Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp05

Orthogroup ID

OG0009819

Physical Location & Seq

Genomic Coordinates Forward (+)

11330829 .. 11339642

Gene Structure 8814 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.5G107400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2895 bp

ATGAGGTCTCATCCGAGGCACGAGCGCCGATGGGCCTCGGACTCGGTTCCCGAGAAGTCGCTTGTCAGCGCCGGAACGTCGCCGGCCATGACCGAAGATTCAAGCTCGGGAGCCGATCAGGAATTCGTAGAAGTAACTCTCGATTTACAGGACGACAACACCATCGTCCTCCGCAGCGTCGAGCCTGCCACCGTCATTCACGTCGATGACCTCGCCGGCGTCGGAGCCTCACCCGGAACAGAAACTCCGGCTTCTGCCTCAGCCTCGGTTTCCCGGTCGCCGTCGACGATGCGCCGAAGCTCCTCCAACAATCGAATACGCCAGTTCTCTCAGGAGCTGAAAGCGGAGGCGGTGGCGAAGGCGAAGCAGTTCTCTCAGGAGCTTAAAGCCGAGCTGCGGAGGTTCTCGTGGAGCCATGGCCACGCCTCGCGCGTTTTGTCTGCTTCGGCTTCTCAGAATGCCGGTGCCGGAACCTCCACCGGCACGTTCGACTCGGCGCTGGCGGCTCGGGCGCTGAGACGGCAGCGAGCTCAGCTGGACCGCACTCGGTCCGGCGCGCAGAAGGCGCTTCGCGGGCTGAGGTTCATCAGCAACTGCAAGAGCACGAAGACCAATGGAGTCGATGCCTGGAACGACGTCGAGGCCAGCTTCAATAAGCTCGCCAAAGACGGCCAGCTCCTCCGCGCCGATTTTGCTCAATGCATCGGAATGAGAGATTCGAAGGAGTTTGCTCTGGAGCTGTTCGATGCGTTGGGCCGGAGACGGAGAATGAAGGTTGACAAAATCAGCAAGGACGAGCTTTACGAGTTCTGGTCCCAAATTTCCGATCAAAGCTTCGATTCGCGGCTTCAGATCTTCTTCGACATGGTGGACAAGAATGAAGATGGTAGAATTACTGAAGAGGAAGTAAAAGAGATTATCATGTTGAGTGCCTCTGCAAACAAGCTATCGAGATTGAAGGAACAAGCAGAGGAATATGCAGCTCTCATCATGGAAGAGTTGGATCCCGAAAGACTTGGCTACATTGAGCTGTGGCAATTGGAAACCCTTCTACTACAGAAGGACACGTACCTAAACTACAGCCAAGCACTGAGCTACACGAGCCAAGCTCTAAGCCAAAACCTCCAAGGGCTGAGAAGGAGAAGTCCAATACGCAGAATGAGCACAAAACTGCTCTATTATTTGCAGGAAAACTGGAGGAGAGTCTGGGTTTTGACATTGTGGGTTGCCATTATGATCGGGCTCTTCACGTGGAAGTTCTACCAGTACAAGCAGAAAAAAGCTTTTCATGTAATGGGTTATTGCCTTCTCACGGCTAAGGGCGCTGCCGAGACTTTGAAATTCAACATGGCTCTGGTGCTCTTGCCTGTTTGTCGAAACACCATCACTTGGCTCAGGAACACCAGGCTAGGGTTCTTTGTGCCTTTTGACGACAACATCAACTTCCACAAGACCATTGCTGCAGCCATTGTAGTTGGTGTCATTCTCCATGCTGGGAACCATCTTGCCTGTGATTTTCCAAGGCTTATAGAGGTCTCCAAATCGGACTACGACAAGTATTTGGTTCAAGACTTTGGAAAACATAAACCCAAATATATAGATTTGATCAAAGGAGCTGAGGGCGTGACTGGAATTATAATGCTGACATGCATGATAATTGCTTTCACACTCGCTACACGATGGTTCAGGCGCAGCATTATTAAGCTTCCCAAGCCCTTTAACAGGCTCACTGGCTTCAATGCATTCTGGTATTCCCATCACTTATTTGTCATTGTCTACGCCTTGCTCATTATCCACGGCGTTTTCCTCTATATGGTGCACACATGGTACCTTAAGACGACTTGGATGTATATTTCTGTTCCTATTTTACTATATGCTGGAGAAAGGACCCTGAGAATCTTCCGGTCTGGCTTCTATACTGTTCGACTTCTGAAGGTTGCTATTTATCCTGGAAATGTTCTCACACTGCAAATGTCTAAGCCTCCCCAGTTCAAATACAAAAGTGGACAGTACATGTTTGTCCAGTGCCCAGCTGTTTCTCCCTTTGAGTGGCATCCATTTTCGATTACATCAGCTCCCGGTGACGACTACCTTAGCGTTCACATCCGCCAGCTTGGTGACTGGACACAAGAGCTTAAGAGGGTTTTCTCAGAAGCCTGTGAGCCTCCCTTAGCTGGGAAGAGCGGCCTGCTAAGGGCTGATGAAACAACCAAGACAAGTTTGCCCAAGCTTTTAATAGATGGACCTTATGGTGCCCCAGCACAAGATTACCGGAAATATGATGTCCTGCTACTTGTTGGTCTTGGAATCGGCGCAACGCCTTTCATCAGTATTCTAAAAGATTTGCTCAATAATATTGTCAAAATGGAAGAGCAGGCAGACTCTGTTTCAGATATGAGTAGAGCATCAGACCTAAGTGCTGGGAGTACAGATTCTCCGAATCCAAACAAGGTTTATCCGAAACGGAAAAAGACTTTGAAGACCACCAATGCCTACTTTTATTGGGTGACGAGGGAGCAAGGCTCATTTGATTGGTTCAAAGGAGTGATGAATGAAGTTGCAGAACAGGATCAAAGGGGTGTTATTGAGATGCACAACTACTTGACTAGCGTGTACGAAGAAGGCGACGCTCGATCAACACTCATCACCATGGTCCAAGCTCTCAACCATGCTAAGAATGGGGTTGACATTGTGTCTGGCACAAGGGTAAGAACCCATTTTGCAAGGCCTAATTGGAAGAAAGTTTTCTCAAAAACTTGCTCAAAGCACTGTAATGCAAGGATTGGTGTTTTCTATTGTGGAGCACCAGTTTTGGCCAAAGAACTTAGCCAGCTCTGCTATGAGTTCAATCAAAAAGGTTCAACCAAGTTCGAATTCCACAAGGAGCACTTTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000160 GO:0001101 GO:0002252 GO:0002376 GO:0002679 GO:0003674 GO:0003824 GO:0005575 GO:0005623 GO:0005886 GO:0006950 GO:0006952 GO:0006970 GO:0007154 GO:0007165 GO:0007231 GO:0008150 GO:0008152 GO:0009058 GO:0009628 GO:0009719 GO:0009723 GO:0009725 GO:0009737 GO:0009738 GO:0009755 GO:0009873 GO:0009987 GO:0010033 GO:0010119 GO:0010941 GO:0016020 GO:0016174 GO:0016491 GO:0016651 GO:0016999 GO:0017000 GO:0017144 GO:0023052 GO:0032870 GO:0033036 GO:0033037 GO:0033500 GO:0033554 GO:0033993 GO:0035556 GO:0042221 GO:0042592 GO:0042743 GO:0043067 GO:0043069 GO:0044237 GO:0044249 GO:0044464 GO:0045730 GO:0048519 GO:0048523 GO:0048878 GO:0050664 GO:0050665 GO:0050789 GO:0050794 GO:0050896 GO:0051179 GO:0051186 GO:0051188 GO:0051716 GO:0052542 GO:0052545 GO:0055114 GO:0060548 GO:0065007 GO:0065008 GO:0070887 GO:0071214 GO:0071215 GO:0071229 GO:0071310 GO:0071369 GO:0071396 GO:0071470 GO:0071495 GO:0071944 GO:0072593 GO:0097305 GO:0097306 GO:0104004 GO:1901700 GO:1901701 GO:1903409

KEGG Pathways

Metabolic & Signaling

ko04016 ko04626 map04016 map04626

Pfam Domains

Protein Families

FAD_binding_8 Ferric_reduct NADPH_Ox NAD_binding_6

Protein Analysis

965

Amino Acids

109.48

Weight (kDa)

9.32

Isoelectric Point (pI)

51.11

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009819)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G64060
fragaria_vesca	FvH4_5g03310 FvH4_5g03310 FvH4_5g03310 FvH4_5g03310
malus_domestica	MD06G1093000.v1.1 MD14G1113700.v1.1
prunus_persica	Prupe.5G107400_v2.0.a1
pyrus_communis	pycom06g08880
rosa_chinensis	RchiOBHm_Chr7g0196471
rosa_laevigata	RLG00000004012
rosa_multiflora	Rmu_co8333625.1_g000001 Rmu_sc0000736.1_g000003
rosa_roxburghii	Rroxscaffold_3G00259290
rosa_rugosa	Rorug07G0033600 Rorug07G0033700
rosa_samantha	Rh7AG158000 Rh7BG159900 Rh7CG166400 Rh7DG159200
rosa_wichuraiana	Rw7G013810

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1637
AatII	GACGTC	1 cut(s)	639
Acc65I	GGTACC	1 cut(s)	1827
AccB1I	GGYRCC	3 cut(s)	464, 1827, 2252
AccB7I	CCANNNNNTGG	1 cut(s)	1389
AccBSI	CCGCTC	1 cut(s)	2184
AccI	GTMKAC	2 cut(s)	284, 1776
AccII	CGCG	6 cut(s)	430, 432, 557, 573, 684, 844
AclWI	GGATC	3 cut(s)	998, 1011, 2577
AcoI	YGGCCR	4 cut(s)	84, 418, 670, 2814
AcsI	RAATTY	4 cut(s)	122, 819, 1340, 2873
AcuI	CTGAAG	3 cut(s)	833, 918, 1952
AcvI	CACGTG	1 cut(s)	1251
AcyI	GRCGYC	2 cut(s)	219, 636
AfaI	GTAC	6 cut(s)	1070, 1268, 1829, 2012, 2428, 2615
AflII	CTTAAG	2 cut(s)	1832, 2135
AflIII	ACRYGT	2 cut(s)	1065, 2013
AhdI	GACNNNNNGTC	1 cut(s)	2692
AjiI	CACGTC	1 cut(s)	202
AjnI	CCWGG	3 cut(s)	626, 1403, 1948
AjuI	GAANNNNNNNTTGG	2 cut(s)	2858, 2890
AloI	GAACNNNNNNTCC	2 cut(s)	229, 261
Alw21I	GWGCWC	7 cut(s)	532, 605, 1166, 1362, 1821, 2806, 2889
Alw26I	GTCTC	5 cut(s)	12, 511, 754, 1325, 1540
Alw44I	GTGCAC	1 cut(s)	1817
AlwI	GGATC	3 cut(s)	998, 1011, 2577
AlwNI	CAGNNNCTG	3 cut(s)	337, 594, 2384
Ama87I	CYCGRG	3 cut(s)	50, 106, 507
AoxI	GGCC	9 cut(s)	33, 84, 418, 642, 670, 754, 2185, 2726, 2814
ApaLI	GTGCAC	1 cut(s)	1817
ApeKI	GCWGC	8 cut(s)	174, 394, 523, 980, 1325, 1460, 1463, 1692
ApoI	RAATTY	4 cut(s)	122, 819, 1340, 2873
Asp700I	GAANNNNTTC	3 cut(s)	368, 1047, 2744
Asp718I	GGTACC	1 cut(s)	1827
AspS9I	GGNCC	8 cut(s)	33, 538, 549, 754, 813, 1887, 2243, 2653
AsuC2I	CCSGG	3 cut(s)	234, 274, 2079
AsuHPI	GGTGA	5 cut(s)	222, 2093, 2129, 2518, 2638
AsuII	TTCGAA	2 cut(s)	719, 2871
AvaI	CYCGRG	3 cut(s)	50, 106, 507
AvaII	GGWCC	6 cut(s)	538, 549, 813, 1887, 2243, 2653
BaeGI	GKGCMC	3 cut(s)	1821, 2030, 2257
BalI	TGGCCA	2 cut(s)	420, 2816
BamHI	GGATCC	1 cut(s)	1003
BanI	GGYRCC	3 cut(s)	464, 1827, 2252
BanII	GRGCYC	2 cut(s)	532, 1245
BarI	GAAGNNNNNNTAC	2 cut(s)	1052, 1084
BauI	CACGAG	3 cut(s)	20, 406, 1099
BbrPI	CACGTG	1 cut(s)	1251
BbsI	GAAGAC	2 cut(s)	614, 2486
Bbv12I	GWGCWC	7 cut(s)	532, 605, 1166, 1362, 1821, 2806, 2889
BbvCI	CCTCAGC	3 cut(s)	259, 578, 1617
BbvI	GCAGC	8 cut(s)	186, 381, 535, 992, 1312, 1447, 1475, 1704
BccI	CCATC	8 cut(s)	24, 170, 878, 1391, 1509, 1674, 1764, 2234
BceAI	ACGGC	5 cut(s)	265, 536, 685, 1329, 1813
BciT130I	CCWGG	3 cut(s)	628, 1405, 1950
BclI	TGATCA	1 cut(s)	1605
BcnI	CCSGG	3 cut(s)	234, 274, 2079
BcoDI	GTCTC	5 cut(s)	12, 511, 754, 1325, 1540
BfaI	CTAG	2 cut(s)	1409, 2607
BfmI	CTRYAG	3 cut(s)	1055, 1078, 1461
BfoI	RGCGCY	6 cut(s)	28, 72, 500, 515, 569, 1326
BfrI	CTTAAG	2 cut(s)	1832, 2135
BglII	AGATCT	1 cut(s)	852
BlpI	GCTNAGC	1 cut(s)	531
Bme1390I	CCNGG	6 cut(s)	234, 274, 628, 1405, 1950, 2079
Bme18I	GGWCC	6 cut(s)	538, 549, 813, 1887, 2243, 2653
BmeRI	GACNNNNNGTC	1 cut(s)	2692
BmeT110I	CYCGRG	3 cut(s)	50, 106, 507
BmgBI	CACGTC	1 cut(s)	202
BmgT120I	GGNCC	8 cut(s)	33, 538, 549, 754, 813, 1887, 2243, 2653
BmrFI	CCNGG	6 cut(s)	234, 274, 628, 1405, 1950, 2079
BmrI	ACTGGG	1 cut(s)	1981
BmsI	GCATC	7 cut(s)	279, 613, 711, 736, 2062, 2414, 2580
BmuI	ACTGGG	1 cut(s)	1981
BpiI	GAAGAC	2 cut(s)	614, 2486
BplI	GAGNNNNNCTC	4 cut(s)	1093, 1125, 2507, 2539
BpmI	CTGGAG	3 cut(s)	755, 1216, 1899
Bpu10I	CCTNAGC	8 cut(s)	259, 578, 1317, 1394, 1617, 2093, 2170, 2192
Bpu1102I	GCTNAGC	1 cut(s)	531
Bpu14I	TTCGAA	2 cut(s)	719, 2871
BpuMI	CCSGG	3 cut(s)	234, 274, 2079
BsaAI	YACGTR	2 cut(s)	1068, 1251
BsaHI	GRCGYC	2 cut(s)	219, 636
BsaI	GGTCTC	2 cut(s)	12, 1540
BsaJI	CCNNGG	8 cut(s)	14, 36, 264, 415, 1126, 1520, 1795, 2649
BsaWI	WCCGGW	2 cut(s)	1902, 2271
BsaXI	ACNNNNNCTCC	8 cut(s)	229, 259, 2059, 2089, 2419, 2449, 2793, 2823
Bse118I	RCCGGY	4 cut(s)	82, 215, 461, 479
Bse1I	ACTGG	9 cut(s)	322, 1199, 1264, 1633, 1735, 1987, 2023, 2126, 2807
Bse3DI	GCAATG	1 cut(s)	1455
BseBI	CCWGG	3 cut(s)	628, 1405, 1950
BseDI	CCNNGG	8 cut(s)	14, 36, 264, 415, 1126, 1520, 1795, 2649
BseGI	GGATG	4 cut(s)	10, 1851, 2053, 2103
BseMI	GCAATG	1 cut(s)	1455
BseNI	ACTGG	9 cut(s)	322, 1199, 1264, 1633, 1735, 1987, 2023, 2126, 2807
BsePI	GCGCGC	1 cut(s)	555
BseRI	GAGGAG	3 cut(s)	292, 668, 1213
BseSI	GKGCMC	3 cut(s)	1821, 2030, 2257
BseXI	GCAGC	8 cut(s)	186, 381, 535, 992, 1312, 1447, 1475, 1704
BseYI	CCCAGC	5 cut(s)	1493, 2029, 2174, 2257, 2420
Bsh1236I	CGCG	6 cut(s)	430, 432, 557, 573, 684, 844
Bsh1285I	CGRYCG	1 cut(s)	278
BshFI	GGCC	9 cut(s)	35, 86, 420, 644, 672, 756, 2187, 2728, 2816
BshNI	GGYRCC	3 cut(s)	464, 1827, 2252
BsiEI	CGRYCG	1 cut(s)	278
BsiHKAI	GWGCWC	7 cut(s)	532, 605, 1166, 1362, 1821, 2806, 2889
BsiHKCI	CYCGRG	3 cut(s)	50, 106, 507
BslFI	GGGAC	1 cut(s)	799
BsmAI	GTCTC	5 cut(s)	12, 511, 754, 1325, 1540
BsmBI	CGTCTC	2 cut(s)	511, 754
BsmFI	GGGAC	1 cut(s)	799
BsmI	GAATGC	2 cut(s)	463, 1742
BsnI	GGCC	9 cut(s)	35, 86, 420, 644, 672, 756, 2187, 2728, 2816
Bso31I	GGTCTC	2 cut(s)	12, 1540
BsoBI	CYCGRG	3 cut(s)	50, 106, 507
Bsp119I	TTCGAA	2 cut(s)	719, 2871
Bsp143I	GATC	8 cut(s)	115, 826, 852, 1003, 1236, 1605, 2569, 2633
Bsp1720I	GCTNAGC	1 cut(s)	531
Bsp19I	CCATGG	2 cut(s)	415, 2649
BspANI	GGCC	9 cut(s)	35, 86, 420, 644, 672, 756, 2187, 2728, 2816
BspFNI	CGCG	6 cut(s)	430, 432, 557, 573, 684, 844
BspMAI	CTGCAG	1 cut(s)	1465
BspPI	GGATC	3 cut(s)	998, 1011, 2577
BspQI	GCTCTTC	3 cut(s)	1250, 2174, 2364
BspT104I	TTCGAA	2 cut(s)	719, 2871
BspT107I	GGYRCC	3 cut(s)	464, 1827, 2252
BspTI	CTTAAG	2 cut(s)	1832, 2135
BspTNI	GGTCTC	2 cut(s)	12, 1540
BsrBI	CCGCTC	1 cut(s)	2184
BsrDI	GCAATG	1 cut(s)	1455
BsrFI	RCCGGY	4 cut(s)	82, 215, 461, 479
BsrI	ACTGG	9 cut(s)	322, 1199, 1264, 1633, 1735, 1987, 2023, 2126, 2807
BssAI	RCCGGY	4 cut(s)	82, 215, 461, 479
BssECI	CCNNGG	8 cut(s)	14, 36, 264, 415, 1126, 1520, 1795, 2649
BssHII	GCGCGC	1 cut(s)	555
BssMI	GATC	8 cut(s)	115, 826, 852, 1003, 1236, 1605, 2569, 2633
BssNI	GRCGYC	2 cut(s)	219, 636
BssSI	CACGAG	3 cut(s)	20, 406, 1099
BssT1I	CCWWGG	4 cut(s)	415, 1126, 1520, 2649
Bst2BI	CACGAG	3 cut(s)	20, 406, 1099
Bst2UI	CCWGG	3 cut(s)	628, 1405, 1950
Bst4CI	ACNGT	4 cut(s)	193, 1921, 2010, 2771
Bst6I	CTCTTC	5 cut(s)	894, 990, 1250, 2174, 2364
BstACI	GRCGYC	2 cut(s)	219, 636
BstAFI	CTTAAG	2 cut(s)	1832, 2135
BstBAI	YACGTR	2 cut(s)	1068, 1251
BstBI	TTCGAA	2 cut(s)	719, 2871
BstDSI	CCRYGG	3 cut(s)	415, 1795, 2649
BstENI	CCTNNNNNAGG	1 cut(s)	1720
BstF5I	GGATG	4 cut(s)	10, 1851, 2053, 2103
BstFNI	CGCG	6 cut(s)	430, 432, 557, 573, 684, 844
BstH2I	RGCGCY	6 cut(s)	28, 72, 500, 515, 569, 1326
BstKTI	GATC	8 cut(s)	118, 829, 855, 1006, 1239, 1608, 2572, 2636
BstMAI	GTCTC	5 cut(s)	12, 511, 754, 1325, 1540
BstMBI	GATC	8 cut(s)	115, 826, 852, 1003, 1236, 1605, 2569, 2633
BstMCI	CGRYCG	1 cut(s)	278
BstNI	CCWGG	3 cut(s)	628, 1405, 1950
BstNSI	RCATGY	2 cut(s)	1650, 2017
BstSCI	CCNGG	6 cut(s)	232, 272, 626, 1403, 1948, 2077
BstSFI	CTRYAG	3 cut(s)	1055, 1078, 1461
BstSLI	GKGCMC	3 cut(s)	1821, 2030, 2257
BstUI	CGCG	6 cut(s)	430, 432, 557, 573, 684, 844
BstV1I	GCAGC	8 cut(s)	186, 381, 535, 992, 1312, 1447, 1475, 1704
BstV2I	GAAGAC	2 cut(s)	614, 2486
BstX2I	RGATCY	2 cut(s)	852, 1003
BstYI	RGATCY	2 cut(s)	852, 1003
BsuRI	GGCC	9 cut(s)	35, 86, 420, 644, 672, 756, 2187, 2728, 2816
BtgI	CCRYGG	3 cut(s)	415, 1795, 2649
BtrI	CACGTC	1 cut(s)	202
BtsCI	GGATG	4 cut(s)	10, 1851, 2053, 2103
BtsI	GCAGTG	1 cut(s)	1964
BtsIMutI	CAGTG	5 cut(s)	1088, 1728, 1964, 2030, 2767
CaiI	CAGNNNCTG	3 cut(s)	337, 594, 2384
Cfr10I	RCCGGY	4 cut(s)	82, 215, 461, 479
Cfr13I	GGNCC	8 cut(s)	33, 538, 549, 754, 813, 1887, 2243, 2653
CpoI	CGGWCCG	1 cut(s)	549
CseI	GACGC	3 cut(s)	166, 208, 2636
Csp6I	GTAC	6 cut(s)	1069, 1267, 1828, 2011, 2427, 2614
CspI	CGGWCCG	1 cut(s)	549
CviQI	GTAC	6 cut(s)	1069, 1267, 1828, 2011, 2427, 2614
DpnI	GATC	8 cut(s)	117, 828, 854, 1005, 1238, 1607, 2571, 2635
DpnII	GATC	8 cut(s)	115, 826, 852, 1003, 1236, 1605, 2569, 2633
DriI	GACNNNNNGTC	1 cut(s)	2692
EaeI	YGGCCR	4 cut(s)	84, 418, 670, 2814
Eam1104I	CTCTTC	5 cut(s)	894, 990, 1250, 2174, 2364
Eam1105I	GACNNNNNGTC	1 cut(s)	2692
EarI	CTCTTC	5 cut(s)	894, 990, 1250, 2174, 2364
EciI	GGCGGA	1 cut(s)	2096
Ecl136II	GAGCTC	1 cut(s)	530
Eco130I	CCWWGG	4 cut(s)	415, 1126, 1520, 2649
Eco147I	AGGCCT	1 cut(s)	2728
Eco24I	GRGCYC	2 cut(s)	532, 1245
Eco31I	GGTCTC	2 cut(s)	12, 1540
Eco47I	GGWCC	6 cut(s)	538, 549, 813, 1887, 2243, 2653
Eco53kI	GAGCTC	1 cut(s)	530
Eco57I	CTGAAG	3 cut(s)	833, 918, 1952
Eco72I	CACGTG	1 cut(s)	1251
Eco88I	CYCGRG	3 cut(s)	50, 106, 507
EcoICRI	GAGCTC	1 cut(s)	530
EcoNI	CCTNNNNNAGG	1 cut(s)	1720
EcoO109I	RGGNCCY	1 cut(s)	1887
EcoRI	GAATTC	2 cut(s)	122, 2873
EcoRII	CCWGG	3 cut(s)	626, 1403, 1948
EcoT14I	CCWWGG	4 cut(s)	415, 1126, 1520, 2649
EcoT22I	ATGCAT	3 cut(s)	704, 1652, 1744
EcoT38I	GRGCYC	2 cut(s)	532, 1245
ErhI	CCWWGG	4 cut(s)	415, 1126, 1520, 2649
Esp3I	CGTCTC	2 cut(s)	511, 754
FalI	AAGNNNNNCTT	1 cut(s)	2873
FaqI	GGGAC	1 cut(s)	799
FauI	CCCGC	1 cut(s)	566
FbaI	TGATCA	1 cut(s)	1605
FblI	GTMKAC	2 cut(s)	284, 1776
FokI	GGATG	3 cut(s)	1858, 2040, 2090
FriOI	GRGCYC	2 cut(s)	532, 1245
FspBI	CTAG	2 cut(s)	1409, 2607
GsaI	CCCAGC	5 cut(s)	1497, 2033, 2178, 2261, 2424
GsuI	CTGGAG	3 cut(s)	755, 1216, 1899
HaeII	RGCGCY	6 cut(s)	28, 72, 500, 515, 569, 1326
HaeIII	GGCC	9 cut(s)	35, 86, 420, 644, 672, 756, 2187, 2728, 2816
HgaI	GACGC	3 cut(s)	166, 208, 2636
Hin1I	GRCGYC	2 cut(s)	219, 636
HincII	GTYRAC	3 cut(s)	285, 778, 2686
HindII	GTYRAC	3 cut(s)	285, 778, 2686
HindIII	AAGCTT	4 cut(s)	832, 1281, 1703, 2228
HphI	GGTGA	5 cut(s)	222, 2093, 2129, 2518, 2638
Hpy166II	GTNNAC	9 cut(s)	285, 778, 871, 1777, 1819, 2006, 2101, 2614, 2686
Hpy8I	GTNNAC	9 cut(s)	285, 778, 871, 1777, 1819, 2006, 2101, 2614, 2686
Hpy99I	CGWCG	9 cut(s)	82, 182, 206, 224, 286, 289, 638, 641, 2630
HpyCH4III	ACNGT	4 cut(s)	193, 1921, 2010, 2771
HpyCH4IV	ACGT	6 cut(s)	77, 201, 485, 636, 1067, 1250
HpySE526I	ACGT	6 cut(s)	77, 201, 485, 636, 1067, 1250
Hsp92I	GRCGYC	2 cut(s)	219, 636
KpnI	GGTACC	1 cut(s)	1831
KroI	GCCGGC	2 cut(s)	82, 215
KroNI	GCCGGC	2 cut(s)	84, 217
Ksp22I	TGATCA	1 cut(s)	1605
Kzo9I	GATC	8 cut(s)	115, 826, 852, 1003, 1236, 1605, 2569, 2633
LguI	GCTCTTC	3 cut(s)	1250, 2174, 2364
Lsp1109I	GCAGC	8 cut(s)	186, 381, 535, 992, 1312, 1447, 1475, 1704
LweI	GCATC	7 cut(s)	279, 613, 711, 736, 2062, 2414, 2580
MaeI	CTAG	2 cut(s)	1409, 2607
MaeII	ACGT	6 cut(s)	77, 201, 485, 636, 1067, 1250
MaeIII	GTNAC	5 cut(s)	133, 1624, 2081, 2117, 2506
MalI	GATC	8 cut(s)	117, 828, 854, 1005, 1238, 1607, 2571, 2635
MbiI	CCGCTC	1 cut(s)	2184
MboI	GATC	8 cut(s)	115, 826, 852, 1003, 1236, 1605, 2569, 2633
MfeI	CAATTG	1 cut(s)	1037
MflI	RGATCY	2 cut(s)	852, 1003
MlsI	TGGCCA	2 cut(s)	420, 2816
MluCI	AATT	9 cut(s)	122, 819, 891, 1037, 1340, 1632, 1656, 2731, 2873
MluNI	TGGCCA	2 cut(s)	420, 2816
MlyI	GAGTC	5 cut(s)	35, 485, 627, 1212, 2375
MmeI	TCCRAC	3 cut(s)	202, 330, 981
Mox20I	TGGCCA	2 cut(s)	420, 2816
Mph1103I	ATGCAT	3 cut(s)	704, 1652, 1744
MreI	CGCCGGCG	1 cut(s)	215
MroNI	GCCGGC	2 cut(s)	82, 215
MroXI	GAANNNNTTC	3 cut(s)	368, 1047, 2744
MscI	TGGCCA	2 cut(s)	420, 2816
MseI	TTAA	7 cut(s)	384, 1701, 1719, 1833, 2136, 2234, 2893
MslI	CAYNNNNRTG	4 cut(s)	204, 707, 2648, 2772
Msp20I	TGGCCA	2 cut(s)	420, 2816
MspA1I	CMGCKG	2 cut(s)	535, 2033
MspCI	CTTAAG	2 cut(s)	1832, 2135
MspR9I	CCNGG	6 cut(s)	234, 274, 628, 1405, 1950, 2079
MunI	CAATTG	1 cut(s)	1037
Mva1269I	GAATGC	2 cut(s)	463, 1742
MvaI	CCWGG	3 cut(s)	628, 1405, 1950
MvnI	CGCG	6 cut(s)	430, 432, 557, 573, 684, 844
NaeI	GCCGGC	2 cut(s)	84, 217
NciI	CCSGG	3 cut(s)	234, 274, 2079
NcoI	CCATGG	2 cut(s)	415, 2649
NdeII	GATC	8 cut(s)	115, 826, 852, 1003, 1236, 1605, 2569, 2633
NgoMIV	GCCGGC	2 cut(s)	82, 215
NmeAIII	GCCGAG	3 cut(s)	415, 473, 1354
NmuCI	GTSAC	4 cut(s)	1624, 2081, 2117, 2506
NsiI	ATGCAT	3 cut(s)	704, 1652, 1744
NspI	RCATGY	2 cut(s)	1650, 2017
NspV	TTCGAA	2 cut(s)	719, 2871
PauI	GCGCGC	1 cut(s)	555
PceI	AGGCCT	1 cut(s)	2728
PciI	ACATGT	1 cut(s)	2013
PciSI	GCTCTTC	3 cut(s)	1250, 2174, 2364
PcsI	WCGNNNNNNNCGW	4 cut(s)	284, 429, 801, 2622
PctI	GAATGC	2 cut(s)	463, 1742
PdiI	GCCGGC	2 cut(s)	84, 217
PdmI	GAANNNNTTC	3 cut(s)	368, 1047, 2744
PfeI	GAWTC	7 cut(s)	98, 716, 839, 1896, 2307, 2432, 2440
PflMI	CCANNNNNTGG	1 cut(s)	1389
PfoI	TCCNGGA	1 cut(s)	1948
PleI	GAGTC	5 cut(s)	35, 485, 626, 1211, 2375
PmaCI	CACGTG	1 cut(s)	1251
PmlI	CACGTG	1 cut(s)	1251
PpsI	GAGTC	5 cut(s)	35, 485, 626, 1211, 2375
Ppu21I	YACGTR	2 cut(s)	1068, 1251
PpuMI	RGGWCCY	1 cut(s)	1887
PscI	ACATGT	1 cut(s)	2013
PsiI	TTATAA	1 cut(s)	1637
Psp124BI	GAGCTC	1 cut(s)	532
Psp5II	RGGWCCY	1 cut(s)	1887
Psp6I	CCWGG	3 cut(s)	626, 1403, 1948
PspCI	CACGTG	1 cut(s)	1251
PspFI	CCCAGC	5 cut(s)	1493, 2029, 2174, 2257, 2420
PspGI	CCWGG	3 cut(s)	626, 1403, 1948
PspPI	GGNCC	8 cut(s)	33, 538, 549, 754, 813, 1887, 2243, 2653
PspPPI	RGGWCCY	1 cut(s)	1887
PstI	CTGCAG	1 cut(s)	1465
PstNI	CAGNNNCTG	3 cut(s)	337, 594, 2384
PsuI	RGATCY	2 cut(s)	852, 1003
PteI	GCGCGC	1 cut(s)	555
PvuII	CAGCTG	2 cut(s)	535, 2033
RsaI	GTAC	6 cut(s)	1070, 1268, 1829, 2012, 2428, 2615
RsaNI	GTAC	6 cut(s)	1069, 1267, 1828, 2011, 2427, 2614
RseI	CAYNNNNRTG	4 cut(s)	204, 707, 2648, 2772
Rsr2I	CGGWCCG	1 cut(s)	549
RsrII	CGGWCCG	1 cut(s)	549
SacI	GAGCTC	1 cut(s)	532
SalI	GTCGAC	1 cut(s)	283
SapI	GCTCTTC	3 cut(s)	1250, 2174, 2364
SaqAI	TTAA	7 cut(s)	384, 1701, 1719, 1833, 2136, 2234, 2893
Sau3AI	GATC	8 cut(s)	115, 826, 852, 1003, 1236, 1605, 2569, 2633
Sau96I	GGNCC	8 cut(s)	33, 538, 549, 754, 813, 1887, 2243, 2653
SchI	GAGTC	5 cut(s)	35, 485, 627, 1212, 2375
ScrFI	CCNGG	6 cut(s)	234, 274, 628, 1405, 1950, 2079
SfaNI	GCATC	7 cut(s)	279, 613, 711, 736, 2062, 2414, 2580
SfcI	CTRYAG	3 cut(s)	1055, 1078, 1461
SfuI	TTCGAA	2 cut(s)	719, 2871
SgrAI	CRCCGGYG	1 cut(s)	215
SgrDI	CGTCGACG	1 cut(s)	283
SinI	GGWCC	6 cut(s)	538, 549, 813, 1887, 2243, 2653
SmiMI	CAYNNNNRTG	4 cut(s)	204, 707, 2648, 2772
SmlI	CTYRAG	2 cut(s)	1832, 2135
SmoI	CTYRAG	2 cut(s)	1832, 2135
Sse9I	AATT	9 cut(s)	122, 819, 891, 1037, 1340, 1632, 1656, 2731, 2873
SseBI	AGGCCT	1 cut(s)	2728
SspI	AATATT	1 cut(s)	2356
SspMI	CTAG	2 cut(s)	1409, 2607
SstI	GAGCTC	1 cut(s)	532
StuI	AGGCCT	1 cut(s)	2728
StyD4I	CCNGG	6 cut(s)	232, 272, 626, 1403, 1948, 2077
StyI	CCWWGG	4 cut(s)	415, 1126, 1520, 2649
TaaI	ACNGT	4 cut(s)	193, 1921, 2010, 2771
TaiI	ACGT	6 cut(s)	80, 204, 488, 639, 1070, 1253
TaqII	GACCGA	2 cut(s)	107, 537
TasI	AATT	9 cut(s)	122, 819, 891, 1037, 1340, 1632, 1656, 2731, 2873
TatI	WGTACW	3 cut(s)	1266, 2010, 2426
TauI	GCSGC	3 cut(s)	506, 847, 2187
TfiI	GAWTC	7 cut(s)	98, 716, 839, 1896, 2307, 2432, 2440
Tru1I	TTAA	7 cut(s)	384, 1701, 1719, 1833, 2136, 2234, 2893
Tru9I	TTAA	7 cut(s)	384, 1701, 1719, 1833, 2136, 2234, 2893
TscAI	CASTG	5 cut(s)	1095, 1735, 1971, 2030, 2774
TseFI	GTSAC	4 cut(s)	1624, 2081, 2117, 2506
TseI	GCWGC	8 cut(s)	174, 394, 523, 980, 1325, 1460, 1463, 1692
Tsp45I	GTSAC	4 cut(s)	1624, 2081, 2117, 2506
TspDTI	ATGAA	8 cut(s)	574, 785, 894, 1277, 2217, 2314, 2564, 2568
TspGWI	ACGGA	2 cut(s)	778, 2479
TspRI	CASTG	5 cut(s)	1095, 1735, 1971, 2030, 2774
Van91I	CCANNNNNTGG	1 cut(s)	1389
Vha464I	CTTAAG	2 cut(s)	1832, 2135
VneI	GTGCAC	1 cut(s)	1817
VpaK11BI	GGWCC	6 cut(s)	538, 549, 813, 1887, 2243, 2653
XagI	CCTNNNNNAGG	1 cut(s)	1720
XapI	RAATTY	4 cut(s)	122, 819, 1340, 2873
XceI	RCATGY	2 cut(s)	1650, 2017
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2675
XmiI	GTMKAC	2 cut(s)	284, 1776
XmnI	GAANNNNTTC	3 cut(s)	368, 1047, 2744
XspI	CTAG	2 cut(s)	1409, 2607
ZraI	GACGTC	1 cut(s)	637
Zsp2I	ATGCAT	3 cut(s)	704, 1652, 1744

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.