Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb5

Orthogroup ID

OG0014884

Physical Location & Seq

Genomic Coordinates Reverse (-)

2109758 .. 2114531

Gene Structure 4774 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_5g03610.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1560 bp

ATGGGCGGCAACTGCAGCTCCGCCGCAGCCGACTCCCCCGATCCCCGCCCCCACCTCCCATCCAACGGCCACGTCCAAGTCCTCCCCCCAAATGCCGCCCCGAACCGACCTCCACCGCCCAAACCCGCCCCGACCTCCACCGCAACCGCCTCCCCCGTCGGCCGCGTCCTCGGCAAACCCATGGAGGACGTCCGGGCCACCTACACCTTCGGCCGCGAGCTCGGCCGAGGCCAATTCGGCGTCACCTACCTCGTGACTCACAAAGAGTCCAAGCTCCAATTCGCCTGCAAATCCATCGCCACGCGCAAGCTCGTCAACCACGACGACGTCGAGGACGTCCGCCGTGAGGTCCAGATCATGCACCACCTCACCGGCCACCGCAACATCGTCGAGCTCAAAGGCGCGTACGAGGACCGCCACTCGGTCAACCTCGTCATGGAGCTCTGCGGCGGCGGCGAGCTCTTCGACAGGATCATCGCCAAGGGGCACTACTCGGAGCGCGCGGCGGCGAATCTCTGCCGGCAGATGGTCACGGTTGTGCATTACTGTCACTCCATGGGAGTGTTCCACAGGGACTTGAAGCCGGAGAATTTCTTGCTGTTGAGTAAAGATGAGGACTCGCCGCTCAAGGCCACCGATTTCGGACTCTCGGTGTTCTTCAAGCCCGGTGATGTATTCAAGGATCTTGTGGGAAGTGCATACTATGTTGCTCCTGAAGTGCTGCGCAGGCGTTATGGAGCTGAGGCTGATATTTGGAGTGCAGGGGTGATACTATACATTCTACTTAGTGGGGTTCCACCATTCTGGGGAGAGAATGAACAGGGTATCTTTGATGCTATTCTTCGGGGACACATTGATTTCTCATCTGATCCTTGGCCTTCCATATCCAGCAGTGCCAAAGATCTTGTGAAGAAAATGCTTCGAGCTGATCCAAAGGAACGGCTTGCAGCAGGGGATGTCCTAAATCATCCATGGATGCGAGAAGATGGCGACGCATCTGATAAACCTCTTGATATTGCTGTTTTATCTAGAATGAAACAGTTCAGGGCAATGAACAAACTCAAAAAAGTTGCATTGAAGGTAATTGCAGAAAATCTTTCTGAAGATGAAATCATAGGCTTGAAGGAAATGTTTAAATCAATGGACACAGATAATAGTGGAACAATTACATTTGAAGAGTTAAAAGCAGGCCTTCCAAAGCTGGGTACCAAGCTTTCTGAGTCTGAAGTGAGACAGTTGATGGAAGCGGCTGATGTGGATGGAAATGGAACCATTGATTATATTGAGTTTATAACTGCTACTATGCACATGAACAGAATGGATAGAGAGGACCATTTATATACAGCCTTTGAATATTTCGACAAGGACAAGAGCGGGTACATCACAATGGAAGAATTGGAGCAAGCACTTAAGAAGTATAATATGGGTGACGAACAAACGATTAAGGAAATCATCACAGAAGTTGACACAGATCTTGATGGAAGGATCAACTATGATGAGTTTGTTGCCATGATGAGGAAAGGAAATCCTGAGTTGGTCACAAACAGAAGAAGAAAATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004683 GO:0005488 GO:0005515 GO:0005516 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005773 GO:0005829 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006970 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0009628 GO:0009651 GO:0009719 GO:0009725 GO:0009737 GO:0009738 GO:0009755 GO:0009931 GO:0009987 GO:0010033 GO:0010119 GO:0010359 GO:0010857 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0018105 GO:0018193 GO:0018209 GO:0019538 GO:0022898 GO:0023052 GO:0032409 GO:0032412 GO:0032870 GO:0032879 GO:0033993 GO:0034762 GO:0034765 GO:0035556 GO:0036211 GO:0042221 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043269 GO:0043412 GO:0044070 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0046777 GO:0050789 GO:0050794 GO:0050896 GO:0051049 GO:0051716 GO:0065007 GO:0065009 GO:0070887 GO:0071215 GO:0071229 GO:0071310 GO:0071396 GO:0071495 GO:0071704 GO:0071944 GO:0097305 GO:0097306 GO:0140096 GO:1901564 GO:1901700 GO:1901701 GO:1903959

KEGG Pathways

Metabolic & Signaling

ko04626 ko05145 map04626 map05145

Pfam Domains

Protein Families

EF-hand_1 EF-hand_5 EF-hand_6 Pkinase

Protein Analysis

520

Amino Acids

58.16

Weight (kDa)

5.86

Isoelectric Point (pI)

38.87

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	68 - 326	2.3e-76	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	69 - 317	2e-28	Protein tyrosine and serine/threonine kinase
EF-hand_1	PF00036	374 - 400	7.5e-08	EF hand domain
EF-hand_7	PF13499	374 - 434	3.1e-13	EF-hand domain pair
EF-hand_6	PF13405	374 - 402	1.9e-06	EF-hand domain
EF-hand_8	PF13833	389 - 432	2.3e-06	EF-hand domain pair
EF-hand_7	PF13499	443 - 506	2.7e-16	EF-hand domain pair
EF-hand_6	PF13405	446 - 473	6.3e-07	EF-hand domain
EF-hand_1	PF00036	448 - 472	2.5e-06	EF hand domain
EF-hand_8	PF13833	458 - 507	1.3e-08	EF-hand domain pair
EF-hand_1	PF00036	481 - 507	6.7e-07	EF hand domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0014884)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G23650
fragaria_vesca	FvH4_5g03610 FvH4_5g03610 FvH4_5g03610
malus_domestica	MD06G1095900.v1.1 MD14G1116100.v1.1
prunus_persica	Prupe.5G110500_v2.0.a1
rosa_chinensis	RchiOBHm_Chr7g0196111
rosa_laevigata	RLG00000004064
rosa_multiflora	Rmu_sc0013391.1_g000002
rosa_roxburghii	Rroxscaffold_3G00259800
rosa_rugosa	Rorug07G0030700
rosa_samantha	Rh7AG156500 Rh7BG158100 Rh7CG162000
rosa_wichuraiana	Rw7G013370

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1292
AatII	GACGTC	3 cut(s)	192, 330, 339
Acc16I	TGCGCA	1 cut(s)	725
Acc65I	GGTACC	1 cut(s)	1205
AccB1I	GGYRCC	1 cut(s)	1205
AccBSI	CCGCTC	2 cut(s)	625, 1374
AccII	CGCG	6 cut(s)	165, 216, 304, 404, 501, 503
AclWI	GGATC	6 cut(s)	35, 479, 690, 863, 923, 1493
AcoI	YGGCCR	5 cut(s)	67, 160, 211, 223, 373
AcsI	RAATTY	1 cut(s)	589
AcuI	CTGAAG	3 cut(s)	735, 1122, 1245
AcyI	GRCGYC	4 cut(s)	189, 240, 327, 336
AfaI	GTAC	3 cut(s)	407, 1207, 1379
AfiI	CCNNNNNNNGG	8 cut(s)	65, 346, 421, 436, 526, 806, 1202, 1515
AflII	CTTAAG	1 cut(s)	1409
AgsI	TTSAA	7 cut(s)	580, 661, 679, 1078, 1123, 1175, 1352
AjiI	CACGTC	1 cut(s)	73
AjuI	GAANNNNNNNTTGG	2 cut(s)	263, 295
AleI	CACNNNNGTG	1 cut(s)	536
Alw21I	GWGCWC	4 cut(s)	222, 396, 444, 462
Alw26I	GTCTC	1 cut(s)	1225
AlwI	GGATC	6 cut(s)	35, 479, 690, 863, 923, 1493
ApeKI	GCWGC	4 cut(s)	15, 26, 721, 947
ApoI	RAATTY	1 cut(s)	589
Asp700I	GAANNNNTTC	1 cut(s)	1040
Asp718I	GGTACC	1 cut(s)	1205
AspLEI	GCGC	5 cut(s)	306, 404, 501, 503, 726
AspS9I	GGNCC	4 cut(s)	195, 349, 412, 1330
AsuC2I	CCSGG	2 cut(s)	194, 666
AsuHPI	GGTGA	5 cut(s)	235, 361, 680, 778, 1439
AvaII	GGWCC	3 cut(s)	349, 412, 1330
BaeGI	GKGCMC	1 cut(s)	489
BanI	GGYRCC	1 cut(s)	1205
BanII	GRGCYC	4 cut(s)	222, 396, 444, 462
BauI	CACGAG	1 cut(s)	251
Bbv12I	GWGCWC	4 cut(s)	222, 396, 444, 462
BbvCI	CCTCAGC	1 cut(s)	741
BbvI	GCAGC	4 cut(s)	27, 38, 708, 959
BccI	CCATC	7 cut(s)	67, 302, 520, 980, 1234, 1253, 1472
BceAI	ACGGC	3 cut(s)	82, 327, 956
BcgI	CGANNNNNNTGC	4 cut(s)	277, 311, 370, 404
BcnI	CCSGG	2 cut(s)	194, 666
BcoDI	GTCTC	1 cut(s)	1225
BfaI	CTAG	1 cut(s)	1029
BfmI	CTRYAG	1 cut(s)	13
BfrI	CTTAAG	1 cut(s)	1409
BglI	GCCNNNNNGGC	1 cut(s)	237
BglII	AGATCT	2 cut(s)	901, 1471
Bme1390I	CCNGG	2 cut(s)	194, 666
Bme18I	GGWCC	3 cut(s)	349, 412, 1330
BmgBI	CACGTC	1 cut(s)	73
BmgT120I	GGNCC	4 cut(s)	195, 349, 412, 1330
BmiI	GGNNCC	3 cut(s)	795, 1207, 1270
BmrFI	CCNGG	2 cut(s)	194, 666
BmsI	GCATC	3 cut(s)	823, 966, 1004
Bpu10I	CCTNAGC	1 cut(s)	741
BpuEI	CTTGAG	1 cut(s)	611
BpuMI	CCSGG	2 cut(s)	194, 666
BsaHI	GRCGYC	4 cut(s)	189, 240, 327, 336
BsaJI	CCNNGG	7 cut(s)	169, 180, 226, 480, 555, 872, 971
BsaXI	ACNNNNNCTCC	3 cut(s)	32, 536, 566
Bsc4I	CCNNNNNNNGG	8 cut(s)	65, 346, 421, 436, 526, 806, 1202, 1515
Bse118I	RCCGGY	2 cut(s)	371, 519
Bse3DI	GCAATG	1 cut(s)	1056
BseDI	CCNNGG	7 cut(s)	169, 180, 226, 480, 555, 872, 971
BseGI	GGATG	5 cut(s)	59, 961, 967, 981, 1264
BseLI	CCNNNNNNNGG	8 cut(s)	65, 346, 421, 436, 526, 806, 1202, 1515
BseMI	GCAATG	1 cut(s)	1056
BseMII	CTCAG	3 cut(s)	732, 1209, 1521
BsePI	GCGCGC	1 cut(s)	499
BseSI	GKGCMC	1 cut(s)	489
BseX3I	CGGCCG	3 cut(s)	160, 211, 223
BseXI	GCAGC	4 cut(s)	27, 38, 708, 959
BseYI	CCCAGC	1 cut(s)	1201
BsgI	GTGCAG	1 cut(s)	780
Bsh1236I	CGCG	6 cut(s)	165, 216, 304, 404, 501, 503
Bsh1285I	CGRYCG	3 cut(s)	163, 214, 226
BshNI	GGYRCC	1 cut(s)	1205
BsiEI	CGRYCG	3 cut(s)	163, 214, 226
BsiHKAI	GWGCWC	4 cut(s)	222, 396, 444, 462
BsiSI	CCGG	5 cut(s)	193, 372, 520, 584, 666
BsiWI	CGTACG	1 cut(s)	405
BslFI	GGGAC	2 cut(s)	587, 861
BslI	CCNNNNNNNGG	8 cut(s)	65, 346, 421, 436, 526, 806, 1202, 1515
BsmAI	GTCTC	1 cut(s)	1225
BsmFI	GGGAC	2 cut(s)	587, 861
Bsp1286I	GDGCHC	5 cut(s)	222, 396, 444, 462, 489
Bsp143I	GATC	9 cut(s)	40, 354, 471, 682, 868, 901, 928, 1471, 1485
Bsp19I	CCATGG	3 cut(s)	180, 555, 971
BspCNI	CTCAG	3 cut(s)	733, 1210, 1522
BspFNI	CGCG	6 cut(s)	165, 216, 304, 404, 501, 503
BspLI	GGNNCC	3 cut(s)	795, 1207, 1270
BspMAI	CTGCAG	1 cut(s)	17
BspPI	GGATC	6 cut(s)	35, 479, 690, 863, 923, 1493
BspQI	GCTCTTC	1 cut(s)	467
BspT107I	GGYRCC	1 cut(s)	1205
BspTI	CTTAAG	1 cut(s)	1409
BsrBI	CCGCTC	2 cut(s)	625, 1374
BsrDI	GCAATG	1 cut(s)	1056
BsrFI	RCCGGY	2 cut(s)	371, 519
BssAI	RCCGGY	2 cut(s)	371, 519
BssECI	CCNNGG	7 cut(s)	169, 180, 226, 480, 555, 872, 971
BssHII	GCGCGC	1 cut(s)	499
BssMI	GATC	9 cut(s)	40, 354, 471, 682, 868, 901, 928, 1471, 1485
BssNI	GRCGYC	4 cut(s)	189, 240, 327, 336
BssSI	CACGAG	1 cut(s)	251
BssT1I	CCWWGG	5 cut(s)	180, 480, 555, 872, 971
Bst2BI	CACGAG	1 cut(s)	251
Bst4CI	ACNGT	4 cut(s)	535, 548, 1041, 1236
Bst6I	CTCTTC	2 cut(s)	467, 1170
BstACI	GRCGYC	4 cut(s)	189, 240, 327, 336
BstAFI	CTTAAG	1 cut(s)	1409
BstDEI	CTNAG	4 cut(s)	741, 785, 1218, 1530
BstDSI	CCRYGG	3 cut(s)	180, 555, 971
BstF5I	GGATG	5 cut(s)	59, 961, 967, 981, 1264
BstFNI	CGCG	6 cut(s)	165, 216, 304, 404, 501, 503
BstHHI	GCGC	5 cut(s)	306, 404, 501, 503, 726
BstKTI	GATC	9 cut(s)	43, 357, 474, 685, 871, 904, 931, 1474, 1488
BstMAI	GTCTC	1 cut(s)	1225
BstMBI	GATC	9 cut(s)	40, 354, 471, 682, 868, 901, 928, 1471, 1485
BstMCI	CGRYCG	3 cut(s)	163, 214, 226
BstMWI	GCNNNNNNNGC	7 cut(s)	12, 15, 171, 222, 237, 453, 727
BstSCI	CCNGG	2 cut(s)	192, 664
BstSFI	CTRYAG	1 cut(s)	13
BstSLI	GKGCMC	1 cut(s)	489
BstUI	CGCG	6 cut(s)	165, 216, 304, 404, 501, 503
BstV1I	GCAGC	4 cut(s)	27, 38, 708, 959
BstX2I	RGATCY	3 cut(s)	682, 901, 1471
BstXI	CCANNNNNNTGG	1 cut(s)	804
BstYI	RGATCY	3 cut(s)	682, 901, 1471
BstZI	CGGCCG	3 cut(s)	160, 211, 223
BtgI	CCRYGG	3 cut(s)	180, 555, 971
BtgZI	GCGATG	2 cut(s)	280, 460
BtrI	CACGTC	1 cut(s)	73
BtsCI	GGATG	5 cut(s)	59, 961, 967, 981, 1264
BtsI	GCAGTG	1 cut(s)	898
BtsIMutI	CAGTG	1 cut(s)	898
CfoI	GCGC	5 cut(s)	306, 404, 501, 503, 726
Cfr10I	RCCGGY	2 cut(s)	371, 519
Cfr13I	GGNCC	4 cut(s)	195, 349, 412, 1330
CseI	GACGC	3 cut(s)	154, 229, 1001
Csp6I	GTAC	3 cut(s)	406, 1206, 1378
CviAII	CATG	7 cut(s)	181, 358, 436, 556, 972, 1309, 1510
CviQI	GTAC	3 cut(s)	406, 1206, 1378
DdeI	CTNAG	4 cut(s)	741, 785, 1218, 1530
DpnI	GATC	9 cut(s)	42, 356, 473, 684, 870, 903, 930, 1473, 1487
DpnII	GATC	9 cut(s)	40, 354, 471, 682, 868, 901, 928, 1471, 1485
DraI	TTTAAA	1 cut(s)	1135
EaeI	YGGCCR	5 cut(s)	67, 160, 211, 223, 373
EagI	CGGCCG	3 cut(s)	160, 211, 223
Eam1104I	CTCTTC	2 cut(s)	467, 1170
EarI	CTCTTC	2 cut(s)	467, 1170
EciI	GGCGGA	2 cut(s)	10, 329
Ecl136II	GAGCTC	4 cut(s)	220, 394, 442, 460
EclXI	CGGCCG	3 cut(s)	160, 211, 223
Eco130I	CCWWGG	5 cut(s)	180, 480, 555, 872, 971
Eco147I	AGGCCT	1 cut(s)	1191
Eco24I	GRGCYC	4 cut(s)	222, 396, 444, 462
Eco47I	GGWCC	3 cut(s)	349, 412, 1330
Eco52I	CGGCCG	3 cut(s)	160, 211, 223
Eco53kI	GAGCTC	4 cut(s)	220, 394, 442, 460
Eco57I	CTGAAG	3 cut(s)	735, 1122, 1245
EcoICRI	GAGCTC	4 cut(s)	220, 394, 442, 460
EcoT14I	CCWWGG	5 cut(s)	180, 480, 555, 872, 971
EcoT38I	GRGCYC	4 cut(s)	222, 396, 444, 462
ErhI	CCWWGG	5 cut(s)	180, 480, 555, 872, 971
FaeI	CATG	7 cut(s)	184, 361, 439, 559, 975, 1312, 1513
FalI	AAGNNNNNCTT	2 cut(s)	1176, 1208
FaqI	GGGAC	2 cut(s)	587, 861
FatI	CATG	7 cut(s)	180, 357, 435, 555, 971, 1308, 1509
FauI	CCCGC	3 cut(s)	53, 133, 1367
FokI	GGATG	5 cut(s)	46, 954, 968, 988, 1271
FriOI	GRGCYC	4 cut(s)	222, 396, 444, 462
FspBI	CTAG	1 cut(s)	1029
FspI	TGCGCA	1 cut(s)	725
GlaI	GCGC	5 cut(s)	305, 403, 500, 502, 725
GsaI	CCCAGC	1 cut(s)	1205
HapII	CCGG	5 cut(s)	193, 372, 520, 584, 666
HgaI	GACGC	3 cut(s)	154, 229, 1001
HhaI	GCGC	5 cut(s)	306, 404, 501, 503, 726
Hin1I	GRCGYC	4 cut(s)	189, 240, 327, 336
Hin1II	CATG	7 cut(s)	184, 361, 439, 559, 975, 1312, 1513
Hin6I	GCGC	5 cut(s)	304, 402, 499, 501, 724
HinP1I	GCGC	5 cut(s)	304, 402, 499, 501, 724
HincII	GTYRAC	3 cut(s)	316, 427, 1465
HindII	GTYRAC	3 cut(s)	316, 427, 1465
HindIII	AAGCTT	1 cut(s)	1211
HinfI	GANTC	7 cut(s)	32, 256, 266, 511, 617, 645, 1220
HpaII	CCGG	5 cut(s)	193, 372, 520, 584, 666
HphI	GGTGA	5 cut(s)	235, 361, 680, 778, 1439
Hpy166II	GTNNAC	3 cut(s)	316, 427, 1465
Hpy188I	TCNGA	7 cut(s)	496, 644, 868, 1000, 1102, 1219, 1225
Hpy188III	TCNNGA	7 cut(s)	253, 352, 713, 1010, 1029, 1475, 1529
Hpy8I	GTNNAC	3 cut(s)	316, 427, 1465
Hpy99I	CGWCG	6 cut(s)	161, 326, 329, 332, 392, 995
HpyAV	CCTTC	6 cut(s)	217, 888, 1072, 1117, 1202, 1476
HpyCH4III	ACNGT	4 cut(s)	535, 548, 1041, 1236
HpyCH4IV	ACGT	4 cut(s)	72, 189, 327, 336
HpyF10VI	GCNNNNNNNGC	7 cut(s)	12, 15, 171, 222, 237, 453, 727
HpyF3I	CTNAG	4 cut(s)	741, 785, 1218, 1530
HpySE526I	ACGT	4 cut(s)	72, 189, 327, 336
Hsp92I	GRCGYC	4 cut(s)	189, 240, 327, 336
Hsp92II	CATG	7 cut(s)	184, 361, 439, 559, 975, 1312, 1513
HspAI	GCGC	5 cut(s)	304, 402, 499, 501, 724
KpnI	GGTACC	1 cut(s)	1209
KroI	GCCGGC	1 cut(s)	519
KroNI	GCCGGC	1 cut(s)	521
Kzo9I	GATC	9 cut(s)	40, 354, 471, 682, 868, 901, 928, 1471, 1485
LguI	GCTCTTC	1 cut(s)	467
LmnI	GCTCC	7 cut(s)	23, 279, 439, 496, 715, 737, 1399
Lsp1109I	GCAGC	4 cut(s)	27, 38, 708, 959
LweI	GCATC	3 cut(s)	823, 966, 1004
MaeI	CTAG	1 cut(s)	1029
MaeII	ACGT	4 cut(s)	72, 189, 327, 336
MaeIII	GTNAC	6 cut(s)	241, 253, 529, 548, 1427, 1537
MalI	GATC	9 cut(s)	42, 356, 473, 684, 870, 903, 930, 1473, 1487
MbiI	CCGCTC	2 cut(s)	625, 1374
MboI	GATC	9 cut(s)	40, 354, 471, 682, 868, 901, 928, 1471, 1485
MboII	GAAGA	9 cut(s)	454, 649, 833, 922, 995, 1115, 1187, 1403, 1560
MflI	RGATCY	3 cut(s)	682, 901, 1471
MhlI	GDGCHC	5 cut(s)	222, 396, 444, 462, 489
MluCI	AATT	6 cut(s)	233, 278, 589, 1083, 1164, 1394
MlyI	GAGTC	6 cut(s)	26, 250, 275, 611, 639, 1229
MmeI	TCCRAC	1 cut(s)	87
MroNI	GCCGGC	1 cut(s)	519
MroXI	GAANNNNTTC	1 cut(s)	1040
MseI	TTAA	4 cut(s)	1134, 1181, 1410, 1443
MslI	CAYNNNNRTG	3 cut(s)	536, 560, 1385
MspCI	CTTAAG	1 cut(s)	1409
MspI	CCGG	5 cut(s)	193, 372, 520, 584, 666
MspR9I	CCNGG	2 cut(s)	194, 666
MvnI	CGCG	6 cut(s)	165, 216, 304, 404, 501, 503
MwoI	GCNNNNNNNGC	7 cut(s)	12, 15, 171, 222, 237, 453, 727
NaeI	GCCGGC	1 cut(s)	521
NciI	CCSGG	2 cut(s)	194, 666
NcoI	CCATGG	3 cut(s)	180, 555, 971
NdeII	GATC	9 cut(s)	40, 354, 471, 682, 868, 901, 928, 1471, 1485
NgoMIV	GCCGGC	1 cut(s)	519
NlaIII	CATG	7 cut(s)	184, 361, 439, 559, 975, 1312, 1513
NlaIV	GGNNCC	3 cut(s)	795, 1207, 1270
NmeAIII	GCCGAG	3 cut(s)	150, 201, 251
NmuCI	GTSAC	6 cut(s)	241, 253, 529, 548, 1427, 1537
NsbI	TGCGCA	1 cut(s)	725
OliI	CACNNNNGTG	1 cut(s)	536
PauI	GCGCGC	1 cut(s)	499
PceI	AGGCCT	1 cut(s)	1191
PciSI	GCTCTTC	1 cut(s)	467
PcsI	WCGNNNNNNNCGW	3 cut(s)	318, 327, 333
PdiI	GCCGGC	1 cut(s)	521
PdmI	GAANNNNTTC	1 cut(s)	1040
PfeI	GAWTC	1 cut(s)	511
Pfl23II	CGTACG	1 cut(s)	405
PflFI	GACNNNGTC	1 cut(s)	326
PleI	GAGTC	6 cut(s)	26, 250, 274, 611, 639, 1228
PpsI	GAGTC	6 cut(s)	26, 250, 274, 611, 639, 1228
PsiI	TTATAA	1 cut(s)	1292
Psp124BI	GAGCTC	4 cut(s)	222, 396, 444, 462
PspFI	CCCAGC	1 cut(s)	1201
PspLI	CGTACG	1 cut(s)	405
PspN4I	GGNNCC	3 cut(s)	795, 1207, 1270
PspPI	GGNCC	4 cut(s)	195, 349, 412, 1330
PstI	CTGCAG	1 cut(s)	17
PsuI	RGATCY	3 cut(s)	682, 901, 1471
PsyI	GACNNNGTC	1 cut(s)	326
PteI	GCGCGC	1 cut(s)	499
RsaI	GTAC	3 cut(s)	407, 1207, 1379
RsaNI	GTAC	3 cut(s)	406, 1206, 1378
RseI	CAYNNNNRTG	3 cut(s)	536, 560, 1385
SacI	GAGCTC	4 cut(s)	222, 396, 444, 462
SapI	GCTCTTC	1 cut(s)	467
SaqAI	TTAA	4 cut(s)	1134, 1181, 1410, 1443
Sau3AI	GATC	9 cut(s)	40, 354, 471, 682, 868, 901, 928, 1471, 1485
Sau96I	GGNCC	4 cut(s)	195, 349, 412, 1330
SchI	GAGTC	6 cut(s)	26, 250, 275, 611, 639, 1229
ScrFI	CCNGG	2 cut(s)	194, 666
SduI	GDGCHC	5 cut(s)	222, 396, 444, 462, 489
SfaNI	GCATC	3 cut(s)	823, 966, 1004
SfcI	CTRYAG	1 cut(s)	13
SinI	GGWCC	3 cut(s)	349, 412, 1330
SmiMI	CAYNNNNRTG	3 cut(s)	536, 560, 1385
SmlI	CTYRAG	2 cut(s)	626, 1409
SmoI	CTYRAG	2 cut(s)	626, 1409
Sse9I	AATT	6 cut(s)	233, 278, 589, 1083, 1164, 1394
SseBI	AGGCCT	1 cut(s)	1191
SspI	AATATT	1 cut(s)	1355
SspMI	CTAG	1 cut(s)	1029
SstI	GAGCTC	4 cut(s)	222, 396, 444, 462
StuI	AGGCCT	1 cut(s)	1191
StyD4I	CCNGG	2 cut(s)	192, 664
StyI	CCWWGG	5 cut(s)	180, 480, 555, 872, 971
TaaI	ACNGT	4 cut(s)	535, 548, 1041, 1236
TaiI	ACGT	4 cut(s)	75, 192, 330, 339
TaqI	TCGA	5 cut(s)	330, 390, 465, 922, 1359
TaqII	GACCGA	1 cut(s)	412
TasI	AATT	6 cut(s)	233, 278, 589, 1083, 1164, 1394
TfiI	GAWTC	1 cut(s)	511
Tru1I	TTAA	4 cut(s)	1134, 1181, 1410, 1443
Tru9I	TTAA	4 cut(s)	1134, 1181, 1410, 1443
TscAI	CASTG	1 cut(s)	898
TseFI	GTSAC	6 cut(s)	241, 253, 529, 548, 1427, 1537
TseI	GCWGC	4 cut(s)	15, 26, 721, 947
Tsp45I	GTSAC	6 cut(s)	241, 253, 529, 548, 1427, 1537
TspDTI	ATGAA	5 cut(s)	831, 1049, 1067, 1122, 1325
TspRI	CASTG	1 cut(s)	898
Tth111I	GACNNNGTC	1 cut(s)	326
Vha464I	CTTAAG	1 cut(s)	1409
VpaK11BI	GGWCC	3 cut(s)	349, 412, 1330
XapI	RAATTY	1 cut(s)	589
XbaI	TCTAGA	1 cut(s)	1028
XmnI	GAANNNNTTC	1 cut(s)	1040
XspI	CTAG	1 cut(s)	1029
ZraI	GACGTC	3 cut(s)	190, 328, 337

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.