RchiOBHm_Chr7g0197161

AT-rich interactive domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
7
OG0010472
Physical Location & Seq
Forward (+)
15066896 .. 15071153
4258 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ17637

Sequence Viewer

Length: 1923 bp
ATGGCAGGATGGTCAGTTTCGACAAATGGGTCCGTGTTAGATTTGGCTGAGATTACTGATGCTAATCCAATTAATGGTGATAGTCTTGGTAGTGGTATTGAATCTGTAAAAGATGGTGTAGAATGTGGCGGTGATGATGATGATGATCATAAGGTTGATACTGTAAAACATGGTGTAGAATGTGTTGATGATGATTATAGGGGTAGGCAGAGATGTACATTTGATCAGGTTCTATCTGTTTTTCTCAAGGATATTGGTGATAGAGGTGTTGTTAGGCCTGTGCCTGCAGTTTTTGGTGATAGGCAACATGTGGATTTGTTCAAATTGTTCTGTGTTGTGAGAGATAAAGGTGGGTATGATTTGGTTTCGAACAAGAGGCTGTGGTCTTTTGTGTCCAAAGAATTGGGCTTGTTGGATGGTGGAGCAACGGCGGCTTCTGTAAAATTGATCTACTCCAAGTATTTGAACGAGTTGGAGATATGGTTTAGGGAGAGTTGTACGAGTAGGAGCTTGGGAAATGGGGAGTCTGGAAGGTATGGGACTTCTCATTTGTTGTCTTTGGAGCTAGAGAGAGAGTTTAGAGGTTTGTTGTTGGACGGGACAGAGCAGAAGGACAATGGTGATGGACTGGTTCATTTGGAATCTGACCAAAATGGGAAGATTGAATATAGTTTATCAGATACCAAAGATGCATGTACAATGCATTCAGGTACTGGAACTTGCAATGGTGATGACGACGAAAATGTTTGTAATGATGATCAAAATGGTACTTTGATATTACCCTCCAGTGTCGATAATAAAGAAATCGATCGTAAAAGAAAGCGACGAGAATCCTTATCAGGAATGCTGAATTGGGTAATCCAGACAGCAACACAAGTTGGTGATGCTTCAATTGGAGTGATACCAGGGCCAGCTAAGTGGAACAAGCATGAAGGCAACGAGTTCTGGTTCCAGGCAATTAAAGCAAGGGATGCATTGATGCTAAGAAGAGATATTACTCCAAAGACTGAAGAATTACTCCAGCAGAAGAAACTAAGGATGCATCCTTTGATGTATGAAGATACTATTGCTGCTGGTCACCATTCCTCAGAGAGGTTAAGATGCAGAGGAAGGATTCCTCAGTCTACTAAATCTCGCTCGTGCACTTGTTGCAATTCTTTGCCGCCAACTCAGAGTAATTTGATAAGTCCTCACATGGTGTTGCATGACGATTCTAAGGAGCAAGAACCTATGGAAGTTGATTTAGCCTCTCCACATAGATCGGTTATCCCATCTGACGATGATGAATCCCGTGAAAAGTATGTTTCTGTGGGCCCTCTCTCTCAAGCTGATGTTCCTGAATGGACTGATGTGGCCTCAGAAAGTGATAGTAAATGGCTAGGCACAAGGGTATGGCCCTTGCAATGTGAAGAAGACAATTCCCTTGTTGAAACAGATATCATTGGCCGAGGAAGACCAGATTCCTGTGGCTGTCAGCTTCCAGGTTCTGTTACATGTCATAGATTTCACATTGCTGAGGCTAGGATGAAACTGAAGAAAGAACTTGGTTCCTTGTTCTATCACTGGAGGTTTGATCGTATGGGAGAGGAAATTTCTCTTCAGTGGACAGCTGAAGAGGAAAAGAGATTCAAGACCTTGGTACAGTCAAAGTATCCTTTATTTTGGAATAGTGCGTCCAAGTGGTTTCCCAGAAAAACTAGGGAAAACTTGGTGAGCTATTACTTCAACGTGTTTCTTGTTAAGCGAAGAAGTTATCAGAACCGTGTAACTCCTAAAAATATAGATAGCGATGATGACGAAACAGATTTTGTGTCTTTAAGTGAGGGTTTTGGGCACGAGGCAGTCAAAGTTTCAGGCTCCAATTTTCTGGCCTGTTCCCAGAATAAGCAGTGTGACGACTTGGATGATAAAAATGCTGTATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
ARID

Protein Analysis

640

Amino Acids

71.9

Weight (kDa)

5.21

Isoelectric Point (pI)

47.03

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ARID PF01388 74 - 157 1.2e-11 ARID/BRIGHT DNA binding domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0010472)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G11400 AT4G11400
fragaria_vesca FvH4_5g02760 FvH4_5g02770 FvH4_5g02771 FvH4_5g02772
malus_domestica MD06G1087600.v1.1 MD14G1108400.v1.1
prunus_persica Prupe.5G103500_v2.0.a1
pyrus_communis pycom06g08360 pycom14g10310
rosa_chinensis RchiOBHm_Chr7g0197161
rosa_laevigata RLG00000003956
rosa_multiflora Rmu_ssc0000465.1_g000021
rosa_roxburghii Rroxscaffold_3G00258640
rosa_rugosa Rorug07G0038200
rosa_samantha Rh7AG162900 Rh7BG164900 Rh7CG170900 Rh7DG164300
rosa_wichuraiana Rw7G014220

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 28
AccB7I CCANNNNNTGG 1 cut(s) 74
AccI GTMKAC 1 cut(s) 1124
AciI CCGC 3 cut(s) 129, 431, 1163
AcoI YGGCCR 1 cut(s) 1444
AcsI RAATTY 1 cut(s) 1590
AcuI CTGAAG 4 cut(s) 1029, 1553, 1583, 1632
AdeI CACNNNGTG 1 cut(s) 1198
AfaI GTAC 6 cut(s) 217, 499, 697, 712, 769, 1641
AfiI CCNNNNNNNGG 2 cut(s) 74, 1092
AflIII ACRYGT 3 cut(s) 307, 1493, 1728
AgsI TTSAA 8 cut(s) 101, 322, 466, 665, 891, 1430, 1630, 1726
AjnI CCWGG 3 cut(s) 904, 951, 1480
AjuI GAANNNNNNNTTGG 2 cut(s) 835, 867
AluBI AGCT 7 cut(s) 510, 565, 914, 1328, 1477, 1610, 1716
AluI AGCT 7 cut(s) 510, 565, 914, 1328, 1477, 1610, 1716
Alw21I GWGCWC 1 cut(s) 1145
Alw44I GTGCAC 1 cut(s) 1141
AlwNI CAGNNNCTG 2 cut(s) 713, 1487
AoxI GGCC 7 cut(s) 275, 908, 1312, 1353, 1394, 1444, 1869
ApaI GGGCCC 1 cut(s) 1316
ApaLI GTGCAC 1 cut(s) 1141
ApeKI GCWGC 1 cut(s) 1070
ApoI RAATTY 1 cut(s) 1590
ArsI GACNNNNNNTTYG 2 cut(s) 532, 564
AseI ATTAAT 1 cut(s) 72
AspS9I GGNCC 5 cut(s) 30, 908, 1312, 1313, 1395
AsuHPI GGTGA 9 cut(s) 89, 143, 269, 308, 632, 740, 893, 1070, 1723
AsuII TTCGAA 1 cut(s) 368
AvaII GGWCC 1 cut(s) 30
BaeGI GKGCMC 3 cut(s) 1145, 1316, 1836
BanII GRGCYC 1 cut(s) 1316
BarI GAAGNNNNNNTAC 2 cut(s) 979, 1011
BauI CACGAG 2 cut(s) 1138, 1835
BbsI GAAGAC 2 cut(s) 1419, 1459
Bbv12I GWGCWC 1 cut(s) 1145
BbvCI CCTCAGC 1 cut(s) 1515
BbvI GCAGC 1 cut(s) 1057
BccI CCATC 5 cut(s) 3, 107, 410, 617, 1279
BceAI ACGGC 1 cut(s) 444
BciT130I CCWGG 3 cut(s) 906, 953, 1482
BciVI GTATCC 1 cut(s) 1662
BclI TGATCA 3 cut(s) 145, 223, 757
BfaI CTAG 4 cut(s) 566, 1379, 1521, 1698
BfmI CTRYAG 1 cut(s) 285
BfuI GTATCC 1 cut(s) 1662
BisI GCNGC 3 cut(s) 432, 1071, 1163
BlsI GCNGC 3 cut(s) 433, 1072, 1164
Bme1390I CCNGG 3 cut(s) 906, 953, 1482
Bme18I GGWCC 1 cut(s) 30
BmgT120I GGNCC 5 cut(s) 30, 908, 1312, 1313, 1395
BmiI GGNNCC 5 cut(s) 31, 950, 1314, 1549, 1858
BmrFI CCNGG 3 cut(s) 906, 953, 1482
BmsI GCATC 8 cut(s) 49, 679, 874, 961, 969, 1029, 1051, 1091
BpiI GAAGAC 2 cut(s) 1419, 1459
BpmI CTGGAG 3 cut(s) 769, 1004, 1585
Bpu10I CCTNAGC 1 cut(s) 1515
Bpu14I TTCGAA 1 cut(s) 368
BpuEI CTTGAG 2 cut(s) 230, 1308
Bsa29I ATCGAT 1 cut(s) 807
BsaBI GATNNNNATC 2 cut(s) 63, 144
BsaJI CCNNGG 3 cut(s) 905, 1447, 1635
BsaXI ACNNNNNCTCC 2 cut(s) 467, 497
Bsc4I CCNNNNNNNGG 2 cut(s) 74, 1092
Bse1I ACTGG 4 cut(s) 633, 718, 786, 1568
Bse3DI GCAATG 3 cut(s) 730, 1409, 1509
Bse8I GATNNNNATC 2 cut(s) 63, 144
BseBI CCWGG 3 cut(s) 906, 953, 1482
BseCI ATCGAT 1 cut(s) 807
BseDI CCNNGG 3 cut(s) 905, 1447, 1635
BseGI GGATG 7 cut(s) 14, 421, 976, 1042, 1044, 1530, 1909
BseJI GATNNNNATC 2 cut(s) 63, 144
BseLI CCNNNNNNNGG 2 cut(s) 74, 1092
BseMI GCAATG 3 cut(s) 730, 1409, 1509
BseMII CTCAG 6 cut(s) 39, 1101, 1133, 1184, 1371, 1506
BseNI ACTGG 4 cut(s) 633, 718, 786, 1568
BseSI GKGCMC 3 cut(s) 1145, 1316, 1836
BseXI GCAGC 1 cut(s) 1057
Bsh1285I CGRYCG 1 cut(s) 811
BshFI GGCC 7 cut(s) 277, 910, 1314, 1355, 1396, 1446, 1871
BshVI ATCGAT 1 cut(s) 807
BsiEI CGRYCG 1 cut(s) 811
BsiHKAI GWGCWC 1 cut(s) 1145
BslFI GGGAC 2 cut(s) 553, 613
BslI CCNNNNNNNGG 2 cut(s) 74, 1092
BsmFI GGGAC 2 cut(s) 553, 613
BsmI GAATGC 2 cut(s) 703, 849
BsnI GGCC 7 cut(s) 277, 910, 1314, 1355, 1396, 1446, 1871
Bsp119I TTCGAA 1 cut(s) 368
Bsp120I GGGCCC 1 cut(s) 1312
Bsp1286I GDGCHC 3 cut(s) 1145, 1316, 1836
Bsp1407I TGTACA 2 cut(s) 215, 695
Bsp143I GATC 7 cut(s) 145, 223, 447, 757, 808, 1259, 1573
BspACI CCGC 3 cut(s) 129, 431, 1163
BspANI GGCC 7 cut(s) 277, 910, 1314, 1355, 1396, 1446, 1871
BspCNI CTCAG 6 cut(s) 40, 1100, 1132, 1183, 1370, 1507
BspDI ATCGAT 1 cut(s) 807
BspLI GGNNCC 5 cut(s) 31, 950, 1314, 1549, 1858
BspMAI CTGCAG 1 cut(s) 289
BspT104I TTCGAA 1 cut(s) 368
BsrDI GCAATG 3 cut(s) 730, 1409, 1509
BsrGI TGTACA 2 cut(s) 215, 695
BsrI ACTGG 4 cut(s) 633, 718, 786, 1568
BssECI CCNNGG 3 cut(s) 905, 1447, 1635
BssMI GATC 7 cut(s) 145, 223, 447, 757, 808, 1259, 1573
BssSI CACGAG 2 cut(s) 1138, 1835
BssT1I CCWWGG 1 cut(s) 1635
Bst2BI CACGAG 2 cut(s) 1138, 1835
Bst2UI CCWGG 3 cut(s) 906, 953, 1482
Bst4CI ACNGT 3 cut(s) 163, 1644, 1763
Bst6I CTCTTC 3 cut(s) 982, 1602, 1608
BstAPI GCANNNNNTGC 2 cut(s) 971, 1149
BstAUI TGTACA 2 cut(s) 215, 695
BstBI TTCGAA 1 cut(s) 368
BstC8I GCNNGC 2 cut(s) 285, 912
BstEII GGTNACC 1 cut(s) 1076
BstENI CCTNNNNNAGG 1 cut(s) 1090
BstF5I GGATG 7 cut(s) 14, 421, 976, 1042, 1044, 1530, 1909
BstKTI GATC 7 cut(s) 148, 226, 450, 760, 811, 1262, 1576
BstMBI GATC 7 cut(s) 145, 223, 447, 757, 808, 1259, 1573
BstMCI CGRYCG 1 cut(s) 811
BstMWI GCNNNNNNNGC 4 cut(s) 431, 962, 971, 1149
BstNI CCWGG 3 cut(s) 906, 953, 1482
BstNSI RCATGY 3 cut(s) 311, 696, 1497
BstPI GGTNACC 1 cut(s) 1076
BstSCI CCNGG 3 cut(s) 904, 951, 1480
BstSFI CTRYAG 1 cut(s) 285
BstSLI GKGCMC 3 cut(s) 1145, 1316, 1836
BstV1I GCAGC 1 cut(s) 1057
BstV2I GAAGAC 2 cut(s) 1419, 1459
BstXI CCANNNNNNTGG 3 cut(s) 403, 918, 1867
Bsu15I ATCGAT 1 cut(s) 807
BsuI GTATCC 1 cut(s) 1662
BsuRI GGCC 7 cut(s) 277, 910, 1314, 1355, 1396, 1446, 1871
BsuTUI ATCGAT 1 cut(s) 807
BtgZI GCGATG 1 cut(s) 1803
BtsCI GGATG 7 cut(s) 14, 421, 976, 1042, 1044, 1530, 1909
BtsI GCAGTG 1 cut(s) 1895
BtsIMutI CAGTG 4 cut(s) 793, 1561, 1607, 1895
Cac8I GCNNGC 2 cut(s) 285, 912
CaiI CAGNNNCTG 2 cut(s) 713, 1487
Cfr13I GGNCC 5 cut(s) 30, 908, 1312, 1313, 1395
ClaI ATCGAT 1 cut(s) 807
CseI GACGC 1 cut(s) 1662
Csp6I GTAC 6 cut(s) 216, 498, 696, 711, 768, 1640
CviAII CATG 7 cut(s) 170, 308, 693, 929, 1195, 1205, 1494
CviQI GTAC 6 cut(s) 216, 498, 696, 711, 768, 1640
DpnI GATC 7 cut(s) 147, 225, 449, 759, 810, 1261, 1575
DpnII GATC 7 cut(s) 145, 223, 447, 757, 808, 1259, 1573
DraIII CACNNNGTG 1 cut(s) 1198
DrdI GACNNNNNNGTC 1 cut(s) 28
DseDI GACNNNNNNGTC 1 cut(s) 28
EaeI YGGCCR 1 cut(s) 1444
Eam1104I CTCTTC 3 cut(s) 982, 1602, 1608
EarI CTCTTC 3 cut(s) 982, 1602, 1608
Eco130I CCWWGG 1 cut(s) 1635
Eco147I AGGCCT 1 cut(s) 277
Eco24I GRGCYC 1 cut(s) 1316
Eco32I GATATC 1 cut(s) 1438
Eco47I GGWCC 1 cut(s) 30
Eco57I CTGAAG 4 cut(s) 1029, 1553, 1583, 1632
Eco91I GGTNACC 1 cut(s) 1076
EcoNI CCTNNNNNAGG 1 cut(s) 1090
EcoO109I RGGNCCY 1 cut(s) 1313
EcoO65I GGTNACC 1 cut(s) 1076
EcoRII CCWGG 3 cut(s) 904, 951, 1480
EcoRV GATATC 1 cut(s) 1438
EcoT14I CCWWGG 1 cut(s) 1635
EcoT22I ATGCAT 4 cut(s) 694, 705, 976, 1044
EcoT38I GRGCYC 1 cut(s) 1316
ErhI CCWWGG 1 cut(s) 1635
FaeI CATG 7 cut(s) 173, 311, 696, 932, 1198, 1208, 1497
FaqI GGGAC 2 cut(s) 553, 613
FatI CATG 7 cut(s) 169, 307, 692, 928, 1194, 1204, 1493
FbaI TGATCA 3 cut(s) 145, 223, 757
FblI GTMKAC 1 cut(s) 1124
Fnu4HI GCNGC 3 cut(s) 432, 1071, 1163
FokI GGATG 7 cut(s) 21, 428, 983, 1029, 1051, 1537, 1916
FriOI GRGCYC 1 cut(s) 1316
Fsp4HI GCNGC 3 cut(s) 432, 1071, 1163
FspBI CTAG 4 cut(s) 566, 1379, 1521, 1698
GluI GCNGC 3 cut(s) 432, 1071, 1163
GsuI CTGGAG 3 cut(s) 769, 1004, 1585
HaeIII GGCC 7 cut(s) 277, 910, 1314, 1355, 1396, 1446, 1871
HgaI GACGC 1 cut(s) 1662
Hin1II CATG 7 cut(s) 173, 311, 696, 932, 1198, 1208, 1497
HinfI GANTC 9 cut(s) 101, 524, 641, 830, 1114, 1211, 1286, 1460, 1626
HphI GGTGA 9 cut(s) 89, 143, 269, 308, 632, 740, 893, 1070, 1723
Hpy166II GTNNAC 3 cut(s) 1125, 1143, 1605
Hpy188I TCNGA 7 cut(s) 646, 679, 1090, 1173, 1276, 1360, 1758
Hpy188III TCNNGA 5 cut(s) 528, 840, 862, 1337, 1630
Hpy8I GTNNAC 3 cut(s) 1125, 1143, 1605
Hpy99I CGWCG 2 cut(s) 740, 828
HpyAV CCTTC 4 cut(s) 525, 604, 926, 1104
HpyCH4III ACNGT 3 cut(s) 163, 1644, 1763
HpyCH4IV ACGT 1 cut(s) 1728
HpyF10VI GCNNNNNNNGC 4 cut(s) 431, 962, 971, 1149
HpySE526I ACGT 1 cut(s) 1728
Hsp92II CATG 7 cut(s) 173, 311, 696, 932, 1198, 1208, 1497
Ksp22I TGATCA 3 cut(s) 145, 223, 757
Kzo9I GATC 7 cut(s) 145, 223, 447, 757, 808, 1259, 1573
LmnI GCTCC 5 cut(s) 422, 507, 562, 1219, 1862
Lsp1109I GCAGC 1 cut(s) 1057
LweI GCATC 8 cut(s) 49, 679, 874, 961, 969, 1029, 1051, 1091
MaeI CTAG 4 cut(s) 566, 1379, 1521, 1698
MaeII ACGT 1 cut(s) 1728
MaeIII GTNAC 4 cut(s) 1076, 1489, 1765, 1892
MalI GATC 7 cut(s) 147, 225, 449, 759, 810, 1261, 1575
MboI GATC 7 cut(s) 145, 223, 447, 757, 808, 1259, 1573
MfeI CAATTG 1 cut(s) 891
MhlI GDGCHC 3 cut(s) 1145, 1316, 1836
MlyI GAGTC 1 cut(s) 533
MmeI TCCRAC 3 cut(s) 393, 453, 573
Mph1103I ATGCAT 4 cut(s) 694, 705, 976, 1044
MseI TTAA 5 cut(s) 72, 960, 1097, 1740, 1817
MspA1I CMGCKG 1 cut(s) 1610
MspR9I CCNGG 3 cut(s) 906, 953, 1482
MunI CAATTG 1 cut(s) 891
Mva1269I GAATGC 2 cut(s) 703, 849
MvaI CCWGG 3 cut(s) 906, 953, 1482
MwoI GCNNNNNNNGC 4 cut(s) 431, 962, 971, 1149
NdeII GATC 7 cut(s) 145, 223, 447, 757, 808, 1259, 1573
NlaIII CATG 7 cut(s) 173, 311, 696, 932, 1198, 1208, 1497
NlaIV GGNNCC 5 cut(s) 31, 950, 1314, 1549, 1858
NmeAIII GCCGAG 1 cut(s) 1472
NmuCI GTSAC 2 cut(s) 1076, 1892
NsiI ATGCAT 4 cut(s) 694, 705, 976, 1044
NspI RCATGY 3 cut(s) 311, 696, 1497
NspV TTCGAA 1 cut(s) 368
PceI AGGCCT 1 cut(s) 277
PciI ACATGT 2 cut(s) 307, 1493
PctI GAATGC 2 cut(s) 703, 849
PfeI GAWTC 8 cut(s) 101, 641, 830, 1114, 1211, 1286, 1460, 1626
PflMI CCANNNNNTGG 1 cut(s) 74
PkrI GCNGC 3 cut(s) 433, 1072, 1164
Ple19I CGATCG 1 cut(s) 811
PleI GAGTC 1 cut(s) 532
PpsI GAGTC 1 cut(s) 532
PscI ACATGT 2 cut(s) 307, 1493
PshBI ATTAAT 1 cut(s) 72
Psp6I CCWGG 3 cut(s) 904, 951, 1480
PspEI GGTNACC 1 cut(s) 1076
PspGI CCWGG 3 cut(s) 904, 951, 1480
PspN4I GGNNCC 5 cut(s) 31, 950, 1314, 1549, 1858
PspOMI GGGCCC 1 cut(s) 1312
PspPI GGNCC 5 cut(s) 30, 908, 1312, 1313, 1395
PstI CTGCAG 1 cut(s) 289
PstNI CAGNNNCTG 2 cut(s) 713, 1487
PvuI CGATCG 1 cut(s) 811
PvuII CAGCTG 1 cut(s) 1610
RsaI GTAC 6 cut(s) 217, 499, 697, 712, 769, 1641
RsaNI GTAC 6 cut(s) 216, 498, 696, 711, 768, 1640
SaqAI TTAA 5 cut(s) 72, 960, 1097, 1740, 1817
SatI GCNGC 3 cut(s) 432, 1071, 1163
Sau3AI GATC 7 cut(s) 145, 223, 447, 757, 808, 1259, 1573
Sau96I GGNCC 5 cut(s) 30, 908, 1312, 1313, 1395
SchI GAGTC 1 cut(s) 533
ScrFI CCNGG 3 cut(s) 906, 953, 1482
SduI GDGCHC 3 cut(s) 1145, 1316, 1836
SfaNI GCATC 8 cut(s) 49, 679, 874, 961, 969, 1029, 1051, 1091
SfcI CTRYAG 1 cut(s) 285
SfuI TTCGAA 1 cut(s) 368
SinI GGWCC 1 cut(s) 30
SmlI CTYRAG 2 cut(s) 245, 1323
SmoI CTYRAG 2 cut(s) 245, 1323
SseBI AGGCCT 1 cut(s) 277
SsiI CCGC 3 cut(s) 129, 431, 1163
SspMI CTAG 4 cut(s) 566, 1379, 1521, 1698
StuI AGGCCT 1 cut(s) 277
StyD4I CCNGG 3 cut(s) 904, 951, 1480
StyI CCWWGG 1 cut(s) 1635
TaaI ACNGT 3 cut(s) 163, 1644, 1763
TaiI ACGT 1 cut(s) 1731
TaqI TCGA 4 cut(s) 20, 368, 792, 807
TatI WGTACW 2 cut(s) 215, 695
TauI GCSGC 2 cut(s) 434, 1165
TfiI GAWTC 8 cut(s) 101, 641, 830, 1114, 1211, 1286, 1460, 1626
Tru1I TTAA 5 cut(s) 72, 960, 1097, 1740, 1817
Tru9I TTAA 5 cut(s) 72, 960, 1097, 1740, 1817
TscAI CASTG 4 cut(s) 793, 1568, 1607, 1895
TseFI GTSAC 2 cut(s) 1076, 1892
TseI GCWGC 1 cut(s) 1070
Tsp45I GTSAC 2 cut(s) 1076, 1892
TspDTI ATGAA 5 cut(s) 623, 945, 1071, 1299, 1541
TspGWI ACGGA 1 cut(s) 22
TspRI CASTG 4 cut(s) 793, 1568, 1607, 1895
Van91I CCANNNNNTGG 1 cut(s) 74
VneI GTGCAC 1 cut(s) 1141
VpaK11BI GGWCC 1 cut(s) 30
VspI ATTAAT 1 cut(s) 72
XagI CCTNNNNNAGG 1 cut(s) 1090
XapI RAATTY 1 cut(s) 1590
XceI RCATGY 3 cut(s) 311, 696, 1497
XmiI GTMKAC 1 cut(s) 1124
XspI CTAG 4 cut(s) 566, 1379, 1521, 1698
Zsp2I ATGCAT 4 cut(s) 694, 705, 976, 1044
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.