Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb5

Orthogroup ID

OG0005568

Physical Location & Seq

Genomic Coordinates Reverse (-)

2658098 .. 2664301

Gene Structure 6204 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_5g04520.t3

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2001 bp

ATGGCGGGGACTAAGTACAAGTACCTGATCGAGGTCGAGAAGGGGAAACCGGCCAAGGACGGCAGGCCGTCGCTCGGTCCGGTTTACCGGAGCGTCTTCGCTAAAGACGGATTTCCGCCGCCGATTGCCGGAATGGACAGCTGCTGGGACGTTTTCCGCATGTCGGTGGAGAAGAATCCCGGGAACCGAATGCTTGGTCGTCGCGAGACTGTGAATGGGAAGGCTGGTGAATATGTGTGGTTAACTTACAAACAAGTATATGACATTGTGGTAAAAGTTGGAAATTCCATGCGCACTCTTGGCTTGGTAGAAGGGGACAAATGTGGTATATTTGGTGCCAATTGCCCAGAATGGATAATGAGCATGGAGGCTTGCAATGCTCATGGGCTCTATTGTGTTCCTTTATATGACACTCTAGGTGCTGGTGCTGTGGAGTTTATCATATGCCATGCTGAAGTTTCACTTGCTTTTGTAGAAGAAAAAAAGATACCTGAGCTGTTGAAGACACTTCCCAACGCGTCAAAATATCTAAAGACACTTGTAAGCTTTGGCAATGTTACTCCTGAACAAAAGGAATCAGTTGAAAAGCATGGATCTGTCTTATATTCATGGAATGAATTTCTGCAACTGGGAGAGAGTAAAGATTTTGATCTTCCAGTAAAAAAGAAAAGTGATATCTGTACTATAATGTATACTAGTGGAACAACTGGTGACCCCAAGGGTGTACTGATATCCAATGAAAGCATCATCACTCTACTGGCTGGGGTGAAACGCCTGCTGGAGAGTGTAAATGAAGAGTTGGACACGAACGATGTATATCTTTCCTTTCTTCCTCTTGCACATATCTTTGATCGGGTTATCGAGGAGTTATTTATCTGGACTGGTGCCTCAATAGGGTTCTGGCGTGGGGATGTCAAATTATTAACTGAAGACATAGCAGAGCTAAAACCAACTATTTTTTGTGCTGTTCCTCGCGTCTTAGATAGAATCTATGCAGGCTTGACACAGAGGATTTCATCAGGCGGCATCATAAAAAAGACGCTGTTCAATTGTGCGTATACATACAAGCATTATAACATGAAAAATGGGCATGCACATGGGGATGCATCTCCAATGTCTGACAAGATTGTGTTTAGTAAGGTAAAGCAAGGATTGGGGGGTAGGGTGCGGCTCATTCTGTCTGGAGCTGCTCCTCTTTCTACTCATGTGGAATCTTACTTACGTGTGGTCGCATGCGCTCATGTTTTACAAGGATATGGTCTGACAGAAACTTGTGCTGGGACTTTCGTATCACTACCAAATGAAATGTCCATGCTTGGCACAGTTGGTCCTCCGGTTCCAAATGTGGATGTATGTCTAGAATCTGTACCTGAAATGGGATATGACGCTCTGGCTGAGACAGCTCGTGGAGAAGTATGTGTAAGAGGAAAAACTTTGTTTTCAGGATACTACAAACGCGAGGACCTCACGAAAGAGGTCATGATTGATGGGTGGTTCCATACAGGGGATATTGGTGAGTGGCAACAAGATGGAAGCCTCAAAATCATTGATCGTAAGAAGAATATCTTCAAGCTTTCACAAGGAGAGTATGTAGCAGTTGAAAACTTGGAAAATATTTATGGACTTGTTTCAGATATTGATGCGATATGGGTTTATGGGAACAGCTTTGAGTCCTGCCTGGTTGCAGTTGTCAACCCCAACAAGCAAGCAATTGAACGTTGGGCTCAACAAAATGATGTATCTGGTGACTTCAATTCTCTTTGTGAAAATGCAAAGGTGAAAGAATACGTGCTTGGAGAGCTGAATAAGATTGCGAAAGACAAAAAGTTGAAAGGTTTTGAGGTTATAAAAGCTGTTCACCTTGACCCAGAACCATTCGACATGGAGCGCGACCTTATCACTCCAACATACAAGAAAAAGAGGCCCCAGTTGCTTAAATACTACAAGAGTGTGATTGATGACATGTACAAGAGTGTAAACCAACCCAAGCCTAAGGCCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001676 GO:0003674 GO:0003824 GO:0004467 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005794 GO:0005886 GO:0006082 GO:0006629 GO:0006631 GO:0008150 GO:0008152 GO:0009987 GO:0012505 GO:0015645 GO:0016020 GO:0016405 GO:0016874 GO:0016877 GO:0016878 GO:0019752 GO:0032787 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044237 GO:0044238 GO:0044255 GO:0044281 GO:0044424 GO:0044444 GO:0044464 GO:0071704 GO:0071944

KEGG Pathways

Metabolic & Signaling

ko00061 ko00071 ko01100 ko01212 ko02024 ko03320 ko04146 ko04216 ko04714 ko04920 map00061 map00071 map01100 map01212 map02024 map03320 map04146 map04216 map04714 map04920

Pfam Domains

Protein Families

AMP-binding

Protein Analysis

667

Amino Acids

74.13

Weight (kDa)

6.47

Isoelectric Point (pI)

33.71

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
AMP-binding	PF00501	67 - 484	2.5e-80	AMP-binding enzyme

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0005568)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G64400 AT4G11030 AT4G23850
fragaria_vesca	FvH4_5g04520 FvH4_5g04520 FvH4_5g04520
malus_domestica	MD02G1279200.v1.1 MD06G1106100.v1.1 MD14G1128200.v1.1
prunus_persica	Prupe.5G118400_v2.0.a1 Prupe.5G118400_v2.0.a1
pyrus_communis	pycom06g10040
rosa_chinensis	RchiOBHm_Chr7g0179891 RchiOBHm_Chr7g0194931
rosa_laevigata	RLG00000004156
rosa_multiflora	Rmu_sc0008218.1_g000002 Rmu_sc0010214.1_g000001 Rmu_ssc0000157.1_g000004
rosa_roxburghii	Rroxscaffold_3G00260880
rosa_rugosa	Rorug04G0299500 Rorug07G0019100 Rorug07G0019200
rosa_samantha	Rh1DG084200 Rh7AG146900 Rh7BG147600 Rh7CG151000 Rh7DG148100
rosa_wichuraiana	Rw7G012540

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	1074, 1847
Acc16I	TGCGCA	1 cut(s)	293
AccB1I	GGYRCC	2 cut(s)	335, 884
AccI	GTMKAC	2 cut(s)	692, 1058
AccII	CGCG	5 cut(s)	204, 518, 975, 1458, 1890
AciI	CCGC	6 cut(s)	5, 116, 119, 157, 1023, 1168
AclI	AACGTT	1 cut(s)	1717
AclWI	GGATC	1 cut(s)	601
AcoI	YGGCCR	1 cut(s)	51
AcsI	RAATTY	2 cut(s)	283, 617
AcuI	CTGAAG	2 cut(s)	474, 948
AfaI	GTAC	6 cut(s)	17, 23, 682, 726, 1368, 1967
AfiI	CCNNNNNNNGG	7 cut(s)	31, 74, 128, 163, 894, 1376, 1504
AflIII	ACRYGT	3 cut(s)	516, 1222, 1962
AgsI	TTSAA	8 cut(s)	502, 584, 1048, 1570, 1601, 1715, 1753, 1831
AhlI	ACTAGT	1 cut(s)	695
AjnI	CCWGG	1 cut(s)	1677
AjuI	GAANNNNNNNTTGG	2 cut(s)	1776, 1808
Alw26I	GTCTC	2 cut(s)	200, 1391
AlwI	GGATC	1 cut(s)	601
AlwNI	CAGNNNCTG	1 cut(s)	144
Ama87I	CYCGRG	1 cut(s)	179
AoxI	GGCC	4 cut(s)	51, 65, 1922, 1995
ApeKI	GCWGC	2 cut(s)	141, 1187
ApoI	RAATTY	2 cut(s)	283, 617
ArsI	GACNNNNNNTTYG	4 cut(s)	181, 213, 1292, 1324
Asp700I	GAANNNNTTC	1 cut(s)	1565
AspLEI	GCGC	3 cut(s)	294, 1238, 1890
AspS9I	GGNCC	4 cut(s)	77, 1328, 1462, 1923
AsuC2I	CCSGG	2 cut(s)	180, 181
AsuHPI	GGTGA	7 cut(s)	239, 722, 778, 1526, 1757, 1789, 1850
AvaI	CYCGRG	1 cut(s)	179
AvaII	GGWCC	3 cut(s)	77, 1328, 1462
AxyI	CCTNAGG	1 cut(s)	1992
BaeI	ACNNNNGTAYC	2 cut(s)	1272, 1305
BanI	GGYRCC	2 cut(s)	335, 884
BanII	GRGCYC	2 cut(s)	390, 1726
BauI	CACGAG	1 cut(s)	1404
BbsI	GAAGAC	3 cut(s)	88, 509, 936
BbvI	GCAGC	2 cut(s)	128, 1174
BccI	CCATC	2 cut(s)	1481, 1523
BceAI	ACGGC	2 cut(s)	52, 76
BciT130I	CCWGG	1 cut(s)	1679
BciVI	GTATCC	1 cut(s)	1439
BcnI	CCSGG	2 cut(s)	180, 181
BcoDI	GTCTC	2 cut(s)	200, 1391
BcuI	ACTAGT	1 cut(s)	695
BfaI	CTAG	3 cut(s)	416, 696, 1358
BfuI	GTATCC	1 cut(s)	1439
BisI	GCNGC	5 cut(s)	119, 142, 1024, 1169, 1188
BlsI	GCNGC	5 cut(s)	120, 143, 1025, 1170, 1189
Bme1390I	CCNGG	3 cut(s)	180, 181, 1679
Bme18I	GGWCC	3 cut(s)	77, 1328, 1462
BmeT110I	CYCGRG	1 cut(s)	179
BmgT120I	GGNCC	4 cut(s)	77, 1328, 1462, 1923
BmiI	GGNNCC	6 cut(s)	185, 337, 886, 1338, 1496, 1925
BmrFI	CCNGG	3 cut(s)	180, 181, 1679
BmrI	ACTGGG	2 cut(s)	638, 1921
BmsI	GCATC	5 cut(s)	753, 1035, 1093, 1115, 1630
BmuI	ACTGGG	2 cut(s)	638, 1921
BpiI	GAAGAC	3 cut(s)	88, 509, 936
BpmI	CTGGAG	2 cut(s)	800, 1203
Bpu10I	CCTNAGC	1 cut(s)	492
BpuMI	CCSGG	2 cut(s)	180, 181
BsaAI	YACGTR	2 cut(s)	1223, 1789
BsaBI	GATNNNNATC	2 cut(s)	648, 816
BsaJI	CCNNGG	3 cut(s)	54, 179, 717
BsaWI	WCCGGW	3 cut(s)	79, 87, 1333
BsaXI	ACNNNNNCTCC	2 cut(s)	1575, 1605
Bsc4I	CCNNNNNNNGG	7 cut(s)	31, 74, 128, 163, 894, 1376, 1504
Bse118I	RCCGGY	1 cut(s)	49
Bse1I	ACTGG	6 cut(s)	633, 656, 712, 762, 886, 1927
Bse21I	CCTNAGG	1 cut(s)	1992
Bse3DI	GCAATG	2 cut(s)	382, 559
Bse8I	GATNNNNATC	2 cut(s)	648, 816
BseBI	CCWGG	1 cut(s)	1679
BseDI	CCNNGG	3 cut(s)	54, 179, 717
BseGI	GGATG	3 cut(s)	916, 1108, 1354
BseJI	GATNNNNATC	2 cut(s)	648, 816
BseLI	CCNNNNNNNGG	7 cut(s)	31, 74, 128, 163, 894, 1376, 1504
BseMI	GCAATG	2 cut(s)	382, 559
BseMII	CTCAG	2 cut(s)	483, 1386
BseNI	ACTGG	6 cut(s)	633, 656, 712, 762, 886, 1927
BseRI	GAGGAG	2 cut(s)	878, 1182
BseXI	GCAGC	2 cut(s)	128, 1174
BseYI	CCCAGC	3 cut(s)	144, 761, 1277
Bsh1236I	CGCG	5 cut(s)	204, 518, 975, 1458, 1890
BshFI	GGCC	4 cut(s)	53, 67, 1924, 1997
BshNI	GGYRCC	2 cut(s)	335, 884
BsiHKCI	CYCGRG	1 cut(s)	179
BsiSI	CCGG	6 cut(s)	50, 80, 88, 129, 180, 1334
BslFI	GGGAC	4 cut(s)	22, 161, 329, 1294
BslI	CCNNNNNNNGG	7 cut(s)	31, 74, 128, 163, 894, 1376, 1504
BsmAI	GTCTC	2 cut(s)	200, 1391
BsmFI	GGGAC	4 cut(s)	22, 161, 329, 1294
BsmI	GAATGC	1 cut(s)	195
BsnI	GGCC	4 cut(s)	53, 67, 1924, 1997
BsoBI	CYCGRG	1 cut(s)	179
Bsp1286I	GDGCHC	2 cut(s)	390, 1726
Bsp1407I	TGTACA	1 cut(s)	1965
Bsp143I	GATC	5 cut(s)	27, 593, 649, 850, 1549
Bsp68I	TCGCGA	1 cut(s)	204
BspACI	CCGC	6 cut(s)	5, 116, 119, 157, 1023, 1168
BspANI	GGCC	4 cut(s)	53, 67, 1924, 1997
BspCNI	CTCAG	2 cut(s)	484, 1387
BspFNI	CGCG	5 cut(s)	204, 518, 975, 1458, 1890
BspHI	TCATGA	1 cut(s)	1479
BspLI	GGNNCC	6 cut(s)	185, 337, 886, 1338, 1496, 1925
BspPI	GGATC	1 cut(s)	601
BspT107I	GGYRCC	2 cut(s)	335, 884
BsrDI	GCAATG	2 cut(s)	382, 559
BsrFI	RCCGGY	1 cut(s)	49
BsrGI	TGTACA	1 cut(s)	1965
BsrI	ACTGG	6 cut(s)	633, 656, 712, 762, 886, 1927
BssAI	RCCGGY	1 cut(s)	49
BssECI	CCNNGG	3 cut(s)	54, 179, 717
BssMI	GATC	5 cut(s)	27, 593, 649, 850, 1549
BssNAI	GTATAC	2 cut(s)	693, 1059
BssSI	CACGAG	1 cut(s)	1404
BssT1I	CCWWGG	2 cut(s)	54, 717
Bst1107I	GTATAC	2 cut(s)	693, 1059
Bst2BI	CACGAG	1 cut(s)	1404
Bst2UI	CCWGG	1 cut(s)	1679
Bst4CI	ACNGT	2 cut(s)	211, 1324
Bst6I	CTCTTC	1 cut(s)	789
BstAUI	TGTACA	1 cut(s)	1965
BstBAI	YACGTR	2 cut(s)	1223, 1789
BstC8I	GCNNGC	7 cut(s)	65, 373, 776, 997, 1092, 1234, 1707
BstDEI	CTNAG	5 cut(s)	12, 492, 979, 1395, 1992
BstEII	GGTNACC	1 cut(s)	710
BstENI	CCTNNNNNAGG	1 cut(s)	29
BstF5I	GGATG	3 cut(s)	916, 1108, 1354
BstFNI	CGCG	5 cut(s)	204, 518, 975, 1458, 1890
BstHHI	GCGC	3 cut(s)	294, 1238, 1890
BstKTI	GATC	5 cut(s)	30, 596, 652, 853, 1552
BstMAI	GTCTC	2 cut(s)	200, 1391
BstMBI	GATC	5 cut(s)	27, 593, 649, 850, 1549
BstMWI	GCNNNNNNNGC	5 cut(s)	300, 377, 1400, 1798, 1930
BstNI	CCWGG	1 cut(s)	1679
BstNSI	RCATGY	4 cut(s)	163, 1094, 1236, 1966
BstPI	GGTNACC	1 cut(s)	710
BstSCI	CCNGG	3 cut(s)	178, 179, 1677
BstUI	CGCG	5 cut(s)	204, 518, 975, 1458, 1890
BstV1I	GCAGC	2 cut(s)	128, 1174
BstV2I	GAAGAC	3 cut(s)	88, 509, 936
BstX2I	RGATCY	1 cut(s)	593
BstYI	RGATCY	1 cut(s)	593
BstZ17I	GTATAC	2 cut(s)	693, 1059
Bsu36I	CCTNAGG	1 cut(s)	1992
BsuI	GTATCC	1 cut(s)	1439
BsuRI	GGCC	4 cut(s)	53, 67, 1924, 1997
BtsCI	GGATG	3 cut(s)	916, 1108, 1354
BtuMI	TCGCGA	1 cut(s)	204
Cac8I	GCNNGC	7 cut(s)	65, 373, 776, 997, 1092, 1234, 1707
CaiI	CAGNNNCTG	1 cut(s)	144
CciI	TCATGA	1 cut(s)	1479
CfoI	GCGC	3 cut(s)	294, 1238, 1890
Cfr10I	RCCGGY	1 cut(s)	49
Cfr13I	GGNCC	4 cut(s)	77, 1328, 1462, 1923
Cfr9I	CCCGGG	1 cut(s)	179
CpoI	CGGWCCG	1 cut(s)	77
CseI	GACGC	5 cut(s)	82, 507, 964, 1048, 1394
Csp6I	GTAC	6 cut(s)	16, 22, 681, 725, 1367, 1966
CspI	CGGWCCG	1 cut(s)	77
CviQI	GTAC	6 cut(s)	16, 22, 681, 725, 1367, 1966
DdeI	CTNAG	5 cut(s)	12, 492, 979, 1395, 1992
DpnI	GATC	5 cut(s)	29, 595, 651, 852, 1551
DpnII	GATC	5 cut(s)	27, 593, 649, 850, 1549
EaeI	YGGCCR	1 cut(s)	51
Eam1104I	CTCTTC	1 cut(s)	789
EarI	CTCTTC	1 cut(s)	789
EciI	GGCGGA	1 cut(s)	105
Eco130I	CCWWGG	2 cut(s)	54, 717
Eco147I	AGGCCT	1 cut(s)	1997
Eco24I	GRGCYC	2 cut(s)	390, 1726
Eco32I	GATATC	2 cut(s)	676, 732
Eco47I	GGWCC	3 cut(s)	77, 1328, 1462
Eco57I	CTGAAG	2 cut(s)	474, 948
Eco81I	CCTNAGG	1 cut(s)	1992
Eco88I	CYCGRG	1 cut(s)	179
Eco91I	GGTNACC	1 cut(s)	710
EcoNI	CCTNNNNNAGG	1 cut(s)	29
EcoO109I	RGGNCCY	2 cut(s)	1462, 1923
EcoO65I	GGTNACC	1 cut(s)	710
EcoRII	CCWGG	1 cut(s)	1677
EcoRV	GATATC	2 cut(s)	676, 732
EcoT14I	CCWWGG	2 cut(s)	54, 717
EcoT22I	ATGCAT	1 cut(s)	1108
EcoT38I	GRGCYC	2 cut(s)	390, 1726
ErhI	CCWWGG	2 cut(s)	54, 717
FalI	AAGNNNNNCTT	4 cut(s)	447, 479, 1550, 1582
FaqI	GGGAC	4 cut(s)	22, 161, 329, 1294
FauNDI	CATATG	1 cut(s)	443
FblI	GTMKAC	2 cut(s)	692, 1058
Fnu4HI	GCNGC	5 cut(s)	119, 142, 1024, 1169, 1188
FokI	GGATG	3 cut(s)	923, 1115, 1361
FriOI	GRGCYC	2 cut(s)	390, 1726
Fsp4HI	GCNGC	5 cut(s)	119, 142, 1024, 1169, 1188
FspAI	RTGCGCAY	1 cut(s)	293
FspBI	CTAG	3 cut(s)	416, 696, 1358
FspI	TGCGCA	1 cut(s)	293
GlaI	GCGC	3 cut(s)	293, 1237, 1889
GluI	GCNGC	5 cut(s)	119, 142, 1024, 1169, 1188
GsaI	CCCAGC	3 cut(s)	148, 765, 1281
GsuI	CTGGAG	2 cut(s)	800, 1203
HaeIII	GGCC	4 cut(s)	53, 67, 1924, 1997
HapII	CCGG	6 cut(s)	50, 80, 88, 129, 180, 1334
HgaI	GACGC	5 cut(s)	82, 507, 964, 1048, 1394
HhaI	GCGC	3 cut(s)	294, 1238, 1890
Hin6I	GCGC	3 cut(s)	292, 1236, 1888
HinP1I	GCGC	3 cut(s)	292, 1236, 1888
HincII	GTYRAC	2 cut(s)	243, 1693
HindII	GTYRAC	2 cut(s)	243, 1693
HindIII	AAGCTT	2 cut(s)	544, 1571
HinfI	GANTC	6 cut(s)	175, 575, 987, 1211, 1361, 1670
HpaI	GTTAAC	1 cut(s)	243
HpaII	CCGG	6 cut(s)	50, 80, 88, 129, 180, 1334
HphI	GGTGA	7 cut(s)	239, 722, 778, 1526, 1757, 1789, 1850
Hpy166II	GTNNAC	8 cut(s)	85, 243, 693, 725, 1059, 1693, 1858, 1978
Hpy188I	TCNGA	3 cut(s)	1120, 1263, 1633
Hpy188III	TCNNGA	9 cut(s)	37, 203, 563, 877, 1182, 1358, 1443, 1468, 1480
Hpy8I	GTNNAC	8 cut(s)	85, 243, 693, 725, 1059, 1693, 1858, 1978
Hpy99I	CGWCG	2 cut(s)	73, 204
HpyAV	CCTTC	3 cut(s)	34, 214, 305
HpyCH4III	ACNGT	2 cut(s)	211, 1324
HpyCH4IV	ACGT	4 cut(s)	150, 1222, 1717, 1788
HpyCH4V	TGCA	8 cut(s)	375, 625, 839, 995, 1094, 1106, 1685, 1772
HpyF10VI	GCNNNNNNNGC	5 cut(s)	300, 377, 1400, 1798, 1930
HpyF3I	CTNAG	5 cut(s)	12, 492, 979, 1395, 1992
HpySE526I	ACGT	4 cut(s)	150, 1222, 1717, 1788
HspAI	GCGC	3 cut(s)	292, 1236, 1888
KspAI	GTTAAC	1 cut(s)	243
Kzo9I	GATC	5 cut(s)	27, 593, 649, 850, 1549
LmnI	GCTCC	4 cut(s)	90, 1184, 1195, 1885
Lsp1109I	GCAGC	2 cut(s)	128, 1174
LweI	GCATC	5 cut(s)	753, 1035, 1093, 1115, 1630
MaeI	CTAG	3 cut(s)	416, 696, 1358
MaeII	ACGT	4 cut(s)	150, 1222, 1717, 1788
MaeIII	GTNAC	3 cut(s)	556, 710, 1745
MalI	GATC	5 cut(s)	29, 595, 651, 852, 1551
MboI	GATC	5 cut(s)	27, 593, 649, 850, 1549
MfeI	CAATTG	3 cut(s)	340, 1048, 1710
MflI	RGATCY	1 cut(s)	593
MhlI	GDGCHC	2 cut(s)	390, 1726
MluCI	AATT	7 cut(s)	283, 340, 617, 917, 1048, 1710, 1753
MluI	ACGCGT	1 cut(s)	516
MlyI	GAGTC	1 cut(s)	1679
MmeI	TCCRAC	3 cut(s)	259, 780, 1928
Mph1103I	ATGCAT	1 cut(s)	1108
MroXI	GAANNNNTTC	1 cut(s)	1565
MseI	TTAA	3 cut(s)	242, 923, 1935
MslI	CAYNNNNRTG	3 cut(s)	164, 1095, 1101
MspA1I	CMGCKG	1 cut(s)	141
MspI	CCGG	6 cut(s)	50, 80, 88, 129, 180, 1334
MspR9I	CCNGG	3 cut(s)	180, 181, 1679
MunI	CAATTG	3 cut(s)	340, 1048, 1710
Mva1269I	GAATGC	1 cut(s)	195
MvaI	CCWGG	1 cut(s)	1679
MvnI	CGCG	5 cut(s)	204, 518, 975, 1458, 1890
MwoI	GCNNNNNNNGC	5 cut(s)	300, 377, 1400, 1798, 1930
NciI	CCSGG	2 cut(s)	180, 181
NdeI	CATATG	1 cut(s)	443
NdeII	GATC	5 cut(s)	27, 593, 649, 850, 1549
NlaIV	GGNNCC	6 cut(s)	185, 337, 886, 1338, 1496, 1925
NmuCI	GTSAC	2 cut(s)	710, 1745
NruI	TCGCGA	1 cut(s)	204
NsbI	TGCGCA	1 cut(s)	293
NsiI	ATGCAT	1 cut(s)	1108
NspI	RCATGY	4 cut(s)	163, 1094, 1236, 1966
PaeI	GCATGC	2 cut(s)	1094, 1236
PagI	TCATGA	1 cut(s)	1479
PceI	AGGCCT	1 cut(s)	1997
PciI	ACATGT	1 cut(s)	1962
PctI	GAATGC	1 cut(s)	195
PdmI	GAANNNNTTC	1 cut(s)	1565
PfeI	GAWTC	5 cut(s)	175, 575, 987, 1211, 1361
PkrI	GCNGC	5 cut(s)	120, 143, 1025, 1170, 1189
PleI	GAGTC	1 cut(s)	1678
PpsI	GAGTC	1 cut(s)	1678
Ppu21I	YACGTR	2 cut(s)	1223, 1789
PpuMI	RGGWCCY	1 cut(s)	1462
PscI	ACATGT	1 cut(s)	1962
PsiI	TTATAA	2 cut(s)	1074, 1847
Psp1406I	AACGTT	1 cut(s)	1717
Psp5II	RGGWCCY	1 cut(s)	1462
Psp6I	CCWGG	1 cut(s)	1677
PspEI	GGTNACC	1 cut(s)	710
PspFI	CCCAGC	3 cut(s)	144, 761, 1277
PspGI	CCWGG	1 cut(s)	1677
PspN4I	GGNNCC	6 cut(s)	185, 337, 886, 1338, 1496, 1925
PspPI	GGNCC	4 cut(s)	77, 1328, 1462, 1923
PspPPI	RGGWCCY	1 cut(s)	1462
PstNI	CAGNNNCTG	1 cut(s)	144
PsuI	RGATCY	1 cut(s)	593
PvuII	CAGCTG	1 cut(s)	141
RruI	TCGCGA	1 cut(s)	204
RsaI	GTAC	6 cut(s)	17, 23, 682, 726, 1368, 1967
RsaNI	GTAC	6 cut(s)	16, 22, 681, 725, 1367, 1966
RseI	CAYNNNNRTG	3 cut(s)	164, 1095, 1101
Rsr2I	CGGWCCG	1 cut(s)	77
RsrII	CGGWCCG	1 cut(s)	77
SaqAI	TTAA	3 cut(s)	242, 923, 1935
SatI	GCNGC	5 cut(s)	119, 142, 1024, 1169, 1188
Sau3AI	GATC	5 cut(s)	27, 593, 649, 850, 1549
Sau96I	GGNCC	4 cut(s)	77, 1328, 1462, 1923
SchI	GAGTC	1 cut(s)	1679
ScrFI	CCNGG	3 cut(s)	180, 181, 1679
SduI	GDGCHC	2 cut(s)	390, 1726
SfaNI	GCATC	5 cut(s)	753, 1035, 1093, 1115, 1630
SinI	GGWCC	3 cut(s)	77, 1328, 1462
SmaI	CCCGGG	1 cut(s)	181
SmiMI	CAYNNNNRTG	3 cut(s)	164, 1095, 1101
SpeI	ACTAGT	1 cut(s)	695
SphI	GCATGC	2 cut(s)	1094, 1236
Sse9I	AATT	7 cut(s)	283, 340, 617, 917, 1048, 1710, 1753
SseBI	AGGCCT	1 cut(s)	1997
SsiI	CCGC	6 cut(s)	5, 116, 119, 157, 1023, 1168
SspI	AATATT	1 cut(s)	1615
SspMI	CTAG	3 cut(s)	416, 696, 1358
StuI	AGGCCT	1 cut(s)	1997
StyD4I	CCNGG	3 cut(s)	178, 179, 1677
StyI	CCWWGG	2 cut(s)	54, 717
TaaI	ACNGT	2 cut(s)	211, 1324
TaiI	ACGT	4 cut(s)	153, 1225, 1720, 1791
TaqI	TCGA	4 cut(s)	30, 36, 861, 1878
TaqII	GACCGA	1 cut(s)	65
TasI	AATT	7 cut(s)	283, 340, 617, 917, 1048, 1710, 1753
TatI	WGTACW	4 cut(s)	15, 680, 724, 1965
TauI	GCSGC	3 cut(s)	121, 1026, 1171
TfiI	GAWTC	5 cut(s)	175, 575, 987, 1211, 1361
Tru1I	TTAA	3 cut(s)	242, 923, 1935
Tru9I	TTAA	3 cut(s)	242, 923, 1935
TseFI	GTSAC	2 cut(s)	710, 1745
TseI	GCWGC	2 cut(s)	141, 1187
Tsp45I	GTSAC	2 cut(s)	710, 1745
TspDTI	ATGAA	7 cut(s)	597, 630, 753, 807, 1005, 1094, 1317
TspGWI	ACGGA	1 cut(s)	123
TspMI	CCCGGG	1 cut(s)	179
VpaK11BI	GGWCC	3 cut(s)	77, 1328, 1462
XagI	CCTNNNNNAGG	1 cut(s)	29
XapI	RAATTY	2 cut(s)	283, 617
XbaI	TCTAGA	1 cut(s)	1357
XceI	RCATGY	4 cut(s)	163, 1094, 1236, 1966
XmaI	CCCGGG	1 cut(s)	179
XmiI	GTMKAC	2 cut(s)	692, 1058
XmnI	GAANNNNTTC	1 cut(s)	1565
XspI	CTAG	3 cut(s)	416, 696, 1358
Zsp2I	ATGCAT	1 cut(s)	1108

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.