Calcium-dependent protein kinase
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G23650 |
| fragaria_vesca | FvH4_5g03610 FvH4_5g03610 FvH4_5g03610 |
| malus_domestica | MD06G1095900.v1.1 MD14G1116100.v1.1 |
| prunus_persica | Prupe.5G110500_v2.0.a1 |
| rosa_chinensis | RchiOBHm_Chr7g0196111 |
| rosa_laevigata | RLG00000004064 |
| rosa_multiflora | Rmu_sc0013391.1_g000002 |
| rosa_roxburghii | Rroxscaffold_3G00259800 |
| rosa_rugosa | Rorug07G0030700 |
| rosa_samantha | Rh7AG156500 Rh7BG158100 Rh7CG162000 |
| rosa_wichuraiana | Rw7G013370 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1313 |
| AatII | GACGTC | 3 cut(s) | 213, 351, 360 |
| AccB1I | GGYRCC | 1 cut(s) | 23 |
| AccBSI | CCGCTC | 2 cut(s) | 646, 1395 |
| AccII | CGCG | 3 cut(s) | 186, 237, 249 |
| AclWI | GGATC | 5 cut(s) | 53, 500, 711, 884, 1541 |
| AcoI | YGGCCR | 6 cut(s) | 181, 193, 232, 244, 250, 394 |
| AcsI | RAATTY | 1 cut(s) | 610 |
| AcuI | CTGAAG | 2 cut(s) | 1143, 1266 |
| AcyI | GRCGYC | 5 cut(s) | 24, 210, 261, 348, 357 |
| AfaI | GTAC | 1 cut(s) | 1400 |
| AflII | CTTAAG | 1 cut(s) | 1430 |
| AgsI | TTSAA | 8 cut(s) | 601, 682, 977, 1099, 1144, 1156, 1196, 1373 |
| AjnI | CCWGG | 2 cut(s) | 685, 893 |
| AleI | CACNNNNGTG | 1 cut(s) | 557 |
| Alw21I | GWGCWC | 4 cut(s) | 243, 417, 465, 483 |
| Alw26I | GTCTC | 1 cut(s) | 1246 |
| AlwI | GGATC | 5 cut(s) | 53, 500, 711, 884, 1541 |
| ApeKI | GCWGC | 9 cut(s) | 15, 18, 158, 295, 524, 527, 742, 968, 1526 |
| ApoI | RAATTY | 1 cut(s) | 610 |
| AseI | ATTAAT | 1 cut(s) | 1509 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1061 |
| AspLEI | GCGC | 2 cut(s) | 26, 470 |
| AspS9I | GGNCC | 5 cut(s) | 37, 97, 370, 868, 1351 |
| AsuHPI | GGTGA | 9 cut(s) | 256, 268, 382, 488, 544, 595, 799, 1022, 1460 |
| AvaII | GGWCC | 3 cut(s) | 97, 370, 1351 |
| BanI | GGYRCC | 1 cut(s) | 23 |
| BanII | GRGCYC | 5 cut(s) | 243, 417, 465, 483, 669 |
| BbsI | GAAGAC | 3 cut(s) | 213, 360, 1205 |
| Bbv12I | GWGCWC | 4 cut(s) | 243, 417, 465, 483 |
| BbvCI | CCTCAGC | 1 cut(s) | 762 |
| BbvI | GCAGC | 9 cut(s) | 27, 30, 145, 307, 511, 539, 729, 980, 1538 |
| BccI | CCATC | 9 cut(s) | 85, 185, 323, 405, 571, 1001, 1255, 1274, 1493 |
| BceAI | ACGGC | 3 cut(s) | 100, 348, 525 |
| BcgI | CGANNNNNNTGC | 6 cut(s) | 298, 332, 391, 425, 506, 540 |
| BciT130I | CCWGG | 2 cut(s) | 687, 895 |
| BcoDI | GTCTC | 1 cut(s) | 1246 |
| BfaI | CTAG | 3 cut(s) | 909, 1050, 1223 |
| BfmI | CTRYAG | 2 cut(s) | 13, 525 |
| BfoI | RGCGCY | 1 cut(s) | 27 |
| BfrI | CTTAAG | 1 cut(s) | 1430 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 258 |
| BglII | AGATCT | 1 cut(s) | 922 |
| Bme1390I | CCNGG | 2 cut(s) | 687, 895 |
| Bme18I | GGWCC | 3 cut(s) | 97, 370, 1351 |
| BmgT120I | GGNCC | 5 cut(s) | 37, 97, 370, 868, 1351 |
| BmiI | GGNNCC | 4 cut(s) | 25, 98, 869, 1228 |
| BmrFI | CCNGG | 2 cut(s) | 687, 895 |
| BmsI | GCATC | 6 cut(s) | 62, 576, 844, 987, 1003, 1025 |
| BpiI | GAAGAC | 3 cut(s) | 213, 360, 1205 |
| Bpu10I | CCTNAGC | 1 cut(s) | 762 |
| BpuEI | CTTGAG | 4 cut(s) | 401, 632, 643, 1067 |
| BsaHI | GRCGYC | 5 cut(s) | 24, 210, 261, 348, 357 |
| BsaJI | CCNNGG | 7 cut(s) | 33, 190, 201, 247, 893, 992, 1161 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 425, 455 |
| Bse118I | RCCGGY | 2 cut(s) | 392, 470 |
| Bse1I | ACTGG | 1 cut(s) | 1560 |
| Bse3DI | GCAATG | 1 cut(s) | 1077 |
| BseBI | CCWGG | 2 cut(s) | 687, 895 |
| BseDI | CCNNGG | 7 cut(s) | 33, 190, 201, 247, 893, 992, 1161 |
| BseGI | GGATG | 3 cut(s) | 988, 1002, 1285 |
| BseMI | GCAATG | 1 cut(s) | 1077 |
| BseMII | CTCAG | 2 cut(s) | 753, 1230 |
| BseNI | ACTGG | 1 cut(s) | 1560 |
| BseX3I | CGGCCG | 3 cut(s) | 181, 193, 244 |
| BseXI | GCAGC | 9 cut(s) | 27, 30, 145, 307, 511, 539, 729, 980, 1538 |
| BseYI | CCCAGC | 1 cut(s) | 132 |
| BsgI | GTGCAG | 1 cut(s) | 801 |
| Bsh1236I | CGCG | 3 cut(s) | 186, 237, 249 |
| Bsh1285I | CGRYCG | 5 cut(s) | 73, 184, 196, 247, 490 |
| BshNI | GGYRCC | 1 cut(s) | 23 |
| BsiEI | CGRYCG | 5 cut(s) | 73, 184, 196, 247, 490 |
| BsiHKAI | GWGCWC | 4 cut(s) | 243, 417, 465, 483 |
| BsiSI | CCGG | 3 cut(s) | 393, 471, 605 |
| BslFI | GGGAC | 1 cut(s) | 800 |
| BsmAI | GTCTC | 1 cut(s) | 1246 |
| BsmFI | GGGAC | 1 cut(s) | 800 |
| Bsp1286I | GDGCHC | 5 cut(s) | 243, 417, 465, 483, 669 |
| Bsp143I | GATC | 9 cut(s) | 58, 375, 487, 492, 546, 703, 889, 922, 1546 |
| Bsp19I | CCATGG | 3 cut(s) | 201, 992, 1161 |
| BspCNI | CTCAG | 2 cut(s) | 754, 1231 |
| BspFNI | CGCG | 3 cut(s) | 186, 237, 249 |
| BspLI | GGNNCC | 4 cut(s) | 25, 98, 869, 1228 |
| BspMAI | CTGCAG | 2 cut(s) | 17, 529 |
| BspPI | GGATC | 5 cut(s) | 53, 500, 711, 884, 1541 |
| BspQI | GCTCTTC | 1 cut(s) | 488 |
| BspT107I | GGYRCC | 1 cut(s) | 23 |
| BspTI | CTTAAG | 1 cut(s) | 1430 |
| BsrBI | CCGCTC | 2 cut(s) | 646, 1395 |
| BsrDI | GCAATG | 1 cut(s) | 1077 |
| BsrFI | RCCGGY | 2 cut(s) | 392, 470 |
| BsrI | ACTGG | 1 cut(s) | 1560 |
| BssAI | RCCGGY | 2 cut(s) | 392, 470 |
| BssECI | CCNNGG | 7 cut(s) | 33, 190, 201, 247, 893, 992, 1161 |
| BssMI | GATC | 9 cut(s) | 58, 375, 487, 492, 546, 703, 889, 922, 1546 |
| BssNI | GRCGYC | 5 cut(s) | 24, 210, 261, 348, 357 |
| BssT1I | CCWWGG | 3 cut(s) | 201, 992, 1161 |
| Bst2UI | CCWGG | 2 cut(s) | 687, 895 |
| Bst4CI | ACNGT | 6 cut(s) | 556, 569, 1062, 1178, 1257, 1408 |
| Bst6I | CTCTTC | 3 cut(s) | 488, 1119, 1191 |
| BstACI | GRCGYC | 5 cut(s) | 24, 210, 261, 348, 357 |
| BstAFI | CTTAAG | 1 cut(s) | 1430 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 12 |
| BstC8I | GCNNGC | 6 cut(s) | 239, 307, 329, 472, 522, 1425 |
| BstDEI | CTNAG | 4 cut(s) | 762, 806, 954, 1239 |
| BstDSI | CCRYGG | 4 cut(s) | 201, 247, 992, 1161 |
| BstF5I | GGATG | 3 cut(s) | 988, 1002, 1285 |
| BstFNI | CGCG | 3 cut(s) | 186, 237, 249 |
| BstH2I | RGCGCY | 1 cut(s) | 27 |
| BstHHI | GCGC | 2 cut(s) | 26, 470 |
| BstKTI | GATC | 9 cut(s) | 61, 378, 490, 495, 549, 706, 892, 925, 1549 |
| BstMAI | GTCTC | 1 cut(s) | 1246 |
| BstMBI | GATC | 9 cut(s) | 58, 375, 487, 492, 546, 703, 889, 922, 1546 |
| BstMCI | CGRYCG | 5 cut(s) | 73, 184, 196, 247, 490 |
| BstMWI | GCNNNNNNNGC | 8 cut(s) | 12, 21, 164, 192, 243, 258, 292, 748 |
| BstNI | CCWGG | 2 cut(s) | 687, 895 |
| BstSCI | CCNGG | 2 cut(s) | 685, 893 |
| BstSFI | CTRYAG | 2 cut(s) | 13, 525 |
| BstUI | CGCG | 3 cut(s) | 186, 237, 249 |
| BstV1I | GCAGC | 9 cut(s) | 27, 30, 145, 307, 511, 539, 729, 980, 1538 |
| BstV2I | GAAGAC | 3 cut(s) | 213, 360, 1205 |
| BstX2I | RGATCY | 2 cut(s) | 703, 922 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 825 |
| BstYI | RGATCY | 2 cut(s) | 703, 922 |
| BstZI | CGGCCG | 3 cut(s) | 181, 193, 244 |
| BtgI | CCRYGG | 4 cut(s) | 201, 247, 992, 1161 |
| BtgZI | GCGATG | 3 cut(s) | 301, 383, 481 |
| BtsCI | GGATG | 3 cut(s) | 988, 1002, 1285 |
| BtsI | GCAGTG | 1 cut(s) | 919 |
| BtsIMutI | CAGTG | 3 cut(s) | 919, 1183, 1413 |
| Cac8I | GCNNGC | 6 cut(s) | 239, 307, 329, 472, 522, 1425 |
| CfoI | GCGC | 2 cut(s) | 26, 470 |
| Cfr10I | RCCGGY | 2 cut(s) | 392, 470 |
| Cfr13I | GGNCC | 5 cut(s) | 37, 97, 370, 868, 1351 |
| Cfr42I | CCGCGG | 1 cut(s) | 250 |
| CseI | GACGC | 3 cut(s) | 175, 250, 734 |
| Csp6I | GTAC | 1 cut(s) | 1399 |
| CviAII | CATG | 7 cut(s) | 202, 379, 457, 993, 1162, 1330, 1531 |
| CviQI | GTAC | 1 cut(s) | 1399 |
| DdeI | CTNAG | 4 cut(s) | 762, 806, 954, 1239 |
| DinI | GGCGCC | 1 cut(s) | 25 |
| DpnI | GATC | 9 cut(s) | 60, 377, 489, 494, 548, 705, 891, 924, 1548 |
| DpnII | GATC | 9 cut(s) | 58, 375, 487, 492, 546, 703, 889, 922, 1546 |
| DraI | TTTAAA | 1 cut(s) | 984 |
| EaeI | YGGCCR | 6 cut(s) | 181, 193, 232, 244, 250, 394 |
| EagI | CGGCCG | 3 cut(s) | 181, 193, 244 |
| Eam1104I | CTCTTC | 3 cut(s) | 488, 1119, 1191 |
| EarI | CTCTTC | 3 cut(s) | 488, 1119, 1191 |
| EciI | GGCGGA | 2 cut(s) | 154, 350 |
| Ecl136II | GAGCTC | 4 cut(s) | 241, 415, 463, 481 |
| EclXI | CGGCCG | 3 cut(s) | 181, 193, 244 |
| Eco130I | CCWWGG | 3 cut(s) | 201, 992, 1161 |
| Eco24I | GRGCYC | 5 cut(s) | 243, 417, 465, 483, 669 |
| Eco47I | GGWCC | 3 cut(s) | 97, 370, 1351 |
| Eco52I | CGGCCG | 3 cut(s) | 181, 193, 244 |
| Eco53kI | GAGCTC | 4 cut(s) | 241, 415, 463, 481 |
| Eco57I | CTGAAG | 2 cut(s) | 1143, 1266 |
| EcoICRI | GAGCTC | 4 cut(s) | 241, 415, 463, 481 |
| EcoO109I | RGGNCCY | 1 cut(s) | 97 |
| EcoRII | CCWGG | 2 cut(s) | 685, 893 |
| EcoT14I | CCWWGG | 3 cut(s) | 201, 992, 1161 |
| EcoT22I | ATGCAT | 2 cut(s) | 591, 1018 |
| EcoT38I | GRGCYC | 5 cut(s) | 243, 417, 465, 483, 669 |
| EgeI | GGCGCC | 1 cut(s) | 25 |
| EheI | GGCGCC | 1 cut(s) | 25 |
| ErhI | CCWWGG | 3 cut(s) | 201, 992, 1161 |
| FaeI | CATG | 7 cut(s) | 205, 382, 460, 996, 1165, 1333, 1534 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1197, 1229 |
| FaqI | GGGAC | 1 cut(s) | 800 |
| FatI | CATG | 7 cut(s) | 201, 378, 456, 992, 1161, 1329, 1530 |
| FauI | CCCGC | 3 cut(s) | 124, 332, 1388 |
| FokI | GGATG | 3 cut(s) | 975, 1009, 1292 |
| FriOI | GRGCYC | 5 cut(s) | 243, 417, 465, 483, 669 |
| FspBI | CTAG | 3 cut(s) | 909, 1050, 1223 |
| GlaI | GCGC | 2 cut(s) | 25, 469 |
| GsaI | CCCAGC | 1 cut(s) | 136 |
| HaeII | RGCGCY | 1 cut(s) | 27 |
| HapII | CCGG | 3 cut(s) | 393, 471, 605 |
| HgaI | GACGC | 3 cut(s) | 175, 250, 734 |
| HhaI | GCGC | 2 cut(s) | 26, 470 |
| Hin1I | GRCGYC | 5 cut(s) | 24, 210, 261, 348, 357 |
| Hin1II | CATG | 7 cut(s) | 205, 382, 460, 996, 1165, 1333, 1534 |
| Hin6I | GCGC | 2 cut(s) | 24, 468 |
| HinP1I | GCGC | 2 cut(s) | 24, 468 |
| HincII | GTYRAC | 2 cut(s) | 448, 1486 |
| HindII | GTYRAC | 2 cut(s) | 448, 1486 |
| HindIII | AAGCTT | 1 cut(s) | 1232 |
| HinfI | GANTC | 5 cut(s) | 44, 532, 638, 813, 1241 |
| HpaII | CCGG | 3 cut(s) | 393, 471, 605 |
| HphI | GGTGA | 9 cut(s) | 256, 268, 382, 488, 544, 595, 799, 1022, 1460 |
| Hpy166II | GTNNAC | 2 cut(s) | 448, 1486 |
| Hpy188III | TCNNGA | 8 cut(s) | 68, 373, 622, 734, 1031, 1050, 1084, 1550 |
| Hpy8I | GTNNAC | 2 cut(s) | 448, 1486 |
| Hpy99I | CGWCG | 6 cut(s) | 347, 350, 353, 413, 560, 750 |
| HpyAV | CCTTC | 4 cut(s) | 909, 1093, 1138, 1497 |
| HpyCH4III | ACNGT | 6 cut(s) | 556, 569, 1062, 1178, 1257, 1408 |
| HpyCH4IV | ACGT | 3 cut(s) | 210, 348, 357 |
| HpyF10VI | GCNNNNNNNGC | 8 cut(s) | 12, 21, 164, 192, 243, 258, 292, 748 |
| HpyF3I | CTNAG | 4 cut(s) | 762, 806, 954, 1239 |
| HpySE526I | ACGT | 3 cut(s) | 210, 348, 357 |
| Hsp92I | GRCGYC | 5 cut(s) | 24, 210, 261, 348, 357 |
| Hsp92II | CATG | 7 cut(s) | 205, 382, 460, 996, 1165, 1333, 1534 |
| HspAI | GCGC | 2 cut(s) | 24, 468 |
| KasI | GGCGCC | 1 cut(s) | 23 |
| KroI | GCCGGC | 1 cut(s) | 470 |
| KroNI | GCCGGC | 1 cut(s) | 472 |
| KspI | CCGCGG | 1 cut(s) | 250 |
| Kzo9I | GATC | 9 cut(s) | 58, 375, 487, 492, 546, 703, 889, 922, 1546 |
| LguI | GCTCTTC | 1 cut(s) | 488 |
| LmnI | GCTCC | 6 cut(s) | 422, 460, 736, 758, 945, 1420 |
| Lsp1109I | GCAGC | 9 cut(s) | 27, 30, 145, 307, 511, 539, 729, 980, 1538 |
| LweI | GCATC | 6 cut(s) | 62, 576, 844, 987, 1003, 1025 |
| MaeI | CTAG | 3 cut(s) | 909, 1050, 1223 |
| MaeII | ACGT | 3 cut(s) | 210, 348, 357 |
| MaeIII | GTNAC | 5 cut(s) | 65, 262, 274, 550, 1558 |
| MalI | GATC | 9 cut(s) | 60, 377, 489, 494, 548, 705, 891, 924, 1548 |
| MbiI | CCGCTC | 2 cut(s) | 646, 1395 |
| MboI | GATC | 9 cut(s) | 58, 375, 487, 492, 546, 703, 889, 922, 1546 |
| MfeI | CAATTG | 1 cut(s) | 1293 |
| MflI | RGATCY | 2 cut(s) | 703, 922 |
| MhlI | GDGCHC | 5 cut(s) | 243, 417, 465, 483, 669 |
| MluCI | AATT | 8 cut(s) | 254, 610, 1104, 1185, 1293, 1415, 1461, 1510 |
| Mly113I | GGCGCC | 1 cut(s) | 24 |
| MlyI | GAGTC | 4 cut(s) | 38, 632, 822, 1250 |
| Mph1103I | ATGCAT | 2 cut(s) | 591, 1018 |
| MreI | CGCCGGCG | 1 cut(s) | 470 |
| MroNI | GCCGGC | 1 cut(s) | 470 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1061 |
| MseI | TTAA | 6 cut(s) | 699, 983, 1202, 1431, 1464, 1509 |
| MslI | CAYNNNNRTG | 2 cut(s) | 557, 1406 |
| MspA1I | CMGCKG | 3 cut(s) | 21, 158, 249 |
| MspCI | CTTAAG | 1 cut(s) | 1430 |
| MspI | CCGG | 3 cut(s) | 393, 471, 605 |
| MspR9I | CCNGG | 2 cut(s) | 687, 895 |
| MunI | CAATTG | 1 cut(s) | 1293 |
| MvaI | CCWGG | 2 cut(s) | 687, 895 |
| MvnI | CGCG | 3 cut(s) | 186, 237, 249 |
| MwoI | GCNNNNNNNGC | 8 cut(s) | 12, 21, 164, 192, 243, 258, 292, 748 |
| NaeI | GCCGGC | 1 cut(s) | 472 |
| NarI | GGCGCC | 1 cut(s) | 24 |
| NcoI | CCATGG | 3 cut(s) | 201, 992, 1161 |
| NdeII | GATC | 9 cut(s) | 58, 375, 487, 492, 546, 703, 889, 922, 1546 |
| NgoMIV | GCCGGC | 1 cut(s) | 470 |
| NlaIII | CATG | 7 cut(s) | 205, 382, 460, 996, 1165, 1333, 1534 |
| NlaIV | GGNNCC | 4 cut(s) | 25, 98, 869, 1228 |
| NmeAIII | GCCGAG | 3 cut(s) | 14, 171, 222 |
| NmuCI | GTSAC | 5 cut(s) | 65, 262, 274, 550, 1558 |
| NsiI | ATGCAT | 2 cut(s) | 591, 1018 |
| OliI | CACNNNNGTG | 1 cut(s) | 557 |
| PciSI | GCTCTTC | 1 cut(s) | 488 |
| PcsI | WCGNNNNNNNCGW | 3 cut(s) | 348, 354, 555 |
| PdiI | GCCGGC | 1 cut(s) | 472 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1061 |
| PfeI | GAWTC | 1 cut(s) | 532 |
| PflFI | GACNNNGTC | 1 cut(s) | 347 |
| Ple19I | CGATCG | 1 cut(s) | 490 |
| PleI | GAGTC | 4 cut(s) | 38, 632, 821, 1249 |
| PluTI | GGCGCC | 1 cut(s) | 27 |
| PpsI | GAGTC | 4 cut(s) | 38, 632, 821, 1249 |
| PpuMI | RGGWCCY | 1 cut(s) | 97 |
| PshBI | ATTAAT | 1 cut(s) | 1509 |
| PsiI | TTATAA | 1 cut(s) | 1313 |
| Psp124BI | GAGCTC | 4 cut(s) | 243, 417, 465, 483 |
| Psp5II | RGGWCCY | 1 cut(s) | 97 |
| Psp6I | CCWGG | 2 cut(s) | 685, 893 |
| PspFI | CCCAGC | 1 cut(s) | 132 |
| PspGI | CCWGG | 2 cut(s) | 685, 893 |
| PspN4I | GGNNCC | 4 cut(s) | 25, 98, 869, 1228 |
| PspPI | GGNCC | 5 cut(s) | 37, 97, 370, 868, 1351 |
| PspPPI | RGGWCCY | 1 cut(s) | 97 |
| PstI | CTGCAG | 2 cut(s) | 17, 529 |
| PsuI | RGATCY | 2 cut(s) | 703, 922 |
| PsyI | GACNNNGTC | 1 cut(s) | 347 |
| PvuI | CGATCG | 1 cut(s) | 490 |
| RsaI | GTAC | 1 cut(s) | 1400 |
| RsaNI | GTAC | 1 cut(s) | 1399 |
| RseI | CAYNNNNRTG | 2 cut(s) | 557, 1406 |
| SacI | GAGCTC | 4 cut(s) | 243, 417, 465, 483 |
| SacII | CCGCGG | 1 cut(s) | 250 |
| SapI | GCTCTTC | 1 cut(s) | 488 |
| SaqAI | TTAA | 6 cut(s) | 699, 983, 1202, 1431, 1464, 1509 |
| Sau3AI | GATC | 9 cut(s) | 58, 375, 487, 492, 546, 703, 889, 922, 1546 |
| Sau96I | GGNCC | 5 cut(s) | 37, 97, 370, 868, 1351 |
| SchI | GAGTC | 4 cut(s) | 38, 632, 822, 1250 |
| ScrFI | CCNGG | 2 cut(s) | 687, 895 |
| SduI | GDGCHC | 5 cut(s) | 243, 417, 465, 483, 669 |
| SfaNI | GCATC | 6 cut(s) | 62, 576, 844, 987, 1003, 1025 |
| SfcI | CTRYAG | 2 cut(s) | 13, 525 |
| SfoI | GGCGCC | 1 cut(s) | 25 |
| Sfr303I | CCGCGG | 1 cut(s) | 250 |
| SgrAI | CRCCGGYG | 1 cut(s) | 470 |
| SgrBI | CCGCGG | 1 cut(s) | 250 |
| SinI | GGWCC | 3 cut(s) | 97, 370, 1351 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 557, 1406 |
| SmlI | CTYRAG | 5 cut(s) | 416, 622, 647, 1082, 1430 |
| SmoI | CTYRAG | 5 cut(s) | 416, 622, 647, 1082, 1430 |
| Sse9I | AATT | 8 cut(s) | 254, 610, 1104, 1185, 1293, 1415, 1461, 1510 |
| SspDI | GGCGCC | 1 cut(s) | 23 |
| SspI | AATATT | 1 cut(s) | 1376 |
| SspMI | CTAG | 3 cut(s) | 909, 1050, 1223 |
| SstI | GAGCTC | 4 cut(s) | 243, 417, 465, 483 |
| StyD4I | CCNGG | 2 cut(s) | 685, 893 |
| StyI | CCWWGG | 3 cut(s) | 201, 992, 1161 |
| TaaI | ACNGT | 6 cut(s) | 556, 569, 1062, 1178, 1257, 1408 |
| TaiI | ACGT | 3 cut(s) | 213, 351, 360 |
| TaqI | TCGA | 4 cut(s) | 351, 411, 486, 575 |
| TasI | AATT | 8 cut(s) | 254, 610, 1104, 1185, 1293, 1415, 1461, 1510 |
| TauI | GCSGC | 9 cut(s) | 24, 90, 186, 198, 237, 249, 252, 646, 1271 |
| TfiI | GAWTC | 1 cut(s) | 532 |
| Tru1I | TTAA | 6 cut(s) | 699, 983, 1202, 1431, 1464, 1509 |
| Tru9I | TTAA | 6 cut(s) | 699, 983, 1202, 1431, 1464, 1509 |
| TscAI | CASTG | 3 cut(s) | 919, 1183, 1413 |
| TseFI | GTSAC | 5 cut(s) | 65, 262, 274, 550, 1558 |
| TseI | GCWGC | 9 cut(s) | 15, 18, 158, 295, 524, 527, 742, 968, 1526 |
| Tsp45I | GTSAC | 5 cut(s) | 65, 262, 274, 550, 1558 |
| TspDTI | ATGAA | 4 cut(s) | 852, 1070, 1088, 1346 |
| TspGWI | ACGGA | 2 cut(s) | 203, 433 |
| TspRI | CASTG | 3 cut(s) | 919, 1183, 1413 |
| Tth111I | GACNNNGTC | 1 cut(s) | 347 |
| Vha464I | CTTAAG | 1 cut(s) | 1430 |
| VpaK11BI | GGWCC | 3 cut(s) | 97, 370, 1351 |
| VspI | ATTAAT | 1 cut(s) | 1509 |
| XapI | RAATTY | 1 cut(s) | 610 |
| XbaI | TCTAGA | 1 cut(s) | 1049 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1061 |
| XspI | CTAG | 3 cut(s) | 909, 1050, 1223 |
| ZraI | GACGTC | 3 cut(s) | 211, 349, 358 |
| Zsp2I | ATGCAT | 2 cut(s) | 591, 1018 |