Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr6

Orthogroup ID

OG0009819

Physical Location & Seq

Genomic Coordinates Forward (+)

14132346 .. 14139616

Gene Structure 7271 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom06g08880.10

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2586 bp

ATGAGGGCTCTTCCGAGGCACGAGCGCCGATGGGCCTCGGACTCCGTCCCCATGAGATCGACGGTCAGCACCGGATCATCATCTCCGGCAATGACTGATGACTCCAACTCTGGGGATCAGGAGTTCGTCGAGGTAACTCTCGACTTACAAGATGACAACACGATTGTCCTCCGCAGCGTCGAGCCGGCCACCGTCATTCACATCGACGAACTCGCCACCGCCGGAAATGAAACTCCGACGTCGGCGTTGGCTTCGGCTTCTCAGTCGCCATCCACGATACGGCGAAGCTCGTCCAACAATCGGATACGGCAGTTCTCTCAGGAGCTCAAAGCCGAGGCCGTAGCGAAAGCGAAGCAATTTTCTCAAGAGCTCAAAGCCGAGCTGAGGAGGTTTTCGTGGAACCAAAGCCACGGCTCGAGAGTTCTCTCCGCTTCGACTTCTCAGAATGCATCAGTCGGTGGTGGCGGAGGCGGTGCATTTGACTCGGCTCTGGCAGCTCGAGCTCTCAGGCGGCAGCGAGCGCAGCTTGATCGCACTCACTCCAGCGCTCAGAAAGCGCTTCGGGGGTTAAGGTTCATTAGTAACTGCAAGAGTACGAAGACCAATGGCGTCGATGCTTGGAACGAAGTGGAGGTCAATTTCAACAAGCTCGCCAAGGACGGCCACCTCCATCGCGCCGATTTCGGTCAATGCATCGGAATGAAAGATTCCAAGGAGTTTGCGTTGGAGTTGTTCGATGCGTTGGGTCGTAGACGACGAATGAAGGTTGAGAAAATCAGCAAGGACGAGCTCTATGAGTTTTGGTCCCAAATTTCCGATCAAAGTTTCGATTCGAGACTTCAGATCTTCTTCGACATGGTGGACAAGAATGATGATGGTCGAATTACAGAAGAAGAAGTTAAAGAGATCATCATGTTGAGTGCTTCTGCAAACAAGCTATCAAGATTGAAGGAACAAGCAGAGGAATATGCAGCTCTGATCATGGAAGAGTTGGATCCTGAAAGGCTTGGCTACATCGAGCTGTGGCAATTGGAGACGCTTCTACTACAAAAAGACACGTACTTAAACTACAGCCAAGCACTGAGTTACACTAGCCAAGCCCTAAGCCAGAACCTCCAAGGGCTGAGAAGTAGGAGCCCAATACGCAGAATGAGCACCAAATTACTCTATTACTTGCAGGAAAACTGGAAGAGAATCTGGGTTTTGACATTGTGGGTTAGCATTATGATTGCGCTCTTCACATGGAAATTCATCCAGTACAAGAGGAAAAGTGCCTTTCAGATAATGCGTTATTGCGTTCTCACGGCCAAAGGTGCTGGCGAGACCTTGAAATTCAACATGGCTCTTGTGCTGCTGCCTGTTTGTAGAAACACCATCACTTGGCTCAGGTCCACCAGGCTTGGCTTCTTTGTGCCTTTTGACGACAACATCAACTTCCACAAGACAATTGCTGCAGCCATCGTAGTTGGTGTCATTCTCCATGCTGGGAACCATCTTGCTTGTGATTTTCCGAGGCTTATAAAGGTTCCCGAATCAGACTACGAGAAATATTTGCATCATGACTTTGGAAAGCATAAACCCACCTACCTAGATTTGGTTAAAGGGGCAGAGGGGGTGACTGGAATTATAATGGTGATATGCATGATTATTGCTTTCACACTCGCTACACGGTGGTTCAGGCGGAGCCTCATTAAGCTTCCCAAGCCCTTCAATAGGCTCACCGGCTTCAATGCCTTCTGGTATTCACATCACTTATTTGTTATTGTCTATATCTTGCTCATTATCCATGGCGTTTTCCTCTATCTCGTGCACACATGGTACCTAAAGACGACTTGGATGTATCTTTCTGTTCCTGTTTTACTATATGCTGGAGAAAGGATCTTGAGAATCTTTCGGTCCGGCTCATATACTGTCCGTCTTCTGAAGGTTGCTATTTATCCTGGAAACGTTCTCACATTGCAAATGTCTAAGCCACAACAATTTAAGTACAAGAGTGGTCAGTACATGTTTGTACAGTGCCCAGCAGTTTCTCCGTTTGAGTGGCATCCATTTTCGATTACATCTGCTCCAGGTGATGACTACCTTAGTGTTCACATTCGTCAGCTTGGTGACTGGACACAAGAACTTAAGAGGGTCTTCTCAGAAGCTTGCGAGCCTCCCTTAGCTGGGAAGAGTGGCCTTCTAAGGGCTGATGAAACAACCAGGACAAGTTTGCCCAAGCTTTTAATAGATGGGCCTTACGGTGCCCCAGCACAAGACTACCGGAAATATGATGTCCTGCTGCTTGTTGGTCTTGGAATCGGTGCAACGCCATTCATCAGTATTTTGAAAGATTTGCTCAACAATATTGTCAAGATGGAAGAGCAGGCAGATTCCATTTCAGATTTCAGTCGAACATCAGACCTAAGTTCTGGAAGTATAGGTTCTCCCAATCCCAACAAGGTTGATCGATCGAAACGGAAAAAGCCTCTGAAGACCACCAATGCCTACTTTTATTGGGTAACGAGGGAGCAAGGGTCGTTTGATTGGTTCAAAGGAGTGATGAATGAAGTTGCAGAGCTTGATCGATCAAAGGGGTGTCATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000160 GO:0001101 GO:0002252 GO:0002376 GO:0002679 GO:0003674 GO:0003824 GO:0005575 GO:0005623 GO:0005886 GO:0006950 GO:0006952 GO:0006970 GO:0007154 GO:0007165 GO:0007231 GO:0008150 GO:0008152 GO:0009058 GO:0009628 GO:0009719 GO:0009723 GO:0009725 GO:0009737 GO:0009738 GO:0009755 GO:0009873 GO:0009987 GO:0010033 GO:0010119 GO:0010941 GO:0016020 GO:0016174 GO:0016491 GO:0016651 GO:0016999 GO:0017000 GO:0017144 GO:0023052 GO:0032870 GO:0033036 GO:0033037 GO:0033500 GO:0033554 GO:0033993 GO:0035556 GO:0042221 GO:0042592 GO:0042743 GO:0043067 GO:0043069 GO:0044237 GO:0044249 GO:0044464 GO:0045730 GO:0048519 GO:0048523 GO:0048878 GO:0050664 GO:0050665 GO:0050789 GO:0050794 GO:0050896 GO:0051179 GO:0051186 GO:0051188 GO:0051716 GO:0052542 GO:0052545 GO:0055114 GO:0060548 GO:0065007 GO:0065008 GO:0070887 GO:0071214 GO:0071215 GO:0071229 GO:0071310 GO:0071369 GO:0071396 GO:0071470 GO:0071495 GO:0071944 GO:0072593 GO:0097305 GO:0097306 GO:0104004 GO:1901700 GO:1901701 GO:1903409

KEGG Pathways

Metabolic & Signaling

ko04016 ko04626 map04016 map04626

Pfam Domains

Protein Families

FAD_binding_8 Ferric_reduct NADPH_Ox NAD_binding_6

Protein Analysis

862

Amino Acids

97.87

Weight (kDa)

9.31

Isoelectric Point (pI)

51.8

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009819)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G64060
fragaria_vesca	FvH4_5g03310 FvH4_5g03310 FvH4_5g03310 FvH4_5g03310
malus_domestica	MD06G1093000.v1.1 MD14G1113700.v1.1
prunus_persica	Prupe.5G107400_v2.0.a1
pyrus_communis	pycom06g08880
rosa_chinensis	RchiOBHm_Chr7g0196471
rosa_laevigata	RLG00000004012
rosa_multiflora	Rmu_co8333625.1_g000001 Rmu_sc0000736.1_g000003
rosa_roxburghii	Rroxscaffold_3G00259290
rosa_rugosa	Rorug07G0033600 Rorug07G0033700
rosa_samantha	Rh7AG158000 Rh7BG159900 Rh7CG166400 Rh7DG159200
rosa_wichuraiana	Rw7G013810

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	1520, 1628
AatII	GACGTC	1 cut(s)	242
Acc65I	GGTACC	1 cut(s)	1818
AccB1I	GGYRCC	2 cut(s)	1818, 2243
AccB7I	CCANNNNNTGG	1 cut(s)	1380
AccI	GTMKAC	1 cut(s)	751
AccII	CGCG	1 cut(s)	675
AciI	CCGC	7 cut(s)	172, 219, 429, 465, 471, 511, 1681
AclI	AACGTT	1 cut(s)	1947
AclWI	GGATC	5 cut(s)	82, 123, 989, 1002, 1886
AcoI	YGGCCR	3 cut(s)	186, 661, 1305
AcsI	RAATTY	3 cut(s)	810, 1247, 1331
AcuI	CTGAAG	3 cut(s)	824, 1943, 2492
AcyI	GRCGYC	2 cut(s)	239, 609
AfaI	GTAC	7 cut(s)	595, 1061, 1259, 1820, 1988, 2003, 2013
AfeI	AGCGCT	2 cut(s)	547, 558
AflII	CTTAAG	1 cut(s)	2126
AflIII	ACRYGT	2 cut(s)	1056, 2004
AgsI	TTSAA	8 cut(s)	643, 949, 1330, 1336, 1711, 1729, 2329, 2533
AjnI	CCWGG	4 cut(s)	1394, 1939, 2068, 2201
AloI	GAACNNNNNNTCC	2 cut(s)	107, 139
Alw21I	GWGCWC	6 cut(s)	327, 372, 505, 792, 1157, 1812
Alw26I	GTCTC	3 cut(s)	829, 1028, 1316
Alw44I	GTGCAC	1 cut(s)	1808
AlwI	GGATC	5 cut(s)	82, 123, 989, 1002, 1886
Ama87I	CYCGRG	2 cut(s)	415, 498
Aor51HI	AGCGCT	2 cut(s)	547, 558
AoxI	GGCC	7 cut(s)	33, 186, 336, 661, 1305, 2176, 2234
ApaLI	GTGCAC	1 cut(s)	1808
ApoI	RAATTY	3 cut(s)	810, 1247, 1331
ArsI	GACNNNNNNTTYG	2 cut(s)	618, 650
Asp718I	GGTACC	1 cut(s)	1818
AspLEI	GCGC	6 cut(s)	27, 523, 548, 559, 677, 1234
AspS9I	GGNCC	5 cut(s)	33, 804, 1389, 1896, 2234
AsuHPI	GGTGA	5 cut(s)	1627, 1645, 1711, 2084, 2120
AvaI	CYCGRG	2 cut(s)	415, 498
AvaII	GGWCC	3 cut(s)	804, 1389, 1896
BaeGI	GKGCMC	3 cut(s)	1812, 2021, 2248
BaeI	ACNNNNGTAYC	2 cut(s)	296, 329
BamHI	GGATCC	1 cut(s)	994
BanI	GGYRCC	2 cut(s)	1818, 2243
BanII	GRGCYC	6 cut(s)	10, 327, 372, 505, 792, 1139
BauI	CACGAG	2 cut(s)	20, 1805
BbsI	GAAGAC	4 cut(s)	605, 1910, 2128, 2480
Bbv12I	GWGCWC	6 cut(s)	327, 372, 505, 792, 1157, 1812
BbvCI	CCTCAGC	1 cut(s)	383
BccI	CCATC	9 cut(s)	24, 277, 678, 869, 1382, 1466, 1500, 2225, 2350
BceAI	ACGGC	6 cut(s)	296, 323, 323, 427, 676, 1320
BcgI	CGANNNNNNTGC	4 cut(s)	465, 499, 512, 546
BciT130I	CCWGG	4 cut(s)	1396, 1941, 2070, 2203
BciVI	GTATCC	1 cut(s)	297
BclI	TGATCA	1 cut(s)	978
BcoDI	GTCTC	3 cut(s)	829, 1028, 1316
BfaI	CTAG	2 cut(s)	1092, 1589
BfmI	CTRYAG	2 cut(s)	1069, 1452
BfoI	RGCGCY	3 cut(s)	28, 549, 560
BfrI	CTTAAG	1 cut(s)	2126
BfuI	GTATCC	1 cut(s)	297
BglII	AGATCT	1 cut(s)	843
Bme1390I	CCNGG	4 cut(s)	1396, 1941, 2070, 2203
Bme18I	GGWCC	3 cut(s)	804, 1389, 1896
BmeT110I	CYCGRG	2 cut(s)	415, 498
BmgT120I	GGNCC	5 cut(s)	33, 804, 1389, 1896, 2234
BmiI	GGNNCC	9 cut(s)	401, 806, 996, 1136, 1490, 1527, 1685, 1820, 2245
BmrFI	CCNGG	4 cut(s)	1396, 1941, 2070, 2203
BmsI	GCATC	6 cut(s)	458, 604, 702, 727, 1564, 2053
BpiI	GAAGAC	4 cut(s)	605, 1910, 2128, 2480
BpmI	CTGGAG	3 cut(s)	526, 1890, 2052
Bpu10I	CCTNAGC	4 cut(s)	383, 1103, 1385, 2161
BpuEI	CTTGAG	2 cut(s)	348, 1903
Bsa29I	ATCGAT	2 cut(s)	2449, 2566
BsaAI	YACGTR	1 cut(s)	1059
BsaBI	GATNNNNATC	1 cut(s)	79
BsaHI	GRCGYC	2 cut(s)	239, 609
BsaI	GGTCTC	1 cut(s)	1316
BsaJI	CCNNGG	9 cut(s)	14, 36, 333, 409, 654, 711, 1117, 1511, 1786
BsaWI	WCCGGW	2 cut(s)	71, 2262
BsaXI	ACNNNNNCTCC	6 cut(s)	707, 737, 2050, 2080, 2501, 2531
Bse118I	RCCGGY	2 cut(s)	184, 1721
Bse1I	ACTGG	4 cut(s)	1190, 1255, 1624, 2117
Bse3DI	GCAATG	2 cut(s)	96, 1955
Bse8I	GATNNNNATC	1 cut(s)	79
BseBI	CCWGG	4 cut(s)	1396, 1941, 2070, 2203
BseCI	ATCGAT	2 cut(s)	2449, 2566
BseDI	CCNNGG	9 cut(s)	14, 36, 333, 409, 654, 711, 1117, 1511, 1786
BseGI	GGATG	4 cut(s)	269, 1251, 1842, 2044
BseJI	GATNNNNATC	1 cut(s)	79
BseMI	GCAATG	2 cut(s)	96, 1955
BseNI	ACTGG	4 cut(s)	1190, 1255, 1624, 2117
BseRI	GAGGAG	1 cut(s)	400
BseSI	GKGCMC	3 cut(s)	1812, 2021, 2248
BseYI	CCCAGC	4 cut(s)	1484, 2020, 2165, 2248
Bsh1236I	CGCG	1 cut(s)	675
Bsh1285I	CGRYCG	1 cut(s)	2453
BshFI	GGCC	7 cut(s)	35, 188, 338, 663, 1307, 2178, 2236
BshNI	GGYRCC	2 cut(s)	1818, 2243
BshVI	ATCGAT	2 cut(s)	2449, 2566
BsiEI	CGRYCG	1 cut(s)	2453
BsiHKAI	GWGCWC	6 cut(s)	327, 372, 505, 792, 1157, 1812
BsiHKCI	CYCGRG	2 cut(s)	415, 498
BsiSI	CCGG	7 cut(s)	72, 86, 185, 222, 1722, 1899, 2263
BslFI	GGGAC	2 cut(s)	32, 790
BsmAI	GTCTC	3 cut(s)	829, 1028, 1316
BsmBI	CGTCTC	1 cut(s)	1028
BsmFI	GGGAC	2 cut(s)	32, 790
BsmI	GAATGC	1 cut(s)	451
BsnI	GGCC	7 cut(s)	35, 188, 338, 663, 1307, 2178, 2236
Bso31I	GGTCTC	1 cut(s)	1316
BsoBI	CYCGRG	2 cut(s)	415, 498
Bsp1407I	TGTACA	1 cut(s)	2011
Bsp19I	CCATGG	1 cut(s)	1786
BspACI	CCGC	7 cut(s)	172, 219, 429, 465, 471, 511, 1681
BspANI	GGCC	7 cut(s)	35, 188, 338, 663, 1307, 2178, 2236
BspDI	ATCGAT	2 cut(s)	2449, 2566
BspFNI	CGCG	1 cut(s)	675
BspHI	TCATGA	1 cut(s)	1558
BspLI	GGNNCC	9 cut(s)	401, 806, 996, 1136, 1490, 1527, 1685, 1820, 2245
BspMAI	CTGCAG	1 cut(s)	1456
BspPI	GGATC	5 cut(s)	82, 123, 989, 1002, 1886
BspQI	GCTCTTC	3 cut(s)	15, 1241, 2355
BspT107I	GGYRCC	2 cut(s)	1818, 2243
BspTI	CTTAAG	1 cut(s)	2126
BspTNI	GGTCTC	1 cut(s)	1316
BsrDI	GCAATG	2 cut(s)	96, 1955
BsrFI	RCCGGY	2 cut(s)	184, 1721
BsrGI	TGTACA	1 cut(s)	2011
BsrI	ACTGG	4 cut(s)	1190, 1255, 1624, 2117
BssAI	RCCGGY	2 cut(s)	184, 1721
BssECI	CCNNGG	9 cut(s)	14, 36, 333, 409, 654, 711, 1117, 1511, 1786
BssNI	GRCGYC	2 cut(s)	239, 609
BssSI	CACGAG	2 cut(s)	20, 1805
BssT1I	CCWWGG	4 cut(s)	654, 711, 1117, 1786
Bst2BI	CACGAG	2 cut(s)	20, 1805
Bst2UI	CCWGG	4 cut(s)	1396, 1941, 2070, 2203
Bst4CI	ACNGT	6 cut(s)	64, 193, 1671, 1912, 2016, 2243
Bst6I	CTCTTC	6 cut(s)	15, 981, 1184, 1241, 2165, 2355
BstACI	GRCGYC	2 cut(s)	239, 609
BstAFI	CTTAAG	1 cut(s)	2126
BstAUI	TGTACA	1 cut(s)	2011
BstBAI	YACGTR	1 cut(s)	1059
BstC8I	GCNNGC	7 cut(s)	186, 519, 651, 1318, 2149, 2153, 2367
BstDSI	CCRYGG	2 cut(s)	409, 1786
BstENI	CCTNNNNNAGG	1 cut(s)	1711
BstF5I	GGATG	4 cut(s)	269, 1251, 1842, 2044
BstFNI	CGCG	1 cut(s)	675
BstH2I	RGCGCY	3 cut(s)	28, 549, 560
BstHHI	GCGC	6 cut(s)	27, 523, 548, 559, 677, 1234
BstMAI	GTCTC	3 cut(s)	829, 1028, 1316
BstMCI	CGRYCG	1 cut(s)	2453
BstMWI	GCNNNNNNNGC	9 cut(s)	494, 500, 520, 523, 554, 1143, 1152, 1313, 1702
BstNI	CCWGG	4 cut(s)	1396, 1941, 2070, 2203
BstNSI	RCATGY	1 cut(s)	2008
BstSCI	CCNGG	4 cut(s)	1394, 1939, 2068, 2201
BstSFI	CTRYAG	2 cut(s)	1069, 1452
BstSLI	GKGCMC	3 cut(s)	1812, 2021, 2248
BstUI	CGCG	1 cut(s)	675
BstV2I	GAAGAC	4 cut(s)	605, 1910, 2128, 2480
BstX2I	RGATCY	3 cut(s)	843, 994, 1878
BstYI	RGATCY	3 cut(s)	843, 994, 1878
Bsu15I	ATCGAT	2 cut(s)	2449, 2566
BsuI	GTATCC	1 cut(s)	297
BsuRI	GGCC	7 cut(s)	35, 188, 338, 663, 1307, 2178, 2236
BsuTUI	ATCGAT	2 cut(s)	2449, 2566
BtgI	CCRYGG	2 cut(s)	409, 1786
BtgZI	GCGATG	1 cut(s)	656
BtsCI	GGATG	4 cut(s)	269, 1251, 1842, 2044
BtsIMutI	CAGTG	2 cut(s)	1079, 2021
Cac8I	GCNNGC	7 cut(s)	186, 519, 651, 1318, 2149, 2153, 2367
CciI	TCATGA	1 cut(s)	1558
CfoI	GCGC	6 cut(s)	27, 523, 548, 559, 677, 1234
Cfr10I	RCCGGY	2 cut(s)	184, 1721
Cfr13I	GGNCC	5 cut(s)	33, 804, 1389, 1896, 2234
ClaI	ATCGAT	2 cut(s)	2449, 2566
CpoI	CGGWCCG	1 cut(s)	1896
CseI	GACGC	3 cut(s)	166, 598, 1045
Csp6I	GTAC	7 cut(s)	594, 1060, 1258, 1819, 1987, 2002, 2012
CspCI	CAANNNNNGTGG	2 cut(s)	1381, 1416
CspI	CGGWCCG	1 cut(s)	1896
CviQI	GTAC	7 cut(s)	594, 1060, 1258, 1819, 1987, 2002, 2012
EaeI	YGGCCR	3 cut(s)	186, 661, 1305
Eam1104I	CTCTTC	6 cut(s)	15, 981, 1184, 1241, 2165, 2355
EarI	CTCTTC	6 cut(s)	15, 981, 1184, 1241, 2165, 2355
EciI	GGCGGA	2 cut(s)	480, 1696
Ecl136II	GAGCTC	4 cut(s)	325, 370, 503, 790
Eco130I	CCWWGG	4 cut(s)	654, 711, 1117, 1786
Eco24I	GRGCYC	6 cut(s)	10, 327, 372, 505, 792, 1139
Eco31I	GGTCTC	1 cut(s)	1316
Eco47I	GGWCC	3 cut(s)	804, 1389, 1896
Eco47III	AGCGCT	2 cut(s)	547, 558
Eco53kI	GAGCTC	4 cut(s)	325, 370, 503, 790
Eco57I	CTGAAG	3 cut(s)	824, 1943, 2492
Eco88I	CYCGRG	2 cut(s)	415, 498
EcoICRI	GAGCTC	4 cut(s)	325, 370, 503, 790
EcoNI	CCTNNNNNAGG	1 cut(s)	1711
EcoRII	CCWGG	4 cut(s)	1394, 1939, 2068, 2201
EcoT14I	CCWWGG	4 cut(s)	654, 711, 1117, 1786
EcoT22I	ATGCAT	3 cut(s)	451, 695, 1643
EcoT38I	GRGCYC	6 cut(s)	10, 327, 372, 505, 792, 1139
ErhI	CCWWGG	4 cut(s)	654, 711, 1117, 1786
Esp3I	CGTCTC	1 cut(s)	1028
FalI	AAGNNNNNCTT	2 cut(s)	2120, 2152
FaqI	GGGAC	2 cut(s)	32, 790
FbaI	TGATCA	1 cut(s)	978
FblI	GTMKAC	1 cut(s)	751
FokI	GGATG	4 cut(s)	256, 1238, 1849, 2031
FriOI	GRGCYC	6 cut(s)	10, 327, 372, 505, 792, 1139
FspBI	CTAG	2 cut(s)	1092, 1589
GlaI	GCGC	6 cut(s)	26, 522, 547, 558, 676, 1233
GsaI	CCCAGC	4 cut(s)	1488, 2024, 2169, 2252
GsuI	CTGGAG	3 cut(s)	526, 1890, 2052
HaeII	RGCGCY	3 cut(s)	28, 549, 560
HaeIII	GGCC	7 cut(s)	35, 188, 338, 663, 1307, 2178, 2236
HapII	CCGG	7 cut(s)	72, 86, 185, 222, 1722, 1899, 2263
HgaI	GACGC	3 cut(s)	166, 598, 1045
HhaI	GCGC	6 cut(s)	27, 523, 548, 559, 677, 1234
Hin1I	GRCGYC	2 cut(s)	239, 609
Hin6I	GCGC	6 cut(s)	25, 521, 546, 557, 675, 1232
HinP1I	GCGC	6 cut(s)	25, 521, 546, 557, 675, 1232
HindIII	AAGCTT	3 cut(s)	1694, 2145, 2219
HpaII	CCGG	7 cut(s)	72, 86, 185, 222, 1722, 1899, 2263
HphI	GGTGA	5 cut(s)	1627, 1645, 1711, 2084, 2120
Hpy166II	GTNNAC	5 cut(s)	752, 862, 1392, 1810, 2092
Hpy8I	GTNNAC	5 cut(s)	752, 862, 1392, 1810, 2092
Hpy99I	CGWCG	8 cut(s)	64, 131, 182, 209, 241, 244, 614, 759
HpyAV	CCTTC	6 cut(s)	757, 943, 1717, 1744, 1918, 2189
HpyCH4III	ACNGT	6 cut(s)	64, 193, 1671, 1912, 2016, 2243
HpyCH4IV	ACGT	3 cut(s)	239, 1058, 1947
HpyF10VI	GCNNNNNNNGC	9 cut(s)	494, 500, 520, 523, 554, 1143, 1152, 1313, 1702
HpySE526I	ACGT	3 cut(s)	239, 1058, 1947
Hsp92I	GRCGYC	2 cut(s)	239, 609
HspAI	GCGC	6 cut(s)	25, 521, 546, 557, 675, 1232
KpnI	GGTACC	1 cut(s)	1822
KroI	GCCGGC	1 cut(s)	184
KroNI	GCCGGC	1 cut(s)	186
Ksp22I	TGATCA	1 cut(s)	978
LguI	GCTCTTC	3 cut(s)	15, 1241, 2355
LmnI	GCTCC	5 cut(s)	322, 1134, 1683, 2071, 2509
LweI	GCATC	6 cut(s)	458, 604, 702, 727, 1564, 2053
MaeI	CTAG	2 cut(s)	1092, 1589
MaeII	ACGT	3 cut(s)	239, 1058, 1947
MaeIII	GTNAC	6 cut(s)	133, 581, 1085, 1615, 2108, 2500
MfeI	CAATTG	2 cut(s)	1028, 1446
MflI	RGATCY	3 cut(s)	843, 994, 1878
MlyI	GAGTC	3 cut(s)	35, 95, 476
MmeI	TCCRAC	5 cut(s)	129, 260, 318, 705, 972
Mph1103I	ATGCAT	3 cut(s)	451, 695, 1643
MroNI	GCCGGC	1 cut(s)	184
MseI	TTAA	8 cut(s)	569, 900, 1064, 1599, 1692, 1983, 2127, 2225
MslI	CAYNNNNRTG	1 cut(s)	698
MspCI	CTTAAG	1 cut(s)	2126
MspI	CCGG	7 cut(s)	72, 86, 185, 222, 1722, 1899, 2263
MspR9I	CCNGG	4 cut(s)	1396, 1941, 2070, 2203
MunI	CAATTG	2 cut(s)	1028, 1446
Mva1269I	GAATGC	1 cut(s)	451
MvaI	CCWGG	4 cut(s)	1396, 1941, 2070, 2203
MvnI	CGCG	1 cut(s)	675
MwoI	GCNNNNNNNGC	9 cut(s)	494, 500, 520, 523, 554, 1143, 1152, 1313, 1702
NaeI	GCCGGC	1 cut(s)	186
NcoI	CCATGG	1 cut(s)	1786
NgoMIV	GCCGGC	1 cut(s)	184
NlaIV	GGNNCC	9 cut(s)	401, 806, 996, 1136, 1490, 1527, 1685, 1820, 2245
NmeAIII	GCCGAG	3 cut(s)	358, 403, 464
NmuCI	GTSAC	2 cut(s)	1615, 2108
NsiI	ATGCAT	3 cut(s)	451, 695, 1643
NspI	RCATGY	1 cut(s)	2008
PaeR7I	CTCGAG	2 cut(s)	415, 498
PagI	TCATGA	1 cut(s)	1558
PciI	ACATGT	1 cut(s)	2004
PciSI	GCTCTTC	3 cut(s)	15, 1241, 2355
PcsI	WCGNNNNNNNCGW	2 cut(s)	272, 754
PctI	GAATGC	1 cut(s)	451
PdiI	GCCGGC	1 cut(s)	186
PfeI	GAWTC	7 cut(s)	707, 830, 1194, 1532, 1887, 2298, 2372
PflFI	GACNNNGTC	1 cut(s)	44
PflMI	CCANNNNNTGG	1 cut(s)	1380
PfoI	TCCNGGA	1 cut(s)	1939
Ple19I	CGATCG	1 cut(s)	2453
PleI	GAGTC	3 cut(s)	35, 95, 476
PpsI	GAGTC	3 cut(s)	35, 95, 476
Ppu21I	YACGTR	1 cut(s)	1059
PscI	ACATGT	1 cut(s)	2004
PsiI	TTATAA	2 cut(s)	1520, 1628
Psp124BI	GAGCTC	4 cut(s)	327, 372, 505, 792
Psp1406I	AACGTT	1 cut(s)	1947
Psp6I	CCWGG	4 cut(s)	1394, 1939, 2068, 2201
PspFI	CCCAGC	4 cut(s)	1484, 2020, 2165, 2248
PspGI	CCWGG	4 cut(s)	1394, 1939, 2068, 2201
PspN4I	GGNNCC	9 cut(s)	401, 806, 996, 1136, 1490, 1527, 1685, 1820, 2245
PspPI	GGNCC	5 cut(s)	33, 804, 1389, 1896, 2234
PspXI	VCTCGAGB	1 cut(s)	498
PstI	CTGCAG	1 cut(s)	1456
PsuI	RGATCY	3 cut(s)	843, 994, 1878
PsyI	GACNNNGTC	1 cut(s)	44
PvuI	CGATCG	1 cut(s)	2453
RsaI	GTAC	7 cut(s)	595, 1061, 1259, 1820, 1988, 2003, 2013
RsaNI	GTAC	7 cut(s)	594, 1060, 1258, 1819, 1987, 2002, 2012
RseI	CAYNNNNRTG	1 cut(s)	698
Rsr2I	CGGWCCG	1 cut(s)	1896
RsrII	CGGWCCG	1 cut(s)	1896
SacI	GAGCTC	4 cut(s)	327, 372, 505, 792
SapI	GCTCTTC	3 cut(s)	15, 1241, 2355
SaqAI	TTAA	8 cut(s)	569, 900, 1064, 1599, 1692, 1983, 2127, 2225
Sau96I	GGNCC	5 cut(s)	33, 804, 1389, 1896, 2234
SchI	GAGTC	3 cut(s)	35, 95, 476
ScrFI	CCNGG	4 cut(s)	1396, 1941, 2070, 2203
SfaNI	GCATC	6 cut(s)	458, 604, 702, 727, 1564, 2053
SfcI	CTRYAG	2 cut(s)	1069, 1452
Sfr274I	CTCGAG	2 cut(s)	415, 498
SinI	GGWCC	3 cut(s)	804, 1389, 1896
SlaI	CTCGAG	2 cut(s)	415, 498
SmiMI	CAYNNNNRTG	1 cut(s)	698
SmlI	CTYRAG	5 cut(s)	363, 415, 498, 1882, 2126
SmoI	CTYRAG	5 cut(s)	363, 415, 498, 1882, 2126
SsiI	CCGC	7 cut(s)	172, 219, 429, 465, 471, 511, 1681
SspI	AATATT	2 cut(s)	1550, 2347
SspMI	CTAG	2 cut(s)	1092, 1589
SstI	GAGCTC	4 cut(s)	327, 372, 505, 792
StyD4I	CCNGG	4 cut(s)	1394, 1939, 2068, 2201
StyI	CCWWGG	4 cut(s)	654, 711, 1117, 1786
TaaI	ACNGT	6 cut(s)	64, 193, 1671, 1912, 2016, 2243
TaiI	ACGT	3 cut(s)	242, 1061, 1950
TaqII	GACCGA	2 cut(s)	674, 1884
TatI	WGTACW	4 cut(s)	1257, 1986, 2001, 2011
TauI	GCSGC	1 cut(s)	514
TfiI	GAWTC	7 cut(s)	707, 830, 1194, 1532, 1887, 2298, 2372
Tru1I	TTAA	8 cut(s)	569, 900, 1064, 1599, 1692, 1983, 2127, 2225
Tru9I	TTAA	8 cut(s)	569, 900, 1064, 1599, 1692, 1983, 2127, 2225
TscAI	CASTG	2 cut(s)	1086, 2021
TseFI	GTSAC	2 cut(s)	1615, 2108
Tsp45I	GTSAC	2 cut(s)	1615, 2108
TspDTI	ATGAA	9 cut(s)	243, 565, 716, 776, 1240, 2208, 2305, 2558, 2562
TspGWI	ACGGA	4 cut(s)	34, 1904, 2022, 2473
TspRI	CASTG	2 cut(s)	1086, 2021
Tth111I	GACNNNGTC	1 cut(s)	44
Van91I	CCANNNNNTGG	1 cut(s)	1380
Vha464I	CTTAAG	1 cut(s)	2126
VneI	GTGCAC	1 cut(s)	1808
VpaK11BI	GGWCC	3 cut(s)	804, 1389, 1896
XagI	CCTNNNNNAGG	1 cut(s)	1711
XapI	RAATTY	3 cut(s)	810, 1247, 1331
XceI	RCATGY	1 cut(s)	2008
XhoI	CTCGAG	2 cut(s)	415, 498
XmiI	GTMKAC	1 cut(s)	751
XspI	CTAG	2 cut(s)	1092, 1589
ZraI	GACGTC	1 cut(s)	240
Zsp2I	ATGCAT	3 cut(s)	451, 695, 1643

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.