Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7B

Orthogroup ID

OG0014884

Physical Location & Seq

Genomic Coordinates Forward (+)

11874421 .. 11878439

Gene Structure 4019 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7BG158100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1407 bp

ATGGGCGGCAACTGCAGCACCGCCGCCGGAGACGCTCCCGATCCCCGCCCCTCCAACGGCCACGTCCAGGTCCTCCCCCCAAATGCCGCCCCGACCCGACCCGCCCCGCCCAAACCCCACACCACCACCCCAACCACCACCACCGCCATCGGCCGCGTCCTCGGCAAGCCCATGGAGGACGTCCGCTCCACCTACACCTTCGGCCGCGAGCTCGGCCGCGGCCAATTCGGCGTCACCTACCTCGTGACTCACAAAGAGACCAAGCAGCAGTTCGCCTGCAAATCCATCGCTACTCGGAAGCTGATCAACCACGACGACGTGGAGGACGTCCGCCGTGAGGTCCAGATCATGCACCACCTCACCGGCCACCGCAACATCGTCGAGCTCAAGGGCGCGTACGAGGACCGCCACTCGGTCAACCTGGTCATGGAGCTCTGCGCCGGCGGCGAGCTTTTCGATAGGATCATCGCCAAGGGCCACTATTCGGAGCGGGCGGCGGCGAATCTCTGCCGTCAGATGGTGACCGTCGTGCATTACTGTCACTCTATGGGGGTGTTTCACAGGGACTTGAAGCCGGAGAATTTCTTGCTGTTGAGTAAGGATGAGGACTCGCCGCTCAAGGCCACCGATTTCGGACTCTCCGTGTTCTTCAAGCCCGAGAATGAACAGGGTATCTTTGATGCTATTCTTCGGGGTCACATTGATTTCTCATCTGATCCTTGGCCTTCCATATCCAGCAGTGCCAAAGATCTTGTGAAGAAAATGCTTCGAGCTGATCCAAAGGAACGGCTTGCAGCAGTGGATGTCCTTAATCATCCATGGATGCGAGAAGATGGCGATGCATCTGATAAACCTCTTGATATTGCTGTTTTATCTAGAATGAAACAGTTCAGGGCAATGAACAAACTCAAGAAAGTTGCATTGAAGGTAATTGCAGAAAATCTTTCTGAAGAGGAAATCATAGGCTTGAAGGAAATGTTTAAATCAATGGACACAGATAACAGTGGAACAATTACATTTGAAGAGTTAAAAGCGGGCCTTCCAAAGCTGGGTACCAAGCTTTCTGAGTCTGAAGTGAGACAGTTGATGGAAGCGGCTGATGTTGATGGCAATGGAACAATTGATTACATTGAGTTTATAACCGCTACTATGCACATGAACAGAATGGATAGAGAGGACCATTTATACACAGCCTTTGAATATTTCGACAAGGACAAGAGCGGGTACATCACGATGGAAGAATTGGAGCAAGCACTTAAGAAGTATAATATGGGTGATGAACAAACGATTAAGGAAATCATCGCAGAAGTTGACACAGACCTTGATGGAAGGATCAACTATGATGAGTTTGTTGCCATGATGAGGAAAGGAAATCCTGAGTTGGTCACAAACAGAAGAAGAAAGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004683 GO:0005488 GO:0005515 GO:0005516 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005773 GO:0005829 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006970 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0009628 GO:0009651 GO:0009719 GO:0009725 GO:0009737 GO:0009738 GO:0009755 GO:0009931 GO:0009987 GO:0010033 GO:0010119 GO:0010359 GO:0010857 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0018105 GO:0018193 GO:0018209 GO:0019538 GO:0022898 GO:0023052 GO:0032409 GO:0032412 GO:0032870 GO:0032879 GO:0033993 GO:0034762 GO:0034765 GO:0035556 GO:0036211 GO:0042221 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043269 GO:0043412 GO:0044070 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0046777 GO:0050789 GO:0050794 GO:0050896 GO:0051049 GO:0051716 GO:0065007 GO:0065009 GO:0070887 GO:0071215 GO:0071229 GO:0071310 GO:0071396 GO:0071495 GO:0071704 GO:0071944 GO:0097305 GO:0097306 GO:0140096 GO:1901564 GO:1901700 GO:1901701 GO:1903959

KEGG Pathways

Metabolic & Signaling

ko04626 ko05145 map04626 map05145

Pfam Domains

Protein Families

EF-hand_1 EF-hand_5 EF-hand_6 Pkinase

Protein Analysis

468

Amino Acids

52.73

Weight (kDa)

5.93

Isoelectric Point (pI)

35.2

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	65 - 221	1.6e-44	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	66 - 218	3.1e-21	Protein tyrosine and serine/threonine kinase
Pkinase	PF00069	228 - 275	8.6e-08	Protein kinase domain
EF-hand_1	PF00036	323 - 349	6.6e-08	EF hand domain
EF-hand_7	PF13499	323 - 383	2.7e-13	EF-hand domain pair
EF-hand_6	PF13405	323 - 351	1.7e-06	EF-hand domain
EF-hand_8	PF13833	335 - 381	1.6e-07	EF-hand domain pair
EF-hand_7	PF13499	392 - 455	1e-16	EF-hand domain pair
EF-hand_6	PF13405	395 - 422	5.5e-07	EF-hand domain
EF-hand_1	PF00036	397 - 421	2.2e-06	EF hand domain
EF-hand_8	PF13833	407 - 456	4.8e-08	EF-hand domain pair
EF-hand_1	PF00036	430 - 456	3.1e-07	EF hand domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0014884)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G23650
fragaria_vesca	FvH4_5g03610 FvH4_5g03610 FvH4_5g03610
malus_domestica	MD06G1095900.v1.1 MD14G1116100.v1.1
prunus_persica	Prupe.5G110500_v2.0.a1
rosa_chinensis	RchiOBHm_Chr7g0196111
rosa_laevigata	RLG00000004064
rosa_multiflora	Rmu_sc0013391.1_g000002
rosa_roxburghii	Rroxscaffold_3G00259800
rosa_rugosa	Rorug07G0030700
rosa_samantha	Rh7AG156500 Rh7BG158100 Rh7CG162000
rosa_wichuraiana	Rw7G013370

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1139
AatII	GACGTC	2 cut(s)	183, 330
Acc65I	GGTACC	1 cut(s)	1052
AccB1I	GGYRCC	1 cut(s)	1052
AccBSI	CCGCTC	4 cut(s)	186, 490, 616, 1221
AccII	CGCG	4 cut(s)	156, 207, 219, 395
AclWI	GGATC	5 cut(s)	35, 470, 710, 770, 1340
AcoI	YGGCCR	6 cut(s)	58, 151, 202, 214, 220, 364
AcsI	RAATTY	1 cut(s)	580
AcuI	CTGAAG	2 cut(s)	969, 1092
AcyI	GRCGYC	3 cut(s)	180, 231, 327
AfaI	GTAC	3 cut(s)	398, 1054, 1226
AfiI	CCNNNNNNNGG	9 cut(s)	56, 67, 337, 412, 427, 484, 517, 1049, 1362
AflII	CTTAAG	1 cut(s)	1256
AgsI	TTSAA	6 cut(s)	571, 652, 925, 970, 1022, 1199
AjiI	CACGTC	2 cut(s)	64, 319
AjnI	CCWGG	2 cut(s)	66, 420
AjuI	GAANNNNNNNTTGG	2 cut(s)	254, 286
AluBI	AGCT	8 cut(s)	211, 301, 385, 433, 451, 773, 1048, 1060
AluI	AGCT	8 cut(s)	211, 301, 385, 433, 451, 773, 1048, 1060
Alw21I	GWGCWC	3 cut(s)	213, 387, 435
Alw26I	GTCTC	3 cut(s)	24, 251, 1072
AlwI	GGATC	5 cut(s)	35, 470, 710, 770, 1340
Ama87I	CYCGRG	1 cut(s)	656
ApeKI	GCWGC	3 cut(s)	15, 265, 794
ApoI	RAATTY	1 cut(s)	580
Asp700I	GAANNNNTTC	1 cut(s)	887
Asp718I	GGTACC	1 cut(s)	1052
AspLEI	GCGC	2 cut(s)	395, 440
AspS9I	GGNCC	6 cut(s)	70, 340, 403, 475, 1036, 1177
AsuHPI	GGTGA	4 cut(s)	226, 352, 532, 1286
AvaI	CYCGRG	1 cut(s)	656
AvaII	GGWCC	4 cut(s)	70, 340, 403, 1177
BanI	GGYRCC	1 cut(s)	1052
BanII	GRGCYC	3 cut(s)	213, 387, 435
BauI	CACGAG	1 cut(s)	242
Bbv12I	GWGCWC	3 cut(s)	213, 387, 435
BbvI	GCAGC	3 cut(s)	27, 277, 806
BccI	CCATC	8 cut(s)	155, 293, 511, 827, 1081, 1100, 1228, 1319
BceAI	ACGGC	4 cut(s)	73, 318, 495, 803
BcgI	CGANNNNNNTGC	4 cut(s)	268, 302, 361, 395
BciT130I	CCWGG	2 cut(s)	68, 422
BclI	TGATCA	1 cut(s)	303
BcoDI	GTCTC	3 cut(s)	24, 251, 1072
BfaI	CTAG	1 cut(s)	876
BfmI	CTRYAG	1 cut(s)	13
BfrI	CTTAAG	1 cut(s)	1256
BglI	GCCNNNNNGGC	1 cut(s)	228
BglII	AGATCT	1 cut(s)	748
Bme1390I	CCNGG	2 cut(s)	68, 422
Bme18I	GGWCC	4 cut(s)	70, 340, 403, 1177
BmeT110I	CYCGRG	1 cut(s)	656
BmgBI	CACGTC	2 cut(s)	64, 319
BmgT120I	GGNCC	6 cut(s)	70, 340, 403, 475, 1036, 1177
BmiI	GGNNCC	1 cut(s)	1054
BmrFI	CCNGG	2 cut(s)	68, 422
BmsI	GCATC	4 cut(s)	670, 813, 829, 851
BpuEI	CTTGAG	3 cut(s)	371, 602, 893
BsaHI	GRCGYC	3 cut(s)	180, 231, 327
BsaI	GGTCTC	1 cut(s)	251
BsaJI	CCNNGG	6 cut(s)	160, 171, 217, 471, 719, 818
BsaXI	ACNNNNNCTCC	2 cut(s)	170, 200
Bsc4I	CCNNNNNNNGG	9 cut(s)	56, 67, 337, 412, 427, 484, 517, 1049, 1362
Bse118I	RCCGGY	2 cut(s)	362, 440
Bse3DI	GCAATG	2 cut(s)	903, 1117
BseBI	CCWGG	2 cut(s)	68, 422
BseDI	CCNNGG	6 cut(s)	160, 171, 217, 471, 719, 818
BseGI	GGATG	4 cut(s)	607, 808, 814, 828
BseLI	CCNNNNNNNGG	9 cut(s)	56, 67, 337, 412, 427, 484, 517, 1049, 1362
BseMI	GCAATG	2 cut(s)	903, 1117
BseMII	CTCAG	2 cut(s)	1056, 1368
BseX3I	CGGCCG	3 cut(s)	151, 202, 214
BseXI	GCAGC	3 cut(s)	27, 277, 806
BseYI	CCCAGC	1 cut(s)	1048
Bsh1236I	CGCG	4 cut(s)	156, 207, 219, 395
Bsh1285I	CGRYCG	3 cut(s)	154, 205, 217
BshNI	GGYRCC	1 cut(s)	1052
BsiEI	CGRYCG	3 cut(s)	154, 205, 217
BsiHKAI	GWGCWC	3 cut(s)	213, 387, 435
BsiHKCI	CYCGRG	1 cut(s)	656
BsiSI	CCGG	4 cut(s)	27, 363, 441, 575
BsiWI	CGTACG	1 cut(s)	396
BslFI	GGGAC	1 cut(s)	578
BslI	CCNNNNNNNGG	9 cut(s)	56, 67, 337, 412, 427, 484, 517, 1049, 1362
BsmAI	GTCTC	3 cut(s)	24, 251, 1072
BsmBI	CGTCTC	1 cut(s)	24
BsmFI	GGGAC	1 cut(s)	578
Bso31I	GGTCTC	1 cut(s)	251
BsoBI	CYCGRG	1 cut(s)	656
Bsp1286I	GDGCHC	3 cut(s)	213, 387, 435
Bsp143I	GATC	8 cut(s)	40, 303, 345, 462, 715, 748, 775, 1332
Bsp19I	CCATGG	2 cut(s)	171, 818
BspCNI	CTCAG	2 cut(s)	1057, 1369
BspFNI	CGCG	4 cut(s)	156, 207, 219, 395
BspLI	GGNNCC	1 cut(s)	1054
BspMAI	CTGCAG	1 cut(s)	17
BspPI	GGATC	5 cut(s)	35, 470, 710, 770, 1340
BspT107I	GGYRCC	1 cut(s)	1052
BspTI	CTTAAG	1 cut(s)	1256
BspTNI	GGTCTC	1 cut(s)	251
BsrBI	CCGCTC	4 cut(s)	186, 490, 616, 1221
BsrDI	GCAATG	2 cut(s)	903, 1117
BsrFI	RCCGGY	2 cut(s)	362, 440
BssAI	RCCGGY	2 cut(s)	362, 440
BssECI	CCNNGG	6 cut(s)	160, 171, 217, 471, 719, 818
BssMI	GATC	8 cut(s)	40, 303, 345, 462, 715, 748, 775, 1332
BssNI	GRCGYC	3 cut(s)	180, 231, 327
BssSI	CACGAG	1 cut(s)	242
BssT1I	CCWWGG	4 cut(s)	171, 471, 719, 818
Bst2BI	CACGAG	1 cut(s)	242
Bst2UI	CCWGG	2 cut(s)	68, 422
Bst4CI	ACNGT	5 cut(s)	526, 539, 888, 1004, 1083
Bst6I	CTCTTC	2 cut(s)	945, 1017
BstACI	GRCGYC	3 cut(s)	180, 231, 327
BstAFI	CTTAAG	1 cut(s)	1256
BstC8I	GCNNGC	9 cut(s)	167, 209, 277, 442, 449, 492, 792, 1036, 1251
BstDEI	CTNAG	2 cut(s)	1065, 1377
BstDSI	CCRYGG	3 cut(s)	171, 217, 818
BstEII	GGTNACC	1 cut(s)	520
BstF5I	GGATG	4 cut(s)	607, 808, 814, 828
BstFNI	CGCG	4 cut(s)	156, 207, 219, 395
BstHHI	GCGC	2 cut(s)	395, 440
BstKTI	GATC	8 cut(s)	43, 306, 348, 465, 718, 751, 778, 1335
BstMAI	GTCTC	3 cut(s)	24, 251, 1072
BstMBI	GATC	8 cut(s)	40, 303, 345, 462, 715, 748, 775, 1332
BstMCI	CGRYCG	3 cut(s)	154, 205, 217
BstMWI	GCNNNNNNNGC	7 cut(s)	12, 15, 32, 162, 213, 228, 444
BstNI	CCWGG	2 cut(s)	68, 422
BstPI	GGTNACC	1 cut(s)	520
BstSCI	CCNGG	2 cut(s)	66, 420
BstSFI	CTRYAG	1 cut(s)	13
BstUI	CGCG	4 cut(s)	156, 207, 219, 395
BstV1I	GCAGC	3 cut(s)	27, 277, 806
BstX2I	RGATCY	1 cut(s)	748
BstYI	RGATCY	1 cut(s)	748
BstZI	CGGCCG	3 cut(s)	151, 202, 214
BtgI	CCRYGG	3 cut(s)	171, 217, 818
BtgZI	GCGATG	4 cut(s)	271, 451, 852, 1285
BtrI	CACGTC	2 cut(s)	64, 319
BtsCI	GGATG	4 cut(s)	607, 808, 814, 828
BtsI	GCAGTG	2 cut(s)	745, 804
BtsIMutI	CAGTG	3 cut(s)	745, 804, 1009
Cac8I	GCNNGC	9 cut(s)	167, 209, 277, 442, 449, 492, 792, 1036, 1251
CfoI	GCGC	2 cut(s)	395, 440
Cfr10I	RCCGGY	2 cut(s)	362, 440
Cfr13I	GGNCC	6 cut(s)	70, 340, 403, 475, 1036, 1177
Cfr42I	CCGCGG	1 cut(s)	220
CseI	GACGC	3 cut(s)	41, 145, 220
CsiI	ACCWGGT	1 cut(s)	420
Csp6I	GTAC	3 cut(s)	397, 1053, 1225
CviAII	CATG	6 cut(s)	172, 349, 427, 819, 1156, 1357
CviQI	GTAC	3 cut(s)	397, 1053, 1225
DdeI	CTNAG	2 cut(s)	1065, 1377
DpnI	GATC	8 cut(s)	42, 305, 347, 464, 717, 750, 777, 1334
DpnII	GATC	8 cut(s)	40, 303, 345, 462, 715, 748, 775, 1332
DraI	TTTAAA	1 cut(s)	982
EaeI	YGGCCR	6 cut(s)	58, 151, 202, 214, 220, 364
EagI	CGGCCG	3 cut(s)	151, 202, 214
Eam1104I	CTCTTC	2 cut(s)	945, 1017
EarI	CTCTTC	2 cut(s)	945, 1017
EciI	GGCGGA	1 cut(s)	320
Ecl136II	GAGCTC	3 cut(s)	211, 385, 433
EclXI	CGGCCG	3 cut(s)	151, 202, 214
Eco130I	CCWWGG	4 cut(s)	171, 471, 719, 818
Eco24I	GRGCYC	3 cut(s)	213, 387, 435
Eco31I	GGTCTC	1 cut(s)	251
Eco47I	GGWCC	4 cut(s)	70, 340, 403, 1177
Eco52I	CGGCCG	3 cut(s)	151, 202, 214
Eco53kI	GAGCTC	3 cut(s)	211, 385, 433
Eco57I	CTGAAG	2 cut(s)	969, 1092
Eco88I	CYCGRG	1 cut(s)	656
Eco91I	GGTNACC	1 cut(s)	520
EcoICRI	GAGCTC	3 cut(s)	211, 385, 433
EcoO109I	RGGNCCY	1 cut(s)	70
EcoO65I	GGTNACC	1 cut(s)	520
EcoRII	CCWGG	2 cut(s)	66, 420
EcoT14I	CCWWGG	4 cut(s)	171, 471, 719, 818
EcoT22I	ATGCAT	1 cut(s)	844
EcoT38I	GRGCYC	3 cut(s)	213, 387, 435
ErhI	CCWWGG	4 cut(s)	171, 471, 719, 818
Esp3I	CGTCTC	1 cut(s)	24
FaeI	CATG	6 cut(s)	175, 352, 430, 822, 1159, 1360
FalI	AAGNNNNNCTT	2 cut(s)	1023, 1055
FaqI	GGGAC	1 cut(s)	578
FatI	CATG	6 cut(s)	171, 348, 426, 818, 1155, 1356
FauI	CCCGC	6 cut(s)	53, 109, 114, 483, 1027, 1214
FbaI	TGATCA	1 cut(s)	303
FokI	GGATG	4 cut(s)	614, 801, 815, 835
FriOI	GRGCYC	3 cut(s)	213, 387, 435
FspBI	CTAG	1 cut(s)	876
GlaI	GCGC	2 cut(s)	394, 439
GsaI	CCCAGC	1 cut(s)	1052
HapII	CCGG	4 cut(s)	27, 363, 441, 575
HgaI	GACGC	3 cut(s)	41, 145, 220
HhaI	GCGC	2 cut(s)	395, 440
Hin1I	GRCGYC	3 cut(s)	180, 231, 327
Hin1II	CATG	6 cut(s)	175, 352, 430, 822, 1159, 1360
Hin6I	GCGC	2 cut(s)	393, 438
HinP1I	GCGC	2 cut(s)	393, 438
HincII	GTYRAC	2 cut(s)	418, 1312
HindII	GTYRAC	2 cut(s)	418, 1312
HindIII	AAGCTT	1 cut(s)	1058
HinfI	GANTC	5 cut(s)	247, 502, 608, 636, 1067
HpaII	CCGG	4 cut(s)	27, 363, 441, 575
HphI	GGTGA	4 cut(s)	226, 352, 532, 1286
Hpy166II	GTNNAC	2 cut(s)	418, 1312
Hpy188I	TCNGA	9 cut(s)	297, 487, 516, 635, 715, 847, 949, 1066, 1072
Hpy188III	TCNNGA	8 cut(s)	38, 244, 343, 857, 876, 910, 1231, 1376
Hpy8I	GTNNAC	2 cut(s)	418, 1312
Hpy99I	CGWCG	4 cut(s)	317, 320, 383, 530
HpyAV	CCTTC	6 cut(s)	208, 735, 919, 964, 1049, 1323
HpyCH4III	ACNGT	5 cut(s)	526, 539, 888, 1004, 1083
HpyCH4IV	ACGT	4 cut(s)	63, 180, 318, 327
HpyCH4V	TGCA	9 cut(s)	15, 279, 352, 532, 794, 842, 920, 935, 1153
HpyF10VI	GCNNNNNNNGC	7 cut(s)	12, 15, 32, 162, 213, 228, 444
HpyF3I	CTNAG	2 cut(s)	1065, 1377
HpySE526I	ACGT	4 cut(s)	63, 180, 318, 327
Hsp92I	GRCGYC	3 cut(s)	180, 231, 327
Hsp92II	CATG	6 cut(s)	175, 352, 430, 822, 1159, 1360
HspAI	GCGC	2 cut(s)	393, 438
KpnI	GGTACC	1 cut(s)	1056
KroI	GCCGGC	1 cut(s)	440
KroNI	GCCGGC	1 cut(s)	442
Ksp22I	TGATCA	1 cut(s)	303
KspI	CCGCGG	1 cut(s)	220
Kzo9I	GATC	8 cut(s)	40, 303, 345, 462, 715, 748, 775, 1332
LmnI	GCTCC	5 cut(s)	40, 191, 430, 487, 1246
Lsp1109I	GCAGC	3 cut(s)	27, 277, 806
LweI	GCATC	4 cut(s)	670, 813, 829, 851
MabI	ACCWGGT	1 cut(s)	420
MaeI	CTAG	1 cut(s)	876
MaeII	ACGT	4 cut(s)	63, 180, 318, 327
MaeIII	GTNAC	6 cut(s)	232, 244, 520, 539, 695, 1384
MalI	GATC	8 cut(s)	42, 305, 347, 464, 717, 750, 777, 1334
MbiI	CCGCTC	4 cut(s)	186, 490, 616, 1221
MboI	GATC	8 cut(s)	40, 303, 345, 462, 715, 748, 775, 1332
MboII	GAAGA	8 cut(s)	640, 680, 769, 842, 962, 1034, 1250, 1407
MfeI	CAATTG	1 cut(s)	1119
MflI	RGATCY	1 cut(s)	748
MhlI	GDGCHC	3 cut(s)	213, 387, 435
MluCI	AATT	6 cut(s)	224, 580, 930, 1011, 1119, 1241
MlyI	GAGTC	4 cut(s)	241, 602, 630, 1076
MmeI	TCCRAC	1 cut(s)	78
Mph1103I	ATGCAT	1 cut(s)	844
MreI	CGCCGGCG	1 cut(s)	440
MroNI	GCCGGC	1 cut(s)	440
MroXI	GAANNNNTTC	1 cut(s)	887
MseI	TTAA	5 cut(s)	810, 981, 1028, 1257, 1290
MslI	CAYNNNNRTG	1 cut(s)	1232
MspA1I	CMGCKG	1 cut(s)	219
MspCI	CTTAAG	1 cut(s)	1256
MspI	CCGG	4 cut(s)	27, 363, 441, 575
MspR9I	CCNGG	2 cut(s)	68, 422
MunI	CAATTG	1 cut(s)	1119
MvaI	CCWGG	2 cut(s)	68, 422
MvnI	CGCG	4 cut(s)	156, 207, 219, 395
MwoI	GCNNNNNNNGC	7 cut(s)	12, 15, 32, 162, 213, 228, 444
NaeI	GCCGGC	1 cut(s)	442
NcoI	CCATGG	2 cut(s)	171, 818
NdeII	GATC	8 cut(s)	40, 303, 345, 462, 715, 748, 775, 1332
NgoMIV	GCCGGC	1 cut(s)	440
NlaIII	CATG	6 cut(s)	175, 352, 430, 822, 1159, 1360
NlaIV	GGNNCC	1 cut(s)	1054
NmeAIII	GCCGAG	2 cut(s)	141, 192
NmuCI	GTSAC	6 cut(s)	232, 244, 520, 539, 695, 1384
NsiI	ATGCAT	1 cut(s)	844
PcsI	WCGNNNNNNNCGW	2 cut(s)	324, 639
PdiI	GCCGGC	1 cut(s)	442
PdmI	GAANNNNTTC	1 cut(s)	887
PfeI	GAWTC	1 cut(s)	502
Pfl23II	CGTACG	1 cut(s)	396
PleI	GAGTC	4 cut(s)	241, 602, 630, 1075
PpsI	GAGTC	4 cut(s)	241, 602, 630, 1075
PpuMI	RGGWCCY	1 cut(s)	70
PsiI	TTATAA	1 cut(s)	1139
Psp124BI	GAGCTC	3 cut(s)	213, 387, 435
Psp5II	RGGWCCY	1 cut(s)	70
Psp6I	CCWGG	2 cut(s)	66, 420
PspEI	GGTNACC	1 cut(s)	520
PspFI	CCCAGC	1 cut(s)	1048
PspGI	CCWGG	2 cut(s)	66, 420
PspLI	CGTACG	1 cut(s)	396
PspN4I	GGNNCC	1 cut(s)	1054
PspPI	GGNCC	6 cut(s)	70, 340, 403, 475, 1036, 1177
PspPPI	RGGWCCY	1 cut(s)	70
PstI	CTGCAG	1 cut(s)	17
PsuI	RGATCY	1 cut(s)	748
RsaI	GTAC	3 cut(s)	398, 1054, 1226
RsaNI	GTAC	3 cut(s)	397, 1053, 1225
RseI	CAYNNNNRTG	1 cut(s)	1232
SacI	GAGCTC	3 cut(s)	213, 387, 435
SacII	CCGCGG	1 cut(s)	220
SaqAI	TTAA	5 cut(s)	810, 981, 1028, 1257, 1290
Sau3AI	GATC	8 cut(s)	40, 303, 345, 462, 715, 748, 775, 1332
Sau96I	GGNCC	6 cut(s)	70, 340, 403, 475, 1036, 1177
SchI	GAGTC	4 cut(s)	241, 602, 630, 1076
ScrFI	CCNGG	2 cut(s)	68, 422
SduI	GDGCHC	3 cut(s)	213, 387, 435
SexAI	ACCWGGT	1 cut(s)	420
SfaNI	GCATC	4 cut(s)	670, 813, 829, 851
SfcI	CTRYAG	1 cut(s)	13
Sfr303I	CCGCGG	1 cut(s)	220
SgrAI	CRCCGGYG	1 cut(s)	440
SgrBI	CCGCGG	1 cut(s)	220
SinI	GGWCC	4 cut(s)	70, 340, 403, 1177
SmiMI	CAYNNNNRTG	1 cut(s)	1232
SmlI	CTYRAG	4 cut(s)	386, 617, 908, 1256
SmoI	CTYRAG	4 cut(s)	386, 617, 908, 1256
Sse9I	AATT	6 cut(s)	224, 580, 930, 1011, 1119, 1241
SspI	AATATT	1 cut(s)	1202
SspMI	CTAG	1 cut(s)	876
SstI	GAGCTC	3 cut(s)	213, 387, 435
StyD4I	CCNGG	2 cut(s)	66, 420
StyI	CCWWGG	4 cut(s)	171, 471, 719, 818
TaaI	ACNGT	5 cut(s)	526, 539, 888, 1004, 1083
TaiI	ACGT	4 cut(s)	66, 183, 321, 330
TaqI	TCGA	4 cut(s)	381, 456, 769, 1206
TaqII	GACCGA	1 cut(s)	403
TasI	AATT	6 cut(s)	224, 580, 930, 1011, 1119, 1241
TfiI	GAWTC	1 cut(s)	502
Tru1I	TTAA	5 cut(s)	810, 981, 1028, 1257, 1290
Tru9I	TTAA	5 cut(s)	810, 981, 1028, 1257, 1290
TscAI	CASTG	3 cut(s)	745, 804, 1009
TseFI	GTSAC	6 cut(s)	232, 244, 520, 539, 695, 1384
TseI	GCWGC	3 cut(s)	15, 265, 794
Tsp45I	GTSAC	6 cut(s)	232, 244, 520, 539, 695, 1384
TspDTI	ATGAA	5 cut(s)	678, 896, 914, 1172, 1293
TspGWI	ACGGA	1 cut(s)	631
TspRI	CASTG	3 cut(s)	745, 804, 1009
Vha464I	CTTAAG	1 cut(s)	1256
VpaK11BI	GGWCC	4 cut(s)	70, 340, 403, 1177
XapI	RAATTY	1 cut(s)	580
XbaI	TCTAGA	1 cut(s)	875
XmnI	GAANNNNTTC	1 cut(s)	887
XspI	CTAG	1 cut(s)	876
ZraI	GACGTC	2 cut(s)	181, 328
Zsp2I	ATGCAT	1 cut(s)	844

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.