cut(s) 442, 1087, 1179
Bme1390I CCNGG 3 cut(s) 921, 968, 1503
Bme18I GGWCC 1 cut(s) 30
BmgT120I GGNCC 5 cut(s) 30, 923, 1333, 1334, 1416
BmiI GGNNCC 5 cut(s) 31, 965, 1335, 1570, 1879
BmrFI CCNGG 3 cut(s) 921, 968, 1503
BmsI GCATC 8 cut(s) 49, 694, 889, 984, 1044, 1066, 1106, 1703
BpiI GAAGAC 2 cut(s) 1440, 1480
BpmI CTGGAG 4 cut(s) 784, 1019, 1606, 1864
Bpu10I CCTNAGC 1 cut(s) 1536
Bpu14I TTCGAA 1 cut(s) 377
BpuEI CTTGAG 2 cut(s) 239, 1329
Bsa29I ATCGAT 1 cut(s) 822
BsaBI GATNNNNATC 2 cut(s) 63, 144
BsaJI CCNNGG 3 cut(s) 920, 1468, 1656
BsaXI ACNNNNNCTCC 2 cut(s) 476, 506
Bsc4I CCNNNNNNNGG 2 cut(s) 74, 1107
Bse1I ACTGG 5 cut(s) 648, 733, 801, 1589, 1881
Bse3DI GCAATG 3 cut(s) 745, 1430, 1530
Bse8I GATNNNNATC 2 cut(s) 63, 144
BseBI CCWGG 3 cut(s) 921, 968, 1503
BseCI ATCGAT 1 cut(s) 822
BseDI CCNNGG 3 cut(s) 920, 1468, 1656
BseGI GGATG 7 cut(s) 14, 430, 1057, 1059, 1551, 1694, 1930
BseJI GATNNNNATC 2 cut(s) 63, 144
BseLI CCNNNNNNNGG 2 cut(s) 74, 1107
BseMI GCAATG 3 cut(s) 745, 1430, 1530
BseMII CTCAG 6 cut(s) 39, 1116, 1148, 1199, 1392, 1527
BseNI ACTGG 5 cut(s) 648, 733, 801, 1589, 1881
BseSI GKGCMC 2 cut(s) 1160, 1337
BseXI GCAGC 1 cut(s) 1072
Bsh1285I CGRYCG 1 cut(s) 826
BshFI GGCC 7 cut(s) 286, 925, 1335, 1376, 1417, 1467, 1892
BshVI ATCGAT 1 cut(s) 822
BsiEI CGRYCG 1 cut(s) 826
BsiHKAI GWGCWC 1 cut(s) 1160
BslFI GGGAC 2 cut(s) 562, 628
BslI CCNNNNNNNGG 2 cut(s) 74, 1107
BsmFI GGGAC 2 cut(s) 562, 628
BsmI GAATGC 2 cut(s) 718, 864
BsnI GGCC 7 cut(s) 286, 925, 1335, 1376, 1417, 1467, 1892
Bsp119I TTCGAA 1 cut(s) 377
Bsp120I GGGCCC 1 cut(s) 1333
Bsp1286I GDGCHC 2 cut(s) 1160, 1337
Bsp1407I TGTACA 2 cut(s) 224, 710
Bsp143I GATC 7 cut(s) 145, 232, 456, 772, 823, 1280, 1594
BspACI CCGC 3 cut(s) 129, 440, 1178
BspANI GGCC 7 cut(s) 286, 925, 1335, 1376, 1417, 1467, 1892
BspCNI CTCAG 6 cut(s) 40, 1115, 1147, 1198, 1391, 1528
BspDI ATCGAT 1 cut(s) 822
BspLI GGNNCC 5 cut(s) 31, 965, 1335, 1570, 1879
BspMAI CTGCAG 1 cut(s) 298
BspT104I TTCGAA 1 cut(s) 377
BsrDI GCAATG 3 cut(s) 745, 1430, 1530
BsrGI TGTACA 2 cut(s) 224, 710
BsrI ACTGG 5 cut(s) 648, 733, 801, 1589, 1881
BssECI CCNNGG 3 cut(s) 920, 1468, 1656
BssMI GATC 7 cut(s) 145, 232, 456, 772, 823, 1280, 1594
BssSI CACGAG 1 cut(s) 1153
BssT1I CCWWGG 1 cut(s) 1656
Bst2BI CACGAG 1 cut(s) 1153
Bst2UI CCWGG 3 cut(s) 921, 968, 1503
Bst4CI ACNGT 4 cut(s) 172, 1226, 1665, 1784
Bst6I CTCTTC 3 cut(s) 997, 1623, 1629
BstAPI GCANNNNNTGC 1 cut(s) 1164
BstAUI TGTACA 2 cut(s) 224, 710
BstBI TTCGAA 1 cut(s) 377
BstC8I GCNNGC 2 cut(s) 294, 927
BstEII GGTNACC 1 cut(s) 1091
BstENI CCTNNNNNAGG 1 cut(s) 1105
BstF5I GGATG 7 cut(s) 14, 430, 1057, 1059, 1551, 1694, 1930
BstKTI GATC 7 cut(s) 148, 235, 459, 775, 826, 1283, 1597
BstMBI GATC 7 cut(s) 145, 232, 456, 772, 823, 1280, 1594
BstMCI CGRYCG 1 cut(s) 826
BstMWI GCNNNNNNNGC 4 cut(s) 440, 977, 986, 1164
BstNI CCWGG 3 cut(s) 921, 968, 1503
BstNSI RCATGY 3 cut(s) 320, 711, 1518
BstPI GGTNACC 1 cut(s) 1091
BstSCI CCNGG 3 cut(s) 919, 966, 1501
BstSFI CTRYAG 1 cut(s) 294
BstSLI GKGCMC 2 cut(s) 1160, 1337
BstV1I GCAGC 1 cut(s) 1072
BstV2I GAAGAC 2 cut(s) 1440, 1480
BstXI CCANNNNNNTGG 3 cut(s) 412, 933, 1888
Bsu15I ATCGAT 1 cut(s) 822
BsuI GTATCC 1 cut(s) 1683
BsuRI GGCC 7 cut(s) 286, 925, 1335, 1376, 1417, 1467, 1892
BsuTUI ATCGAT 1 cut(s) 822
BtgZI GCGATG 1 cut(s) 1824
BtsCI GGATG 7 cut(s) 14, 430, 1057, 1059, 1551, 1694, 1930
BtsI GCAGTG 1 cut(s) 1916
BtsIMutI CAGTG 4 cut(s) 808, 1582, 1628, 1916
Cac8I GCNNGC 2 cut(s) 294, 927
CaiI CAGNNNCTG 2 cut(s) 728, 1508
Cfr13I GGNCC 5 cut(s) 30, 923, 1333, 1334, 1416
ClaI ATCGAT 1 cut(s) 822
Csp6I GTAC 7 cut(s) 156, 225, 507, 711, 726, 783, 1661
CviAII CATG 6 cut(s) 317, 708, 1210, 1220, 1515, 1856
CviQI GTAC 7 cut(s) 156, 225, 507, 711, 726, 783, 1661
DpnI GATC 7 cut(s) 147, 234, 458, 774, 825, 1282, 1596
DpnII GATC 7 cut(s) 145, 232, 456, 772, 823, 1280, 1594
DraIII CACNNNGTG 1 cut(s) 1213
DrdI GACNNNNNNGTC 1 cut(s) 28
DseDI GACNNNNNNGTC 1 cut(s) 28
EaeI YGGCCR 1 cut(s) 1465
Eam1104I CTCTTC 3 cut(s) 997, 1623, 1629
EarI CTCTTC 3 cut(s) 997, 1623, 1629
Eco130I CCWWGG 1 cut(s) 1656
Eco147I AGGCCT 1 cut(s) 286
Eco24I GRGCYC 1 cut(s) 1337
Eco32I GATATC 1 cut(s) 1459
Eco47I GGWCC 1 cut(s) 30
Eco57I CTGAAG 4 cut(s) 1044, 1574, 1604, 1653
Eco91I GGTNACC 1 cut(s) 1091
EcoNI CCTNNNNNAGG 1 cut(s) 1105
EcoO109I RGGNCCY 1 cut(s) 1334
EcoO65I GGTNACC 1 cut(s) 1091
EcoRII CCWGG 3 cut(s) 919, 966, 1501
EcoRV GATATC 1 cut(s) 1459
EcoT14I CCWWGG 1 cut(s) 1656
EcoT22I ATGCAT 3 cut(s) 709, 720, 1059
EcoT38I GRGCYC 1 cut(s) 1337
ErhI CCWWGG 1 cut(s) 1656
FaeI CATG 6 cut(s) 320, 711, 1213, 1223, 1518, 1859
FaqI GGGAC 2 cut(s) 562, 628
FatI CATG 6 cut(s) 316, 707, 1209, 1219, 1514, 1855
FbaI TGATCA 3 cut(s) 145, 232, 772
FblI GTMKAC 1 cut(s) 1139
Fnu4HI GCNGC 3 cut(s) 441, 1086, 1178
FokI GGATG 7 cut(s) 21, 437, 1044, 1066, 1558, 1681, 1937
FriOI GRGCYC 1 cut(s) 1337
Fsp4HI GCNGC 3 cut(s) 441, 1086, 1178
FspBI CTAG 4 cut(s) 575, 1400, 1542, 1719
GluI GCNGC 3 cut(s) 441, 1086, 1178
GsuI CTGGAG 4 cut(s) 784, 1019, 1606, 1864
HaeIII GGCC 7 cut(s) 286, 925, 1335, 1376, 1417, 1467, 1892
Hin1II CATG 6 cut(s) 320, 711, 1213, 1223, 1518, 1859
HinfI GANTC 9 cut(s) 101, 511, 533, 656, 845, 1129, 1307, 1481, 1647
HphI GGTGA 9 cut(s) 89, 143, 278, 317, 647, 755, 908, 1085, 1744
Hpy166II GTNNAC 3 cut(s) 1140, 1158, 1626
Hpy188I TCNGA 8 cut(s) 516, 661, 694, 1105, 1188, 1297, 1381, 1779
Hpy188III TCNNGA 5 cut(s) 537, 855, 877, 1358, 1651
Hpy8I GTNNAC 3 cut(s) 1140, 1158, 1626
Hpy99I CGWCG 2 cut(s) 755, 843
HpyAV CCTTC 4 cut(s) 534, 619, 941, 1119
HpyCH4III ACNGT 4 cut(s) 172, 1226, 1665, 1784
HpyCH4IV ACGT 1 cut(s) 1749
HpyF10VI GCNNNNNNNGC 4 cut(s) 440, 977, 986, 1164
HpySE526I ACGT 1 cut(s) 1749
Hsp92II CATG 6 cut(s) 320, 711, 1213, 1223, 1518, 1859
Ksp22I TGATCA 3 cut(s) 145, 232, 772
Kzo9I GATC 7 cut(s) 145, 232, 456, 772, 823, 1280, 1594
LmnI GCTCC 5 cut(s) 431, 516, 571, 1234, 1883
Lsp1109I GCAGC 1 cut(s) 1072
LweI GCATC 8 cut(s) 49, 694, 889, 984, 1044, 1066, 1106, 1703
MaeI CTAG 4 cut(s) 575, 1400, 1542, 1719
MaeII ACGT 1 cut(s) 1749
MaeIII GTNAC 4 cut(s) 1091, 1510, 1786, 1913
MalI GATC 7 cut(s) 147, 234, 458, 774, 825, 1282, 1596
MboI GATC 7 cut(s) 145, 232, 456, 772, 823, 1280, 1594
MfeI CAATTG 1 cut(s) 906
MhlI GDGCHC 2 cut(s) 1160, 1337
MlyI GAGTC 2 cut(s) 520, 542
MmeI TCCRAC 4 cut(s) 402, 462, 494, 588
Mph1103I ATGCAT 3 cut(s) 709, 720, 1059
MseI TTAA 5 cut(s) 72, 975, 1112, 1761, 1838
MslI CAYNNNNRTG 1 cut(s) 1699
MspA1I CMGCKG 1 cut(s) 1631
MspR9I CCNGG 3 cut(s) 921, 968, 1503
MunI CAATTG 1 cut(s) 906
Mva1269I GAATGC 2 cut(s) 718, 864
MvaI CCWGG 3 cut(s) 921, 968, 1503
MwoI GCNNNNNNNGC 4 cut(s) 440, 977, 986, 1164
NdeII GATC 7 cut(s) 145, 232, 456, 772, 823, 1280, 1594
NlaIII CATG 6 cut(s) 320, 711, 1213, 1223, 1518, 1859
NlaIV GGNNCC 5 cut(s) 31, 965, 1335, 1570, 1879
NmeAIII GCCGAG 1 cut(s) 1493
NmuCI GTSAC 2 cut(s) 1091, 1913
NsiI ATGCAT 3 cut(s) 709, 720, 1059
NspI RCATGY 3 cut(s) 320, 711, 1518
NspV TTCGAA 1 cut(s) 377
PceI AGGCCT 1 cut(s) 286
PciI ACATGT 2 cut(s) 316, 1514
PctI GAATGC 2 cut(s) 718, 864
PfeI GAWTC 7 cut(s) 101, 656, 845, 1129, 1307, 1481, 1647
PflMI CCANNNNNTGG 1 cut(s) 74
PkrI GCNGC 3 cut(s) 442, 1087, 1179
Ple19I CGATCG 1 cut(s) 826
PleI GAGTC 2 cut(s) 519, 541
PpsI GAGTC 2 cut(s) 519, 541
PscI ACATGT 2 cut(s) 316, 1514
PshBI ATTAAT 1 cut(s) 72
Psp6I CCWGG 3 cut(s) 919, 966, 1501
PspEI GGTNACC 1 cut(s) 1091
PspGI CCWGG 3 cut(s) 919, 966, 1501
PspN4I GGNNCC 5 cut(s) 31, 965, 1335, 1570, 1879
PspOMI GGGCCC 1 cut(s) 1333
PspPI GGNCC 5 cut(s) 30, 923, 1333, 1334, 1416
PstI CTGCAG 1 cut(s) 298
PstNI CAGNNNCTG 2 cut(s) 728, 1508
PvuI CGATCG 1 cut(s) 826
PvuII CAGCTG 1 cut(s) 1631
RsaI GTAC 7 cut(s) 157, 226, 508, 712, 727, 784, 1662
RsaNI GTAC 7 cut(s) 156, 225, 507, 711, 726, 783, 1661
RseI CAYNNNNRTG 1 cut(s) 1699
SaqAI TTAA 5 cut(s) 72, 975, 1112, 1761, 1838
SatI GCNGC 3 cut(s) 441, 1086, 1178
Sau3AI GATC 7 cut(s) 145, 232, 456, 772, 823, 1280, 1594
Sau96I GGNCC 5 cut(s) 30, 923, 1333, 1334, 1416
SchI GAGTC 2 cut(s) 520, 542
ScrFI CCNGG 3 cut(s) 921, 968, 1503
SduI GDGCHC 2 cut(s) 1160, 1337
SfaNI GCATC 8 cut(s) 49, 694, 889, 984, 1044, 1066, 1106, 1703
SfcI CTRYAG 1 cut(s) 294
SfuI TTCGAA 1 cut(s) 377
SinI GGWCC 1 cut(s) 30
SmiMI CAYNNNNRTG 1 cut(s) 1699
SmlI CTYRAG 2 cut(s) 254, 1344
SmoI CTYRAG 2 cut(s) 254, 1344
SseBI AGGCCT 1 cut(s) 286
SsiI CCGC 3 cut(s) 129, 440, 1178
SspMI CTAG 4 cut(s) 575, 1400, 1542, 1719
StuI AGGCCT 1 cut(s) 286
StyD4I CCNGG 3 cut(s) 919, 966, 1501
StyI CCWWGG 1 cut(s) 1656
TaaI ACNGT 4 cut(s) 172, 1226, 1665, 1784
TaiI ACGT 1 cut(s) 1752
TaqI TCGA 5 cut(s) 20, 377, 807, 822, 1196
TatI WGTACW 2 cut(s) 224, 710
TauI GCSGC 2 cut(s) 443, 1180
TfiI GAWTC 7 cut(s) 101, 656, 845, 1129, 1307, 1481, 1647
Tru1I TTAA 5 cut(s) 72, 975, 1112, 1761, 1838
Tru9I TTAA 5 cut(s) 72, 975, 1112, 1761, 1838
TscAI CASTG 4 cut(s) 808, 1589, 1628, 1916
TseFI GTSAC 2 cut(s) 1091, 1913
TseI GCWGC 1 cut(s) 1085
Tsp45I GTSAC 2 cut(s) 1091, 1913
TspDTI ATGAA 4 cut(s) 638, 1086, 1320, 1562
TspGWI ACGGA 1 cut(s) 22
TspRI CASTG 4 cut(s) 808, 1589, 1628, 1916
Van91I CCANNNNNTGG 1 cut(s) 74
VneI GTGCAC 1 cut(s) 1156
VpaK11BI GGWCC 1 cut(s) 30
VspI ATTAAT 1 cut(s) 72
XagI CCTNNNNNAGG 1 cut(s) 1105
XceI RCATGY 3 cut(s) 320, 711, 1518
XmiI GTMKAC 1 cut(s) 1139
XspI CTAG 4 cut(s) 575, 1400, 1542, 1719
Zsp2I ATGCAT 3 cut(s) 709, 720, 1059
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.