AT-rich interactive domain-containing protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G11400 AT4G11400 |
| fragaria_vesca | FvH4_5g02760 FvH4_5g02770 FvH4_5g02771 FvH4_5g02772 |
| malus_domestica | MD06G1087600.v1.1 MD14G1108400.v1.1 |
| prunus_persica | Prupe.5G103500_v2.0.a1 |
| pyrus_communis | pycom06g08360 pycom14g10310 |
| rosa_chinensis | RchiOBHm_Chr7g0197161 |
| rosa_laevigata | RLG00000003956 |
| rosa_multiflora | Rmu_ssc0000465.1_g000021 |
| rosa_roxburghii | Rroxscaffold_3G00258640 |
| rosa_rugosa | Rorug07G0038200 |
| rosa_samantha | Rh7AG162900 Rh7BG164900 Rh7CG170900 Rh7DG164300 |
| rosa_wichuraiana | Rw7G014220 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccBSI | CCGCTC | 1 cut(s) | 532 |
| AciI | CCGC | 2 cut(s) | 24, 532 |
| AclWI | GGATC | 2 cut(s) | 731, 1666 |
| AcoI | YGGCCR | 3 cut(s) | 524, 1068, 1252 |
| AcsI | RAATTY | 2 cut(s) | 1465, 1495 |
| AcuI | CTGAAG | 2 cut(s) | 885, 1440 |
| AfaI | GTAC | 1 cut(s) | 911 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 746, 1105 |
| AflII | CTTAAG | 1 cut(s) | 191 |
| AflIII | ACRYGT | 1 cut(s) | 62 |
| AgsI | TTSAA | 9 cut(s) | 271, 409, 744, 858, 1210, 1342, 1438, 1456, 1573 |
| AjnI | CCWGG | 2 cut(s) | 714, 757 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 688, 720, 724, 756 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 1718, 1750 |
| AluBI | AGCT | 8 cut(s) | 182, 415, 889, 1046, 1136, 1351, 1418, 1563 |
| AluI | AGCT | 8 cut(s) | 182, 415, 889, 1046, 1136, 1351, 1418, 1563 |
| Alw21I | GWGCWC | 1 cut(s) | 944 |
| Alw26I | GTCTC | 4 cut(s) | 40, 650, 878, 1117 |
| AlwI | GGATC | 2 cut(s) | 731, 1666 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1295 |
| AoxI | GGCC | 7 cut(s) | 224, 524, 761, 1068, 1202, 1225, 1252 |
| ApoI | RAATTY | 2 cut(s) | 1465, 1495 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 1095, 1127 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 969 |
| AspLEI | GCGC | 2 cut(s) | 1124, 1593 |
| AspS9I | GGNCC | 4 cut(s) | 761, 805, 1203, 1226 |
| AsuHPI | GGTGA | 7 cut(s) | 149, 215, 257, 298, 505, 596, 1403 |
| AsuII | TTCGAA | 1 cut(s) | 317 |
| AvaII | GGWCC | 1 cut(s) | 805 |
| BalI | TGGCCA | 3 cut(s) | 526, 1070, 1254 |
| BbsI | GAAGAC | 4 cut(s) | 474, 1227, 1267, 1557 |
| Bbv12I | GWGCWC | 1 cut(s) | 944 |
| BccI | CCATC | 4 cut(s) | 3, 110, 200, 542 |
| BceAI | ACGGC | 1 cut(s) | 1240 |
| BciT130I | CCWGG | 2 cut(s) | 716, 759 |
| BclI | TGATCA | 2 cut(s) | 139, 361 |
| BcoDI | GTCTC | 4 cut(s) | 40, 650, 878, 1117 |
| BfaI | CTAG | 6 cut(s) | 447, 563, 642, 1187, 1329, 1750 |
| BfmI | CTRYAG | 2 cut(s) | 1050, 1116 |
| BfoI | RGCGCY | 1 cut(s) | 1125 |
| BfrI | CTTAAG | 1 cut(s) | 191 |
| BglII | AGATCT | 1 cut(s) | 1243 |
| Bme1390I | CCNGG | 2 cut(s) | 716, 759 |
| Bme18I | GGWCC | 1 cut(s) | 805 |
| BmgT120I | GGNCC | 4 cut(s) | 761, 805, 1203, 1226 |
| BmiI | GGNNCC | 3 cut(s) | 806, 1228, 1357 |
| BmrFI | CCNGG | 2 cut(s) | 716, 759 |
| BmrI | ACTGGG | 1 cut(s) | 1164 |
| BmsI | GCATC | 6 cut(s) | 481, 885, 907, 947, 1066, 1529 |
| BmuI | ACTGGG | 1 cut(s) | 1164 |
| BoxI | GACNNNNGTC | 1 cut(s) | 63 |
| BpiI | GAAGAC | 4 cut(s) | 474, 1227, 1267, 1557 |
| BpmI | CTGGAG | 3 cut(s) | 437, 591, 860 |
| Bpu10I | CCTNAGC | 1 cut(s) | 943 |
| Bpu14I | TTCGAA | 1 cut(s) | 317 |
| BpuEI | CTTGAG | 1 cut(s) | 1116 |
| BsaBI | GATNNNNATC | 2 cut(s) | 13, 471 |
| BsaJI | CCNNGG | 2 cut(s) | 758, 1255 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 410, 440 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 746, 1105 |
| Bse1I | ACTGG | 2 cut(s) | 937, 1159 |
| Bse3DI | GCAATG | 3 cut(s) | 378, 586, 830 |
| Bse8I | GATNNNNATC | 2 cut(s) | 13, 471 |
| BseBI | CCWGG | 2 cut(s) | 716, 759 |
| BseDI | CCNNGG | 2 cut(s) | 758, 1255 |
| BseGI | GGATG | 8 cut(s) | 14, 14, 121, 472, 898, 1114, 1338, 1520 |
| BseJI | GATNNNNATC | 2 cut(s) | 13, 471 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 746, 1105 |
| BseMI | GCAATG | 3 cut(s) | 378, 586, 830 |
| BseMII | CTCAG | 4 cut(s) | 51, 957, 1077, 1314 |
| BseNI | ACTGG | 2 cut(s) | 937, 1159 |
| BseRI | GAGGAG | 1 cut(s) | 1103 |
| BseYI | CCCAGC | 3 cut(s) | 26, 232, 801 |
| BshFI | GGCC | 7 cut(s) | 226, 526, 763, 1070, 1204, 1227, 1254 |
| BsiHKAI | GWGCWC | 1 cut(s) | 944 |
| BslFI | GGGAC | 2 cut(s) | 215, 1127 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 746, 1105 |
| BsmAI | GTCTC | 4 cut(s) | 40, 650, 878, 1117 |
| BsmFI | GGGAC | 2 cut(s) | 215, 1127 |
| BsmI | GAATGC | 2 cut(s) | 581, 702 |
| BsnI | GGCC | 7 cut(s) | 226, 526, 763, 1070, 1204, 1227, 1254 |
| Bsp119I | TTCGAA | 1 cut(s) | 317 |
| Bsp1286I | GDGCHC | 1 cut(s) | 944 |
| Bsp143I | GATC | 8 cut(s) | 139, 361, 613, 664, 736, 1243, 1381, 1658 |
| BspACI | CCGC | 2 cut(s) | 24, 532 |
| BspANI | GGCC | 7 cut(s) | 226, 526, 763, 1070, 1204, 1227, 1254 |
| BspCNI | CTCAG | 4 cut(s) | 50, 956, 1078, 1315 |
| BspLI | GGNNCC | 3 cut(s) | 806, 1228, 1357 |
| BspMAI | CTGCAG | 1 cut(s) | 1054 |
| BspPI | GGATC | 2 cut(s) | 731, 1666 |
| BspT104I | TTCGAA | 1 cut(s) | 317 |
| BspTI | CTTAAG | 1 cut(s) | 191 |
| BsrBI | CCGCTC | 1 cut(s) | 532 |
| BsrDI | GCAATG | 3 cut(s) | 378, 586, 830 |
| BsrI | ACTGG | 2 cut(s) | 937, 1159 |
| BssECI | CCNNGG | 2 cut(s) | 758, 1255 |
| BssMI | GATC | 8 cut(s) | 139, 361, 613, 664, 736, 1243, 1381, 1658 |
| BssT1I | CCWWGG | 1 cut(s) | 1255 |
| Bst2UI | CCWGG | 2 cut(s) | 716, 759 |
| Bst4CI | ACNGT | 1 cut(s) | 1716 |
| Bst6I | CTCTTC | 2 cut(s) | 1337, 1410 |
| BstAFI | CTTAAG | 1 cut(s) | 191 |
| BstBI | TTCGAA | 1 cut(s) | 317 |
| BstDEI | CTNAG | 9 cut(s) | 37, 768, 815, 943, 1086, 1232, 1323, 1535, 1664 |
| BstF5I | GGATG | 8 cut(s) | 14, 14, 121, 472, 898, 1114, 1338, 1520 |
| BstH2I | RGCGCY | 1 cut(s) | 1125 |
| BstHHI | GCGC | 2 cut(s) | 1124, 1593 |
| BstKTI | GATC | 8 cut(s) | 142, 364, 616, 667, 739, 1246, 1384, 1661 |
| BstMAI | GTCTC | 4 cut(s) | 40, 650, 878, 1117 |
| BstMBI | GATC | 8 cut(s) | 139, 361, 613, 664, 736, 1243, 1381, 1658 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 818, 827, 886, 895, 1005, 1076 |
| BstNI | CCWGG | 2 cut(s) | 716, 759 |
| BstNSI | RCATGY | 2 cut(s) | 66, 1305 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 63 |
| BstSCI | CCNGG | 2 cut(s) | 714, 757 |
| BstSFI | CTRYAG | 2 cut(s) | 1050, 1116 |
| BstV2I | GAAGAC | 4 cut(s) | 474, 1227, 1267, 1557 |
| BstX2I | RGATCY | 2 cut(s) | 1243, 1658 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 352, 771 |
| BstYI | RGATCY | 2 cut(s) | 1243, 1658 |
| BsuRI | GGCC | 7 cut(s) | 226, 526, 763, 1070, 1204, 1227, 1254 |
| BtgZI | GCGATG | 1 cut(s) | 804 |
| BtsCI | GGATG | 8 cut(s) | 14, 14, 121, 472, 898, 1114, 1338, 1520 |
| BtsI | GCAGTG | 2 cut(s) | 243, 967 |
| BtsIMutI | CAGTG | 5 cut(s) | 243, 944, 967, 1071, 1737 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1295 |
| CfoI | GCGC | 2 cut(s) | 1124, 1593 |
| Cfr13I | GGNCC | 4 cut(s) | 761, 805, 1203, 1226 |
| CseI | GACGC | 1 cut(s) | 34 |
| Csp6I | GTAC | 1 cut(s) | 910 |
| CviAII | CATG | 5 cut(s) | 63, 98, 996, 1127, 1302 |
| CviQI | GTAC | 1 cut(s) | 910 |
| DdeI | CTNAG | 9 cut(s) | 37, 768, 815, 943, 1086, 1232, 1323, 1535, 1664 |
| DpnI | GATC | 8 cut(s) | 141, 363, 615, 666, 738, 1245, 1383, 1660 |
| DpnII | GATC | 8 cut(s) | 139, 361, 613, 664, 736, 1243, 1381, 1658 |
| DraI | TTTAAA | 1 cut(s) | 400 |
| EaeI | YGGCCR | 3 cut(s) | 524, 1068, 1252 |
| Eam1104I | CTCTTC | 2 cut(s) | 1337, 1410 |
| EarI | CTCTTC | 2 cut(s) | 1337, 1410 |
| Eco130I | CCWWGG | 1 cut(s) | 1255 |
| Eco147I | AGGCCT | 1 cut(s) | 226 |
| Eco32I | GATATC | 1 cut(s) | 633 |
| Eco47I | GGWCC | 1 cut(s) | 805 |
| Eco57I | CTGAAG | 2 cut(s) | 885, 1440 |
| EcoRII | CCWGG | 2 cut(s) | 714, 757 |
| EcoRV | GATATC | 1 cut(s) | 633 |
| EcoT14I | CCWWGG | 1 cut(s) | 1255 |
| EcoT22I | ATGCAT | 1 cut(s) | 900 |
| ErhI | CCWWGG | 1 cut(s) | 1255 |
| FaeI | CATG | 5 cut(s) | 66, 101, 999, 1130, 1305 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1389, 1421 |
| FaqI | GGGAC | 2 cut(s) | 215, 1127 |
| FatI | CATG | 5 cut(s) | 62, 97, 995, 1126, 1301 |
| FauNDI | CATATG | 1 cut(s) | 144 |
| FbaI | TGATCA | 2 cut(s) | 139, 361 |
| FokI | GGATG | 7 cut(s) | 21, 128, 459, 885, 1121, 1345, 1507 |
| FspBI | CTAG | 6 cut(s) | 447, 563, 642, 1187, 1329, 1750 |
| GlaI | GCGC | 2 cut(s) | 1123, 1592 |
| GsaI | CCCAGC | 3 cut(s) | 30, 236, 805 |
| GsuI | CTGGAG | 3 cut(s) | 437, 591, 860 |
| HaeII | RGCGCY | 1 cut(s) | 1125 |
| HaeIII | GGCC | 7 cut(s) | 226, 526, 763, 1070, 1204, 1227, 1254 |
| HgaI | GACGC | 1 cut(s) | 34 |
| HhaI | GCGC | 2 cut(s) | 1124, 1593 |
| Hin1II | CATG | 5 cut(s) | 66, 101, 999, 1130, 1305 |
| Hin6I | GCGC | 2 cut(s) | 1122, 1591 |
| HinP1I | GCGC | 2 cut(s) | 1122, 1591 |
| HinfI | GANTC | 6 cut(s) | 308, 1031, 1093, 1292, 1325, 1434 |
| HphI | GGTGA | 7 cut(s) | 149, 215, 257, 298, 505, 596, 1403 |
| Hpy166II | GTNNAC | 2 cut(s) | 1413, 1737 |
| Hpy188I | TCNGA | 8 cut(s) | 40, 69, 487, 618, 1087, 1168, 1310, 1725 |
| Hpy188III | TCNNGA | 5 cut(s) | 86, 365, 456, 570, 1289 |
| Hpy8I | GTNNAC | 2 cut(s) | 1413, 1737 |
| Hpy99I | CGWCG | 1 cut(s) | 50 |
| HpyAV | CCTTC | 3 cut(s) | 529, 750, 837 |
| HpyCH4III | ACNGT | 1 cut(s) | 1716 |
| HpyCH4IV | ACGT | 3 cut(s) | 1082, 1213, 1644 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 818, 827, 886, 895, 1005, 1076 |
| HpyF3I | CTNAG | 9 cut(s) | 37, 768, 815, 943, 1086, 1232, 1323, 1535, 1664 |
| HpySE526I | ACGT | 3 cut(s) | 1082, 1213, 1644 |
| Hsp92II | CATG | 5 cut(s) | 66, 101, 999, 1130, 1305 |
| HspAI | GCGC | 2 cut(s) | 1122, 1591 |
| Ksp22I | TGATCA | 2 cut(s) | 139, 361 |
| Kzo9I | GATC | 8 cut(s) | 139, 361, 613, 664, 736, 1243, 1381, 1658 |
| LmnI | GCTCC | 3 cut(s) | 749, 786, 1051 |
| LweI | GCATC | 6 cut(s) | 481, 885, 907, 947, 1066, 1529 |
| MaeI | CTAG | 6 cut(s) | 447, 563, 642, 1187, 1329, 1750 |
| MaeII | ACGT | 3 cut(s) | 1082, 1213, 1644 |
| MaeIII | GTNAC | 1 cut(s) | 1645 |
| MalI | GATC | 8 cut(s) | 141, 363, 615, 666, 738, 1245, 1383, 1660 |
| MbiI | CCGCTC | 1 cut(s) | 532 |
| MboI | GATC | 8 cut(s) | 139, 361, 613, 664, 736, 1243, 1381, 1658 |
| MfeI | CAATTG | 1 cut(s) | 744 |
| MflI | RGATCY | 2 cut(s) | 1243, 1658 |
| MhlI | GDGCHC | 1 cut(s) | 944 |
| MlsI | TGGCCA | 3 cut(s) | 526, 1070, 1254 |
| MluNI | TGGCCA | 3 cut(s) | 526, 1070, 1254 |
| MlyI | GAGTC | 1 cut(s) | 1334 |
| Mox20I | TGGCCA | 3 cut(s) | 526, 1070, 1254 |
| Mph1103I | ATGCAT | 1 cut(s) | 900 |
| MroXI | GAANNNNTTC | 1 cut(s) | 969 |
| MscI | TGGCCA | 3 cut(s) | 526, 1070, 1254 |
| MseI | TTAA | 7 cut(s) | 20, 168, 192, 399, 852, 984, 1179 |
| MslI | CAYNNNNRTG | 2 cut(s) | 1198, 1525 |
| Msp20I | TGGCCA | 3 cut(s) | 526, 1070, 1254 |
| MspA1I | CMGCKG | 2 cut(s) | 26, 1418 |
| MspCI | CTTAAG | 1 cut(s) | 191 |
| MspR9I | CCNGG | 2 cut(s) | 716, 759 |
| MunI | CAATTG | 1 cut(s) | 744 |
| Mva1269I | GAATGC | 2 cut(s) | 581, 702 |
| MvaI | CCWGG | 2 cut(s) | 716, 759 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 818, 827, 886, 895, 1005, 1076 |
| NdeI | CATATG | 1 cut(s) | 144 |
| NdeII | GATC | 8 cut(s) | 139, 361, 613, 664, 736, 1243, 1381, 1658 |
| NlaIII | CATG | 5 cut(s) | 66, 101, 999, 1130, 1305 |
| NlaIV | GGNNCC | 3 cut(s) | 806, 1228, 1357 |
| NsiI | ATGCAT | 1 cut(s) | 900 |
| NspI | RCATGY | 2 cut(s) | 66, 1305 |
| NspV | TTCGAA | 1 cut(s) | 317 |
| PceI | AGGCCT | 1 cut(s) | 226 |
| PciI | ACATGT | 1 cut(s) | 62 |
| PctI | GAATGC | 2 cut(s) | 581, 702 |
| PdmI | GAANNNNTTC | 1 cut(s) | 969 |
| PfeI | GAWTC | 5 cut(s) | 308, 1031, 1093, 1292, 1434 |
| PleI | GAGTC | 1 cut(s) | 1333 |
| PpsI | GAGTC | 1 cut(s) | 1333 |
| PscI | ACATGT | 1 cut(s) | 62 |
| PshAI | GACNNNNGTC | 1 cut(s) | 63 |
| Psp6I | CCWGG | 2 cut(s) | 714, 757 |
| PspFI | CCCAGC | 3 cut(s) | 26, 232, 801 |
| PspGI | CCWGG | 2 cut(s) | 714, 757 |
| PspN4I | GGNNCC | 3 cut(s) | 806, 1228, 1357 |
| PspPI | GGNCC | 4 cut(s) | 761, 805, 1203, 1226 |
| PstI | CTGCAG | 1 cut(s) | 1054 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1295 |
| PsuI | RGATCY | 2 cut(s) | 1243, 1658 |
| PvuII | CAGCTG | 1 cut(s) | 1418 |
| RsaI | GTAC | 1 cut(s) | 911 |
| RsaNI | GTAC | 1 cut(s) | 910 |
| RseI | CAYNNNNRTG | 2 cut(s) | 1198, 1525 |
| SaqAI | TTAA | 7 cut(s) | 20, 168, 192, 399, 852, 984, 1179 |
| Sau3AI | GATC | 8 cut(s) | 139, 361, 613, 664, 736, 1243, 1381, 1658 |
| Sau96I | GGNCC | 4 cut(s) | 761, 805, 1203, 1226 |
| SchI | GAGTC | 1 cut(s) | 1334 |
| ScrFI | CCNGG | 2 cut(s) | 716, 759 |
| SduI | GDGCHC | 1 cut(s) | 944 |
| SfaNI | GCATC | 6 cut(s) | 481, 885, 907, 947, 1066, 1529 |
| SfcI | CTRYAG | 2 cut(s) | 1050, 1116 |
| SfuI | TTCGAA | 1 cut(s) | 317 |
| SinI | GGWCC | 1 cut(s) | 805 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 1198, 1525 |
| SmlI | CTYRAG | 2 cut(s) | 191, 1131 |
| SmoI | CTYRAG | 2 cut(s) | 191, 1131 |
| SseBI | AGGCCT | 1 cut(s) | 226 |
| SsiI | CCGC | 2 cut(s) | 24, 532 |
| SspI | AATATT | 2 cut(s) | 404, 922 |
| SspMI | CTAG | 6 cut(s) | 447, 563, 642, 1187, 1329, 1750 |
| StuI | AGGCCT | 1 cut(s) | 226 |
| StyD4I | CCNGG | 2 cut(s) | 714, 757 |
| StyI | CCWWGG | 1 cut(s) | 1255 |
| TaaI | ACNGT | 1 cut(s) | 1716 |
| TaiI | ACGT | 3 cut(s) | 1085, 1216, 1647 |
| TaqI | TCGA | 7 cut(s) | 48, 172, 317, 955, 1384, 1692, 1746 |
| TfiI | GAWTC | 5 cut(s) | 308, 1031, 1093, 1292, 1434 |
| Tru1I | TTAA | 7 cut(s) | 20, 168, 192, 399, 852, 984, 1179 |
| Tru9I | TTAA | 7 cut(s) | 20, 168, 192, 399, 852, 984, 1179 |
| TscAI | CASTG | 5 cut(s) | 243, 944, 967, 1078, 1744 |
| TspDTI | ATGAA | 3 cut(s) | 363, 548, 1349 |
| TspGWI | ACGGA | 1 cut(s) | 465 |
| TspRI | CASTG | 5 cut(s) | 243, 944, 967, 1078, 1744 |
| Vha464I | CTTAAG | 1 cut(s) | 191 |
| VpaK11BI | GGWCC | 1 cut(s) | 805 |
| XapI | RAATTY | 2 cut(s) | 1465, 1495 |
| XceI | RCATGY | 2 cut(s) | 66, 1305 |
| XmnI | GAANNNNTTC | 1 cut(s) | 969 |
| XspI | CTAG | 6 cut(s) | 447, 563, 642, 1187, 1329, 1750 |
| Zsp2I | ATGCAT | 1 cut(s) | 900 |