Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb5

Orthogroup ID

OG0009819

Physical Location & Seq

Genomic Coordinates Forward (+)

1974902 .. 1983225

Gene Structure 8324 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_5g03310.t3

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2838 bp

ATGAGGGGTCATCAACGCCGATGGGCCTCGGACTCGGTCCCGGACAAGACGATAGCCAGCGGCACTACGTCTCCCGGGACCGAGTCCACCTCGGGAGAGGAGTTCGTCGAGGTGACCCTAGATTTGCAGGACGACAACACTATCGTCCTGCGCAGCGTCGAGCCGGCGACGGTGGTTAATATTCCCGACGACGGAGAGGCGACTCCGGCGTCTTCCTCGAGGTCGTCGTCGATAAGGCGGAGCTCGTCCAATAGTAGAATCCGGCAGTTTTCTCAGGAGCTGAAAGCGGAGGCGGTGGCCAAGGCTAAGCAGTTTTCACAGGAGCTGAAAGCCGAGCTGAAGCGATTCTCGTGGAGCCATGGAAATGCGTCGCGCGTGCTCGCTGCTTCTTCTGCGATTGCTTCTCAGAATAATGGAGGAGGCGCCGGGAGCGGTTACCATGACTCGGCTCTGGCGGCGAGGGCTCTGAGGAGGCAGAGGGCTCAGCTGGACCGAACCCGCTCCGGAGCGCAGAAAGCGCTCCGGGGACTGAGATTCATCAGCAACTGCAAGAGTAAGAGCAATGGCTTGGATGCATGGAACGAGGTCGAGAGCAATTTCTACAAGCTCGCCAAAGACGGCAACCTCTACCGTGCCGACTTCGCCCAATGCATAGGAATGAAAGATTCAAAGGAGTTTGCTCTGGAACTGTTTGATGCGCTCGGCCGGAGACGAAGATTGAAGGTGGATAAAATCAGCAAGGACGAGCTTTACGAGTTTTGGTCGCAAATTTCCGATCAGAGTTTCGATTCAAGACTTCAGATCTTCTTCGACATGGTGGACAAAAACGAAGATGGAAGAATTACCGAAGAAGAAGTGAAAGAGATCATCATGCTGAGTGCTTGCGCCAACAAGCTATCAAGATTGAAGGAACAAGCAGAGGAATATGCAGCTTTGATCATGGAAGAGTTGGATCCTGAGAGACTTGGCTATATTGAGCTATGGCAATTGGAGACCCTTTTGCTCCAAAAGGACACCTACCTAAACTACAGCCAAGCACTGAGCTACACGAGCCAAGCACTGAGCCAGAACCTCCAAGGCCTCCGAAGGAGAAGTCCAATACGCAGAATCAGCAGCAAATGCATTTACTACTTGCAAGAGAACTGGAAGAGGCTCTGGGTTTTGACACTCTGGGTGTGCATTATGATCGGACTCTTTACGTGGAAGTTCTTCCAGTACAAGCAGAAAAACTCGTTTCAGATAATGGGGTACTGTCTTCTCACGGCCAAGGGCGCGGCGGAGACGTTGAAGTTCAACATGGCTCTGGTGCTGTTACCGGTGTGTAGAAACACCATCACTTGGCTGAGGAACACCAGGGTCGGCTTCGTTGTGCCTTTCGATGATAATATCAACTTCCACAAGAGTATTGCTGCAGCCATTGTAATTGGTGTCATTCTCCATGCTGGGAATCATCTTGCTTGTGATTTTCCGAGGCTTATAAAGGTGCCAGAATCAGTTTATGAGGAGTATTTGCATGATGACTTTGGAACGCATAAACCGACATACTTGGATTTGGTTAAAGGTGCCGAGGGAGTGACTGGAATTTTAATGGTGATATGCATGACAATTGCTTTCACACTCGCAACAAAATGGTTCAGGCGGAGCCTCATTAAGCTGCCGAAGCCCTTCAATAGGCTCACTGGTTACAATGCATTCTGGTATTCTCATCACCTATTTGTCATCGTCTATGCCTTGCTCATTATCCATGGAGTCTTCCTCTATCTTGTGCACAAATGGTACCTGAAGACGACTTGGATGTATCTCTCCGTTCCAGTTTTACTATATGCTGGTGAAAGAATCCTGAGAGTCTTCCGGTCAGGCTTTTCTACTGTCCGGCTTCTCAAGGTTGCTATATATCCTGGAAATGTTCTCACATTGCAAATGTCTAAGCCACCTCAGTTTAAATACAAAAGTGGACAGTACATGTTTGTTCAGTGCCCAGCTGTTTCCCCATTTGAGTGGCATCCGTTTTCTATTACGTCTGCTCCCGGAGATGACTACCTTAGCGTTCACATCCGTCAGCTTGGTGACTGGACACAAGAGCTTAAGAGGGTATTCTCAGAAGCCTGTGAGCCTCCCTTAGCAGGGAAGAGTGGCCTACTAAGGGCTGATGAGACCACCAAGAAAAGTTTGCCCAAGCTTTTGATAGATGGACCTTATGGAGCGCCGGCACAAGACTATCGGAAGTATGATGTCCTGTTGCTTGTTGGACTTGGGATTGGGGCAACACCTTTCATTAGTATTTTGAAAGATTTGCTCAACAATATTGTCAAAATGGAGGAACAGGCAGATTCTCTCTCAGATTTCAGTAGAAATTCAGACCTAAGTTCAGGAAGTACAGATTCTCCCAACAAGCTTAATCCGAAACGAAAAAAGACTCTGAAGACCACTAATGCCTACTTCTATTGGGTAACTAGGGAACAAGGCTCATTTGATTGGTTCAAAGGAGTGATGAATGAAGTTGCGGATCAAGATCAAAGGGGTGTCATTGAGATGCACAACTACTTGACTAGTGTGTATGAAGAAGGCGACGCTCGATCAACACTAATCACCATGGTTCAAGCTCTCAACCATGCTAAGAATGGGGTTGACATTGTATCTGGCACTAGGGTTCGTACTCATTTTGCAAGGCCTAACTGGAAGAAAGTTTTCTCTAAATTTTGCTCCAAGCACTATGGTGCAAGGATAGGGGTATTCTATTGTGGAGCACCAGTTTTGGCCAAAGAACTCAGCAAGCTTTGCTATGAGTTCAATCAAAAAGGTCCAACCAAATTTGAATTTCACAAGGAGCACTTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000160 GO:0001101 GO:0002252 GO:0002376 GO:0002679 GO:0003674 GO:0003824 GO:0005575 GO:0005623 GO:0005886 GO:0006950 GO:0006952 GO:0006970 GO:0007154 GO:0007165 GO:0007231 GO:0008150 GO:0008152 GO:0009058 GO:0009628 GO:0009719 GO:0009723 GO:0009725 GO:0009737 GO:0009738 GO:0009755 GO:0009873 GO:0009987 GO:0010033 GO:0010119 GO:0010941 GO:0016020 GO:0016174 GO:0016491 GO:0016651 GO:0016999 GO:0017000 GO:0017144 GO:0023052 GO:0032870 GO:0033036 GO:0033037 GO:0033500 GO:0033554 GO:0033993 GO:0035556 GO:0042221 GO:0042592 GO:0042743 GO:0043067 GO:0043069 GO:0044237 GO:0044249 GO:0044464 GO:0045730 GO:0048519 GO:0048523 GO:0048878 GO:0050664 GO:0050665 GO:0050789 GO:0050794 GO:0050896 GO:0051179 GO:0051186 GO:0051188 GO:0051716 GO:0052542 GO:0052545 GO:0055114 GO:0060548 GO:0065007 GO:0065008 GO:0070887 GO:0071214 GO:0071215 GO:0071229 GO:0071310 GO:0071369 GO:0071396 GO:0071470 GO:0071495 GO:0071944 GO:0072593 GO:0097305 GO:0097306 GO:0104004 GO:1901700 GO:1901701 GO:1903409

KEGG Pathways

Metabolic & Signaling

ko04016 ko04626 map04016 map04626

Pfam Domains

Protein Families

FAD_binding_8 Ferric_reduct NADPH_Ox NAD_binding_6

Protein Analysis

946

Amino Acids

107.43

Weight (kDa)

9.24

Isoelectric Point (pI)

48.97

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Ferric_reduct	PF01794	195 - 341	1.5e-11	Ferric reductase like transmembrane component
FAD_binding_8	PF08022	385 - 499	1.5e-36	FAD-binding domain
NAD_binding_6	PF08030	505 - 689	1.1e-51	Ferric reductase NAD binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0009819)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G64060
fragaria_vesca	FvH4_5g03310 FvH4_5g03310 FvH4_5g03310 FvH4_5g03310
malus_domestica	MD06G1093000.v1.1 MD14G1113700.v1.1
prunus_persica	Prupe.5G107400_v2.0.a1
pyrus_communis	pycom06g08880
rosa_chinensis	RchiOBHm_Chr7g0196471
rosa_laevigata	RLG00000004012
rosa_multiflora	Rmu_co8333625.1_g000001 Rmu_sc0000736.1_g000003
rosa_roxburghii	Rroxscaffold_3G00259290
rosa_rugosa	Rorug07G0033600 Rorug07G0033700
rosa_samantha	Rh7AG158000 Rh7BG159900 Rh7CG166400 Rh7DG159200
rosa_wichuraiana	Rw7G013810

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1478
AasI	GACNNNNNNGTC	1 cut(s)	208
AbsI	CCTCGAGG	1 cut(s)	217
Acc16I	TGCGCA	1 cut(s)	152
Acc65I	GGTACC	1 cut(s)	1776
AccB1I	GGYRCC	4 cut(s)	422, 1483, 1562, 1776
AccB7I	CCANNNNNTGG	1 cut(s)	1338
AccBSI	CCGCTC	2 cut(s)	432, 501
AccII	CGCG	3 cut(s)	373, 375, 1274
AccIII	TCCGGA	1 cut(s)	503
AclWI	GGATC	3 cut(s)	947, 960, 2514
AcoI	YGGCCR	4 cut(s)	297, 703, 1263, 2757
AcsI	RAATTY	6 cut(s)	768, 1581, 2353, 2696, 2810, 2816
AcuI	CTGAAG	4 cut(s)	359, 782, 1802, 2441
AcyI	GRCGYC	2 cut(s)	209, 423
AfaI	GTAC	6 cut(s)	1217, 1250, 1778, 1961, 2377, 2656
AfeI	AGCGCT	1 cut(s)	519
AfiI	CCNNNNNNNGG	7 cut(s)	191, 445, 1338, 1671, 2123, 2124, 2143
AflII	CTTAAG	1 cut(s)	2084
AflIII	ACRYGT	1 cut(s)	1962
AgeI	ACCGGT	1 cut(s)	1315
AhlI	ACTAGT	1 cut(s)	2549
AjnI	CCWGG	2 cut(s)	1352, 1897
AleI	CACNNNNGTG	1 cut(s)	2715
Alw21I	GWGCWC	5 cut(s)	245, 381, 1770, 2749, 2832
Alw26I	GTCTC	6 cut(s)	75, 703, 955, 986, 1274, 2147
Alw44I	GTGCAC	1 cut(s)	1766
AlwI	GGATC	3 cut(s)	947, 960, 2514
AlwNI	CAGNNNCTG	3 cut(s)	280, 325, 546
Ama87I	CYCGRG	3 cut(s)	74, 91, 217
Aor13HI	TCCGGA	1 cut(s)	503
Aor51HI	AGCGCT	1 cut(s)	519
AoxI	GGCC	8 cut(s)	24, 297, 703, 1078, 1263, 2134, 2669, 2757
ApaLI	GTGCAC	1 cut(s)	1766
ApeKI	GCWGC	7 cut(s)	153, 383, 929, 1113, 1409, 1412, 1654
ApoI	RAATTY	6 cut(s)	768, 1581, 2353, 2696, 2810, 2816
ArsI	GACNNNNNNTTYG	4 cut(s)	106, 138, 1078, 1110
AsiGI	ACCGGT	1 cut(s)	1315
Asp700I	GAANNNNTTC	4 cut(s)	344, 1208, 1664, 2687
Asp718I	GGTACC	1 cut(s)	1776
AspLEI	GCGC	9 cut(s)	153, 375, 425, 511, 520, 700, 887, 1274, 2206
AspS9I	GGNCC	6 cut(s)	24, 37, 78, 490, 2192, 2801
AsuC2I	CCSGG	6 cut(s)	41, 75, 76, 427, 524, 2028
AsuHPI	GGTGA	6 cut(s)	124, 1603, 1700, 1841, 2078, 2581
AvaI	CYCGRG	3 cut(s)	74, 91, 217
AvaII	GGWCC	5 cut(s)	37, 78, 490, 2192, 2801
BaeGI	GKGCMC	2 cut(s)	1770, 1979
BalI	TGGCCA	2 cut(s)	299, 2759
BamHI	GGATCC	1 cut(s)	952
BanI	GGYRCC	4 cut(s)	422, 1483, 1562, 1776
BanII	GRGCYC	3 cut(s)	245, 466, 484
BauI	CACGAG	2 cut(s)	349, 1048
BbsI	GAAGAC	6 cut(s)	204, 1247, 1744, 1790, 1840, 2429
Bbv12I	GWGCWC	5 cut(s)	245, 381, 1770, 2749, 2832
BbvCI	CCTCAGC	1 cut(s)	1343
BbvI	GCAGC	7 cut(s)	165, 370, 941, 1125, 1396, 1424, 1641
BccI	CCATC	4 cut(s)	15, 827, 1340, 2183
BceAI	ACGGC	2 cut(s)	634, 1278
BcgI	CGANNNNNNTGC	2 cut(s)	1168, 1202
BciT130I	CCWGG	2 cut(s)	1354, 1899
BclI	TGATCA	1 cut(s)	936
BcnI	CCSGG	6 cut(s)	41, 75, 76, 427, 524, 2028
BcoDI	GTCTC	6 cut(s)	75, 703, 955, 986, 1274, 2147
BcuI	ACTAGT	1 cut(s)	2549
BfaI	CTAG	4 cut(s)	119, 2454, 2550, 2646
BfmI	CTRYAG	2 cut(s)	1027, 1410
BfoI	RGCGCY	3 cut(s)	426, 521, 2207
BfrI	CTTAAG	1 cut(s)	2084
BglII	AGATCT	1 cut(s)	801
BlpI	GCTNAGC	2 cut(s)	306, 483
Bme1390I	CCNGG	8 cut(s)	41, 75, 76, 427, 524, 1354, 1899, 2028
Bme18I	GGWCC	5 cut(s)	37, 78, 490, 2192, 2801
BmeT110I	CYCGRG	3 cut(s)	74, 91, 217
BmgT120I	GGNCC	6 cut(s)	24, 37, 78, 490, 2192, 2801
BmiI	GGNNCC	9 cut(s)	39, 79, 356, 424, 954, 1485, 1564, 1643, 1778
BmrFI	CCNGG	8 cut(s)	41, 75, 76, 427, 524, 1354, 1899, 2028
BmsI	GCATC	4 cut(s)	562, 685, 2011, 2523
BpiI	GAAGAC	6 cut(s)	204, 1247, 1744, 1790, 1840, 2429
BplI	GAGNNNNNCTC	4 cut(s)	74, 106, 1740, 1772
Bpu10I	CCTNAGC	3 cut(s)	1343, 2042, 2119
Bpu1102I	GCTNAGC	2 cut(s)	306, 483
BpuEI	CTTGAG	1 cut(s)	1865
BpuMI	CCSGG	6 cut(s)	41, 75, 76, 427, 524, 2028
BsaAI	YACGTR	1 cut(s)	1200
BsaBI	GATNNNNATC	1 cut(s)	2511
BsaHI	GRCGYC	2 cut(s)	209, 423
BsaI	GGTCTC	2 cut(s)	986, 2147
BsaWI	WCCGGW	3 cut(s)	503, 1315, 1851
BsaXI	ACNNNNNCTCC	8 cut(s)	55, 85, 2008, 2038, 2368, 2398, 2736, 2766
Bsc4I	CCNNNNNNNGG	7 cut(s)	191, 445, 1338, 1671, 2123, 2124, 2143
Bse118I	RCCGGY	3 cut(s)	163, 1315, 2206
Bse1I	ACTGG	8 cut(s)	1148, 1213, 1582, 1684, 1811, 2075, 2681, 2750
Bse3DI	GCAATG	2 cut(s)	568, 1913
Bse8I	GATNNNNATC	1 cut(s)	2511
BseAI	TCCGGA	1 cut(s)	503
BseBI	CCWGG	2 cut(s)	1354, 1899
BseGI	GGATG	4 cut(s)	577, 1800, 2002, 2052
BseJI	GATNNNNATC	1 cut(s)	2511
BseLI	CCNNNNNNNGG	7 cut(s)	191, 445, 1338, 1671, 2123, 2124, 2143
BseMI	GCAATG	2 cut(s)	568, 1913
BseNI	ACTGG	8 cut(s)	1148, 1213, 1582, 1684, 1811, 2075, 2681, 2750
BseRI	GAGGAG	4 cut(s)	113, 432, 484, 1517
BseSI	GKGCMC	2 cut(s)	1770, 1979
BseX3I	CGGCCG	1 cut(s)	703
BseXI	GCAGC	7 cut(s)	165, 370, 941, 1125, 1396, 1424, 1641
BseYI	CCCAGC	2 cut(s)	1442, 1978
Bsh1236I	CGCG	3 cut(s)	373, 375, 1274
Bsh1285I	CGRYCG	1 cut(s)	706
BshFI	GGCC	8 cut(s)	26, 299, 705, 1080, 1265, 2136, 2671, 2759
BshNI	GGYRCC	4 cut(s)	422, 1483, 1562, 1776
BshTI	ACCGGT	1 cut(s)	1315
BsiEI	CGRYCG	1 cut(s)	706
BsiHKAI	GWGCWC	5 cut(s)	245, 381, 1770, 2749, 2832
BsiHKCI	CYCGRG	3 cut(s)	74, 91, 217
BslFI	GGGAC	3 cut(s)	23, 91, 540
BslI	CCNNNNNNNGG	7 cut(s)	191, 445, 1338, 1671, 2123, 2124, 2143
BsmAI	GTCTC	6 cut(s)	75, 703, 955, 986, 1274, 2147
BsmBI	CGTCTC	3 cut(s)	75, 703, 1274
BsmFI	GGGAC	3 cut(s)	23, 91, 540
BsmI	GAATGC	1 cut(s)	1691
BsnI	GGCC	8 cut(s)	26, 299, 705, 1080, 1265, 2136, 2671, 2759
Bso31I	GGTCTC	2 cut(s)	986, 2147
BsoBI	CYCGRG	3 cut(s)	74, 91, 217
Bsp1286I	GDGCHC	8 cut(s)	245, 381, 466, 484, 1770, 1979, 2749, 2832
Bsp13I	TCCGGA	1 cut(s)	503
Bsp143I	GATC	9 cut(s)	775, 801, 864, 936, 952, 1185, 2506, 2512, 2576
Bsp1720I	GCTNAGC	2 cut(s)	306, 483
Bsp19I	CCATGG	3 cut(s)	358, 1744, 2592
BspANI	GGCC	8 cut(s)	26, 299, 705, 1080, 1265, 2136, 2671, 2759
BspEI	TCCGGA	1 cut(s)	503
BspFNI	CGCG	3 cut(s)	373, 375, 1274
BspLI	GGNNCC	9 cut(s)	39, 79, 356, 424, 954, 1485, 1564, 1643, 1778
BspMAI	CTGCAG	1 cut(s)	1414
BspPI	GGATC	3 cut(s)	947, 960, 2514
BspT107I	GGYRCC	4 cut(s)	422, 1483, 1562, 1776
BspTI	CTTAAG	1 cut(s)	2084
BspTNI	GGTCTC	2 cut(s)	986, 2147
BsrBI	CCGCTC	2 cut(s)	432, 501
BsrDI	GCAATG	2 cut(s)	568, 1913
BsrFI	RCCGGY	3 cut(s)	163, 1315, 2206
BsrI	ACTGG	8 cut(s)	1148, 1213, 1582, 1684, 1811, 2075, 2681, 2750
BssAI	RCCGGY	3 cut(s)	163, 1315, 2206
BssMI	GATC	9 cut(s)	775, 801, 864, 936, 952, 1185, 2506, 2512, 2576
BssNI	GRCGYC	2 cut(s)	209, 423
BssSI	CACGAG	2 cut(s)	349, 1048
BssT1I	CCWWGG	6 cut(s)	300, 358, 1075, 1266, 1744, 2592
Bst2BI	CACGAG	2 cut(s)	349, 1048
Bst2UI	CCWGG	2 cut(s)	1354, 1899
Bst4CI	ACNGT	6 cut(s)	172, 632, 690, 1253, 1870, 1959
Bst6I	CTCTTC	3 cut(s)	939, 1142, 2123
BstACI	GRCGYC	2 cut(s)	209, 423
BstAFI	CTTAAG	1 cut(s)	2084
BstAPI	GCANNNNNTGC	2 cut(s)	1119, 2778
BstBAI	YACGTR	1 cut(s)	1200
BstC8I	GCNNGC	8 cut(s)	58, 165, 377, 381, 609, 883, 2208, 2774
BstDSI	CCRYGG	3 cut(s)	358, 1744, 2592
BstEII	GGTNACC	2 cut(s)	112, 434
BstENI	CCTNNNNNAGG	1 cut(s)	1669
BstF5I	GGATG	4 cut(s)	577, 1800, 2002, 2052
BstFNI	CGCG	3 cut(s)	373, 375, 1274
BstH2I	RGCGCY	3 cut(s)	426, 521, 2207
BstHHI	GCGC	9 cut(s)	153, 375, 425, 511, 520, 700, 887, 1274, 2206
BstKTI	GATC	9 cut(s)	778, 804, 867, 939, 955, 1188, 2509, 2515, 2579
BstMAI	GTCTC	6 cut(s)	75, 703, 955, 986, 1274, 2147
BstMBI	GATC	9 cut(s)	775, 801, 864, 936, 952, 1185, 2506, 2512, 2576
BstMCI	CGRYCG	1 cut(s)	706
BstNI	CCWGG	2 cut(s)	1354, 1899
BstNSI	RCATGY	1 cut(s)	1966
BstPI	GGTNACC	2 cut(s)	112, 434
BstSCI	CCNGG	8 cut(s)	39, 73, 74, 425, 522, 1352, 1897, 2026
BstSFI	CTRYAG	2 cut(s)	1027, 1410
BstSLI	GKGCMC	2 cut(s)	1770, 1979
BstUI	CGCG	3 cut(s)	373, 375, 1274
BstV1I	GCAGC	7 cut(s)	165, 370, 941, 1125, 1396, 1424, 1641
BstV2I	GAAGAC	6 cut(s)	204, 1247, 1744, 1790, 1840, 2429
BstX2I	RGATCY	2 cut(s)	801, 952
BstXI	CCANNNNNNTGG	1 cut(s)	1998
BstYI	RGATCY	2 cut(s)	801, 952
BstZI	CGGCCG	1 cut(s)	703
BsuRI	GGCC	8 cut(s)	26, 299, 705, 1080, 1265, 2136, 2671, 2759
BtgI	CCRYGG	3 cut(s)	358, 1744, 2592
BtsCI	GGATG	4 cut(s)	577, 1800, 2002, 2052
BtsIMutI	CAGTG	4 cut(s)	1037, 1058, 1677, 1979
Cac8I	GCNNGC	8 cut(s)	58, 165, 377, 381, 609, 883, 2208, 2774
CaiI	CAGNNNCTG	3 cut(s)	280, 325, 546
CfoI	GCGC	9 cut(s)	153, 375, 425, 511, 520, 700, 887, 1274, 2206
Cfr10I	RCCGGY	3 cut(s)	163, 1315, 2206
Cfr13I	GGNCC	6 cut(s)	24, 37, 78, 490, 2192, 2801
Cfr9I	CCCGGG	1 cut(s)	74
CseI	GACGC	4 cut(s)	145, 198, 357, 2579
Csp6I	GTAC	6 cut(s)	1216, 1249, 1777, 1960, 2376, 2655
CspAI	ACCGGT	1 cut(s)	1315
CviQI	GTAC	6 cut(s)	1216, 1249, 1777, 1960, 2376, 2655
DinI	GGCGCC	1 cut(s)	424
DpnI	GATC	9 cut(s)	777, 803, 866, 938, 954, 1187, 2508, 2514, 2578
DpnII	GATC	9 cut(s)	775, 801, 864, 936, 952, 1185, 2506, 2512, 2576
DraI	TTTAAA	1 cut(s)	1942
DrdI	GACNNNNNNGTC	1 cut(s)	208
DseDI	GACNNNNNNGTC	1 cut(s)	208
EaeI	YGGCCR	4 cut(s)	297, 703, 1263, 2757
EagI	CGGCCG	1 cut(s)	703
Eam1104I	CTCTTC	3 cut(s)	939, 1142, 2123
EarI	CTCTTC	3 cut(s)	939, 1142, 2123
EciI	GGCGGA	3 cut(s)	253, 1292, 1654
Ecl136II	GAGCTC	1 cut(s)	243
EclXI	CGGCCG	1 cut(s)	703
Eco130I	CCWWGG	6 cut(s)	300, 358, 1075, 1266, 1744, 2592
Eco147I	AGGCCT	2 cut(s)	1080, 2671
Eco24I	GRGCYC	3 cut(s)	245, 466, 484
Eco31I	GGTCTC	2 cut(s)	986, 2147
Eco47I	GGWCC	5 cut(s)	37, 78, 490, 2192, 2801
Eco47III	AGCGCT	1 cut(s)	519
Eco52I	CGGCCG	1 cut(s)	703
Eco53kI	GAGCTC	1 cut(s)	243
Eco57I	CTGAAG	4 cut(s)	359, 782, 1802, 2441
Eco88I	CYCGRG	3 cut(s)	74, 91, 217
Eco91I	GGTNACC	2 cut(s)	112, 434
EcoICRI	GAGCTC	1 cut(s)	243
EcoNI	CCTNNNNNAGG	1 cut(s)	1669
EcoO65I	GGTNACC	2 cut(s)	112, 434
EcoRII	CCWGG	2 cut(s)	1352, 1897
EcoT14I	CCWWGG	6 cut(s)	300, 358, 1075, 1266, 1744, 2592
EcoT22I	ATGCAT	5 cut(s)	577, 653, 1124, 1601, 1693
EcoT38I	GRGCYC	3 cut(s)	245, 466, 484
EgeI	GGCGCC	1 cut(s)	424
EheI	GGCGCC	1 cut(s)	424
ErhI	CCWWGG	6 cut(s)	300, 358, 1075, 1266, 1744, 2592
Esp3I	CGTCTC	3 cut(s)	75, 703, 1274
FalI	AAGNNNNNCTT	1 cut(s)	2816
FaqI	GGGAC	3 cut(s)	23, 91, 540
FauI	CCCGC	1 cut(s)	506
FbaI	TGATCA	1 cut(s)	936
FokI	GGATG	4 cut(s)	584, 1807, 1989, 2039
FriOI	GRGCYC	3 cut(s)	245, 466, 484
FspBI	CTAG	4 cut(s)	119, 2454, 2550, 2646
FspI	TGCGCA	1 cut(s)	152
GlaI	GCGC	9 cut(s)	152, 374, 424, 510, 519, 699, 886, 1273, 2205
GsaI	CCCAGC	2 cut(s)	1446, 1982
HaeII	RGCGCY	3 cut(s)	426, 521, 2207
HaeIII	GGCC	8 cut(s)	26, 299, 705, 1080, 1265, 2136, 2671, 2759
HgaI	GACGC	4 cut(s)	145, 198, 357, 2579
HhaI	GCGC	9 cut(s)	153, 375, 425, 511, 520, 700, 887, 1274, 2206
Hin1I	GRCGYC	2 cut(s)	209, 423
Hin6I	GCGC	9 cut(s)	151, 373, 423, 509, 518, 698, 885, 1272, 2204
HinP1I	GCGC	9 cut(s)	151, 373, 423, 509, 518, 698, 885, 1272, 2204
HincII	GTYRAC	1 cut(s)	2629
HindII	GTYRAC	1 cut(s)	2629
HindIII	AAGCTT	3 cut(s)	2177, 2393, 2774
HphI	GGTGA	6 cut(s)	124, 1603, 1700, 1841, 2078, 2581
Hpy166II	GTNNAC	6 cut(s)	87, 820, 1768, 1955, 2050, 2629
Hpy8I	GTNNAC	6 cut(s)	87, 820, 1768, 1955, 2050, 2629
Hpy99I	CGWCG	9 cut(s)	110, 161, 172, 191, 194, 229, 232, 373, 2573
HpyAV	CCTTC	5 cut(s)	715, 901, 1080, 1675, 2558
HpyCH4III	ACNGT	6 cut(s)	172, 632, 690, 1253, 1870, 1959
HpyCH4IV	ACGT	4 cut(s)	68, 1199, 1283, 2018
HpySE526I	ACGT	4 cut(s)	68, 1199, 1283, 2018
Hsp92I	GRCGYC	2 cut(s)	209, 423
HspAI	GCGC	9 cut(s)	151, 373, 423, 509, 518, 698, 885, 1272, 2204
KasI	GGCGCC	1 cut(s)	422
Kpn2I	TCCGGA	1 cut(s)	503
KpnI	GGTACC	1 cut(s)	1780
KroI	GCCGGC	2 cut(s)	163, 2206
KroNI	GCCGGC	2 cut(s)	165, 2208
Ksp22I	TGATCA	1 cut(s)	936
Kzo9I	GATC	9 cut(s)	775, 801, 864, 936, 952, 1185, 2506, 2512, 2576
Lsp1109I	GCAGC	7 cut(s)	165, 370, 941, 1125, 1396, 1424, 1641
LweI	GCATC	4 cut(s)	562, 685, 2011, 2523
MaeI	CTAG	4 cut(s)	119, 2454, 2550, 2646
MaeII	ACGT	4 cut(s)	68, 1199, 1283, 2018
MaeIII	GTNAC	7 cut(s)	112, 434, 1311, 1573, 1682, 2066, 2449
MalI	GATC	9 cut(s)	777, 803, 866, 938, 954, 1187, 2508, 2514, 2578
MbiI	CCGCTC	2 cut(s)	432, 501
MboI	GATC	9 cut(s)	775, 801, 864, 936, 952, 1185, 2506, 2512, 2576
MfeI	CAATTG	2 cut(s)	986, 1605
MflI	RGATCY	2 cut(s)	801, 952
MhlI	GDGCHC	8 cut(s)	245, 381, 466, 484, 1770, 1979, 2749, 2832
MlsI	TGGCCA	2 cut(s)	299, 2759
MluNI	TGGCCA	2 cut(s)	299, 2759
Mly113I	GGCGCC	1 cut(s)	423
MlyI	GAGTC	8 cut(s)	26, 92, 196, 437, 1185, 1758, 1854, 2410
MmeI	TCCRAC	3 cut(s)	930, 2227, 2828
Mox20I	TGGCCA	2 cut(s)	299, 2759
Mph1103I	ATGCAT	5 cut(s)	577, 653, 1124, 1601, 1693
MroI	TCCGGA	1 cut(s)	503
MroNI	GCCGGC	2 cut(s)	163, 2206
MroXI	GAANNNNTTC	4 cut(s)	344, 1208, 1664, 2687
MscI	TGGCCA	2 cut(s)	299, 2759
MseI	TTAA	7 cut(s)	177, 1557, 1586, 1650, 1941, 2085, 2397
MslI	CAYNNNNRTG	5 cut(s)	363, 656, 1996, 2531, 2715
Msp20I	TGGCCA	2 cut(s)	299, 2759
MspA1I	CMGCKG	3 cut(s)	60, 487, 1982
MspCI	CTTAAG	1 cut(s)	2084
MspR9I	CCNGG	8 cut(s)	41, 75, 76, 427, 524, 1354, 1899, 2028
MunI	CAATTG	2 cut(s)	986, 1605
Mva1269I	GAATGC	1 cut(s)	1691
MvaI	CCWGG	2 cut(s)	1354, 1899
MvnI	CGCG	3 cut(s)	373, 375, 1274
NaeI	GCCGGC	2 cut(s)	165, 2208
NarI	GGCGCC	1 cut(s)	423
NciI	CCSGG	6 cut(s)	41, 75, 76, 427, 524, 2028
NcoI	CCATGG	3 cut(s)	358, 1744, 2592
NdeII	GATC	9 cut(s)	775, 801, 864, 936, 952, 1185, 2506, 2512, 2576
NgoMIV	GCCGGC	2 cut(s)	163, 2206
NlaIV	GGNNCC	9 cut(s)	39, 79, 356, 424, 954, 1485, 1564, 1643, 1778
NmeAIII	GCCGAG	4 cut(s)	358, 425, 681, 1591
NmuCI	GTSAC	3 cut(s)	112, 1573, 2066
NsbI	TGCGCA	1 cut(s)	152
NsiI	ATGCAT	5 cut(s)	577, 653, 1124, 1601, 1693
NspI	RCATGY	1 cut(s)	1966
OliI	CACNNNNGTG	1 cut(s)	2715
PaeR7I	CTCGAG	1 cut(s)	217
PceI	AGGCCT	2 cut(s)	1080, 2671
PciI	ACATGT	1 cut(s)	1962
PcsI	WCGNNNNNNNCGW	3 cut(s)	224, 750, 1535
PctI	GAATGC	1 cut(s)	1691
PdiI	GCCGGC	2 cut(s)	165, 2208
PdmI	GAANNNNTTC	4 cut(s)	344, 1208, 1664, 2687
PflFI	GACNNNGTC	2 cut(s)	35, 82
PflMI	CCANNNNNTGG	1 cut(s)	1338
PfoI	TCCNGGA	3 cut(s)	39, 1897, 2026
PinAI	ACCGGT	1 cut(s)	1315
PleI	GAGTC	8 cut(s)	26, 91, 196, 437, 1185, 1757, 1853, 2410
PluTI	GGCGCC	1 cut(s)	426
PpsI	GAGTC	8 cut(s)	26, 91, 196, 437, 1185, 1757, 1853, 2410
Ppu21I	YACGTR	1 cut(s)	1200
PscI	ACATGT	1 cut(s)	1962
PsiI	TTATAA	1 cut(s)	1478
Psp124BI	GAGCTC	1 cut(s)	245
Psp6I	CCWGG	2 cut(s)	1352, 1897
PspEI	GGTNACC	2 cut(s)	112, 434
PspFI	CCCAGC	2 cut(s)	1442, 1978
PspGI	CCWGG	2 cut(s)	1352, 1897
PspN4I	GGNNCC	9 cut(s)	39, 79, 356, 424, 954, 1485, 1564, 1643, 1778
PspPI	GGNCC	6 cut(s)	24, 37, 78, 490, 2192, 2801
PspXI	VCTCGAGB	1 cut(s)	217
PstI	CTGCAG	1 cut(s)	1414
PstNI	CAGNNNCTG	3 cut(s)	280, 325, 546
PsuI	RGATCY	2 cut(s)	801, 952
PsyI	GACNNNGTC	2 cut(s)	35, 82
PvuII	CAGCTG	2 cut(s)	487, 1982
RsaI	GTAC	6 cut(s)	1217, 1250, 1778, 1961, 2377, 2656
RsaNI	GTAC	6 cut(s)	1216, 1249, 1777, 1960, 2376, 2655
RseI	CAYNNNNRTG	5 cut(s)	363, 656, 1996, 2531, 2715
SacI	GAGCTC	1 cut(s)	245
SaqAI	TTAA	7 cut(s)	177, 1557, 1586, 1650, 1941, 2085, 2397
Sau3AI	GATC	9 cut(s)	775, 801, 864, 936, 952, 1185, 2506, 2512, 2576
Sau96I	GGNCC	6 cut(s)	24, 37, 78, 490, 2192, 2801
SchI	GAGTC	8 cut(s)	26, 92, 196, 437, 1185, 1758, 1854, 2410
ScrFI	CCNGG	8 cut(s)	41, 75, 76, 427, 524, 1354, 1899, 2028
SduI	GDGCHC	8 cut(s)	245, 381, 466, 484, 1770, 1979, 2749, 2832
SfaNI	GCATC	4 cut(s)	562, 685, 2011, 2523
SfcI	CTRYAG	2 cut(s)	1027, 1410
SfoI	GGCGCC	1 cut(s)	424
Sfr274I	CTCGAG	1 cut(s)	217
SinI	GGWCC	5 cut(s)	37, 78, 490, 2192, 2801
SlaI	CTCGAG	1 cut(s)	217
SmaI	CCCGGG	1 cut(s)	76
SmiMI	CAYNNNNRTG	5 cut(s)	363, 656, 1996, 2531, 2715
SmlI	CTYRAG	3 cut(s)	217, 1880, 2084
SmoI	CTYRAG	3 cut(s)	217, 1880, 2084
SpeI	ACTAGT	1 cut(s)	2549
SseBI	AGGCCT	2 cut(s)	1080, 2671
SspDI	GGCGCC	1 cut(s)	422
SspI	AATATT	2 cut(s)	181, 2305
SspMI	CTAG	4 cut(s)	119, 2454, 2550, 2646
SstI	GAGCTC	1 cut(s)	245
StuI	AGGCCT	2 cut(s)	1080, 2671
StyD4I	CCNGG	8 cut(s)	39, 73, 74, 425, 522, 1352, 1897, 2026
StyI	CCWWGG	6 cut(s)	300, 358, 1075, 1266, 1744, 2592
TaaI	ACNGT	6 cut(s)	172, 632, 690, 1253, 1870, 1959
TaiI	ACGT	4 cut(s)	71, 1202, 1286, 2021
TaqI	TCGA	9 cut(s)	108, 159, 218, 230, 588, 786, 810, 1377, 2575
TaqII	GACCGA	3 cut(s)	25, 95, 507
TatI	WGTACW	3 cut(s)	1215, 1959, 2375
TauI	GCSGC	3 cut(s)	63, 458, 1277
Tru1I	TTAA	7 cut(s)	177, 1557, 1586, 1650, 1941, 2085, 2397
Tru9I	TTAA	7 cut(s)	177, 1557, 1586, 1650, 1941, 2085, 2397
TscAI	CASTG	4 cut(s)	1044, 1065, 1684, 1979
TseFI	GTSAC	3 cut(s)	112, 1573, 2066
TseI	GCWGC	7 cut(s)	153, 383, 929, 1113, 1409, 1412, 1654
Tsp45I	GTSAC	3 cut(s)	112, 1573, 2066
TspDTI	ATGAA	6 cut(s)	526, 674, 2263, 2507, 2511, 2574
TspGWI	ACGGA	4 cut(s)	207, 1795, 1995, 2045
TspMI	CCCGGG	1 cut(s)	74
TspRI	CASTG	4 cut(s)	1044, 1065, 1684, 1979
Tth111I	GACNNNGTC	2 cut(s)	35, 82
Van91I	CCANNNNNTGG	1 cut(s)	1338
Vha464I	CTTAAG	1 cut(s)	2084
VneI	GTGCAC	1 cut(s)	1766
VpaK11BI	GGWCC	5 cut(s)	37, 78, 490, 2192, 2801
XagI	CCTNNNNNAGG	1 cut(s)	1669
XapI	RAATTY	6 cut(s)	768, 1581, 2353, 2696, 2810, 2816
XceI	RCATGY	1 cut(s)	1966
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2618
XhoI	CTCGAG	1 cut(s)	217
XmaI	CCCGGG	1 cut(s)	74
XmnI	GAANNNNTTC	4 cut(s)	344, 1208, 1664, 2687
XspI	CTAG	4 cut(s)	119, 2454, 2550, 2646
Zsp2I	ATGCAT	5 cut(s)	577, 653, 1124, 1601, 1693

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.